Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: scaffold_1052
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 37500
ACGTcount: A:0.32, C:0.16, G:0.19, T:0.33
Found at i:206 original size:44 final size:46
Alignment explanation
Indices: 105--272 Score: 155
Period size: 50 Copynumber: 3.6 Consensus size: 46
95 TTATGAGAGC
* * *
105 CAGTGTAAGACCATGTCTAGGACATGGCATCGGCATTGAGACGAGTGT
1 CAGTGTAAGACCATGTCTGGGACAT-GAATCAGCA-TGAGACGAGTGT
*
153 CAGTGTAAGA-CATGTCTGGGACATGAATCAGC-TGCGA-GATGTGT
1 CAGTGTAAGACCATGTCTGGGACATGAATCAGCATGAGACGA-GTGT
* * * * *
197 CAGTGTAAGACCATGTCTGGGACATGGCATCTGCACGGATATGCGAGAG-
1 CAGTGTAAGACCATGTCTGGGACAT-GAATCAGCA-TGAGA--CGAGTGT
246 CTAGTGTAAGACCATGTCTGGGACATG
1 C-AGTGTAAGACCATGTCTGGGACATG
273 GCATCGGCCT
Statistics
Matches: 101, Mismatches: 10, Indels: 17
0.79 0.08 0.13
Matches are distributed among these distances:
43 2 0.02
44 18 0.18
45 14 0.14
46 12 0.12
47 13 0.13
48 12 0.12
49 2 0.02
50 26 0.26
51 2 0.02
ACGTcount: A:0.27, C:0.18, G:0.32, T:0.23
Consensus pattern (46 bp):
CAGTGTAAGACCATGTCTGGGACATGAATCAGCATGAGACGAGTGT
Found at i:3547 original size:43 final size:42
Alignment explanation
Indices: 3458--3566 Score: 130
Period size: 43 Copynumber: 2.6 Consensus size: 42
3448 GATTACGTGT
* * *
3458 AAGACCATATTTGGGATATGGCATCGATATGAGACTTCATGT
1 AAGACCATATCTGGGATATGGCATCGATACGAGACTTCATGC
* * *
3500 AAGACCATAGCTGGGCTATTGGCATCGATACGAGA-TTATATGC
1 AAGACCATATCTGGGATA-TGGCATCGATACGAGACTT-CATGC
*
3543 AAGACCATATCTGGGGTATGGCAT
1 AAGACCATATCTGGGATATGGCAT
3567 TAGTATGATA
Statistics
Matches: 57, Mismatches: 8, Indels: 4
0.83 0.12 0.06
Matches are distributed among these distances:
42 23 0.40
43 34 0.60
ACGTcount: A:0.30, C:0.17, G:0.26, T:0.28
Consensus pattern (42 bp):
AAGACCATATCTGGGATATGGCATCGATACGAGACTTCATGC
Found at i:9725 original size:39 final size:39
Alignment explanation
Indices: 9682--9838 Score: 242
Period size: 39 Copynumber: 4.0 Consensus size: 39
9672 AAAGATACTA
* *
9682 GAAATGTATCCGGGCTAAAGTCCAGCAGGCTTCGTGCTG
1 GAAATGTATCCAGGCTAAAGTCCCGCAGGCTTCGTGCTG
* *
9721 GAAATGTATCCGGGCTAAAGTCCCGTAGGCTTCGTGCTG
1 GAAATGTATCCAGGCTAAAGTCCCGCAGGCTTCGTGCTG
** *
9760 GAAATGTATCCAGGCTAAAGTCCCGTTGGCTTCGTGCAG
1 GAAATGTATCCAGGCTAAAGTCCCGCAGGCTTCGTGCTG
*
9799 GAAATGTATCCAGGCTAAAGTCCCGCAGGCTTTGTGCTG
1 GAAATGTATCCAGGCTAAAGTCCCGCAGGCTTCGTGCTG
9838 G
1 G
9839 TAATATAATT
Statistics
Matches: 109, Mismatches: 9, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
39 109 1.00
ACGTcount: A:0.22, C:0.23, G:0.30, T:0.25
Consensus pattern (39 bp):
GAAATGTATCCAGGCTAAAGTCCCGCAGGCTTCGTGCTG
Found at i:12110 original size:28 final size:28
Alignment explanation
Indices: 12074--12173 Score: 103
Period size: 28 Copynumber: 3.5 Consensus size: 28
12064 GTGAACATAG
12074 GCACTGTGTGTGCGAGTTCAGTAACCGA
1 GCACTGTGTGTGCGAGTTCAGTAACCGA
* * * ****
12102 GCATTGTGTGTGCCAGAT-AGGTTGTTGA
1 GCACTGTGTGTGCGAGTTCA-GTAACCGA
*
12130 GGCACTGTGTGTGCGAGTTCCGTAACCGA
1 -GCACTGTGTGTGCGAGTTCAGTAACCGA
12159 GCACTGTGTGTGCGA
1 GCACTGTGTGTGCGA
12174 CATCGATTGT
Statistics
Matches: 54, Mismatches: 15, Indels: 6
0.72 0.20 0.08
Matches are distributed among these distances:
27 1 0.02
28 34 0.63
29 19 0.35
ACGTcount: A:0.18, C:0.19, G:0.35, T:0.28
Consensus pattern (28 bp):
GCACTGTGTGTGCGAGTTCAGTAACCGA
Found at i:12141 original size:57 final size:57
Alignment explanation
Indices: 12072--12200 Score: 204
Period size: 57 Copynumber: 2.3 Consensus size: 57
12062 AAGTGAACAT
* * *
12072 AGGCACTGTGTGTGCGAGTTCAGTAACCGAGCATTGTGTGTGCCAGATAGGTTGTTG
1 AGGCACTGTGTGTGCGAGTTCAGTAACCGAGCACTGTGTGTGCCACATAGATTGTTG
* * *
12129 AGGCACTGTGTGTGCGAGTTCCGTAACCGAGCACTGTGTGTGCGACATCGATTGTTG
1 AGGCACTGTGTGTGCGAGTTCAGTAACCGAGCACTGTGTGTGCCACATAGATTGTTG
12186 AGGCACTGTGTGTGC
1 AGGCACTGTGTGTGC
12201 AAGATCGGTT
Statistics
Matches: 66, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
57 66 1.00
ACGTcount: A:0.18, C:0.19, G:0.35, T:0.29
Consensus pattern (57 bp):
AGGCACTGTGTGTGCGAGTTCAGTAACCGAGCACTGTGTGTGCCACATAGATTGTTG
Found at i:12142 original size:29 final size:29
Alignment explanation
Indices: 12106--12230 Score: 117
Period size: 29 Copynumber: 4.3 Consensus size: 29
12096 AACCGAGCAT
* *
12106 TGTGTGTGCCAGATAGGTTGTTGAGGCAC
1 TGTGTGTGCGAGATCGGTTGTTGAGGCAC
* * ****
12135 TGTGTGTGCGAGTTCCGTAACCGA-GCAC
1 TGTGTGTGCGAGATCGGTTGTTGAGGCAC
* *
12163 TGTGTGTGCGACATCGATTGTTGAGGCAC
1 TGTGTGTGCGAGATCGGTTGTTGAGGCAC
* *
12192 TGTGTGTGCAAGATCGGTTGTTGGGGCAC
1 TGTGTGTGCGAGATCGGTTGTTGAGGCAC
12221 TAAGTGTGTG
1 T--GTGTGTG
12231 AAATGAGATC
Statistics
Matches: 73, Mismatches: 20, Indels: 4
0.75 0.21 0.04
Matches are distributed among these distances:
28 20 0.27
29 46 0.63
31 7 0.10
ACGTcount: A:0.17, C:0.16, G:0.37, T:0.30
Consensus pattern (29 bp):
TGTGTGTGCGAGATCGGTTGTTGAGGCAC
Found at i:15061 original size:39 final size:39
Alignment explanation
Indices: 15016--15214 Score: 290
Period size: 39 Copynumber: 5.1 Consensus size: 39
15006 ATGCAAGATA
* * *
15016 CTGGAAATGTATTCGGGCTAAAGTCCCATAGGCTTTGTG
1 CTGGAAATGTATCCGGGCTAAAGTCCCGTAGGCTTCGTG
* *
15055 CTGGAAATGTATCCGGGCTAAAGTCCCGCAGGCTTCATG
1 CTGGAAATGTATCCGGGCTAAAGTCCCGTAGGCTTCGTG
*
15094 CTGGAAATGTATCCGGGCTAAAGTCTCGTAGGCTTCGTG
1 CTGGAAATGTATCCGGGCTAAAGTCCCGTAGGCTTCGTG
* *
15133 CTGGAAATGTATCCAGGCTAAAGTCCCGTTGGCTTCGTG
1 CTGGAAATGTATCCGGGCTAAAGTCCCGTAGGCTTCGTG
* * * *
15172 CAGGAAATGTATCCAGGCTAAAGTCCCGCAGGCTTTGTG
1 CTGGAAATGTATCCGGGCTAAAGTCCCGTAGGCTTCGTG
15211 CTGG
1 CTGG
15215 TAATATAATT
Statistics
Matches: 144, Mismatches: 16, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
39 144 1.00
ACGTcount: A:0.22, C:0.22, G:0.29, T:0.27
Consensus pattern (39 bp):
CTGGAAATGTATCCGGGCTAAAGTCCCGTAGGCTTCGTG
Found at i:20062 original size:38 final size:38
Alignment explanation
Indices: 19999--20099 Score: 139
Period size: 38 Copynumber: 2.6 Consensus size: 38
19989 ATTTGATGTG
*
19999 TATCCGGGTTTAAAGACCCGCAGGCTTCGTGCTGGTAAAA
1 TATCCGGG-TTAAA-TCCCGCAGGCTTCGTGCTGGTAAAA
**
20039 TATCCGGGTTAAATCCCGCAGGCTTCGTGCTGGTAGTA
1 TATCCGGGTTAAATCCCGCAGGCTTCGTGCTGGTAAAA
* *
20077 TATCCAGGATAAATCCCGCAGGC
1 TATCCGGGTTAAATCCCGCAGGC
20100 CTAGTACTGG
Statistics
Matches: 56, Mismatches: 5, Indels: 2
0.89 0.08 0.03
Matches are distributed among these distances:
38 43 0.77
39 5 0.09
40 8 0.14
ACGTcount: A:0.24, C:0.25, G:0.27, T:0.25
Consensus pattern (38 bp):
TATCCGGGTTAAATCCCGCAGGCTTCGTGCTGGTAAAA
Found at i:20110 original size:38 final size:38
Alignment explanation
Indices: 20015--20122 Score: 135
Period size: 38 Copynumber: 2.8 Consensus size: 38
20005 GGTTTAAAGA
* * *
20015 CCCGCAGGCTTCGTGCTGGTAAAATATCCGGGTTAAAT
1 CCCGCAGGCTTCGTGCTGGTAATATATCCAGGATAAAT
*
20053 CCCGCAGGCTTCGTGCTGGTAGTATATCCAGGATAAAT
1 CCCGCAGGCTTCGTGCTGGTAATATATCCAGGATAAAT
* * * * *
20091 CCCGCAGGCCTAGTACTGGTATTATATTCAGG
1 CCCGCAGGCTTCGTGCTGGTAATATATCCAGG
20123 CCTTCATGCC
Statistics
Matches: 61, Mismatches: 9, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
38 61 1.00
ACGTcount: A:0.23, C:0.24, G:0.26, T:0.27
Consensus pattern (38 bp):
CCCGCAGGCTTCGTGCTGGTAATATATCCAGGATAAAT
Found at i:20168 original size:43 final size:43
Alignment explanation
Indices: 20115--20269 Score: 256
Period size: 43 Copynumber: 3.6 Consensus size: 43
20105 ACTGGTATTA
*
20115 TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTAATGTG
1 TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTGATGTG
* * *
20158 TATTCGGGCCTTCGTGCCTAGCAGGCTTCATGCCGGTGATGTG
1 TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTGATGTG
*
20201 TATTCGGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTGATGTG
1 TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTGATGTG
*
20244 TATTCAGGCCTTCGTGCCTAGCAGGC
1 TATTCAGGCCTTCATGCCTAGCAGGC
20270 GTAATGCCGG
Statistics
Matches: 104, Mismatches: 8, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
43 104 1.00
ACGTcount: A:0.14, C:0.26, G:0.30, T:0.30
Consensus pattern (43 bp):
TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTGATGTG
Found at i:20260 original size:86 final size:86
Alignment explanation
Indices: 20115--20282 Score: 291
Period size: 86 Copynumber: 2.0 Consensus size: 86
20105 ACTGGTATTA
*
20115 TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTAATGTGTATTCGGGCCTTCGTGCCTAGC
1 TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTAATGTGTATTCAGGCCTTCGTGCCTAGC
* *
20180 AGGCTTCATGCCGGTGATGTG
66 AGGCGTAATGCCGGTGATGTG
* *
20201 TATTCGGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTGATGTGTATTCAGGCCTTCGTGCCTAGC
1 TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTAATGTGTATTCAGGCCTTCGTGCCTAGC
20266 AGGCGTAATGCCGGTGA
66 AGGCGTAATGCCGGTGA
20283 AATGATATGT
Statistics
Matches: 77, Mismatches: 5, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
86 77 1.00
ACGTcount: A:0.14, C:0.26, G:0.31, T:0.29
Consensus pattern (86 bp):
TATTCAGGCCTTCATGCCTAGCAGGCTTCGTGCCGGTAATGTGTATTCAGGCCTTCGTGCCTAGC
AGGCGTAATGCCGGTGATGTG
Found at i:24849 original size:11 final size:11
Alignment explanation
Indices: 24833--24864 Score: 64
Period size: 11 Copynumber: 2.9 Consensus size: 11
24823 GTAGAAAAAT
24833 TATTTTTATTA
1 TATTTTTATTA
24844 TATTTTTATTA
1 TATTTTTATTA
24855 TATTTTTATT
1 TATTTTTATT
24865 GTCTACACTT
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 21 1.00
ACGTcount: A:0.25, C:0.00, G:0.00, T:0.75
Consensus pattern (11 bp):
TATTTTTATTA
Found at i:27484 original size:39 final size:40
Alignment explanation
Indices: 27367--27591 Score: 219
Period size: 40 Copynumber: 5.7 Consensus size: 40
27357 GCTCCTCGTT
* *
27367 CAAATGCCTTCGGGACATAGCCTGG-TTATAGTAACTCGCA
1 CAAATGCCTTCGGGACTTAGCCCGGATT-TAGTAACTCGCA
*
27407 CAAATGCCTTCGGGACTTAACCCGGATTTAGTAACTCGCA
1 CAAATGCCTTCGGGACTTAGCCCGGATTTAGTAACTCGCA
* *
27447 CAAATGCCTTCGGG-CTTAGCCCGGAATTAGTATCTCGCA
1 CAAATGCCTTCGGGACTTAGCCCGGATTTAGTAACTCGCA
* * * * *
27486 CAAATGCCTTC-GGATCTTAGTCCGGATATGGTCACTTAGCA
1 CAAATGCCTTCGGGA-CTTAGCCCGGATTTAGTAAC-TCGCA
* * * * * *
27527 CAAA-GCCTTC-GGATCTTAGTCCGAATATGGTCACTTAGCA
1 CAAATGCCTTCGGGA-CTTAGCCCGGATTTAGTAAC-TCGCA
27567 CAAA-GCCTTCGGGACTTAGCCCGGA
1 CAAATGCCTTCGGGACTTAGCCCGGA
27592 CATCATTCAA
Statistics
Matches: 164, Mismatches: 16, Indels: 10
0.86 0.08 0.05
Matches are distributed among these distances:
38 2 0.01
39 33 0.20
40 116 0.71
41 13 0.08
ACGTcount: A:0.26, C:0.27, G:0.22, T:0.25
Consensus pattern (40 bp):
CAAATGCCTTCGGGACTTAGCCCGGATTTAGTAACTCGCA
Found at i:27511 original size:79 final size:81
Alignment explanation
Indices: 27367--27591 Score: 212
Period size: 79 Copynumber: 2.8 Consensus size: 81
27357 GCTCCTCGTT
* *
27367 CAAATGCCTTCGGGACATAGCCTGGTTATAGTAACTCGCACAAATGCCTTCGGGACTTAACCCGG
1 CAAATGCCTTCGGGACATAGCCCGGATATAGTAACTCGCACAAATGCCTTCGGGACTTAACCCGG
* *
27432 ATTTAGTAAC-TCGCA
66 ATATAGTAACTTAGCA
* * **
27447 CAAATGCCTTCGGG-CTTAGCCCGGA-ATTAGTATCTCGCACAAATGCCTTC-GGATCTTAGTCC
1 CAAATGCCTTCGGGACATAGCCCGGATA-TAGTAACTCGCACAAATGCCTTCGGGA-CTTAACCC
* *
27509 GGATATGGTCACTTAGCA
64 GGATATAGTAACTTAGCA
* * * * * * *
27527 CAAA-GCCTTC-GGATCTTAGTCCGAATATGGTCACTTAGCACAAA-GCCTTCGGGACTTAGCCC
1 CAAATGCCTTCGGGA-CATAGCCCGGATATAGTAAC-TCGCACAAATGCCTTCGGGACTTAACCC
27589 GGA
64 GGA
27592 CATCATTCAA
Statistics
Matches: 120, Mismatches: 17, Indels: 16
0.78 0.11 0.10
Matches are distributed among these distances:
78 6 0.05
79 51 0.43
80 51 0.43
81 12 0.10
ACGTcount: A:0.26, C:0.27, G:0.22, T:0.25
Consensus pattern (81 bp):
CAAATGCCTTCGGGACATAGCCCGGATATAGTAACTCGCACAAATGCCTTCGGGACTTAACCCGG
ATATAGTAACTTAGCA
Found at i:35404 original size:40 final size:40
Alignment explanation
Indices: 35360--35583 Score: 246
Period size: 40 Copynumber: 5.6 Consensus size: 40
35350 GCTCCTCGTT
*
35360 CAAATGCCTTCGGGACATAGCCCGGTTATAGTAACTCGCA
1 CAAATGCCTTCGGGACTTAGCCCGGTTATAGTAACTCGCA
*
35400 CAAATGCCTTCGGGACTTAACCCGGATT-TAGTAACTCGCA
1 CAAATGCCTTCGGGACTTAGCCCGG-TTATAGTAACTCGCA
* *
35440 CAAATGCCTTCGGG-CTTAGCCCGG-AATTAGTATCTCGCA
1 CAAATGCCTTCGGGACTTAGCCCGGTTA-TAGTAACTCGCA
* *
35479 CAAATGCCTTC-GGATCTTAGTCCGGATT-TAGTATCTCGCA
1 CAAATGCCTTCGGGA-CTTAGCCCGG-TTATAGTAACTCGCA
* * * * *
35519 CAAATGCCTTC-GGATCTTAGTCCGGATATGGTCACTTAGCA
1 CAAATGCCTTCGGGA-CTTAGCCCGGTTATAGTAAC-TCGCA
35560 CAAA-GCCTTCGGGACTTAGCCCGG
1 CAAATGCCTTCGGGACTTAGCCCGG
35584 ACATCGTTCA
Statistics
Matches: 161, Mismatches: 13, Indels: 20
0.83 0.07 0.10
Matches are distributed among these distances:
38 2 0.01
39 32 0.20
40 114 0.71
41 13 0.08
ACGTcount: A:0.25, C:0.27, G:0.22, T:0.26
Consensus pattern (40 bp):
CAAATGCCTTCGGGACTTAGCCCGGTTATAGTAACTCGCA
Found at i:35462 original size:79 final size:78
Alignment explanation
Indices: 35360--35584 Score: 274
Period size: 79 Copynumber: 2.8 Consensus size: 78
35350 GCTCCTCGTT
* *
35360 CAAATGCCTTCGGGACATAGCCCGGTTATAGTAACTCGCACAAATGCCTTCGGGACTTAACCCGG
1 CAAATGCCTTCGGG-CTTAGCCCGG-TATAGTAACTCGCACAAATGCCTTCGGGACTTAGCCCGG
35425 ATTTAGTAACTCGCA
64 ATTTAGTAACTCGCA
* * *
35440 CAAATGCCTTCGGGCTTAGCCCGGAATTAGTATCTCGCACAAATGCCTTC-GGATCTTAGTCCGG
1 CAAATGCCTTCGGGCTTAGCCCGGTA-TAGTAACTCGCACAAATGCCTTCGGGA-CTTAGCCCGG
*
35504 ATTTAGTATCTCGCA
64 ATTTAGTAACTCGCA
* * * * *
35519 CAAATGCCTTCGGATCTTAGTCCGGATATGGTCACTTAGCACAAA-GCCTTCGGGACTTAGCCCG
1 CAAATGCCTTCGG-GCTTAGCCCGG-TATAGTAAC-TCGCACAAATGCCTTCGGGACTTAGCCCG
35583 GA
63 GA
35585 CATCGTTCAA
Statistics
Matches: 125, Mismatches: 14, Indels: 12
0.83 0.09 0.08
Matches are distributed among these distances:
78 4 0.03
79 66 0.53
80 43 0.34
81 12 0.10
ACGTcount: A:0.25, C:0.27, G:0.22, T:0.26
Consensus pattern (78 bp):
CAAATGCCTTCGGGCTTAGCCCGGTATAGTAACTCGCACAAATGCCTTCGGGACTTAGCCCGGAT
TTAGTAACTCGCA
Found at i:35544 original size:119 final size:120
Alignment explanation
Indices: 35360--35584 Score: 298
Period size: 119 Copynumber: 1.9 Consensus size: 120
35350 GCTCCTCGTT
35360 CAAATGCCTTCGGGACATAGCCCGGTTATAGTAACTCGCACAAATGCCTTCGGGACTTAACCCGG
1 CAAATGCCTTCGGGACATAGCCCGGTTATAGTAACTCGCACAAATGCCTTCGGGACTTAACCCGG
* *
35425 ATTTAGTAAC-TCGCACAAATGCCTTCGGG-CTTAGCCCGGAATTAGTATCTCGCA
66 ATATAGTAACTTAGCACAAA-GCCTTCGGGACTTAGCCCGGAATTAGTATCTCGCA
* * * **
35479 CAAATGCCTTC-GGATCTTAGTCCGGATT-TAGTATCTCGCACAAATGCCTTC-GGATCTTAGTC
1 CAAATGCCTTCGGGA-CATAGCCCGG-TTATAGTAACTCGCACAAATGCCTTCGGGA-CTTAACC
* *
35541 CGGATATGGTCACTTAGCACAAAGCCTTCGGGACTTAGCCCGGA
63 CGGATATAGTAACTTAGCACAAAGCCTTCGGGACTTAGCCCGGA
35585 CATCGTTCAA
Statistics
Matches: 92, Mismatches: 9, Indels: 9
0.84 0.08 0.08
Matches are distributed among these distances:
118 6 0.07
119 65 0.71
120 21 0.23
ACGTcount: A:0.25, C:0.27, G:0.22, T:0.26
Consensus pattern (120 bp):
CAAATGCCTTCGGGACATAGCCCGGTTATAGTAACTCGCACAAATGCCTTCGGGACTTAACCCGG
ATATAGTAACTTAGCACAAAGCCTTCGGGACTTAGCCCGGAATTAGTATCTCGCA
Done.