Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_485
Parameters: 2 7 7 80 10 50 1000
Length:  67331

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1027--1145
59
2.0
59
100
0
238
36
10
23
29
1.87
4966--5041
23
3.3
23
78
14
86
25
22
18
34
1.96
5025--5087
25
2.5
25
80
16
69
31
20
20
26
1.98
5218--5294
40
1.9
41
81
2
93
35
11
16
36
1.86
5211--5301
20
4.6
19
69
11
58
35
9
17
37
1.83
16763--16944
67
2.8
63
73
13
163
28
16
30
24
1.96
20843--21026
67
2.8
64
74
10
176
28
16
30
23
1.96
22726--22903
27
6.6
27
84
3
205
29
28
15
26
1.96
22747--22902
82
1.9
81
88
3
233
29
28
15
26
1.96
30917--31094
27
6.6
27
84
3
205
29
28
15
26
1.96
30938--31093
82
1.9
81
88
3
233
29
28
15
26
1.96
36760--36787
11
2.5
11
100
0
56
53
0
17
28
1.44
37908--38075
84
2.0
83
97
1
318
38
13
17
30
1.88
42828--42877
19
2.6
20
78
18
61
70
4
6
20
1.25
50935--51119
40
4.7
40
80
7
200
25
26
22
25
2.00
50935--51119
79
2.3
82
80
9
204
25
26
22
25
2.00
57899--58018
42
2.9
42
82
2
116
30
26
15
26
1.96
58049--58156
48
2.2
48
80
3
128
27
26
15
29
1.96
64745--64967
79
2.8
78
81
12
242
25
26
21
26
2.00
64745--64967
39
5.7
40
85
8
257
25
26
21
26
2.00
64745--64964
118
1.9
119
82
12
283
25
27
21
26
1.99

Tables:   1

The End!