Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: CP032246.1 Gossypioides kirkii chromosome KI_03
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 42061019
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 2000 characters in sequence are not A, C, G, or T
File 14 of 135
Found at i:3782127 original size:17 final size:16
Alignment explanation
Indices: 3782066--3782128 Score: 72
Period size: 17 Copynumber: 3.8 Consensus size: 16
3782056 CTTTTCTTTA
*
3782066 TAAATTTATAATAATAT
1 TAAATTTAAAATAA-AT
*
3782083 TAAATTTAAATTAAAT
1 TAAATTTAAAATAAAT
3782099 TCAAATTTAAAATAAAT
1 T-AAATTTAAAATAAAT
*
3782116 TTAATTTCAAAAT
1 TAAATTT-AAAAT
3782129 GGTTTGGGCC
Statistics
Matches: 40, Mismatches: 4, Indels: 4
0.83 0.08 0.08
Matches are distributed among these distances:
16 8 0.20
17 32 0.80
ACGTcount: A:0.54, C:0.03, G:0.00, T:0.43
Consensus pattern (16 bp):
TAAATTTAAAATAAAT
Found at i:3782524 original size:91 final size:91
Alignment explanation
Indices: 3782369--3783686 Score: 2059
Period size: 91 Copynumber: 14.6 Consensus size: 91
3782359 AAGTAGGGTT
* * * *
3782369 TGATGTCGGGGCTTCATCATACTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
* *
3782434 TACTATAACTTCAAGAGGACAGGAAA
66 TACTACAACTTCAAGAGGATAGGAAA
* * *
3782460 TGATGTTGATGCTTCATCTTGCTTTTGCTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
3782525 TACTACAACTTCAAGAGGATAGGAAA
66 TACTACAACTTCAAGAGGATAGGAAA
* * *
3782551 TGATGTCGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGAAAAAGAC-TGCTATCCAGCTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
3782615 TACTACAACTTCAAGAGGATAGGAAA
66 TACTACAACTTCAAGAGGATAGGAAA
* *
3782641 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTACTATCCAGCTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
3782706 TACTACAACTTCAAGAGGATAGGAAA
66 TACTACAACTTCAAGAGGATAGGAAA
* * *
3782732 TGATGTTGGTGCTTCGTCTTGCTCTTACTATAACTTCAGAGAGATAAAGACTTACTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
*
3782797 TACTACAACTTCAAGAGGATAGGAAT
66 TACTACAACTTCAAGAGGATAGGAAA
* * * *
3782823 TGATGTTTGATGCTTCATCTAGCTCTTACTATAACTTCAAAGAGATAAAGACTTGCTATCCAACT
1 TGATG-TTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACT
3782888 TTACTACAACTTCAAGAGGATAGGAAA
65 TTACTACAACTTCAAGAGGATAGGAAA
* * * *
3782915 TGATGTCGGTGCTTCATCTTGCCCTTACTACAACTTTAGAGAGATAAAGACTTGCTATCCAGCTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
*
3782980 TACTACAACTTCAAGAGGATAGAAAA
66 TACTACAACTTCAAGAGGATAGGAAA
* * *
3783006 TGATGTTGGTGCTTCATCTTGCTTTTACTACAACTTCAGAGAGATAAAGACTTACTATCCAGCTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
3783071 TACTACAACTTCAAGAGGATAGGAAA
66 TACTACAACTTCAAGAGGATAGGAAA
*
3783097 TGATGTTGGTGCTTCATCTTGCTCTTATTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
*
3783162 TACTACAACTTCAAGAGGATAGGAAT
66 TACTACAACTTCAAGAGGATAGGAAA
* * *
3783188 TGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCAGAGAGATAAAGACTTACTATCCAACT
1 TGATG-TTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACT
3783253 TTACTACAACTTCAAGAGGATAGGAAA
65 TTACTACAACTTCAAGAGGATAGGAAA
* * *
3783280 TGATGTCGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAAACTTGCTATCCAGCTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
*
3783345 GACTACAACTTCAAGAGGATAGGAAA
66 TACTACAACTTCAAGAGGATAGGAAA
* *
3783371 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTACTATCCAGCTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
3783436 TACTACAA--T----AGGATAGG-AA
66 TACTACAACTTCAAGAGGATAGGAAA
* *
3783455 T--TGAT-GT--TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGATTTGCTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
* *
3783515 TACTACAACTTCAAGAGGATAAGAAT
66 TACTACAACTTCAAGAGGATAGGAAA
* * *
3783541 TGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCAAAGAGATAAAGACTTGCTATCCAACT
1 TGATG-TTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACT
3783606 TTACTACAACTTCAAGAGGATAGGAAA
65 TTACTACAACTTCAAGAGGATAGGAAA
* *
3783633 TGATGTTTGATGCTTCATCTTGCTCTTACTACAACTTTAGAGAGATAAAGACTT
1 TGATG-TTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTT
3783687 AGTATTTTGA
Statistics
Matches: 1131, Mismatches: 80, Indels: 31
0.91 0.06 0.02
Matches are distributed among these distances:
79 58 0.05
81 3 0.00
82 3 0.00
84 3 0.00
85 15 0.01
86 2 0.00
88 2 0.00
89 2 0.00
90 88 0.08
91 659 0.58
92 296 0.26
ACGTcount: A:0.32, C:0.19, G:0.17, T:0.31
Consensus pattern (91 bp):
TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
TACTACAACTTCAAGAGGATAGGAAA
Found at i:3782980 original size:274 final size:273
Alignment explanation
Indices: 3782369--3783686 Score: 2059
Period size: 274 Copynumber: 4.9 Consensus size: 273
3782359 AAGTAGGGTT
* * *
3782369 TGATGTCGGGGCTTCATCATACTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
1 TGATGTCGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
* * * * *
3782434 TACTATAACTTCAAGAGGACAGGAAATGATGTTGATGCTTCATCTTGCTTTTGCTACAACTTCAG
66 TACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAG
*
3782499 AGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGCT
131 AGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCT
* *
3782564 TCATCTTGCTCTTACTACAACTTCAGAGAGAAAAAGAC-TGCTATCCAGCTTTACTACAACTTCA
196 TCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCA
3782628 AGAGGATAGGAAA
261 AGAGGATAGGAAA
* * *
3782641 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTACTATCCAGCTT
1 TGATGTCGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
* *
3782706 TACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCTTCGTCTTGCTCTTACTATAACTTCAG
66 TACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAG
* * *
3782771 AGAGATAAAGACTTACTATCCAACTTTACTACAACTTCAAGAGGATAGGAATTGATGTTTGATGC
131 AGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATG-TTGGTGC
* * *
3782836 TTCATCTAGCTCTTACTATAACTTCAAAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTC
195 TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTC
3782901 AAGAGGATAGGAAA
260 AAGAGGATAGGAAA
* * *
3782915 TGATGTCGGTGCTTCATCTTGCCCTTACTACAACTTTAGAGAGATAAAGACTTGCTATCCAGCTT
1 TGATGTCGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
* *
3782980 TACTACAACTTCAAGAGGATAGAAAATGATGTTGGTGCTTCATCTTGCTTTTACTACAACTTCAG
66 TACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAG
* *
3783045 AGAGATAAAGACTTACTATCCAGCTTTACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCT
131 AGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCT
*
3783110 TCATCTTGCTCTTATTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCA
196 TCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCA
*
3783175 AGAGGATAGGAAT
261 AGAGGATAGGAAA
* * * *
3783188 TGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCAGAGAGATAAAGACTTACTATCCAACT
1 TGATG-TCGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACT
*
3783253 TTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGCTTCATCTTGCTCTTACTACAACTTCA
65 TTACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCA
* * *
3783318 GAGAGATAAAAACTTGCTATCCAGCTTGACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGC
130 GAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGC
* *
3783383 TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTACTATCCAGCTTTACTACAA--T-
195 TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTC
*
3783445 ---AGGATAGGAAT
260 AAGAGGATAGGAAA
*
3783456 TGA--T--GT--TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGATTTGCTATCCAACTT
1 TGATGTCGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
* * * *
3783515 TACTACAACTTCAAGAGGATAAGAATTGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCA
66 TACTACAACTTCAAGAGGATAGGAAATGATG-TTGGTGCTTCATCTTGCTCTTACTACAACTTCA
* *
3783580 AAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTTTGATG
130 GAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATG-TTGGTG
*
3783645 CTTCATCTTGCTCTTACTACAACTTTAGAGAGATAAAGACTT
194 CTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTT
3783687 AGTATTTTGA
Statistics
Matches: 972, Mismatches: 69, Indels: 19
0.92 0.07 0.02
Matches are distributed among these distances:
261 79 0.08
262 84 0.09
263 47 0.05
265 1 0.00
268 14 0.01
272 173 0.18
273 125 0.13
274 449 0.46
ACGTcount: A:0.32, C:0.19, G:0.17, T:0.31
Consensus pattern (273 bp):
TGATGTCGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
TACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAG
AGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTTGGTGCT
TCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCA
AGAGGATAGGAAA
Found at i:3783090 original size:365 final size:365
Alignment explanation
Indices: 3782369--3783686 Score: 2250
Period size: 365 Copynumber: 3.6 Consensus size: 365
3782359 AAGTAGGGTT
* * * *
3782369 TGATGTCGGGGCTTCATCATACTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
* * * * * *
3782434 TACTATAACTTCAAGAGGACAGGAAATGATG-TTGATGCTTCATCTTGCTTTTGCTACAACTTCA
66 TACTACAACTTCAAGAGGATAGGAATTGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCA
*
3782498 GAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGC
131 AAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGC
*
3782563 TTCATCTTGCTCTTACTACAACTTCAGAGAGAAAAAGAC-TGCTATCCAGCTTTACTACAACTTC
196 TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAGCTTTACTACAACTTC
3782627 AAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGAC
261 AAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGAC
3782692 TTACTATCCAGCTTTACTACAACTTCAAGAGGATAGGAAA
326 TTACTATCCAGCTTTACTACAACTTCAAGAGGATAGGAAA
* * *
3782732 TGATGTTGGTGCTTCGTCTTGCTCTTACTATAACTTCAGAGAGATAAAGACTTACTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
*
3782797 TACTACAACTTCAAGAGGATAGGAATTGATGTTTGATGCTTCATCTAGCTCTTACTATAACTTCA
66 TACTACAACTTCAAGAGGATAGGAATTGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCA
3782862 AAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGC
131 AAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGC
* *
3782927 TTCATCTTGCCCTTACTACAACTTTAGAGAGATAAAGACTTGCTATCCAGCTTTACTACAACTTC
196 TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAGCTTTACTACAACTTC
* *
3782992 AAGAGGATAGAAAATGATGTTGGTGCTTCATCTTGCTTTTACTACAACTTCAGAGAGATAAAGAC
261 AAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGAC
3783057 TTACTATCCAGCTTTACTACAACTTCAAGAGGATAGGAAA
326 TTACTATCCAGCTTTACTACAACTTCAAGAGGATAGGAAA
*
3783097 TGATGTTGGTGCTTCATCTTGCTCTTATTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
3783162 TACTACAACTTCAAGAGGATAGGAATTGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCA
66 TACTACAACTTCAAGAGGATAGGAATTGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCA
* *
3783227 GAGAGATAAAGACTTACTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGC
131 AAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGC
* *
3783292 TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAAACTTGCTATCCAGCTTGACTACAACTTC
196 TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAGCTTTACTACAACTTC
3783357 AAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGAC
261 AAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGAC
3783422 TTACTATCCAGCTTTACTACAA--T----AGGATAGG-AA
326 TTACTATCCAGCTTTACTACAACTTCAAGAGGATAGGAAA
* *
3783455 T--TGAT-GT--TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGATTTGCTATCCAACTT
1 TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
*
3783515 TACTACAACTTCAAGAGGATAAGAATTGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCA
66 TACTACAACTTCAAGAGGATAGGAATTGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCA
* *
3783580 AAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTTTGATG
131 AAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATG-TCGGTG
*
3783645 CTTCATCTTGCTCTTACTACAACTTTAGAGAGATAAAGACTT
195 CTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTT
3783687 AGTATTTTGA
Statistics
Matches: 909, Mismatches: 43, Indels: 15
0.94 0.04 0.02
Matches are distributed among these distances:
353 171 0.19
354 44 0.05
355 2 0.00
356 3 0.00
358 3 0.00
359 8 0.01
363 87 0.10
364 129 0.14
365 462 0.51
ACGTcount: A:0.32, C:0.19, G:0.17, T:0.31
Consensus pattern (365 bp):
TGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAACTT
TACTACAACTTCAAGAGGATAGGAATTGATGTTTGATGCTTCATCTAGCTCTTACTACAACTTCA
AAGAGATAAAGACTTGCTATCCAACTTTACTACAACTTCAAGAGGATAGGAAATGATGTCGGTGC
TTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGACTTGCTATCCAGCTTTACTACAACTTC
AAGAGGATAGGAAATGATGTTGGTGCTTCATCTTGCTCTTACTACAACTTCAGAGAGATAAAGAC
TTACTATCCAGCTTTACTACAACTTCAAGAGGATAGGAAA
Found at i:3785264 original size:18 final size:17
Alignment explanation
Indices: 3785238--3785306 Score: 52
Period size: 18 Copynumber: 3.9 Consensus size: 17
3785228 TCCTTTCTAG
*
3785238 TTTGTTTTTCTTCTTGTT-
1 TTTGCTTTTCTT-TT-TTA
*
3785256 TTTGCTTTTCTTTTTTC
1 TTTGCTTTTCTTTTTTA
*
3785273 TTT-CTCTTCTTTTTTTA
1 TTTGCTTTTC-TTTTTTA
*
3785290 TTTGTTTTTCTTCTTTT
1 TTTGCTTTTCTT-TTTT
3785307 GTATCTGAGT
Statistics
Matches: 42, Mismatches: 5, Indels: 8
0.76 0.09 0.15
Matches are distributed among these distances:
16 7 0.17
17 16 0.38
18 19 0.45
ACGTcount: A:0.01, C:0.14, G:0.06, T:0.78
Consensus pattern (17 bp):
TTTGCTTTTCTTTTTTA
Found at i:3785266 original size:31 final size:30
Alignment explanation
Indices: 3785231--3785288 Score: 71
Period size: 31 Copynumber: 1.9 Consensus size: 30
3785221 CGACCTCTCC
* *
3785231 TTTCTAGTTTGTTTTTCTTCTTGTTTTTGCT
1 TTTCTAGTTTCTTTCTCTTCTT-TTTTTGCT
**
3785262 TTTCTTTTTTCTTTCTCTTCTTTTTTT
1 TTTCTAGTTTCTTTCTCTTCTTTTTTT
3785289 ATTTGTTTTT
Statistics
Matches: 23, Mismatches: 4, Indels: 1
0.82 0.14 0.04
Matches are distributed among these distances:
30 5 0.22
31 18 0.78
ACGTcount: A:0.02, C:0.16, G:0.07, T:0.76
Consensus pattern (30 bp):
TTTCTAGTTTCTTTCTCTTCTTTTTTTGCT
Found at i:3785301 original size:21 final size:21
Alignment explanation
Indices: 3785260--3785306 Score: 60
Period size: 21 Copynumber: 2.2 Consensus size: 21
3785250 CTTGTTTTTG
3785260 CTTTTCTTTTTTCTTTCTCTT
1 CTTTTCTTTTTTCTTTCTCTT
* *
3785281 CTTTT-TTTATTTGTTTTTCTT
1 CTTTTCTTT-TTTCTTTCTCTT
3785302 CTTTT
1 CTTTT
3785307 GTATCTGAGT
Statistics
Matches: 23, Mismatches: 2, Indels: 2
0.85 0.07 0.07
Matches are distributed among these distances:
20 3 0.13
21 20 0.87
ACGTcount: A:0.02, C:0.17, G:0.02, T:0.79
Consensus pattern (21 bp):
CTTTTCTTTTTTCTTTCTCTT
Found at i:3786079 original size:17 final size:14
Alignment explanation
Indices: 3786055--3786097 Score: 59
Period size: 14 Copynumber: 2.9 Consensus size: 14
3786045 TCACTCCTTT
3786055 TTTTGTTTTTTGTTG
1 TTTTGTTTTTT-TTG
3786070 TTTGTTGTTTTTTTTG
1 -TT-TTGTTTTTTTTG
3786086 TTTTGTTTTTTT
1 TTTTGTTTTTTT
3786098 AAATACTTTT
Statistics
Matches: 26, Mismatches: 0, Indels: 4
0.87 0.00 0.13
Matches are distributed among these distances:
14 10 0.38
15 2 0.08
16 5 0.19
17 9 0.35
ACGTcount: A:0.00, C:0.00, G:0.16, T:0.84
Consensus pattern (14 bp):
TTTTGTTTTTTTTG
Found at i:3786137 original size:11 final size:12
Alignment explanation
Indices: 3786123--3786157 Score: 54
Period size: 11 Copynumber: 2.9 Consensus size: 12
3786113 TTTTCAACCC
3786123 TTTTTTGTTTT-
1 TTTTTTGTTTTA
3786134 TTTTTTGTGTTTA
1 TTTTTTGT-TTTA
3786147 TTTTTTGTTTT
1 TTTTTTGTTTT
3786158 GTTGATAACA
Statistics
Matches: 22, Mismatches: 0, Indels: 3
0.88 0.00 0.12
Matches are distributed among these distances:
11 8 0.36
12 6 0.27
13 8 0.36
ACGTcount: A:0.03, C:0.00, G:0.11, T:0.86
Consensus pattern (12 bp):
TTTTTTGTTTTA
Found at i:3789485 original size:18 final size:20
Alignment explanation
Indices: 3789445--3789490 Score: 60
Period size: 18 Copynumber: 2.4 Consensus size: 20
3789435 ATTGAAAAGT
*
3789445 AAAAGAACACGAGCATAATA
1 AAAAGAACACGAGCATAAAA
*
3789465 AAAAGTACA-GAG-ATAAAA
1 AAAAGAACACGAGCATAAAA
3789483 AAAAGAAC
1 AAAAGAAC
3789491 CTAGACTTGG
Statistics
Matches: 23, Mismatches: 3, Indels: 2
0.82 0.11 0.07
Matches are distributed among these distances:
18 12 0.52
19 3 0.13
20 8 0.35
ACGTcount: A:0.65, C:0.11, G:0.15, T:0.09
Consensus pattern (20 bp):
AAAAGAACACGAGCATAAAA
Found at i:3791094 original size:59 final size:58
Alignment explanation
Indices: 3790835--3791111 Score: 267
Period size: 58 Copynumber: 4.8 Consensus size: 58
3790825 GGATACCTGG
* * * * ** *
3790835 GGGTAAAATGATAATTTTGGTTGAAAT--TGGGTCAAAAACGGGATTTTGGAAAGTTCGG
1 GGGTAAAATGGTAATTTTGG-TGAAATCGAGGGT-AAAAATGGAATTTTAAAAAGTTCGA
* * * *
3790893 GGGTAAAATGGTAATTTTTGGTAAAATCGA-GTTTAAAATGGAATTTTAAAAAGTTTGA
1 GGGTAAAATGGTAA-TTTTGGTGAAATCGAGGGTAAAAATGGAATTTTAAAAAGTTCGA
*** * * *
3790951 GAAAAAAAATGGCAATTTTGGTGAAATCGGGGGCAAAAATGGAA-TTTAAAAAGTTCGA
1 G-GGTAAAATGGTAATTTTGGTGAAATCGAGGGTAAAAATGGAATTTTAAAAAGTTCGA
* * *
3791009 GGGTAAAATGGTAATTTTGGTGAAATCGAGGGTAAAAATGAAATTTTAGAAAGTTCGG
1 GGGTAAAATGGTAATTTTGGTGAAATCGAGGGTAAAAATGGAATTTTAAAAAGTTCGA
* * *
3791067 GTGGTAAAATGATAATTTTGGTAAAATCGA-GGTCAAAATGGAATT
1 G-GGTAAAATGGTAATTTTGGTGAAATCGAGGGTAAAAATGGAATT
3791112 ATGGAAAACT
Statistics
Matches: 178, Mismatches: 34, Indels: 14
0.79 0.15 0.06
Matches are distributed among these distances:
57 35 0.20
58 90 0.51
59 53 0.30
ACGTcount: A:0.39, C:0.04, G:0.27, T:0.30
Consensus pattern (58 bp):
GGGTAAAATGGTAATTTTGGTGAAATCGAGGGTAAAAATGGAATTTTAAAAAGTTCGA
Found at i:3791104 original size:29 final size:29
Alignment explanation
Indices: 3791005--3791106 Score: 102
Period size: 29 Copynumber: 3.5 Consensus size: 29
3790995 TTTAAAAAGT
* *
3791005 TCGAGGGTAAAATGGTAATTTTGGTGAAA
1 TCGAGGGTAAAATGATAATTTTGGTAAAA
* *
3791034 TCGAGGGTAAAAATGA-AATTTTAG-AAAGT
1 TCGAGGGT-AAAATGATAATTTTGGTAAA-A
*
3791063 TCGGGTGGTAAAATGATAATTTTGGTAAAA
1 TCGAG-GGTAAAATGATAATTTTGGTAAAA
3791093 TCGA-GGTCAAAATG
1 TCGAGGGT-AAAATG
3791107 GAATTATGGA
Statistics
Matches: 59, Mismatches: 8, Indels: 12
0.75 0.10 0.15
Matches are distributed among these distances:
28 5 0.08
29 32 0.54
30 19 0.32
31 3 0.05
ACGTcount: A:0.38, C:0.05, G:0.27, T:0.29
Consensus pattern (29 bp):
TCGAGGGTAAAATGATAATTTTGGTAAAA
Found at i:3791129 original size:116 final size:116
Alignment explanation
Indices: 3790836--3791134 Score: 311
Period size: 116 Copynumber: 2.6 Consensus size: 116
3790826 GATACCTGGG
* * *
3790836 GGTAAAATGATAATTTTGGTTGAAATTGGGTCAAAAACGGGATTTTGG-AAAGTTCGGGGGTAAA
1 GGTAAAATGATAATTTTGG-TGAAATCGGGTCAAAAA-TGGAATTTGGAAAAGTTCGGGGGTAAA
* * * *
3790900 ATGGTAATTTTTGGTAAAATCGAGTTTAAAATGGAATTTTAAAAAGTTTGAGA
64 ATGGTAATTTTTGGTAAAATCGAGGTAAAAATGAAATTTTAAAAAGTTCGAGA
*** ** * * *
3790953 AAAAAAATGGCAATTTTGGTGAAATCGGGGGCAAAAATGGAATTT-AAAAAGTTCGAGGGTAAAA
1 GGTAAAATGATAATTTTGGTGAAATC-GGGTCAAAAATGGAATTTGGAAAAGTTCGGGGGTAAAA
* * * *
3791017 TGGTAA-TTTTGGTGAAATCGAGGGTAAAAATGAAATTTTAGAAAGTTCGGGT
65 TGGTAATTTTTGGTAAAATCGA-GGTAAAAATGAAATTTTAAAAAGTTCGAGA
* *
3791069 GGTAAAATGATAATTTTGGTAAAATCGAGGTC-AAAATGGAATTATGGAAAACTT-GGGGGTAGA
1 GGTAAAATGATAATTTTGGTGAAATCG-GGTCAAAAATGGAATT-TGGAAAAGTTCGGGGGTA-A
3791132 AAT
63 AAT
3791135 TTATTTTTAG
Statistics
Matches: 146, Mismatches: 29, Indels: 14
0.77 0.15 0.07
Matches are distributed among these distances:
115 26 0.18
116 87 0.60
117 33 0.23
ACGTcount: A:0.39, C:0.04, G:0.27, T:0.29
Consensus pattern (116 bp):
GGTAAAATGATAATTTTGGTGAAATCGGGTCAAAAATGGAATTTGGAAAAGTTCGGGGGTAAAAT
GGTAATTTTTGGTAAAATCGAGGTAAAAATGAAATTTTAAAAAGTTCGAGA
Found at i:3791179 original size:30 final size:29
Alignment explanation
Indices: 3791145--3791380 Score: 192
Period size: 30 Copynumber: 7.9 Consensus size: 29
3791135 TTATTTTTAG
3791145 AAAGTTTTAAGGTTAAAATATAATTTTAAA
1 AAAG-TTTAAGGTTAAAATATAATTTTAAA
* * **
3791175 AAAGTTTAGGGGTCAAAATATAATTTT-GG
1 AAAGTTTA-AGGTTAAAATATAATTTTAAA
* *
3791204 AAAGATTAAGGGGTTAAAATGTAA-TTTATAA
1 AAAGTTTAA--GGTTAAAATATAATTTTA-AA
**
3791235 AAAGTTTTAAGGTTAAAATATAATTTTGGA
1 AAAG-TTTAAGGTTAAAATATAATTTTAAA
*
3791265 AAAGTTTAAGGGTTAAAATGTAA-TTTATAA
1 AAAGTTTAA-GGTTAAAATATAATTTTA-AA
**
3791295 AAAGTTTTAAGGTTAAAATATAATTTTGGA
1 AAAG-TTTAAGGTTAAAATATAATTTTAAA
* * *
3791325 AAAGTTTAGGGGTT-AAATGTAATTTTCAA
1 AAAGTTTA-AGGTTAAAATATAATTTTAAA
** *
3791354 AAAGTTTTGGGGTTGAAATATAATTTT
1 AAAG-TTTAAGGTTAAAATATAATTTT
3791381 TGGATAGTTT
Statistics
Matches: 166, Mismatches: 26, Indels: 28
0.75 0.12 0.13
Matches are distributed among these distances:
29 47 0.28
30 100 0.60
31 15 0.09
32 4 0.02
ACGTcount: A:0.43, C:0.01, G:0.18, T:0.38
Consensus pattern (29 bp):
AAAGTTTAAGGTTAAAATATAATTTTAAA
Found at i:3791249 original size:90 final size:89
Alignment explanation
Indices: 3791145--3791380 Score: 264
Period size: 90 Copynumber: 2.6 Consensus size: 89
3791135 TTATTTTTAG
* **
3791145 AAAGTTTTAAGGTTAAAATATAATTTTAAAAAAGTTTAGGGGTCAAAATATAATTTTGGAAAG-A
1 AAAGTTTTAAGGTTAAAATATAATTTTAAAAAAGTTTAGGGGTTAAAATATAATTTTAAAAAGTA
*
3791209 TTAAGGGGTTAAAATGTAATTTAT-AA
66 TTAA--GGTTAAAATATAATTT-TGAA
** * *
3791235 AAAGTTTTAAGGTTAAAATATAATTTTGGAAAAGTTTAAGGGTTAAAATGTAATTTATAAAAAGT
1 AAAGTTTTAAGGTTAAAATATAATTTTAAAAAAGTTTAGGGGTTAAAATATAATTT-TAAAAAGT
* *
3791300 TTTAAGGTTAAAATATAATTTTGGA
65 ATTAAGGTTAAAATATAATTTTGAA
* * * * *
3791325 AAAG-TTTAGGGGTT-AAATGTAATTTTCAAAAAGTTTTGGGGTTGAAATATAATTTT
1 AAAGTTTTA-AGGTTAAAATATAATTTTAAAAAAGTTTAGGGGTTAAAATATAATTTT
3791381 TGGATAGTTT
Statistics
Matches: 124, Mismatches: 18, Indels: 10
0.82 0.12 0.07
Matches are distributed among these distances:
88 1 0.01
89 39 0.31
90 75 0.60
91 5 0.04
92 4 0.03
ACGTcount: A:0.43, C:0.01, G:0.18, T:0.38
Consensus pattern (89 bp):
AAAGTTTTAAGGTTAAAATATAATTTTAAAAAAGTTTAGGGGTTAAAATATAATTTTAAAAAGTA
TTAAGGTTAAAATATAATTTTGAA
Found at i:3791382 original size:60 final size:59
Alignment explanation
Indices: 3791155--3791394 Score: 308
Period size: 60 Copynumber: 4.0 Consensus size: 59
3791145 AAAGTTTTAA
* * * *
3791155 GGTTAAAATATAATTT-TAAAAAAG-TTTAGGGGTCAAAATATAATTTTGGAAAGATTAAGG
1 GGTTAAAATGTAATTTAT-AAAAAGTTTTA-AGGTTAAAATATAATTTTGGAAAG-TTTAGG
*
3791215 GGTTAAAATGTAATTTATAAAAAGTTTTAAGGTTAAAATATAATTTTGGAAAAGTTTAAG
1 GGTTAAAATGTAATTTATAAAAAGTTTTAAGGTTAAAATATAATTTTGG-AAAGTTTAGG
3791275 GGTTAAAATGTAATTTATAAAAAGTTTTAAGGTTAAAATATAATTTTGGAAAAGTTTAGG
1 GGTTAAAATGTAATTTATAAAAAGTTTTAAGGTTAAAATATAATTTTGG-AAAGTTTAGG
** * *
3791335 GGTT-AAATGTAATTT-TCAAAAAGTTTTGGGGTTGAAATATAATTTTTGGATAGTTTAGG
1 GGTTAAAATGTAATTTAT-AAAAAGTTTTAAGGTTAAAATATAA-TTTTGGAAAGTTTAGG
3791394 G
1 G
3791395 ATTTTTAAGG
Statistics
Matches: 165, Mismatches: 10, Indels: 11
0.89 0.05 0.06
Matches are distributed among these distances:
58 1 0.01
59 43 0.26
60 112 0.68
61 9 0.05
ACGTcount: A:0.41, C:0.01, G:0.20, T:0.38
Consensus pattern (59 bp):
GGTTAAAATGTAATTTATAAAAAGTTTTAAGGTTAAAATATAATTTTGGAAAGTTTAGG
Found at i:3794014 original size:27 final size:27
Alignment explanation
Indices: 3793983--3794037 Score: 83
Period size: 27 Copynumber: 2.0 Consensus size: 27
3793973 ATTTTTTTTA
*
3793983 ATTTAGAGTTAAATTGATTTTAAATTT
1 ATTTAAAGTTAAATTGATTTTAAATTT
* *
3794010 ATTTAAATTTAAATTTATTTTAAATTT
1 ATTTAAAGTTAAATTGATTTTAAATTT
3794037 A
1 A
3794038 AATTTAATTA
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.40, C:0.00, G:0.05, T:0.55
Consensus pattern (27 bp):
ATTTAAAGTTAAATTGATTTTAAATTT
Found at i:3794019 original size:6 final size:6
Alignment explanation
Indices: 3794001--3794100 Score: 91
Period size: 6 Copynumber: 16.8 Consensus size: 6
3793991 TTAAATTGAT
*
3794001 TTTAAA TTT--A TTTAAA TTTAAA TTT-AT TTTAAA TTTAAA TTTAATTA
1 TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAA--A
* * ** *
3794048 TTTAAA TTT-AC TTTGAA TTTAAA TTTAAA TAAAAA TTAAAA TATTAAA
1 TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA T-TTAAA
3794096 TTTAA
1 TTTAA
3794101 CATTAAAAAT
Statistics
Matches: 78, Mismatches: 9, Indels: 14
0.77 0.09 0.14
Matches are distributed among these distances:
4 4 0.05
5 8 0.10
6 55 0.71
7 5 0.06
8 6 0.08
ACGTcount: A:0.47, C:0.01, G:0.01, T:0.51
Consensus pattern (6 bp):
TTTAAA
Found at i:3794019 original size:17 final size:17
Alignment explanation
Indices: 3794001--3794074 Score: 93
Period size: 17 Copynumber: 4.6 Consensus size: 17
3793991 TTAAATTGAT
3794001 TTTAAATTTA-TTTAAA
1 TTTAAATTTACTTTAAA
*
3794017 TTTAAATTTATTTTAAA
1 TTTAAATTTACTTTAAA
*
3794034 TTTAAATTTA-ATT--A
1 TTTAAATTTACTTTAAA
*
3794048 TTTAAATTTACTTTGAA
1 TTTAAATTTACTTTAAA
3794065 TTTAAATTTA
1 TTTAAATTTA
3794075 AATAAAAATT
Statistics
Matches: 52, Mismatches: 2, Indels: 7
0.85 0.03 0.11
Matches are distributed among these distances:
14 11 0.21
15 2 0.04
16 12 0.23
17 27 0.52
ACGTcount: A:0.41, C:0.01, G:0.01, T:0.57
Consensus pattern (17 bp):
TTTAAATTTACTTTAAA
Found at i:3794031 original size:11 final size:10
Alignment explanation
Indices: 3793991--3794068 Score: 51
Period size: 11 Copynumber: 7.9 Consensus size: 10
3793981 TAATTTAGAG
*
3793991 TTAAATTGATT
1 TTAAATTTA-T
3794002 TTAAATTTAT
1 TTAAATTTAT
3794012 TT-AA---AT
1 TTAAATTTAT
3794018 TTAAATTTATT
1 TTAAATTTA-T
3794029 TTAAATTTAAAT
1 TTAAATTT--AT
3794041 TT-AA-TTAT
1 TTAAATTTAT
3794049 TTAAATTTACT
1 TTAAATTTA-T
*
3794060 TTGAATTTA
1 TTAAATTTA
3794069 AATTTAAATA
Statistics
Matches: 55, Mismatches: 2, Indels: 20
0.71 0.03 0.26
Matches are distributed among these distances:
6 4 0.07
7 2 0.04
8 4 0.07
9 4 0.07
10 9 0.16
11 28 0.51
12 3 0.05
13 1 0.02
ACGTcount: A:0.40, C:0.01, G:0.03, T:0.56
Consensus pattern (10 bp):
TTAAATTTAT
Found at i:3795670 original size:30 final size:30
Alignment explanation
Indices: 3795629--3795840 Score: 282
Period size: 30 Copynumber: 7.1 Consensus size: 30
3795619 AATTGTCTAG
* *
3795629 AAATTACATTTTGACCCTAAAACTTTTACA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
* *
3795659 AAATTATATTTTAACCCCAAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
*
3795689 AAATTACATTTTGACCCCAAAACTTTACCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
* *
3795719 AAATTATATTTTGACCCCGAAACTTTAT-CA
1 AAATTACATTTTGACCCCAAAACTTT-TCCA
* *
3795749 AAATTACATTTTGACCTCGAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
* * *
3795779 AAATTACATTTTAACCCAAAAACCTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
* *
3795809 AAATTATATTTTGACCTCAAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
3795839 AA
1 AA
3795841 TTCCATTCTT
Statistics
Matches: 158, Mismatches: 22, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
29 1 0.01
30 157 0.99
ACGTcount: A:0.39, C:0.23, G:0.03, T:0.35
Consensus pattern (30 bp):
AAATTACATTTTGACCCCAAAACTTTTCCA
Found at i:3807949 original size:31 final size:31
Alignment explanation
Indices: 3807914--3808329 Score: 170
Period size: 37 Copynumber: 12.4 Consensus size: 31
3807904 TTCATCTCTA
*
3807914 AAATTGAAGTAAGAGCAATGTCATCCCCTTG
1 AAATTGAAGTAAGAGCAACGTCATCCCCTTG
* * * *
3807945 AAATTGAAGTAGAGTGGATAAC-ACGTCCCCTTG
1 AAATTGAAGTA-AG-AG-CAACGTCATCCCCTTG
** * **
3807978 AAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTG
1 AAATTGAAGTA-A---GAGCA-ACGTCATCCCCT-TG
*
3808015 AAATTGAAGTAAGAGCAACGTCATTCCCTTG
1 AAATTGAAGTAAGAGCAACGTCATCCCCTTG
** * **
3808046 AAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTG
1 AAATTGAAGTA-A---GAGCA-ACGTCATCCCCT-TG
3808083 AAATTGAAGTAAGAGCAACGTCATCCCCTTG
1 AAATTGAAGTAAGAGCAACGTCATCCCCTTG
** * **
3808114 AAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTG
1 AAATTGAAGTA-A---GAGCA-ACGTCATCCCCT-TG
*
3808151 AAATTGAAGTAAGAGCAACGTCATTCCCTTG
1 AAATTGAAGTAAGAGCAACGTCATCCCCTTG
** * **
3808182 AAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTG
1 AAATTGAAGTA-A---GAGCA-ACGTCATCCCCT-TG
* * *
3808219 AAATTGAAGTAAGAAGTAGCGTCATCCCCTCG
1 AAATTGAAGTAAG-AGCAACGTCATCCCCTTG
* * * *
3808251 AAATTGAAGTAGAGTGGATAACAT-ATCTTTACCTCTG
1 AAATTGAAGTA-AG-AG-CAACGTCATC---CCCT-TG
* * *
3808288 AAATTGAAATAAGAGCAATGTCATCCTCTTG
1 AAATTGAAGTAAGAGCAACGTCATCCCCTTG
3808319 AAATTGAAGTA
1 AAATTGAAGTA
3808330 GAGTTGGATA
Statistics
Matches: 283, Mismatches: 67, Indels: 70
0.67 0.16 0.17
Matches are distributed among these distances:
31 62 0.22
32 44 0.16
33 47 0.17
34 12 0.04
35 15 0.05
36 40 0.14
37 63 0.22
ACGTcount: A:0.35, C:0.17, G:0.20, T:0.27
Consensus pattern (31 bp):
AAATTGAAGTAAGAGCAACGTCATCCCCTTG
Found at i:3808052 original size:68 final size:68
Alignment explanation
Indices: 3807972--3808374 Score: 646
Period size: 68 Copynumber: 5.9 Consensus size: 68
3807962 ATAACACGTC
3807972 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAACGTC
1 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAACGTC
3808037 ATT
66 ATT
3808040 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAACGTC
1 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAACGTC
*
3808105 ATC
66 ATT
3808108 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAACGTC
1 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAACGTC
3808173 ATT
66 ATT
* *
3808176 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAAGTAGCGT
1 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAG-AGCAACGT
*
3808241 CATC
65 CATT
* ** * * * *
3808245 CCCTCGAAATTGAAGTAGAGTGGATAACATATCTTTACCTCTGAAATTGAAATAAGAGCAATGTC
1 CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAACGTC
3808310 A-T
66 ATT
** *
3808312 CCTCTTGAAATTGAAGTAGAGTTGGATAACACACCTTTATCTCTGAAATTGAAGTAAGAGCAA
1 CC-CTTGAAATTGAAGTAGAG-TGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAA
3808375 GATCATTTTC
Statistics
Matches: 312, Mismatches: 20, Indels: 5
0.93 0.06 0.01
Matches are distributed among these distances:
67 2 0.01
68 214 0.69
69 96 0.31
ACGTcount: A:0.35, C:0.17, G:0.20, T:0.28
Consensus pattern (68 bp):
CCCTTGAAATTGAAGTAGAGTGGATAACACGTCTTCATCTCTGAAATTGAAGTAAGAGCAACGTC
ATT
Found at i:3808739 original size:27 final size:27
Alignment explanation
Indices: 3808708--3808762 Score: 83
Period size: 27 Copynumber: 2.0 Consensus size: 27
3808698 ATTTTTTTTA
*
3808708 ATTTAGAGTTAAATTGATTTTAAATTT
1 ATTTAAAGTTAAATTGATTTTAAATTT
* *
3808735 ATTTAAATTTAAATTTATTTTAAATTT
1 ATTTAAAGTTAAATTGATTTTAAATTT
3808762 A
1 A
3808763 AATTTAATTA
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.40, C:0.00, G:0.05, T:0.55
Consensus pattern (27 bp):
ATTTAAAGTTAAATTGATTTTAAATTT
Found at i:3808744 original size:6 final size:6
Alignment explanation
Indices: 3808726--3808825 Score: 91
Period size: 6 Copynumber: 16.8 Consensus size: 6
3808716 TTAAATTGAT
*
3808726 TTTAAA TTT--A TTTAAA TTTAAA TTT-AT TTTAAA TTTAAA TTTAATTA
1 TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAA--A
* * ** *
3808773 TTTAAA TTT-AC TTTGAA TTTAAA TTTAAA TAAAAA TTAAAA TATTAAA
1 TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA T-TTAAA
3808821 TTTAA
1 TTTAA
3808826 CATTAAAAAT
Statistics
Matches: 78, Mismatches: 9, Indels: 14
0.77 0.09 0.14
Matches are distributed among these distances:
4 4 0.05
5 8 0.10
6 55 0.71
7 5 0.06
8 6 0.08
ACGTcount: A:0.47, C:0.01, G:0.01, T:0.51
Consensus pattern (6 bp):
TTTAAA
Found at i:3808744 original size:17 final size:17
Alignment explanation
Indices: 3808726--3808799 Score: 93
Period size: 17 Copynumber: 4.6 Consensus size: 17
3808716 TTAAATTGAT
3808726 TTTAAATTTA-TTTAAA
1 TTTAAATTTACTTTAAA
*
3808742 TTTAAATTTATTTTAAA
1 TTTAAATTTACTTTAAA
*
3808759 TTTAAATTTA-ATT--A
1 TTTAAATTTACTTTAAA
*
3808773 TTTAAATTTACTTTGAA
1 TTTAAATTTACTTTAAA
3808790 TTTAAATTTA
1 TTTAAATTTA
3808800 AATAAAAATT
Statistics
Matches: 52, Mismatches: 2, Indels: 7
0.85 0.03 0.11
Matches are distributed among these distances:
14 11 0.21
15 2 0.04
16 12 0.23
17 27 0.52
ACGTcount: A:0.41, C:0.01, G:0.01, T:0.57
Consensus pattern (17 bp):
TTTAAATTTACTTTAAA
Found at i:3808756 original size:11 final size:10
Alignment explanation
Indices: 3808716--3808793 Score: 51
Period size: 11 Copynumber: 7.9 Consensus size: 10
3808706 TAATTTAGAG
*
3808716 TTAAATTGATT
1 TTAAATTTA-T
3808727 TTAAATTTAT
1 TTAAATTTAT
3808737 TT-AA---AT
1 TTAAATTTAT
3808743 TTAAATTTATT
1 TTAAATTTA-T
3808754 TTAAATTTAAAT
1 TTAAATTT--AT
3808766 TT-AA-TTAT
1 TTAAATTTAT
3808774 TTAAATTTACT
1 TTAAATTTA-T
*
3808785 TTGAATTTA
1 TTAAATTTA
3808794 AATTTAAATA
Statistics
Matches: 55, Mismatches: 2, Indels: 20
0.71 0.03 0.26
Matches are distributed among these distances:
6 4 0.07
7 2 0.04
8 4 0.07
9 4 0.07
10 9 0.16
11 28 0.51
12 3 0.05
13 1 0.02
ACGTcount: A:0.40, C:0.01, G:0.03, T:0.56
Consensus pattern (10 bp):
TTAAATTTAT
Found at i:3810392 original size:30 final size:30
Alignment explanation
Indices: 3810356--3810658 Score: 446
Period size: 30 Copynumber: 10.1 Consensus size: 30
3810346 AATTGTCTAG
*
3810356 AAATTACATTTTGACCCTAAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
*
3810386 AAATTACATTTTGACCCCAAAACTTTACCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
* * *
3810416 AAATTATATTTTAACCCCGAAACTTTAT-CA
1 AAATTACATTTTGACCCCAAAACTTT-TCCA
* *
3810446 AAATTACATTTTAACCCCGAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
*
3810476 AAATTACATTTTGACCCTAAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
* *
3810506 AAATTACATTTTAACCCTAAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
*
3810536 AAATTACATTTTGACCCCGAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
3810566 AAATTACATTTTGACCCCAAAACTTTTCCCA
1 AAATTACATTTTGACCCCAAAACTTTT-CCA
* *
3810597 AAATTACATTTTGACCCAAAAACCTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
* *
3810627 AAATTACATTTTAACCTCAAAACTTTTCCA
1 AAATTACATTTTGACCCCAAAACTTTTCCA
3810657 AA
1 AA
3810659 TTCCATTCTT
Statistics
Matches: 249, Mismatches: 21, Indels: 6
0.90 0.08 0.02
Matches are distributed among these distances:
29 1 0.00
30 220 0.88
31 28 0.11
ACGTcount: A:0.38, C:0.25, G:0.03, T:0.34
Consensus pattern (30 bp):
AAATTACATTTTGACCCCAAAACTTTTCCA
Found at i:3812718 original size:15 final size:15
Alignment explanation
Indices: 3812700--3812734 Score: 52
Period size: 15 Copynumber: 2.3 Consensus size: 15
3812690 CAAAAATAAA
3812700 TAAATAAATTTAATT
1 TAAATAAATTTAATT
**
3812715 TAAATTTATTTAATT
1 TAAATAAATTTAATT
3812730 TAAAT
1 TAAAT
3812735 GTCTATTTTA
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
15 18 1.00
ACGTcount: A:0.49, C:0.00, G:0.00, T:0.51
Consensus pattern (15 bp):
TAAATAAATTTAATT
Found at i:3814603 original size:90 final size:90
Alignment explanation
Indices: 3814509--3814753 Score: 310
Period size: 90 Copynumber: 2.7 Consensus size: 90
3814499 AACTAGTGGT
* * * *
3814509 TTAGGATCAGGTTTCTCCTTCTTTGATGGTTCATATAAAGGTGGCATGGGTTCAGGCTTTTCTTT
1 TTAGGATCAGGTTTCTCCTTCTTTGGTGGTTCATACACAGGTGGCTTGGGTTCAGGCTTTTCTTT
*
3814574 TTTTGGTGGTGCAAAAACCGGTGAC
66 TTTTGGTGGTGCAAAAACCGATGAC
* * * * *
3814599 TTAGGCTCAGGCTTCTCCTTCTTTGGTGTTTCATACACAGGTGGCTTGGGTTCAAGCTTCTCTTT
1 TTAGGATCAGGTTTCTCCTTCTTTGGTGGTTCATACACAGGTGGCTTGGGTTCAGGCTTTTCTTT
* * * **
3814664 TTTTGGTGGTGTATAAACTGATGGT
66 TTTTGGTGGTGCAAAAACCGATGAC
* * ** *
3814689 TTAGGTTCAGGTTTCTCTTTCTTTGGTGGTTCATACACTTGTGGCTTGGGTTTAGGCTTTTCTTT
1 TTAGGATCAGGTTTCTCCTTCTTTGGTGGTTCATACACAGGTGGCTTGGGTTCAGGCTTTTCTTT
3814754 CTAATTAGAG
Statistics
Matches: 131, Mismatches: 24, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
90 131 1.00
ACGTcount: A:0.15, C:0.16, G:0.26, T:0.43
Consensus pattern (90 bp):
TTAGGATCAGGTTTCTCCTTCTTTGGTGGTTCATACACAGGTGGCTTGGGTTCAGGCTTTTCTTT
TTTTGGTGGTGCAAAAACCGATGAC
Found at i:3814753 original size:45 final size:44
Alignment explanation
Indices: 3814437--3814755 Score: 189
Period size: 45 Copynumber: 7.1 Consensus size: 44
3814427 CACGCGTGGC
* * * * * *
3814437 TTCTTTGGAGGCTCATAAGCTGGAGGTTTGGGTTCTGG-TTGTTCT
1 TTCTTTGGTGGTTCATAAAC-GGTGGCTTGGGTTCAGGCTT-TTCT
* * * * * *
3814482 TTCTTTGGAGGTGT-ATAAACTAGTGGTTTAGGATCAGG-TTTCTCC
1 TTCTTTGGTGGT-TCATAAAC-GGTGGCTTGGGTTCAGGCTTT-TCT
* * *
3814527 TTCTTTGATGGTTCATATAAAGGTGGCATGGGTTCAGGCTTTTCT
1 TTCTTTGGTGGTTCATA-AACGGTGGCTTGGGTTCAGGCTTTTCT
* * * * * * * *
3814572 TTTTTTGGTGGTGCAAAAACCGGTGACTTAGGCTCAGGCTTCTCC
1 TTCTTTGGTGGTTCATAAA-CGGTGGCTTGGGTTCAGGCTTTTCT
* * * *
3814617 TTCTTTGGTGTTTCATACACAGGTGGCTTGGGTTCAAGCTTCTCT
1 TTCTTTGGTGGTTCATAAAC-GGTGGCTTGGGTTCAGGCTTTTCT
* * * *
3814662 TTTTTTGGTGGTGT-ATAAACTGATGGTTTAGGTTCAGG-TTTCTCT
1 TTCTTTGGTGGT-TCATAAAC-GGTGGCTTGGGTTCAGGCTTT-TCT
* * *
3814707 TTCTTTGGTGGTTCATACACTTGTGGCTTGGGTTTAGGCTTTTCT
1 TTCTTTGGTGGTTCATAAAC-GGTGGCTTGGGTTCAGGCTTTTCT
3814752 TTCT
1 TTCT
3814756 AATTAGAGGT
Statistics
Matches: 209, Mismatches: 54, Indels: 22
0.73 0.19 0.08
Matches are distributed among these distances:
44 8 0.04
45 191 0.91
46 10 0.05
ACGTcount: A:0.15, C:0.15, G:0.27, T:0.43
Consensus pattern (44 bp):
TTCTTTGGTGGTTCATAAACGGTGGCTTGGGTTCAGGCTTTTCT
Found at i:3814768 original size:90 final size:88
Alignment explanation
Indices: 3814464--3814753 Score: 287
Period size: 90 Copynumber: 3.2 Consensus size: 88
3814454 AGCTGGAGGT
* *
3814464 TTGGGTTCTGG-TTGTTCTTTCTTTGGAGGTGTATAAACT-AGTGGTTTAGGATCAGGTTTCTCC
1 TTGGGTTCAGGCTT-TTCTTTTTTTGGA-G-GTATAAACTGA-TGGTTTAGGATCAGGTTTCTCC
* * *
3814527 TTCTTTGATGGTTCATATAAAGGTGGC
62 TTCTTTGGTGGTTCATACACAGGTGGC
* * * * * ** * *
3814554 ATGGGTTCAGGCTTTTCTTTTTTTGGTGGTGCAAAAACCGGTGACTTAGGCTCAGGCTTCTCCTT
1 TTGGGTTCAGGCTTTTCTTTTTTTGGAGGT--ATAAACTGATGGTTTAGGATCAGGTTTCTCCTT
*
3814619 CTTTGGTGTTTCATACACAGGTGGC
64 CTTTGGTGGTTCATACACAGGTGGC
* * * * *
3814644 TTGGGTTCAAGCTTCTCTTTTTTTGGTGGTGTATAAACTGATGGTTTAGGTTCAGGTTTCTCTTT
1 TTGGGTTCAGGCTTTTCTTTTTTTGG-AG-GTATAAACTGATGGTTTAGGATCAGGTTTCTCCTT
**
3814709 CTTTGGTGGTTCATACACTTGTGGC
64 CTTTGGTGGTTCATACACAGGTGGC
*
3814734 TTGGGTTTAGGCTTTTCTTT
1 TTGGGTTCAGGCTTTTCTTT
3814754 CTAATTAGAG
Statistics
Matches: 161, Mismatches: 33, Indels: 12
0.78 0.16 0.06
Matches are distributed among these distances:
88 2 0.01
89 1 0.01
90 153 0.95
91 3 0.02
92 2 0.01
ACGTcount: A:0.14, C:0.15, G:0.27, T:0.44
Consensus pattern (88 bp):
TTGGGTTCAGGCTTTTCTTTTTTTGGAGGTATAAACTGATGGTTTAGGATCAGGTTTCTCCTTCT
TTGGTGGTTCATACACAGGTGGC
Found at i:3818656 original size:90 final size:90
Alignment explanation
Indices: 3818524--3818811 Score: 375
Period size: 90 Copynumber: 3.2 Consensus size: 90
3818514 ACACTGGTGG
* * ** *
3818524 CTTCTTTGGAGGCTT-ATAAACTGGTGG-TTCTGGTTCTGGTTTTTCTTTCTTTGGAGGTGCATA
1 CTTCTTTGGTGG-TTCATACACTGGTGGCTTC-GGTTCAAGTTTTTCTTTCTTTGGAGGTGTATA
3818587 AACTGGTGGTTTAGGCTCAGGCTTTTC
64 AACTGGTGGTTTAGGCTCAGGCTTTTC
* *
3818614 CTTCTTTGGTGGTTCATACGCTGGTGGCTT-GGATTCAAGTTTTTCTTTCTTTGGTGGTGTATAA
1 CTTCTTTGGTGGTTCATACACTGGTGGCTTCGG-TTCAAGTTTTTCTTTCTTTGGAGGTGTATAA
* *
3818678 ATTGGTGGTTTAGGCTCAGGTTTTTC
65 ACTGGTGGTTTAGGCTCAGGCTTTTC
* * * ** * *
3818704 CTTCTTTGGAGGTTCATATACTGGTGGTTTCGGTTCGGGCTTCTCTTTCTTTGGAGGTGTATAAA
1 CTTCTTTGGTGGTTCATACACTGGTGGCTTCGGTTCAAGTTTTTCTTTCTTTGGAGGTGTATAAA
*
3818769 CTGGTGGTTTAGGCTCAGGCTTCTC
66 CTGGTGGTTTAGGCTCAGGCTTTTC
3818794 CTTCTTTGGTGGTTCATA
1 CTTCTTTGGTGGTTCATA
3818812 GACCGGAGGT
Statistics
Matches: 172, Mismatches: 22, Indels: 8
0.85 0.11 0.04
Matches are distributed among these distances:
89 4 0.02
90 164 0.95
91 4 0.02
ACGTcount: A:0.12, C:0.16, G:0.28, T:0.44
Consensus pattern (90 bp):
CTTCTTTGGTGGTTCATACACTGGTGGCTTCGGTTCAAGTTTTTCTTTCTTTGGAGGTGTATAAA
CTGGTGGTTTAGGCTCAGGCTTTTC
Found at i:3818773 original size:135 final size:135
Alignment explanation
Indices: 3818525--3818775 Score: 319
Period size: 135 Copynumber: 1.9 Consensus size: 135
3818515 CACTGGTGGC
* * *
3818525 TTCTTTGGAGGCTTATAAACTGGTGGTTCTGGTTCTGGTTTTTCTTTCTTTGGAGGTGCATAAAC
1 TTCTTTGGAGGCTTATAAACTGGTGGTTCTGGCTCAGGTTTTTCCTTCTTTGGAGGTGCATAAAC
* * **
3818590 TGGTGGTTTAGGCTCAGGCTTTTCCTTCTTTGGTGGTTCATACGCTGGTGGCTTGGATTCAAGTT
66 TGGTGGTTTAGGCTCAGGCTTCTCCTTCTTTGGAGGTTCATAAACTGGTGGCTTGGATTCAAGTT
3818655 TTTCT
131 TTTCT
* * * *
3818660 TTCTTTGGTGG-TGTATAAATTGGTGGTT-TAGGCTCAGGTTTTTCCTTCTTTGGAGGTTCATAT
1 TTCTTTGGAGGCT-TATAAACTGGTGGTTCT-GGCTCAGGTTTTTCCTTCTTTGGAGGTGCATAA
* * * *
3818723 ACTGGTGGTTTCGGTTCGGGCTTCTCTTTCTTTGGAGGTGT-ATAAACTGGTGG
64 ACTGGTGGTTTAGGCTCAGGCTTCTCCTTCTTTGGAGGT-TCATAAACTGGTGG
3818776 TTTAGGCTCA
Statistics
Matches: 98, Mismatches: 15, Indels: 6
0.82 0.13 0.05
Matches are distributed among these distances:
134 2 0.02
135 95 0.97
136 1 0.01
ACGTcount: A:0.13, C:0.14, G:0.29, T:0.44
Consensus pattern (135 bp):
TTCTTTGGAGGCTTATAAACTGGTGGTTCTGGCTCAGGTTTTTCCTTCTTTGGAGGTGCATAAAC
TGGTGGTTTAGGCTCAGGCTTCTCCTTCTTTGGAGGTTCATAAACTGGTGGCTTGGATTCAAGTT
TTTCT
Found at i:3818799 original size:135 final size:134
Alignment explanation
Indices: 3818524--3818807 Score: 313
Period size: 135 Copynumber: 2.1 Consensus size: 134
3818514 ACACTGGTGG
* * * *
3818524 CTTCTTTGGAGGCTTATAAACTGGTGGTTCTGGTTCTGGTTTTTCTTTCTTTGGAGGTGCATAAA
1 CTTCTTTGGTGG-TTATAAACTGGTGGTTCTGGCTCAGGTTTTTCCTTCTTTGGAGGTGCATAAA
* * ** * *
3818589 CTGGTGGTTTAGGCTCAGGCTTTTCCTTCTTTGGTGGTTCATACGCTGGTGGCTTGGATTCAAGT
65 CTGGTGGTTTAGGCTCAGGCTTCTCCTTCTTTGGAGGTTCATAAACTGGTGGCTTGGACTCAAGC
*
3818654 TTTTC
130 TTCTC
* * * *
3818659 TTTCTTTGGTGGTGTATAAATTGGTGGTT-TAGGCTCAGGTTTTTCCTTCTTTGGAGGTTCATAT
1 CTTCTTTGGTGGT-TATAAACTGGTGGTTCT-GGCTCAGGTTTTTCCTTCTTTGGAGGTGCATAA
* * * * *
3818723 ACTGGTGGTTTCGGTTCGGGCTTCTCTTTCTTTGGAGGTGT-ATAAACTGGTGGTTTAGG-CTCA
64 ACTGGTGGTTTAGGCTCAGGCTTCTCCTTCTTTGGAGGT-TCATAAACTGGTGGCTT-GGACTCA
*
3818786 GGCTTCTC
127 AGCTTCTC
3818794 CTTCTTTGGTGGTT
1 CTTCTTTGGTGGTT
3818808 CATAGACCGG
Statistics
Matches: 123, Mismatches: 22, Indels: 9
0.80 0.14 0.06
Matches are distributed among these distances:
134 3 0.02
135 117 0.95
136 3 0.02
ACGTcount: A:0.12, C:0.15, G:0.28, T:0.44
Consensus pattern (134 bp):
CTTCTTTGGTGGTTATAAACTGGTGGTTCTGGCTCAGGTTTTTCCTTCTTTGGAGGTGCATAAAC
TGGTGGTTTAGGCTCAGGCTTCTCCTTCTTTGGAGGTTCATAAACTGGTGGCTTGGACTCAAGCT
TCTC
Found at i:3818824 original size:45 final size:45
Alignment explanation
Indices: 3818524--3818811 Score: 280
Period size: 45 Copynumber: 6.4 Consensus size: 45
3818514 ACACTGGTGG
* * *
3818524 CTTCTTTGGAGGCTT-ATAAACTGGTGGTTCT-GGTTCTGGTTTTTC
1 CTTCTTTGGAGG-TTCATAAACTGGTGGTT-TAGGCTCAGGCTTTTC
* *
3818569 TTTCTTTGGAGGTGCATAAACTGGTGGTTTAGGCTCAGGCTTTTC
1 CTTCTTTGGAGGTTCATAAACTGGTGGTTTAGGCTCAGGCTTTTC
* ** * * * *
3818614 CTTCTTTGGTGGTTCATACGCTGGTGGCTT-GGATTCAAGTTTTTC
1 CTTCTTTGGAGGTTCATAAACTGGTGGTTTAGG-CTCAGGCTTTTC
* * * *
3818659 TTTCTTTGGTGGTGT-ATAAATTGGTGGTTTAGGCTCAGGTTTTTC
1 CTTCTTTGGAGGT-TCATAAACTGGTGGTTTAGGCTCAGGCTTTTC
* * * * *
3818704 CTTCTTTGGAGGTTCATATACTGGTGGTTTCGGTTCGGGCTTCTC
1 CTTCTTTGGAGGTTCATAAACTGGTGGTTTAGGCTCAGGCTTTTC
* *
3818749 TTTCTTTGGAGGTGT-ATAAACTGGTGGTTTAGGCTCAGGCTTCTC
1 CTTCTTTGGAGGT-TCATAAACTGGTGGTTTAGGCTCAGGCTTTTC
*
3818794 CTTCTTTGGTGGTTCATA
1 CTTCTTTGGAGGTTCATA
3818812 GACCGGAGGT
Statistics
Matches: 198, Mismatches: 37, Indels: 16
0.79 0.15 0.06
Matches are distributed among these distances:
44 6 0.03
45 188 0.95
46 4 0.02
ACGTcount: A:0.12, C:0.16, G:0.28, T:0.44
Consensus pattern (45 bp):
CTTCTTTGGAGGTTCATAAACTGGTGGTTTAGGCTCAGGCTTTTC
Found at i:3821066 original size:9 final size:9
Alignment explanation
Indices: 3821052--3821076 Score: 50
Period size: 9 Copynumber: 2.8 Consensus size: 9
3821042 AAATTCAAAG
3821052 AAAATATAA
1 AAAATATAA
3821061 AAAATATAA
1 AAAATATAA
3821070 AAAATAT
1 AAAATAT
3821077 TTTTTAATAT
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 16 1.00
ACGTcount: A:0.76, C:0.00, G:0.00, T:0.24
Consensus pattern (9 bp):
AAAATATAA
Found at i:3821850 original size:16 final size:15
Alignment explanation
Indices: 3821801--3821850 Score: 55
Period size: 16 Copynumber: 3.2 Consensus size: 15
3821791 AGTAATTTAG
*
3821801 ATTTGATATTAAAATT
1 ATTTGA-ATTTAAATT
*
3821817 ATTTGAATTTAAAAT
1 ATTTGAATTTAAATT
*
3821832 ATTTCGAATTTAACTT
1 ATTT-GAATTTAAATT
3821848 ATT
1 ATT
3821851 ATTATTAAAT
Statistics
Matches: 29, Mismatches: 4, Indels: 2
0.83 0.11 0.06
Matches are distributed among these distances:
15 11 0.38
16 18 0.62
ACGTcount: A:0.40, C:0.04, G:0.06, T:0.50
Consensus pattern (15 bp):
ATTTGAATTTAAATT
Found at i:3823787 original size:16 final size:15
Alignment explanation
Indices: 3823761--3823803 Score: 52
Period size: 15 Copynumber: 2.9 Consensus size: 15
3823751 ACCAGTTGAA
*
3823761 TTTAT-TATTTTTCT
1 TTTATATATTTTTAT
3823775 TTTAATATATTTTTAT
1 TTT-ATATATTTTTAT
*
3823791 TTTTTATATTTTT
1 TTTATATATTTTT
3823804 TAATAATTTA
Statistics
Matches: 25, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
14 3 0.12
15 11 0.44
16 11 0.44
ACGTcount: A:0.21, C:0.02, G:0.00, T:0.77
Consensus pattern (15 bp):
TTTATATATTTTTAT
Found at i:3823798 original size:15 final size:15
Alignment explanation
Indices: 3823761--3823803 Score: 50
Period size: 16 Copynumber: 2.7 Consensus size: 15
3823751 ACCAGTTGAA
*
3823761 TTTATTATTTTTCTTT
1 TTTA-TATTTTTATTT
*
3823777 TAATATATTTTTATTT
1 T-TTATATTTTTATTT
3823793 TTTATATTTTT
1 TTTATATTTTT
3823804 TAATAATTTA
Statistics
Matches: 23, Mismatches: 3, Indels: 3
0.79 0.10 0.10
Matches are distributed among these distances:
15 9 0.39
16 12 0.52
17 2 0.09
ACGTcount: A:0.21, C:0.02, G:0.00, T:0.77
Consensus pattern (15 bp):
TTTATATTTTTATTT
Found at i:3832731 original size:29 final size:28
Alignment explanation
Indices: 3832692--3832860 Score: 109
Period size: 29 Copynumber: 5.8 Consensus size: 28
3832682 TTCGATGAAA
3832692 TCGGGGTTAAAAATGGAATTTTGGAAAGTT
1 TCGGGGTT-AAAATGGAATTTTGGAAAG-T
* *
3832722 TTGGGG-TAAAATGTTAATTTTTGGTGAAA-T
1 TCGGGGTTAAAATG-GAA-TTTT-G-GAAAGT
3832752 T-GGGGTTAAAAATGGAATTTTGGAAAGTT
1 TCGGGGTT-AAAATGGAATTTTGGAAAG-T
* *
3832781 TAGGGG-TAAAATGGTAGTTTTTGGTGAAA--
1 TCGGGGTTAAAATGG-A-ATTTT-G-GAAAGT
*
3832810 TCGGGGCTAAAAATGGAATTTTGGAAAGT
1 TCGGGG-TTAAAATGGAATTTTGGAAAGT
3832839 TCGAGGG-TAAAATGGTAATTTT
1 TCG-GGGTTAAAATGG-AATTTT
3832861 TGGTGAAATC
Statistics
Matches: 112, Mismatches: 8, Indels: 39
0.70 0.05 0.25
Matches are distributed among these distances:
27 8 0.07
28 22 0.20
29 33 0.29
30 26 0.23
31 15 0.13
32 8 0.07
ACGTcount: A:0.33, C:0.02, G:0.30, T:0.35
Consensus pattern (28 bp):
TCGGGGTTAAAATGGAATTTTGGAAAGT
Found at i:3832750 original size:59 final size:59
Alignment explanation
Indices: 3832665--3832890 Score: 337
Period size: 59 Copynumber: 3.8 Consensus size: 59
3832655 TTGGACTCTC
* * * *
3832665 GGGGTAAAATGGTAAATTTCGATGAAATCGGGGTTAAAAATGGAATTTTGGAAAGTTTT
1 GGGGTAAAATGGTAATTTTTGGTGAAATCGGGGTTAAAAATGGAATTTTGGAAAGTTTA
* *
3832724 GGGGTAAAATGTTAATTTTTGGTGAAATTGGGGTTAAAAATGGAATTTTGGAAAGTTTA
1 GGGGTAAAATGGTAATTTTTGGTGAAATCGGGGTTAAAAATGGAATTTTGGAAAGTTTA
* * *
3832783 GGGGTAAAATGGTAGTTTTTGGTGAAATCGGGGCTAAAAATGGAATTTTGGAAAG-TTC
1 GGGGTAAAATGGTAATTTTTGGTGAAATCGGGGTTAAAAATGGAATTTTGGAAAGTTTA
* *
3832841 GAGGGTAAAATGGTAATTTTTGGTGAAATCGAGGTTAAAAATGCAATTTT
1 G-GGGTAAAATGGTAATTTTTGGTGAAATCGGGGTTAAAAATGGAATTTT
3832891 TGGACTGTTT
Statistics
Matches: 151, Mismatches: 15, Indels: 2
0.90 0.09 0.01
Matches are distributed among these distances:
58 3 0.02
59 148 0.98
ACGTcount: A:0.34, C:0.03, G:0.29, T:0.34
Consensus pattern (59 bp):
GGGGTAAAATGGTAATTTTTGGTGAAATCGGGGTTAAAAATGGAATTTTGGAAAGTTTA
Found at i:3832873 original size:30 final size:31
Alignment explanation
Indices: 3832725--3832893 Score: 123
Period size: 30 Copynumber: 5.7 Consensus size: 31
3832715 GAAAGTTTTG
* *
3832725 GGGT-AAAATGTTAATTTTTGGTGAAATTG-
1 GGGTAAAAATGGTAATTTTTGGTGAAATCGA
**
3832754 GGGTTAAAAATGG-AA-TTTT-G-GAAAGTTTA
1 GGG-TAAAAATGGTAATTTTTGGTGAAA-TCGA
*
3832783 GGGGT-AAAATGGTAGTTTTTGGTGAAATCG-
1 -GGGTAAAAATGGTAATTTTTGGTGAAATCGA
3832813 GGGCTAAAAATGG-AA-TTTT-G-GAAAGTTCGA
1 GGG-TAAAAATGGTAATTTTTGGTGAAA--TCGA
3832843 GGGT-AAAATGGTAATTTTTGGTGAAATCGA
1 GGGTAAAAATGGTAATTTTTGGTGAAATCGA
* *
3832873 GGTTAAAAAT-GCAATTTTTGG
1 GGGTAAAAATGGTAATTTTTGG
3832894 ACTGTTTGGG
Statistics
Matches: 113, Mismatches: 8, Indels: 37
0.72 0.05 0.23
Matches are distributed among these distances:
27 8 0.07
28 18 0.16
29 22 0.19
30 36 0.32
31 21 0.19
32 8 0.07
ACGTcount: A:0.33, C:0.03, G:0.30, T:0.34
Consensus pattern (31 bp):
GGGTAAAAATGGTAATTTTTGGTGAAATCGA
Found at i:3834100 original size:21 final size:21
Alignment explanation
Indices: 3834053--3834102 Score: 68
Period size: 21 Copynumber: 2.4 Consensus size: 21
3834043 TTAATGCTTT
3834053 TATTT-AAAATTAATTAATAC
1 TATTTAAAAATTAATTAATAC
*
3834073 TATTTAAAACATTAATTAATGC
1 TATTTAAAA-ATTAATTAATAC
3834095 -ATTTAAAA
1 TATTTAAAA
3834103 TATTCAATGA
Statistics
Matches: 27, Mismatches: 1, Indels: 3
0.87 0.03 0.10
Matches are distributed among these distances:
20 5 0.19
21 11 0.41
22 11 0.41
ACGTcount: A:0.50, C:0.06, G:0.02, T:0.42
Consensus pattern (21 bp):
TATTTAAAAATTAATTAATAC
Found at i:3837280 original size:6 final size:6
Alignment explanation
Indices: 3837269--3837293 Score: 50
Period size: 6 Copynumber: 4.2 Consensus size: 6
3837259 CAAATGTGCG
3837269 TATACA TATACA TATACA TATACA T
1 TATACA TATACA TATACA TATACA T
3837294 GATGTTTGGT
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 19 1.00
ACGTcount: A:0.48, C:0.16, G:0.00, T:0.36
Consensus pattern (6 bp):
TATACA
Found at i:3848389 original size:63 final size:60
Alignment explanation
Indices: 3848288--3848438 Score: 195
Period size: 63 Copynumber: 2.5 Consensus size: 60
3848278 TTTTGGTTTG
* *
3848288 TTATTTATTTATTTATTT-AT--AATAATAAATAAATAATAAAACAAAATTAATATTATT
1 TTATTTATTTATTTATTTCATAAAATAATAAATAAACAATAAAACAAAATCAATATTATT
*
3848345 TTACGTTTATTTATTTATATTCATAAAATAATAAATAAACAATAAAATAAAATCAATATTATT
1 TTA--TTTATTTATTTAT-TTCATAAAATAATAAATAAACAATAAAACAAAATCAATATTATT
3848408 TTA--TATTTATTTATTTTCATAAAAATAATAA
1 TTATTTATTTATTTA-TTTCAT-AAAATAATAA
3848439 TAATAAATAA
Statistics
Matches: 83, Mismatches: 3, Indels: 13
0.84 0.03 0.13
Matches are distributed among these distances:
57 3 0.04
59 28 0.34
60 13 0.16
61 2 0.02
63 37 0.45
ACGTcount: A:0.50, C:0.04, G:0.01, T:0.46
Consensus pattern (60 bp):
TTATTTATTTATTTATTTCATAAAATAATAAATAAACAATAAAACAAAATCAATATTATT
Found at i:3848439 original size:63 final size:64
Alignment explanation
Indices: 3848288--3848458 Score: 192
Period size: 63 Copynumber: 2.7 Consensus size: 64
3848278 TTTTGGTTTG
*** * * *
3848288 TTATTTATTTAT-TTATTTATAATAATAAATAAATAATAAAACAAAATTAATATTATTTTACGT
1 TTATTTATTTATATTAAAAATAATAATAAATAAATAATAAAATAAAATCAATATTATTTTACAT
* * * *
3848351 TTATTTATTTATATTCATAA-AATAATAAATAAACAATAAAATAAAATCAATATTATTTTATAT
1 TTATTTATTTATATTAAAAATAATAATAAATAAATAATAAAATAAAATCAATATTATTTTACAT
3848414 TTATTTATTT-TCA-TAAAAATAATAAT-AATAAATAA-ATAAATAAAA
1 TTATTTATTTAT-ATTAAAAATAATAATAAATAAATAATA-AAATAAAA
3848459 ATAATAAGAA
Statistics
Matches: 93, Mismatches: 11, Indels: 9
0.82 0.10 0.08
Matches are distributed among these distances:
61 1 0.01
62 21 0.23
63 67 0.72
64 4 0.04
ACGTcount: A:0.53, C:0.04, G:0.01, T:0.43
Consensus pattern (64 bp):
TTATTTATTTATATTAAAAATAATAATAAATAAATAATAAAATAAAATCAATATTATTTTACAT
Found at i:3849054 original size:40 final size:40
Alignment explanation
Indices: 3848992--3864552 Score: 4852
Period size: 39 Copynumber: 386.8 Consensus size: 40
3848982 TAACTTTAGG
*
3848992 GGTAAAAGAT-TAGATTGT-TTCAA-CTTGCCCCATGGTCGA
1 GGTAAAAGATCT-GATGGTCTTCAATC-TGCCCCATGGTCGA
* ** *
3849031 GGTAAGAGATCTGATGGTCTTCAATCTGCCCTTTGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3849070 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3849110 GGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3849150 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3849190 GGTAGAAGAT-TGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCT-GATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3849230 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCAAGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3849270 GGTAAAAGATC-GAATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3849309 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3849349 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3849390 GGTAAAAGAT-TGGAT-TTCTTCAATTTGCCCCACGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3849429 GGTAGAAGATCGGATGGTCTTCAACCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3849468 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3849508 GGTGAAAGATCGGATGGTCTTCAATCTTACCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3849548 GGGTAAAAGAT-TGGAT-TTTTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3849588 GGTAAAAGATC-GAATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3849628 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGTCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3849668 GGTAAAAGATCAGATGGTCTTCAATTTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAA-TCTGCCC-CATGGTCGA
* * *
3849708 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3849748 GGTAAAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3849787 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGTCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* **
3849827 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* ** * * * *
3849875 GATTGAAGATCGGATGGTCTTCAATCTTGCCTTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCC-CCATGGTCGA
* * * *
3849915 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3849955 GGTAAAAAATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3849994 GGGTAAAAAAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * * *
3850034 GGTAGAAGATCGGATGGTCTTCAATCTTCCCCTCTAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCCC-ATGGTCGA
* * * * *
3850074 GGGTAAAAGAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3850114 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * * *
3850153 GGGTAAAAGAT-TGGAT-TTTTTCAATCTGTCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* **
3850193 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* ** * * *
3850241 GATTGAAGATCGGATGGTCTTCAATCTTGCCTTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCC-CCATGGTCGA
* * * *
3850281 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * ** * *
3850321 GGTAAAAAATCGGATGGTCTTCAATCTTTCCCTTTGAT-AA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * *
3850361 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3850401 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3850441 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * **
3850481 GGTAAAAGATCGGATCGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3850522 GGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCG-
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3850560 GAGTAAAAGATCGGATGGTCTTCAATATTGCCCTCTAAT--TTG-
1 G-GTAAAAGATCTGATGGTCTTCAAT-CTGCCC-C--ATGGTCGA
* * *
3850602 GGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3850641 GGTAAAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3850680 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3850720 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3850760 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCACTC-TGGT-TA
1 -GGT-----A--AAAGATCTGATGGTCTTCAATC-TGC-CCCATGGTCGA
* ** *
3850808 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATAATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3850848 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3850888 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
** * * *
3850928 GGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* ** *
3850968 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATAATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3851008 GGTAAAAGTTCGGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3851048 GGGTAAAAGAT-TGAAT-TTTTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3851088 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3851128 GGGTAAAAG-TTTAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3851168 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3851208 GGGTAAAAGAT-TGGCT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3851248 GGTAAAAGATATGAGGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3851288 TGGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 --GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* ** * *
3851329 GGTAAAAGATCGGATCATCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3851369 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3851409 GGAAAAAGATC-GAATGGTATTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3851449 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGTCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3851489 GGTAAAAGATCGGATGGTCTTCAATTTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAA-TCTGCCC-CATGGTCGA
* * *
3851529 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3851569 GGTAAAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3851608 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* **
3851648 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3851689 GGTAAAAGAT-TAGAT-TTCTTTAATCTGCCTCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3851728 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3851768 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3851808 GGTAAAAGATC-GAATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3851848 GGGTAAAAGAT-TGGCT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3851888 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * * *
3851928 GGGTAAATGAT-TGGAT-TTTTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3851968 GGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3852007 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCG-
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3852046 GGTAGAAGATCGGATGGTCTTCAAACTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * * * *
3852085 GGGTAAAACAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3852125 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3852164 GGGTAAAAGA-CTAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3852204 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* * * * * *
3852252 GATTAAAGATCGGATGTTCTTTAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3852292 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3852332 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3852372 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATTGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3852412 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3852452 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3852492 GGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3852533 GGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3852572 GGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-TAGTTTG-
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CAT-GGTCGA
* * * *
3852613 GGTAAAAGAT-TGGAT-TTCTTCAATCTGTCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3852652 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3852692 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3852732 GGTAAACGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3852772 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3852812 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3852853 GGTAAAAGAT-TAGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3852892 GGTAAAAGAT-TAGATGGTCTTCAATATTGCCCTC-TAGTTTG-
1 GGTAAAAGATCT-GATGGTCTTCAAT-CTGCCC-CAT-GGTCGA
* * * * *
3852933 GGTAAGAGAT-TGGAT-TTTTTCAATCTGCCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3852972 GGTAAAAGATCGGATGGTCTTCAATCCTGTCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTG-CCCCATGGTCGA
* * *
3853012 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3853052 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3853092 GGGTAAATGAT-TGGAT-TTCTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3853132 GGTAAAAGATCGGATGGCCTTCAATCTTTCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * * * *
3853171 GGGAAAAGAT-TGGAT-TTCTTCCATCTGCCCTATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * * * *
3853210 GGTAGAAGATCGGATCGTCTACAATCTTCCCCTTTGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCCC-ATGGTCGA
* * * * * *
3853250 TGGTAAAAAAT-TAGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * **
3853290 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3853330 GGTAAAAGAT-TAGAT-TTCTTCAATCTTCCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3853369 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* * * * * *
3853417 GATTAAAGATC-GAATGTTCTTTAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3853457 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCTG-
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTC-GA
* * *
3853497 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3853537 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* * * * **
3853577 GGTAAAAGATCGGATGGTCCTCAATCTTCCCCTCTGGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCCC-ATGGTCGA
* * * * * * *
3853618 GGTAAAAGAT-TGGAT-TTCTTTAATTTACCTCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3853657 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3853696 GGGTAAGAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3853736 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* * * * * *
3853784 GATTAAAGATCGGATGTTCTTCAATCTTGCGCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGC-CCCATGGTCGA
* * * *
3853824 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3853864 GGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3853904 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3853944 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3853984 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3854024 GGTAAACGATCGGATGGTCTTCAATCTTGCCCTC-TAGTTG-
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3854064 GGTAAAAGAT-TAGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3854103 GGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-TAGTTTG-
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CAT-GGTCGA
* ** *
3854144 GGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATAATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3854183 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* *
3854223 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGA
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3854263 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
** * * *
3854303 GGGTAAAAGATAAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTGATGGTCTTCAATCTGCCCCATGGTCGA
* * * * * *
3854343 GGTAAAAGATCGGATGGTATTCAATCTTCACTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGC-CCCATGGTCGA
* * *
3854382 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3854422 GGTAAAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * * *
3854461 GGGTAAAAGAT-TGGAT-TTCTTTAATATGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3854501 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3854540 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3854580 GGTAAAAGATCGGATCGTCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* ** * * *
3854628 GATTGAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3854668 CGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3854708 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3854749 GGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3854788 GGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-TAGTTTG-
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CAT-GGTCGA
* *
3854829 GGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATC-A
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3854867 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 -GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3854908 GGATAAAAGAT-TGAAT-TTCTTCAATCGGCCCCATGATCGG
1 GG-TAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3854948 GGTAAAAGATCGGATGGTCTTTAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3854988 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3855028 GGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGG
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * * *
3855068 GGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3855108 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3855148 GGTAAAAGATCGGATGGTCTTCAATTTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3855187 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGT
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3855227 GGTAGAAGATCGGATGGTCTCCAATCTTCTCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGC-CC-CATGGTCGA
* * * * *
3855267 GGGTAAAAGAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3855307 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3855346 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3855386 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* ** *
3855426 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGT-TA
1 -GGT-----A--AAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * ** *
3855474 GGGTAAAAGAT-TGGAT-TTCTTTAATCTACCCCATAATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3855514 GGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCC-CCATGGTCGA
* * *
3855554 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3855594 GGTAAAAGATCGGATGGTCTTCAATCGTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3855634 GGGTAAAAGAT-TGGAT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3855674 GGTAAAAGATCGGATGGTTTTCAATCTTGCCCTCTTGTTAG-
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3855715 GGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3855754 GGTAAAAGATCGGATGGTCTTCAATATTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * *
3855794 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3855834 GGTAAAAGATC-GAATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3855874 GGGTAAAAGAT-TGGCT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3855914 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * * *
3855954 GGGTAAATGAT-TGGAT-TTTTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3855994 GGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3856033 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCCG-
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGT-CGA
* * * * * *
3856073 GGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCCC-ATGGTCGA
* * * * * *
3856113 GGGTAAAACAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3856153 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3856192 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3856232 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* * * * * *
3856280 GATTAAAGATCGGATGTTCTTTAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3856320 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3856360 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3856400 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATTGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3856440 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3856480 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3856520 GGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3856561 GGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3856600 GGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * *
3856640 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3856680 GGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGG
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * * *
3856720 GGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3856760 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3856800 GGTAAAAGATCGGATGGTCTTCAATTTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3856839 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGT
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3856879 GGTAGAAGATCGGATGGTCTCCAATCTTCTCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGC-CC-CATGGTCGA
* * * * *
3856919 GGGTAAAAGAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3856959 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3856998 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3857038 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* ** *
3857078 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGT-TA
1 -GGT-----A--AAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * ** *
3857126 GGGTAAAAGAT-TGGAT-TTCTTTAATCTACCCCATAATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3857166 GGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCC-CCATGGTCGA
* * *
3857206 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3857246 GGTAAAAGATCGGATGGTCTTCAATCGTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3857286 GGGTAAAAGAT-TGGAT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3857326 GGTAAAAGATCGGATGGTTTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3857366 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3857406 GGTAAAAGATCGGATGGTCTTCAATATTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * * *
3857446 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3857486 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3857526 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCGTGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
** * * *
3857566 GGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * ** * *
3857606 GGGTAAAAGAT-TAAAT-TTCTTCAATCTGCCCCATAATGGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3857646 GGTAAAAGTTCGGATTGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3857686 GGGTAAAAGAT-TGGAT-TTTTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3857726 GGTAAAAGATCGGATGGTTTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3857766 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3857806 GGTAAAAGATCGGATGGTCTTCAATATTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* *
3857846 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGA
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3857886 GGTAAAAGATC-GAATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3857926 GGGTAAAAGAT-TGGCT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3857966 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * * *
3858006 GGGTAAATGAT-TGGAT-TTTTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3858046 GGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3858085 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCCG-
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGT-CGA
* * * * * *
3858125 GGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCCC-ATGGTCGA
* * * * * *
3858165 GGGTAAAACAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3858205 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3858244 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3858284 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* * * * * *
3858332 GATTAAAGATCGGATGTTCTTTAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3858372 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3858412 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3858452 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATTGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3858492 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3858532 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3858572 GGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3858613 GGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3858652 GGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * *
3858692 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3858732 GGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGG
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * * *
3858772 GGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3858812 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3858852 GGTAAAAGATCGGATGGTCTTTAATTTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3858891 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGT
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3858931 GGTAGAAGATCGGATGGTCTCCAATCTTCTCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGC-CC-CATGGTCGA
* * * * *
3858971 GGGTAAAAGAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3859011 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3859050 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3859090 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* ** *
3859130 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGT-TA
1 -GGT-----A--AAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * ** *
3859178 GGGTAAAAGAT-TGGAT-TTCTTTAATCTACCCCATAATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3859218 GGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCC-CCATGGTCGA
* * *
3859258 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3859298 GGTAAAAGATCGGATGGTCTTCAATCGTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3859338 GGGTAAAAGAT-TGGAT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3859378 GGTAAAAGATCGGATGGTTTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3859418 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3859458 GGTAAAAGATCGGATGGTCTTCAATATTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * * *
3859498 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3859538 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3859578 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCGTGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
** * * *
3859618 GGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * ** * *
3859658 GGGTAAAAGAT-TAAAT-TTCTTCAATCTGCCCCATAATGGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3859698 GGTAAAAGTTCGGATTGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3859738 GGGTAAAAGAT-TGGAT-TTTTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3859778 GGTAAAAGATCGGATGGTTTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3859818 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3859858 GGTAAAAGATCGGATGGTCTTCAATATTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* *
3859898 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGA
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3859938 GGTAAAAGATC-GAATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3859978 GGGTAAAAGAT-TGGCT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3860018 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * * *
3860058 GGGTAAATGAT-TGGAT-TTTTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3860098 GGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3860137 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCCG-
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGT-CGA
* * * * * *
3860177 GGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCCC-ATGGTCGA
* * * * * *
3860217 GGGTAAAACAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3860257 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3860296 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3860336 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* * * * * *
3860384 GATTAAAGATCGGATGTTCTTTAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3860424 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3860464 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3860504 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATTGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3860544 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3860584 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3860624 GGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3860665 GGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3860704 GGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * *
3860744 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3860784 GGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGG
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * * *
3860824 GGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3860864 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3860904 GGTAAAAGATCGGATGGTCTTCAATTTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3860943 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGT
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3860983 GGTAGAAGATCGGATGGTCTCCAATCTTCTCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGC-CC-CATGGTCGA
* * * * *
3861023 GGGTAAAAGAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3861063 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3861102 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3861142 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* ** *
3861182 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGT-TA
1 -GGT-----A--AAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * ** *
3861230 GGGTAAAAGAT-TGGAT-TTCTTTAATCTACCCCATAATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3861270 GGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCC-CCATGGTCGA
* * *
3861310 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3861350 GGTAAAAGATCGGATGGTCTTCAATCGTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3861390 GGGTAAAAGAT-TGGAT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3861430 GGTAAAAGATCGGATGGTTTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3861470 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3861510 GGTAAAAGATCGGATGGTCTTCAATATTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * * *
3861550 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3861590 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3861630 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCGTGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
** * * *
3861670 GGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * ** * *
3861710 GGGTAAAAGAT-TAAAT-TTCTTCAATCTGCCCCATAATGGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3861750 GGTAAAAGTTCGGATTGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3861790 GGGTAAAAGAT-TGGAT-TTTTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3861830 GGTAAAAGATCGGATGGTTTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3861870 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3861910 GGTAAAAGATCGGATGGTCTTCAATATTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * *
3861950 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3861990 GGTAAAAGATC-GAATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3862030 GGGTAAAAGAT-TGGCT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3862070 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * * *
3862110 GGGTAAATGAT-TGGAT-TTTTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3862150 GGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3862189 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCCG-
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGT-CGA
* * * * * *
3862229 GGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCCC-ATGGTCGA
* * * * * *
3862269 GGGTAAAACAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3862309 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3862348 GGGTAAAAGAT-TAGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3862388 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-C--A-T--GGT-CGA
* * * * * *
3862436 GATTAAAGATCGGATGTTCTTTAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3862476 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3862516 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3862556 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATTGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3862596 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3862636 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * **
3862676 GGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-TAGTTAA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3862717 GGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3862756 GGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * *
3862796 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3862836 GGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGG
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * * *
3862876 GGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3862916 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCTCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3862956 GGTAAAAGATCGGATGGTCTTCAATTTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * * *
3862995 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGT
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3863035 GGTAGAAGATCGGATGGTCTCCAATCTTCTCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGC-CC-CATGGTCGA
* * * * *
3863075 GGGTAAAAGAT-TGGAT-TTCTTCAATTTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3863115 GGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3863154 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3863194 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* ** *
3863234 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGT-TA
1 -GGT-----A--AAAGATCTGATGGTCTTCAATC-TGCCCCATGGTCGA
* * * ** *
3863282 GGGTAAAAGAT-TGGAT-TTCTTTAATCTACCCCATAATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3863322 GGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGAT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCC-CCATGGTCGA
* * *
3863362 GGGTAAAAGAT-TGAAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCTG-ATGGTCTTCAATCTGCCCCATGGTCGA
* *
3863402 GGTAAAAGATCGGATGGTCTTCAATCGTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3863442 GGGTAAAAGAT-TGGAT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3863482 GGTAAAAGATCGGATGGTTTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3863522 GGGTAAAAGAT-TGGAT-TTCTTCAATCTACCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3863562 GGTAAAAGATCGGATGGTCTTCAATATTACCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAAT-CTGCCC-CATGGTCGA
* * * *
3863602 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCTATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3863642 GGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3863682 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCGTGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
** * * *
3863722 GGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * ** * *
3863762 GGGTAAAAGAT-TAAAT-TTCTTCAATCTGCCCCATAATGGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * * *
3863802 GGTAAAAGTTCGGATTGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3863842 GGGTAAAAGAT-TGGAT-TTTTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3863882 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * * *
3863922 GGGTAAAAG-TTTAGAT-TTCTGT-AATCTGCCTCATGATCGG
1 -GGTAAAAGATCT-GATGGTCT-TCAATCTGCCCCATGGTCGA
* * *
3863962 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3864002 GGGTAAAAGAT-TGGCT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3864042 GGTAAAAGATCGGAGGGTCTTCAATCTTGCCCTC-TAGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3864082 GGGTAAAAGAT-TGGAT-TTCTTTAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3864122 GGTAAAAGATCGGATCGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * *
3864162 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
*
3864202 GGTAAAAGATC-GAATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 GGTAAAAGATCTG-ATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3864242 TGGTAAAAGAT-TGGAT-TTCTTCAATCTGTCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * * *
3864282 GGTAAAAGATCGGATGGTCTTCAATTTTACCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAA-TCTGCCC-CATGGTCGA
* * *
3864322 GGGTAAAAGAT-TGGAT-TTCTTCAATCTGCCCCATGATCGG
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* * *
3864362 GGTAAAAGATCGGATGGTCTTCAATCTTCCCTC-TGGT-TA
1 GGTAAAAGATCTGATGGTCTTCAATCTGCCC-CATGGTCGA
* * *
3864401 GGGTAAAAGAT-TGGAT-TTCTTTAATCTGCCCCATGATC-A
1 -GGTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
* *
3864440 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGT-TA
1 -GGTAAAAGATCTGATGGTCTTCAATC-TGCCC-CATGGTCGA
* * * *
3864481 GAGTAAAAGAT-TGGAT-TTCTTCAATCTGCCTCATGATCGG
1 G-GTAAAAGATCT-GATGGTCTTCAATCTGCCCCATGGTCGA
*
3864521 GGTAAAAGATCGGATGGTCTTCAATCTTGCCC
1 GGTAAAAGATCTGATGGTCTTCAATC-TGCCC
3864553 TCTGGTTAGG
Statistics
Matches: 11368, Mismatches: 2631, Indels: 3044
0.67 0.15 0.18
Matches are distributed among these distances:
36 2 0.00
37 4 0.00
38 211 0.02
39 3808 0.33
40 3758 0.33
41 2799 0.25
42 198 0.02
43 6 0.00
44 22 0.00
45 10 0.00
46 6 0.00
47 21 0.00
48 521 0.05
49 2 0.00
ACGTcount: A:0.26, C:0.19, G:0.23, T:0.32
Consensus pattern (40 bp):
GGTAAAAGATCTGATGGTCTTCAATCTGCCCCATGGTCGA
Found at i:3849173 original size:80 final size:80
Alignment explanation
Indices: 3848991--3863245 Score: 10444
Period size: 80 Copynumber: 177.2 Consensus size: 80
3848981 ATAACTTTAG
* * * * *
3848991 GGGTAAAAGATTAGATTGT-TTCAA-CTTGCCCCATGGTCGAGGTAAGAGATCTGATGGTCTTCA
1 GGGTAAAAGATTGGATT-TCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCA
* *
3849054 ATC-TGCCCTTTGGTTA
64 ATCTTGCCCTCTAGTTA
*
3849070 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3849135 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3849150 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAGAAGATTGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3849215 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* *
3849230 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCAAGATCGGGGTAAAAGATCGAATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3849295 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3849309 GGGTAAAAGATTGGATTTCTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3849374 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* * * * *
3849389 AGGTAAAAGATTGGATTTCTTCAATTTGCCCCACGATCGGGGTAGAAGATCGGATGGTCTTCAAC
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3849454 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* *
3849468 GGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTGAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3849533 CTTACCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * *
3849548 GGGTAAAAGATTGGATTTTTTCAATCTGCCTCATGATCGGGGTAAAAGATCGAATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3849613 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3849628 GGGTAAAAGATTGGATTTCTTCAATCTGTCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3849693 TTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
3849708 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3849773 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3849787 GGGTAAAAGATTGGATTTCTTCAATCTGTCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3849852 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* ** *
3849867 GGGTAAAAGATTGAAGATCGGATGGTCTTCAATCTTGCCTTC-T-AGTTAGGGTAAAAGATTGGA
1 GGGTAAAAGATTG--GAT----T--TCTTCAATC-TGCC-CCATGA-TCGGGGTAAAAGATCGGA
* * **
3849930 T-TTCTTCAATC-TACCC-C-ATGATCG
55 TGGTCTTCAATCTTGCCCTCTA-G-TTA
* * * * * ** * * *
3849954 GGGTAAAAAATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAAATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
**
3850017 ATC-TGCCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * * * ** * *
3850033 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCC-TCTAGTTAGGGTAAAAGATTGGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCCCAT-GA-TCGGGGTAAAAGATCGGATGGTCTTC
* **
3850096 AAT-TTACCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * * * * ** * * *
3850113 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTTTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
* **
3850176 ATC-TGTCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * **
3850192 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGT---A-A---AAGATCGGAT
* *
3850256 GGTCTTCAATCTTGCCTTCTGGTTA
56 GGTCTTCAATCTTGCCCTCTAGTTA
* *
3850281 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAAATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* * *
3850346 CTTTCCCT-TTGATAA
66 CTTGCCCTCTAG-TTA
*
3850361 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3850426 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* *
3850441 GGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATCGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3850506 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* * *
3850521 AGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGAGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* * *
3850586 ATTGCCCTCTAATTT
66 CTTGCCCTCTAGTTA
3850601 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3850666 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
3850680 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3850745 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * ** *
3850760 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCACTC-TGGTTAGGGTAAAAGATTGGAT
1 GGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-TGC-CCCATGATCGGGGTAAAAGATCGGAT
* * **
3850824 -TTCTTCAATC-TGCCC-CATAATCG
56 GGTCTTCAATCTTGCCCTC-TAGTTA
* * ** ** *
3850847 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTAGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3850910 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * ** * *
3850927 GGGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3850989 CAATC-TGCCC-CATAATCG
62 CAATCTTGCCCTC-TAGTTA
* ** * * * *
3851007 GGGTAAAAG-TTCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGAAT-TTTT
1 GGGTAAAAGATT-GGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCT
**
3851068 TCAATC-TGCCC-C-ATGATCG
61 TCAATCTTGCCCTCTA-G-TTA
* * * ** * ** *
3851087 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGTTTAGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3851150 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * ** * * *
3851167 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGCT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
**
3851229 CAATC-TGCCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
** * ** * *
3851247 GGGTAAAAGATAT-GAGGGTCTTCAATCTTGCCCTC-TGGTTATGGGTAAAAGATTGGAT-TTCT
1 GGGTAAAAGAT-TGGA-TTTCTTCAATC-TGCCC-CAT-GATCGGGGTAAAAGATCGGATGGTCT
**
3851309 TCAATC-TGCCC-C-ATGATCG
61 TCAATCTTGCCCTCTA-G-TTA
* * ** * *
3851328 GGGTAAAAGATCGGATCATCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3851390 CAATC-TACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * * ** * *
3851408 GGGAAAAAGATCGAATGGTATTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3851470 CAATC-TGTCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * ** * *
3851488 GGGTAAAAGATCGGATGGTCTTCAATTTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAA-TCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3851551 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * * * ** * *
3851568 GGGTAAAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
**
3851631 ATC-TGCCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * *** ** * *
3851647 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAAGGTAAAAGATTAGAT-TTCTTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3851710 AATC-TG-CCTC-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * ** * *
3851727 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3851790 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * * ** * * *
3851807 GGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGCT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3851869 TAATC-TGCCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * ** * * * *
3851887 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAATGATTGGAT-TTTTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3851950 AATC-TG-CCTC-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* ** * * ** * *
3851967 GGGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
* * *
3852030 ATC-TGCCCTAT-GATC
64 ATCTTGCCCTCTAGTTA
* * * * * * ** * * *
3852045 GGGTAGAAGATCGGATGGTCTTCAAACTTCCCTC-TGGTTAGGGTAAAACATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
* **
3852108 AT-TTACCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * * * ** * *
3852124 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGA-CTAGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATC-GGATGGTCTTC
**
3852186 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * * *
3852203 GGGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTAAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-----G-TAAAAGATCGGAT
* * *
3852267 GTTCTTTAATCTTGCCCTCTGGTTA
56 GGTCTTCAATCTTGCCCTCTAGTTA
* *
3852292 GGGTAAAAGATTGGATTTCTTCAATCTACCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3852357 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* *
3852372 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATTGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3852437 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3852452 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3852517 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3852532 AGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3852597 ATTGCCCTCTAGTTT
66 CTTGCCCTCTAGTTA
*
3852612 GGGTAAAAGATTGGATTTCTTCAATCTGTCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3852677 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* * *
3852692 GGGTAAAAGATTAGATTTCTTCAATCTGCCTCATGATCGGGGTAAACGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3852757 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
3852772 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3852837 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* * * **
3852852 AGGTAAAAGATTAGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATTAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3852917 ATTGCCCTCTAGTTT
66 CTTGCCCTCTAGTTA
* *
3852932 GGGTAAGAGATTGGATTTTTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3852997 CCTGTCCTCTAGTTA
66 CTTGCCCTCTAGTTA
*
3853012 GGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3853077 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * *
3853092 GGGTAAATGATTGGATTTCTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGCCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3853157 CTT-TCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * * *
3853171 GGG-AAAAGATTGGATTTCTTCCATCTGCCCTATGATCGGGGTAGAAGATCGGATCGTCTACAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* * *
3853235 CTTCCCCTTTGGTTA
66 CTTGCCCTCTAGTTA
* * * * * *
3853250 TGGTAAAAAATTAGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3853315 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3853329 AGGTAAAAGATTAGATTTCTTCAATCTTCCCCATGATCGGGGTAAAAGATCGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3853394 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* ** *
3853409 GGGTAAAAGATTAAAGATCGAATGTTCTTTAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGA
1 GGGTAAAAGATT---G---G-AT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGA
* *
3853472 T-TTCTTCAATC-TACCC-C-ATGATCT-
55 TGGTCTTCAATCTTGCCCTCTA-G-T-TA
* * ** * * *
3853496 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGAAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3853559 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * * * * * *** * * *
3853576 GGGTAAAAGATCGGATGGTCCTCAATCTTCCCCTCTGGTTAAGGTAAAAGATTGGAT-TTCTTTA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCCC-ATGATCGGGGTAAAAGATCGGATGGTCTTCA
* **
3853640 AT-TT-ACCTC-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * * * ** * ** *
3853656 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAGAGATTAGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
**
3853719 ATC-TGCCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * *
3853735 GGGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTAAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-----G-TAAAAGATCGGAT
* * *
3853799 GTTCTTCAATCTTGCGCTCTGGTTA
56 GGTCTTCAATCTTGCCCTCTAGTTA
* *
3853824 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3853889 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
*
3853904 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3853969 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3853984 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAACGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3854049 CTTGCCCTCTAGTT-
66 CTTGCCCTCTAGTTA
* *
3854063 GGGTAAAAGATTAGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3854128 ATTGCCCTCTAGTTT
66 CTTGCCCTCTAGTTA
*
3854143 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3854208 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
*
3854223 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGAGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3854288 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
** *
3854303 GGGTAAAAGATAAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTATTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3854368 CTT-CACTCT-GATTA
66 CTTGCCCTCTAG-TTA
3854382 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3854447 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * *
3854461 GGGTAAAAGATTGGATTTCTTTAATATGCCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3854526 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* *
3854540 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATCGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3854605 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* *
3854620 GGGTAAAAGATTGAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGTTAC--GGTAAAAGATTGG
1 GGGTAAAAGATTG--GAT----T--TCTTCAATC-TGCCC-CAT-GAT-CGGGGTAAAAGATCGG
* **
3854682 AT-TTCTTCAATC-TGCCC-C-ATGATCG
54 ATGGTCTTCAATCTTGCCCTCTA-G-TTA
* * *** * *
3854707 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAAGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3854769 CAATC-TACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * ** * *
3854787 GGGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-T-AGTTTGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
*
3854849 CAATC-TGCCC-C-ATGATCA
62 CAATCTTGCCCTCTA-G-TTA
* * ** * * * *
3854867 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAGGATAAAAGATTGAAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3854929 CAATC-GGCCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * ** * *
3854947 GGGTAAAAGATCGGATGGTCTTTAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
**
3855009 CAATC-TGCCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * *
3855027 GGGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGGGGTAAAAAATCGGATGGTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCA
*
3855091 ATCTTACCCTCTAGTTA
64 ATCTTGCCCTCTAGTTA
* *
3855108 GGGTAAAAGATTGAATTTCTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3855173 -TTTCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3855187 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGTGGTAGAAGATCGGATGGTCTCCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3855252 CTT-CTCCTCTGGTTA
66 CTTGC-CCTCTAGTTA
* * *
3855267 GGGTAAAAGATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3855332 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
3855346 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3855411 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* ** * ** *
3855426 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATTGGAT-
1 GGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGATG
* * * * **
3855490 TTCTTTAATC-TACCC-CATAATCG
57 GTCTTCAATCTTGCCCTC-TAGTTA
* * * ** * * *
3855513 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGATTAGGGTAAAAGATTGAAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCC-CCATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3855576 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * * ** * * *
3855593 GGGTAAAAGATCGGATGGTCTTCAATCGTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3855656 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * ** * *
3855673 GGGTAAAAGATCGGATGGTT-TTCAATCTTGCCCTCTTG-TTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT--TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTT
* **
3855735 CAATC-TACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * ** * *
3855753 GGGTAAAAGATCGGATGGTCTTCAATATTACCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
**
3855815 CAATC-TGCCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * ** * * *
3855833 GGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGCT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3855895 TAATC-TGCCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * ** * * * *
3855913 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAATGATTGGAT-TTTTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3855976 AATC-TG-CCTC-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* ** * * ** * *
3855993 GGGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
* **
3856056 ATC-TGCCCTAT-GATCC
64 ATCTTGCCCTCTAG-TTA
* * * * * * * ** * * *
3856072 GGGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGTTAGGGTAAAACATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCCC-ATGATCGGGGTAAAAGATCGGATGGTCTTCA
* **
3856136 AT-TTACCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * * * ** ** *
3856152 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTAGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
**
3856215 ATC-TGCCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * *
3856231 GGGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTAAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-----G-TAAAAGATCGGAT
* * *
3856295 GTTCTTTAATCTTGCCCTCTGGTTA
56 GGTCTTCAATCTTGCCCTCTAGTTA
* *
3856320 GGGTAAAAGATTGGATTTCTTCAATCTACCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3856385 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* *
3856400 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATTGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3856465 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3856480 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3856545 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3856560 AGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3856625 ATTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
3856640 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3856705 CTTGCCC-AT-GATTG
66 CTTGCCCTCTAG-TTA
* * * * ** * * *
3856719 GGGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-T-AGTTAGGGTAAAAGATTGAAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
**
3856781 CAATC-TG-CCTC-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * * ** * *
3856799 GGGTAAAAGATCGGATGGTCTTCAATTTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
* * *
3856862 ATC-TGCCCTAT-GATC
64 ATCTTGCCCTCTAGTTA
* * * * * * ** * *
3856877 GTGGTAGAAGATCGGATGGTCTCCAATCTTCTCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTT
1 G-GGTAAAAGATTGGAT-TTCTTCAATCTGC-CC-CATGATCGGGGTAAAAGATCGGATGGTCTT
* **
3856940 CAAT-TTACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * * ** * *
3856958 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
**
3857021 ATC-TGCCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * * *
3857037 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTAAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CAT-GATCGGG-----G-TAAAAGATCGGAT
* *
3857101 GGTCTTCAATCTTGCCCTTTGGTTA
56 GGTCTTCAATCTTGCCCTCTAGTTA
* * *
3857126 GGGTAAAAGATTGGATTTCTTTAATCTACCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3857191 CTTGCCATCT-GATTA
66 CTTGCCCTCTAG-TTA
*
3857206 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3857271 CGTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* *
3857286 GGGTAAAAGATTGGATTTCTTTAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTTTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3857351 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3857366 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3857431 ATTACCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3857446 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGGGGTAAAAGATCGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3857511 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * *
3857526 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCGTGATCGGGGTAAAAGATGGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3857591 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
** * * * *
3857606 GGGTAAAAGATTAAATTTCTTCAATCTGCCCCATAATGGGGGTAAAAGTTCGGATTGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3857671 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3857686 GGGTAAAAGATTGGATTTTTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTTTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3857751 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3857766 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3857831 ATTACCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3857846 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGAGGTAAAAGATCGAATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3857911 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3857926 GGGTAAAAGATTGGCTTTCTTTAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3857991 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3858006 GGGTAAATGATTGGATTTTTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGCCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3858071 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3858085 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCCGGGTAGAAGATCGGATGGTCTTCAAA
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3858150 CTTCCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3858165 GGGTAAAACATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3858230 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* *
3858244 GGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3858309 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* * ** *
3858324 GGGTAAAAGATTAAAGATCGGATGTTCTTTAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT
1 GGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGAT
* * **
3858388 -TTCTTCAATC-T-ACCTC-ATGATCG
56 GGTCTTCAATCTTGCCCTCTA-G-TTA
* * ** * * *
3858411 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGAAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
*
3858474 AATC-TGCCC-C-ATGATTG
63 AATCTTGCCCTCTA-G-TTA
* * * ** * *
3858491 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3858554 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
** * *** * *
3858571 GGGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-T-AGTTAAGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3858633 CAATC-TACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * ** * *
3858651 GGGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
**
3858713 CAATC-TGCCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * *
3858731 GGGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGGGGTAAAAAATCGGATGGTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCA
*
3858795 ATCTTACCCTCTAGTTA
64 ATCTTGCCCTCTAGTTA
* * *
3858812 GGGTAAAAGATTGAATTTCTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGTCTTTAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3858877 -TTTCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3858891 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGTGGTAGAAGATCGGATGGTCTCCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3858956 CTT-CTCCTCTGGTTA
66 CTTGC-CCTCTAGTTA
* * *
3858971 GGGTAAAAGATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3859036 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
3859050 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3859115 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* ** * ** *
3859130 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATTGGAT-
1 GGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGATG
* * * * **
3859194 TTCTTTAATC-TACCC-CATAATCG
57 GTCTTCAATCTTGCCCTC-TAGTTA
* * * ** * * *
3859217 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGATTAGGGTAAAAGATTGAAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCC-CCATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3859280 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * * ** * * *
3859297 GGGTAAAAGATCGGATGGTCTTCAATCGTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3859360 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* * ** * *
3859377 GGGTAAAAGATCGGATGGTT-TTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT--TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTT
* **
3859439 CAATC-TACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * ** * *
3859457 GGGTAAAAGATCGGATGGTCTTCAATATTACCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3859519 CAATC-TGCCCTAT-GATCG
62 CAATCTTGCCCTCTAG-TTA
* * * ** * *
3859537 GGGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3859600 AATC-TGCCC-CGT-GATCG
63 AATCTTGCCCTC-TAG-TTA
* * ** *** *
3859617 GGGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTAAAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3859679 CAATC-TGCCC-CATAATGG
62 CAATCTTGCCCTC-TAGTTA
** * * *
3859697 GGGTAAAAG-TTCGGATTGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTTT
1 GGGTAAAAGATT-GGATT-TCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCT
**
3859758 TCAATC-TGCCC-C-ATGATCG
61 TCAATCTTGCCCTCTA-G-TTA
* * ** * *
3859777 GGGTAAAAGATCGGATGGTT-TTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT--TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTT
* **
3859839 CAATC-TACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * ** * *
3859857 GGGTAAAAGATCGGATGGTCTTCAATATTACCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* *
3859919 CAATC-TGCCC-C-ATGATC
62 CAATCTTGCCCTCTA-GTTA
* * * ** * * *
3859936 GAGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGCT-TTCT
1 G-GGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCT
* **
3859998 TTAATC-TGCCC-C-ATGATCG
61 TCAATCTTGCCCTCTA-G-TTA
* * * ** * * * *
3860017 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAATGATTGGAT-TTTTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3860080 AATC-TG-CCTC-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
* ** * * ** * *
3860097 GGGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
* **
3860160 ATC-TGCCCTAT-GATCC
64 ATCTTGCCCTCTAG-TTA
* * * * * * * ** * * *
3860176 GGGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGTTAGGGTAAAACATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCCC-ATGATCGGGGTAAAAGATCGGATGGTCTTCA
* **
3860240 AT-TTACCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * * * ** ** *
3860256 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTAGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
**
3860319 ATC-TGCCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * *
3860335 GGGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTAAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-----G-TAAAAGATCGGAT
* * *
3860399 GTTCTTTAATCTTGCCCTCTGGTTA
56 GGTCTTCAATCTTGCCCTCTAGTTA
* *
3860424 GGGTAAAAGATTGGATTTCTTCAATCTACCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3860489 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* *
3860504 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATTGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3860569 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3860584 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3860649 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3860664 AGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3860729 ATTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
3860744 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3860809 CTTGCCC-AT-GATTG
66 CTTGCCCTCTAG-TTA
* * * * ** * * *
3860823 GGGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-T-AGTTAGGGTAAAAGATTGAAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
**
3860885 CAATC-TG-CCTC-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * * ** * *
3860903 GGGTAAAAGATCGGATGGTCTTCAATTTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
* * *
3860966 ATC-TGCCCTAT-GATC
64 ATCTTGCCCTCTAGTTA
* * * * * * ** * *
3860981 GTGGTAGAAGATCGGATGGTCTCCAATCTTCTCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTT
1 G-GGTAAAAGATTGGAT-TTCTTCAATCTGC-CC-CATGATCGGGGTAAAAGATCGGATGGTCTT
* **
3861044 CAAT-TTACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * * * ** * *
3861062 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCA
**
3861125 ATC-TGCCC-C-ATGATCG
64 ATCTTGCCCTCTA-G-TTA
* * * * *
3861141 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTAAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CAT-GATCGGG-----G-TAAAAGATCGGAT
* *
3861205 GGTCTTCAATCTTGCCCTTTGGTTA
56 GGTCTTCAATCTTGCCCTCTAGTTA
* * *
3861230 GGGTAAAAGATTGGATTTCTTTAATCTACCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3861295 CTTGCCATCT-GATTA
66 CTTGCCCTCTAG-TTA
*
3861310 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3861375 CGTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* *
3861390 GGGTAAAAGATTGGATTTCTTTAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTTTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3861455 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3861470 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3861535 ATTACCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3861550 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGGGGTAAAAGATCGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3861615 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * *
3861630 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCGTGATCGGGGTAAAAGATGGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3861695 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
** * * * *
3861710 GGGTAAAAGATTAAATTTCTTCAATCTGCCCCATAATGGGGGTAAAAGTTCGGATTGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3861775 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3861790 GGGTAAAAGATTGGATTTTTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTTTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3861855 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
*
3861870 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3861935 ATTACCCTCTAGTTA
66 CTTGCCCTCTAGTTA
*
3861950 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGAATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3862015 CTTGCCCTCTAGTTA
66 CTTGCCCTCTAGTTA
* *
3862030 GGGTAAAAGATTGGCTTTCTTTAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3862095 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3862110 GGGTAAATGATTGGATTTTTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGCCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3862175 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3862189 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCCGGGTAGAAGATCGGATGGTCTTCAAA
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3862254 CTTCCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3862269 GGGTAAAACATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3862334 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* *
3862348 GGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
3862413 CTTGCCCTCT-GATTA
66 CTTGCCCTCTAG-TTA
* * ** *
3862428 GGGTAAAAGATTAAAGATCGGATGTTCTTTAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT
1 GGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGAT
* * **
3862492 -TTCTTCAATC-T-ACCTC-ATGATCG
56 GGTCTTCAATCTTGCCCTCTA-G-TTA
* * ** * * *
3862515 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGAAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
*
3862578 AATC-TGCCC-C-ATGATTG
63 AATCTTGCCCTCTA-G-TTA
* * * ** * *
3862595 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTC
**
3862658 AATC-TGCCC-C-ATGATCG
63 AATCTTGCCCTCTA-G-TTA
** * *** * *
3862675 GGGTAAAAGATCAGATGGTCTTCAATCTTGCCCTC-T-AGTTAAGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
* **
3862737 CAATC-TACCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * ** * *
3862755 GGGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTT
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTT
**
3862817 CAATC-TGCCC-C-ATGATCG
62 CAATCTTGCCCTCTA-G-TTA
* * * *
3862835 GGGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGGGGTAAAAAATCGGATGGTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCA
*
3862899 ATCTTACCCTCTAGTTA
64 ATCTTGCCCTCTAGTTA
* *
3862916 GGGTAAAAGATTGAATTTCTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
* *
3862981 -TTTCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
* * * *
3862995 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGTGGTAGAAGATCGGATGGTCTCCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3863060 CTT-CTCCTCTGGTTA
66 CTTGC-CCTCTAGTTA
* * *
3863075 GGGTAAAAGATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3863140 CTT-CCCTCTGGTTA
66 CTTGCCCTCTAGTTA
3863154 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
*
3863219 CTTGCCCTCTGGTTA
66 CTTGCCCTCTAGTTA
3863234 GGGTAAAAGATT
1 GGGTAAAAGATT
3863246 AAAGATCGGA
Statistics
Matches: 12658, Mismatches: 1100, Indels: 835
0.87 0.08 0.06
Matches are distributed among these distances:
78 145 0.01
79 2582 0.20
80 8727 0.69
81 232 0.02
82 16 0.00
83 5 0.00
84 3 0.00
85 6 0.00
86 64 0.01
87 269 0.02
88 270 0.02
89 317 0.03
90 21 0.00
91 1 0.00
ACGTcount: A:0.26, C:0.19, G:0.23, T:0.32
Consensus pattern (80 bp):
GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
CTTGCCCTCTAGTTA
Found at i:3850546 original size:240 final size:239
Alignment explanation
Indices: 3848991--3864878 Score: 11149
Period size: 240 Copynumber: 65.7 Consensus size: 239
3848981 ATAACTTTAG
* * * * *
3848991 GGGTAAAAGATTAGATTGT-TTCAA-CTTGCCCCATGGTCGAGGTAAGAGATCTGATGGTCTTCA
1 GGGTAAAAGATTGGATT-TCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCA
* *
3849054 ATC-TGCCCTTTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAG
63 ATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAG
*
3849118 ATCAGATGGTCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCC
128 ATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCC
* * *
3849182 ATGATCGGGGTAGAAGATTGGATGGTCTTCAATCTTGCCCTCTGGTTA
192 ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* *
3849230 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCAAGATCGGGGTAAAAGATCGAATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* *
3849295 CTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCTCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3849359 CGGATGGTCTTCAATCTTGCCCTCT-AGTTAAGGTAAAAGATTGGATTTCTTCAATTTGCCCCAC
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* * *
3849423 GATCGGGGTAGAAGATCGGATGGTCTTCAACCTT-CCCTCTGGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* *
3849468 GGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTGAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * *
3849533 CTTACCCTCTGGTTAGGGTAAAAGATTGGATTTTTTCAATCTGCCTCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* *
3849598 CGAATGGTCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTGGATTTCTTCAATCTGTCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* * *
3849662 GATCGGGGTAAAAGATCAGATGGTCTTCAATTTTGCCCTCTGGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
3849708 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* *
3849773 CTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGTCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
3849837 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGAAGATCGGATGGTCTTCAATCT
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTG--GAT----T--TCTTCAATC-
* ** * * * **
3849902 TGCCTTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCG
186 TGCC-CCATGA-TCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * * ** * * *
3849954 GGGTAAAAAATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAAATTGGATTTCTTCAA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCAA
** * * * * * **
3850018 TC-TGCCC-C-ATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTTCCCC-TCTAGTTAGGGTA
64 TCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATCTGCCCCAT-GA-TCGGGGTA
* * * ** * * *
3850079 AAAGATTGGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGATCGGATGGTCTTCAATCT
124 AAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAATCT
* * ** * * * * **
3850141 TCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTTTTCAATC-TGTCCC-ATGATCG
187 GCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTG-CCCTCTGATTA
* * **
3850192 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGT---A-A---AAGATCGGAT
* * *
3850256 GGTCTTCAATCTTGCCTTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGG
56 -GTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGG
* * * * *
3850321 GGTAAAAAATCGGATGGTCTTCAATCTTTCCCTTTGATAAGGGTAAAAGATTGAATTTCTTCAAT
120 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAAT
3850386 CTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
185 CTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
*
3850441 GGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATCGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * *
3850506 CTTGCCCTCTAGTTAAGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGAGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3850571 CGGATGGTCTTCAATATTGCCCTCTAATTTGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
*
3850636 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTA
195 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
3850680 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * * **
3850745 CTTGCCCTCTGGTTAGGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCACTC-TGGTTAG
65 CTTGCCCTCTAGTTAGGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-TGC-CCCATGATCGG
* * * ** * *
3850809 GGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATAATCGGGGTAAAAGATCGGATGGTCTTCA
120 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCA
** ** * **
3850871 ATCTTGCCCTC-TGATTAGGGTAAAAGATTAGAT-TTCTTCAATC-TGCCC-CATGATCG
183 ATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * ** * *
3850927 GGGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
* ** * **
3850990 AATC-TGCCC-CATAATCGGGGTAAAAG-TTCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAGG
62 AATCTTGCCCTC-TAGTTAGGGTAAAAGATT-GGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG
* * * * ** * *
3851050 GTAAAAGATTGAAT-TTTTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAA
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAA
* ** * ** * **
3851112 TCTTGCCCTC-TGGTTAGGGTAAAAGTTTAGAT-TTCTTCAATC-TGCCC-CATGATCG
184 TC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * ** * * *
3851167 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGCTTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
** ** * **
3851230 AATC-TGCCC-C-ATGATCGGGGTAAAAGATAT-GAGGGTCTTCAATCTTGCCCTC-TGGTTATG
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGAT-TGGA-TTTCTTCAATC-TGCCC-CAT-GATCGG
* * ** * *
3851290 GGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATCATCTTCA
120 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCA
** * * * **
3851352 ATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCG
183 ATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * * ** * *
3851408 GGGAAAAAGATCGAATGGTATTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
* ** * * * * **
3851471 AATC-TGTCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATTTTGCCCTC-TGGTTAGGG
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAA-TCTGCCC-CATGATCGGGG
* * ** * *
3851532 TAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
122 TAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAAT
* * ** * * **
3851594 CTTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCG
185 CTGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * *** ** * *
3851647 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAAGGTAAAAGATTAGATTTCTTTA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCA
** * * **
3851711 ATC-TG-CCTC-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGT
63 ATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGT
* * ** * * *
3851772 AAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGAATGGTCTTCAATC
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAATC
** * * * * **
3851834 TTGCCCTC-T-AGTTAGGGTAAAAGATTGGCT-TTCTTTAATC-TGCCC-CATGATCG
186 -TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * ** * * * *
3851887 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAATGATTGGATTTTTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCA
** * ** * * **
3851951 ATC-TG-CCTC-ATGATCGGGGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGTTAGGGTA
63 ATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTA
* * * * * * * * *
3852012 AAAGATTGGAT-TTCTTCAATC-TGCCCTATGA-TCGGGTAGAAGATCGGATGGTCTTCAAACTT
124 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGAT-TTCTTCAATCTG
* ** * * * * **
3852074 CCCTC-TGGTTAGGGTAAAACATTGGAT-TTCTTCAAT-TTACCC-CATGATCG
188 CCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * * ** * *
3852124 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGA-CTAGATTTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATC-GGATGTCTTCA
** * * *
3852187 ATC-TGCCC-C-ATGATCGGGGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGATTAGGGT
63 ATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-
* * * *
3852248 AAAAGATTAAAGATCGGATGTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTT
121 ----G-TAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTT
* *
3852313 CAATCTACCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
181 CAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* *
3852372 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATTGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
*
3852437 CTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3852502 CAGATGGTCTTCAATCTTGCCCTCT-AGTTAAGGTAAAAGATTGGATTTCTTCAATCTACCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* *
3852566 GATCGGGGTAAAAGATCGGATGGTCTTCAATATTGCCCTCT-AGTTT
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
*
3852612 GGGTAAAAGATTGGATTTCTTCAATCTGTCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * *
3852677 CTTGCCCTCTAGTTAGGGTAAAAGATTAGATTTCTTCAATCTGCCTCATGATCGGGGTAAACGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
*
3852742 CGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
3852807 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCT-AGTTA
195 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
* * * **
3852852 AGGTAAAAGATTAGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATTAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * *
3852917 ATTGCCCTCTAGTTTGGGTAAGAGATTGGATTTTTTCAATCTGCCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3852982 CGGATGGTCTTCAATCCTGTCCTCT-AGTTAGGGTAAAAGATTAGATTTCTTCAATCTGCCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
*
3853046 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* * *
3853092 GGGTAAATGATTGGATTTCTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGCCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * * *
3853157 CTT-TCCTCTGGTTAGGG-AAAAGATTGGATTTCTTCCATCTGCCCTATGATCGGGGTAGAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * * * * * * * * *
3853220 CGGATCGTCTACAATCTTCCCCTTTGGTTATGGTAAAAAATTAGATTTCTTCAATTTACCCCATG
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
* *
3853285 ATCGGGGTAGAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTA
195 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* * *
3853329 AGGTAAAAGATTAGATTTCTTCAATCTTCCCCATGATCGGGGTAAAAGATCGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATG-TCTTCAAT
* *
3853394 CTTGCCCTCT-GATTAGGGTAAAAGATTAAAGATCGAATGTTCTTTAATCTTGCCCTC-T-AGTT
65 CTTGCCCTCTAG-TTAGGGTAAAAGATT---G---G-AT-TTCTTCAATC-TGCCC-CATGA-TC
* * * * * *
3853456 AGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCT-GGGTAAAAGATCGGATGGTCT
118 GGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGAT-TAGGGTAAAAGATTGGAT-TTCT
** * * * **
3853517 TCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGAAT-TTCTTCAATC-TGCCC-CATGATCG
180 TCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * * * *** * * *
3853576 GGGTAAAAGATCGGATGGTCCTCAATCTTCCCCTCTGGTTAAGGTAAAAGATTGGATTTCTTTAA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCCC-ATGATCGGGGTAAAAGATCGGATGTCTTCAA
* ** * * * * * **
3853641 T-TT-ACCTC-ATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAA
64 TCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
* ** * ** * *
3853702 GAGATTAGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGATCTTCAATCTT
125 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * *
3853764 GCCCTC-TGATTAGGGTAAAAGATTAAAGATCGGATGTTCTTCAATCTTGCGCTCTGGTTA
187 GCCC-CATGA-TCGGG-----G-TAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* *
3853824 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
*
3853889 CTTGCCCTCT-GATTAGGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGA
65 CTTGCCCTCTAG-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGA
*
3853953 TCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
129 TCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
*
3854018 GATCGGGGTAAACGATCGGATGGTCTTCAATCTTGCCCTCT-AGTT-
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
* *
3854063 GGGTAAAAGATTAGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * *
3854128 ATTGCCCTCTAGTTTGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATAATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
3854193 CGGATGGTCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
*
3854257 GATCGAGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCT-AGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
** *
3854303 GGGTAAAAGATAAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTATTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
*
3854368 CTT-CACTCT-GATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGA
65 CTTGCCCTCTAG-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGA
* * *
3854431 TCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAATATGCCCCAT
129 TCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* *
3854495 GATCGGGGTAGAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
*
3854540 GGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGATCGGATCGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
*
3854605 CTTGCCCTCT-GATTAGGGTAAAAGATTGAAGATCGGATGGTCTTCAATCTTGCCCTC-TAGTTA
65 CTTGCCCTCTAG-TTAGGGTAAAAGATTG--GAT----T--TCTTCAATC-TGCCC-CAT-GAT-
* * ** * *
3854668 C--GGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCT
117 CGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCT
*** * * * **
3854728 TCAATCTTGCCCTC-T-AGTTAAGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCG
180 TCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * ** * *
3854787 GGGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-T-AGTTTGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
* * * **
3854850 AATC-TGCCC-C-ATGATCAGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAGG
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG
* * * * * ** * * *
3854910 ATAAAAGATTGAAT-TTCTTCAATC-GGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTTAA
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAA
** * * **
3854972 TCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCG
184 TC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * *
3855027 GGGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGGGGTAAAAAATCGGATGGTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCA
* * *
3855091 ATCTTACCCTCTAGTTAGGGTAAAAGATTGAATTTCTTCAATCTGCCTCATGATCGGGGTAAAAG
63 ATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAG
* * *
3855156 ATCGGATGGTCTTCAAT-TTTCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCTA
128 ATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCA
* * * *
3855220 TGATCGTGGTAGAAGATCGGATGGTCTCCAATCTT-CTCCTCTGGTTA
193 TGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGC-CCTCTGATTA
* * *
3855267 GGGTAAAAGATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
*
3855332 CTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* *
3855396 CGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTAAAGATCGGATGGTCTTCAATCT
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-
** * ** * * * * * **
3855461 TGCCCTTTGGTTAGGGTAAAAGATTGGAT-TTCTTTAATC-TACCC-CATAATCG
186 TGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * ** * * *
3855513 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGATTAGGGTAAAAGATTGAATTTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCC-CCATGATCGGGGTAAAAGATCGGATGTCTTCA
** * * * **
3855577 ATC-TGCCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCGTGCCCTC-TGGTTAGGGT
63 ATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGT
* * * ** *
3855638 AAAAGATTGGAT-TTCTTTAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTT-TTCAAT
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT--TTCTTCAAT
* ** * * * **
3855699 CTTGCCCTCTTG-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCG
185 C-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * ** * *
3855753 GGGTAAAAGATCGGATGGTCTTCAATATTACCCTC-T-AGTTAGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
** * * * **
3855816 AATC-TGCCC-C-ATGATCGGGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTC-T-AGTTAGG
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG
* * * * ** * *
3855876 GTAAAAGATTGGCT-TTCTTTAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAA
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAA
* ** * * * * **
3855938 TCTTGCCCTC-TGGTTAGGGTAAATGATTGGAT-TTTTTCAATC-TG-CCTCATGATCG
184 TC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* ** * * ** * *
3855993 GGGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGATTTCTTCAA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCAA
* ** * * * * * * * **
3856057 TC-TGCCCTAT-GATCCGGGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGTTAGGGTAAA
64 TCTTGCCCTCTAG-TTAGGGTAAAAGATTGGAT-TTCTTCAATCTGCCCC-ATGATCGGGGTAAA
* * * * ** * * * *
3856120 ACATTGGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTTC
126 AGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAATCTGC
* ** ** * **
3856182 CCTC-TGGTTAGGGTAAAAGATTAGAT-TTCTTCAATC-TGCCC-CATGATCG
189 CC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * *
3856231 GGGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTAAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-----G-TAAAAGATCGGAT
* * * *
3856295 GTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACCTCATGATCGG
56 G-TCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGG
*
3856360 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGAATTTCTTCAAT
120 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAAT
* *
3856425 CTGCCCCATGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTA
185 CTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
*
3856480 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* *
3856545 CTTGCCCTCTAGTTAAGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
*
3856610 CGGATGGTCTTCAATATTGCCCTCT-AGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* *
3856674 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCC-ATGATTG
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* * * * ** * * *
3856719 GGGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-T-AGTTAGGGTAAAAGATTGAATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
** * * * * * **
3856782 AATC-TG-CCTC-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATTTTCCCTC-TGGTTAGGGT
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGT
* * * * * * * *
3856843 AAAAGATTGGAT-TTCTTCAATC-TGCCCTATGA-TCGTGGTAGAAGATCGGATGGTCTCCAATC
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAG-GGTAAAAGATTGGAT-TTCTTCAATC
* * ** * * * **
3856905 TTCTCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-TTACCC-CATGATCG
186 TGC-CC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * * ** * *
3856958 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGATTTCTTCAA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCAA
** * * * *
3857022 TC-TGCCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTA
64 TCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CAT-GATCGGG--
* * * *
3857083 AAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATTGGATTTCTTT
121 ---G-TAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTC
* * *
3857148 AATCTACCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCATCTGATTA
182 AATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
*
3857206 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * *
3857271 CGTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAATCTGCCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3857336 CGGATGGTTTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACCCCATG
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
* *
3857401 ATCGGGGTAAAAGATCGGATGGTCTTCAATATTACCCTCT-AGTTA
195 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
*
3857446 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGGGGTAAAAGATCGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATG-TCTTCAAT
* *
3857511 CTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCGTGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * **
3857576 GGGATGATCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTAAATTTCTTCAATCTGCCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* * * *
3857640 AATGGGGGTAAAAGTTCGGATTGTCTTCAATCTTGCCCTCT-AGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
* *
3857686 GGGTAAAAGATTGGATTTTTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTTTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* *
3857751 CTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* *
3857816 CGGATGGTCTTCAATATTACCCTCT-AGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* *
3857880 GATCGAGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTCT-AGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
* *
3857926 GGGTAAAAGATTGGCTTTCTTTAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * *
3857991 CTTGCCCTCTGGTTAGGGTAAATGATTGGATTTTTTCAATCTGCCTCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3858056 CGGATGGCCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCTATG
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
* * * * *
3858120 ATCCGGGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGTTA
195 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* * * *
3858165 GGGTAAAACATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* *
3858230 CTT-CCCTCTGGTTAGGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* *
3858294 CGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTAAAGATCGGATGTTCTTTAATCT
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-
* ** * * * **
3858359 TGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T-ACCTCATGATCG
186 TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * ** * * *
3858411 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGAATTTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCA
* * * * **
3858475 ATC-TGCCC-C-ATGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGT
63 ATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGT
* * ** ** *
3858536 AAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCAGATGGTCTTCAATC
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAATC
*** * * * **
3858598 TTGCCCTC-T-AGTTAAGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCG
186 -TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * ** * *
3858651 GGGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-T-AGTTAGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
** * * *
3858714 AATC-TGCCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGGGGT
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCCATGATCGGGGT
* * *
3858775 AAAAAATCGGATGGTCTTCAATCTTACCCTCT-AGTTAGGGTAAAAGATTGAATTTCTTCAATCT
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCT
* * * *
3858839 GCCTCATGATCGGGGTAAAAGATCGGATGGTCTTTAAT-TTTCCCTCTGGTTA
187 GCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* * * *
3858891 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGTGGTAGAAGATCGGATGGTCTCCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * *
3858956 CTT-CTCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGA
65 CTTGC-CCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGA
*
3859020 TCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
129 TCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
*
3859084 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* ** * ** * *
3859130 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATTGGATT
1 GGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGATG
* * * ** * * * *
3859195 TCTTTAATC-TACCC-CATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGATT
57 TCTTCAATCTTGCCCTC-TAGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCC-CCATGATC
* * * * ** * *
3859257 AGGGTAAAAGATTGAAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTT
118 GGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTT
* ** * * * **
3859319 CAATCGTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTTAATC-TGCCC-CATGATCG
181 CAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * ** * *
3859377 GGGTAAAAGATCGGATGGTT-TTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT--TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTC
* ** * * * * **
3859440 AATC-TACCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATATTACCCTC-T-AGTTAGG
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGG
* * * ** * *
3859500 GTAAAAGATTGGAT-TTCTTCAATC-TGCCCTATGATCGGGGTAAAAGATCGGATGATCTTCAAT
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGAT-TTCTTCAAT
* ** * * **
3859563 CTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CGTGATCG
185 C-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * ** *** *
3859617 GGGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTAAATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
* ** **
3859680 AATC-TGCCC-CATAATGGGGGTAAAAG-TTCGGATTGTCTTCAATCTTGCCCTC-T-AGTTAGG
62 AATCTTGCCCTC-TAGTTAGGGTAAAAGATT-GGATT-TCTTCAATC-TGCCC-CATGA-TCGGG
* * * ** *
3859740 GTAAAAGATTGGAT-TTTTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTT-TTCA
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT--TTCTTCA
* ** * * * **
3859801 ATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCG
183 ATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * ** * *
3859857 GGGTAAAAGATCGGATGGTCTTCAATATTACCCTC-T-AGTTAGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
* * * * * **
3859920 AATC-TGCCC-C-ATGATCGAGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTC-T-AGTTAGG
62 AATCTTGCCCTCTA-GTTAG-GGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG
* * * * ** * *
3859980 GTAAAAGATTGGCT-TTCTTTAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAA
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAA
* ** * * * * **
3860042 TCTTGCCCTC-TGGTTAGGGTAAATGATTGGAT-TTTTTCAATC-TG-CCTCATGATCG
184 TC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* ** * * ** * *
3860097 GGGTAAAAGATCGGATGGCCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGATTTCTTCAA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCAA
* ** * * * * * * * **
3860161 TC-TGCCCTAT-GATCCGGGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGTTAGGGTAAA
64 TCTTGCCCTCTAG-TTAGGGTAAAAGATTGGAT-TTCTTCAATCTGCCCC-ATGATCGGGGTAAA
* * * * ** * * * *
3860224 ACATTGGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTTC
126 AGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAATCTGC
* ** ** * **
3860286 CCTC-TGGTTAGGGTAAAAGATTAGAT-TTCTTCAATC-TGCCC-CATGATCG
189 CC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * *
3860335 GGGTAAAAGATCGGATGATCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTAAAGATCGGAT
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-----G-TAAAAGATCGGAT
* * * *
3860399 GTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACCTCATGATCGG
56 G-TCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGG
*
3860464 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGAATTTCTTCAAT
120 GGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAAT
* *
3860529 CTGCCCCATGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTA
185 CTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
*
3860584 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCAGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* *
3860649 CTTGCCCTCTAGTTAAGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
*
3860714 CGGATGGTCTTCAATATTGCCCTCT-AGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* *
3860778 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCC-ATGATTG
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* * * * ** * * *
3860823 GGGTAAAAAATCGGATGGTCTTCAATCTTACCCTC-T-AGTTAGGGTAAAAGATTGAATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
** * * * * * **
3860886 AATC-TG-CCTC-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATTTTCCCTC-TGGTTAGGGT
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGT
* * * * * * * *
3860947 AAAAGATTGGAT-TTCTTCAATC-TGCCCTATGA-TCGTGGTAGAAGATCGGATGGTCTCCAATC
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAG-GGTAAAAGATTGGAT-TTCTTCAATC
* * ** * * * **
3861009 TTCTCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-TTACCC-CATGATCG
186 TGC-CC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * * ** * *
3861062 GGGTAGAAGATCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAAAAGATTGGATTTCTTCAA
1 GGGTAAAAGATTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCAA
** * * * *
3861126 TC-TGCCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTA
64 TCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CAT-GATCGGG--
* * * *
3861187 AAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATTGGATTTCTTT
121 ---G-TAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTC
* * *
3861252 AATCTACCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCATCTGATTA
182 AATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
*
3861310 GGGTAAAAGATTGAATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * *
3861375 CGTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAATCTGCCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3861440 CGGATGGTTTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACCCCATG
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
* *
3861505 ATCGGGGTAAAAGATCGGATGGTCTTCAATATTACCCTCT-AGTTA
195 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
*
3861550 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGGGGTAAAAGATCGGATGATCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATG-TCTTCAAT
* *
3861615 CTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCGTGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * **
3861680 GGGATGATCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTAAATTTCTTCAATCTGCCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
* * * *
3861744 AATGGGGGTAAAAGTTCGGATTGTCTTCAATCTTGCCCTCT-AGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
* *
3861790 GGGTAAAAGATTGGATTTTTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTTTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* *
3861855 CTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* *
3861920 CGGATGGTCTTCAATATTACCCTCT-AGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
130 CGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
*
3861984 GATCGGGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTCT-AGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTA
* *
3862030 GGGTAAAAGATTGGCTTTCTTTAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * *
3862095 CTTGCCCTCTGGTTAGGGTAAATGATTGGATTTTTTCAATCTGCCTCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3862160 CGGATGGCCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCTATG
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATG
* * * * *
3862224 ATCCGGGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGTTA
195 ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* * * *
3862269 GGGTAAAACATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* *
3862334 CTT-CCCTCTGGTTAGGGTAAAAGATTAGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* *
3862398 CGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTAAAGATCGGATGTTCTTTAATCT
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-
* ** * * * **
3862463 TGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T-ACCTCATGATCG
186 TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * ** * * *
3862515 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGAATTTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCA
* * * * **
3862579 ATC-TGCCC-C-ATGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGT
63 ATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGT
* * ** ** *
3862640 AAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCAGATGGTCTTCAATC
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAATC
*** * * * **
3862702 TTGCCCTC-T-AGTTAAGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCG
186 -TGCCC-CATGA-TCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * ** * *
3862755 GGGTAAAAGATCGGATGGTCTTCAATATTGCCCTC-T-AGTTAGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
** * * *
3862818 AATC-TGCCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTG-CCCATGATTGGGGT
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCCATGATCGGGGT
* * *
3862879 AAAAAATCGGATGGTCTTCAATCTTACCCTCT-AGTTAGGGTAAAAGATTGAATTTCTTCAATCT
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGGATTTCTTCAATCT
* * *
3862943 GCCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT-TTTCCCTCTGGTTA
187 GCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* * * *
3862995 GGGTAAAAGATTGGATTTCTTCAATCTGCCCTATGATCGTGGTAGAAGATCGGATGGTCTCCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * *
3863060 CTT-CTCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATTTACCCCATGATCGGGGTAGAAGA
65 CTTGC-CCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGA
*
3863124 TCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
129 TCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCAT
*
3863188 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTA
194 GATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
* ** * ** * *
3863234 GGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATTGGATT
1 GGGTAAAAGA-T-----T-GGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAAAAGATCGGATG
* * * ** * * * *
3863299 TCTTTAATC-TACCC-CATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCATC-TGATT
57 TCTTCAATCTTGCCCTC-TAGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCC-CCATGATC
* * * * ** * *
3863361 AGGGTAAAAGATTGAAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTT
118 GGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTT
* ** * * * **
3863423 CAATCGTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTTAATC-TGCCC-CATGATCG
181 CAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * ** * *
3863481 GGGTAAAAGATCGGATGGTT-TTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGATTTCTTC
1 GGGTAAAAGATTGGAT--TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTC
* ** * * * * **
3863544 AATC-TACCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATATTACCCTC-T-AGTTAGG
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGG
* * * ** * *
3863604 GTAAAAGATTGGAT-TTCTTCAATC-TGCCCTATGATCGGGGTAAAAGATCGGATGATCTTCAAT
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGAT-TTCTTCAAT
* ** * * **
3863667 CTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CGTGATCG
185 C-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * ** *** *
3863721 GGGTAAAAGATGGGATGATCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTAAATTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
* ** **
3863784 AATC-TGCCC-CATAATGGGGGTAAAAG-TTCGGATTGTCTTCAATCTTGCCCTC-T-AGTTAGG
62 AATCTTGCCCTC-TAGTTAGGGTAAAAGATT-GGATT-TCTTCAATC-TGCCC-CATGA-TCGGG
* * * ** * *
3863844 GTAAAAGATTGGAT-TTTTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAA
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAA
* ** * ** * **
3863906 TCTTGCCCTC-TGGTTAGGGTAAAAGTTTAGAT-TTCTGT-AATC-TG-CCTCATGATCG
184 TC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCT-TCAATCTTGCCCTC-TGATTA
* * ** * * *
3863961 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAAAAGATTGGCTTTCTTC
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAAAAGATCGGATGTCTTC
** * ** **
3864024 AATC-TGCCC-C-ATGATCGGGGTAAAAGATCGGAGGGTCTTCAATCTTGCCCTC-T-AGTTAGG
62 AATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGA-TTTCTTCAATC-TGCCC-CATGA-TCGGG
* * * ** * *
3864084 GTAAAAGATTGGAT-TTCTTTAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATCGTCTTCAA
121 GTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAA
* ** * * **
3864146 TCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCG
184 TC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * * *** * *
3864201 GGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTC-TGGTTATGGTAAAAGATTGGATTTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCA
* ** * * * * * **
3864265 ATC-TGTCC-C-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATTTTACCCTC-TGGTTAGGGT
63 ATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAA-TCTGCCC-CATGATCGGGGT
* * ** * *
3864326 AAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATC
123 AAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTGGAT-TTCTTCAATC
* * ** * * * *
3864388 TTCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTTAATC-TGCCC-CATGATCA
186 TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTA
* * * ** * * *
3864440 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGAGTAAAAGATTGGATTTCTTCA
1 GGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGTCTTCA
** * *
3864504 ATC-TG-CCTC-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTA
63 ATCTTGCCCTCTA-G-TTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-C-----------
* *
3864566 AAAGATTAGATTTATCAGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAA
112 ----A-T-G----ATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAA
* *
3864631 AGATTGGCTTTCTTTAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCC
167 AGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCC
*
3864696 TCTGGTTA
232 TCTGATTA
* *
3864704 GGGTAAATGATTGGATTTCTTCAATCTGCCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAAT
1 GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGAT-GTCTTCAAT
* * * * *
3864769 CTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTTTTCAATCTGTCTCATGTTCGGGGTAAAAGAT
65 CTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGAT
* * *
3864834 CGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGCAAAAGATTGGA
130 CGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3864879 GGTTGTAATT
Statistics
Matches: 13472, Mismatches: 1554, Indels: 1245
0.83 0.10 0.08
Matches are distributed among these distances:
236 69 0.01
237 232 0.02
238 1195 0.09
239 2611 0.19
240 5793 0.43
241 359 0.03
242 12 0.00
243 4 0.00
244 18 0.00
245 49 0.00
246 550 0.04
247 1115 0.08
248 903 0.07
249 357 0.03
250 16 0.00
256 1 0.00
257 1 0.00
261 20 0.00
262 63 0.00
263 56 0.00
264 42 0.00
265 6 0.00
ACGTcount: A:0.26, C:0.19, G:0.23, T:0.32
Consensus pattern (239 bp):
GGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATCGGATGTCTTCAATC
TTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAAAAGATC
GGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGATTTCTTCAATCTGCCCCATGA
TCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA
Found at i:3852279 original size:48 final size:48
Alignment explanation
Indices: 3852208--3852303 Score: 165
Period size: 48 Copynumber: 2.0 Consensus size: 48
3852198 GATCGGGGTA
3852208 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
* * *
3852256 AAAGATCGGATGTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
3852304 GGATTTCTTC
Statistics
Matches: 45, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
48 45 1.00
ACGTcount: A:0.29, C:0.16, G:0.22, T:0.33
Consensus pattern (48 bp):
AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
Found at i:3853444 original size:48 final size:48
Alignment explanation
Indices: 3853373--3853468 Score: 149
Period size: 48 Copynumber: 2.0 Consensus size: 48
3853363 GATCGGGGTA
*
3853373 AAAGATCGGATGATCTTCAATCTTGCCCTCT-GATTAGGGTAAAAGATT
1 AAAGATCGAATGATCTTCAATCTTGCCCTCTAG-TTAGGGTAAAAGATT
* *
3853421 AAAGATCGAATGTTCTTTAATCTTGCCCTCTAGTTAGGGTAAAAGATT
1 AAAGATCGAATGATCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATT
3853469 GGATTTCTTC
Statistics
Matches: 44, Mismatches: 3, Indels: 2
0.90 0.06 0.04
Matches are distributed among these distances:
48 43 0.98
49 1 0.02
ACGTcount: A:0.31, C:0.16, G:0.20, T:0.33
Consensus pattern (48 bp):
AAAGATCGAATGATCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATT
Found at i:3853811 original size:48 final size:48
Alignment explanation
Indices: 3853740--3853835 Score: 165
Period size: 48 Copynumber: 2.0 Consensus size: 48
3853730 GATCGGGGTA
3853740 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
* * *
3853788 AAAGATCGGATGTTCTTCAATCTTGCGCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
3853836 GGATTTCTTC
Statistics
Matches: 45, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
48 45 1.00
ACGTcount: A:0.29, C:0.16, G:0.23, T:0.32
Consensus pattern (48 bp):
AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
Found at i:3854656 original size:48 final size:48
Alignment explanation
Indices: 3854585--3854680 Score: 158
Period size: 48 Copynumber: 2.0 Consensus size: 48
3854575 ATCGGGGTAA
*
3854585 AAGATCGGATCGTCTTCAATCTTGCCCTCT-GATTAGGGTAAAAGATTG
1 AAGATCGGATCGTCTTCAATCTTGCCCTCTAG-TTACGGTAAAAGATTG
*
3854633 AAGATCGGATGGTCTTCAATCTTGCCCTCTAGTTACGGTAAAAGATTG
1 AAGATCGGATCGTCTTCAATCTTGCCCTCTAGTTACGGTAAAAGATTG
3854681 GATTTCTTCA
Statistics
Matches: 45, Mismatches: 2, Indels: 2
0.92 0.04 0.04
Matches are distributed among these distances:
48 44 0.98
49 1 0.02
ACGTcount: A:0.27, C:0.19, G:0.23, T:0.31
Consensus pattern (48 bp):
AAGATCGGATCGTCTTCAATCTTGCCCTCTAGTTACGGTAAAAGATTG
Found at i:3855461 original size:48 final size:48
Alignment explanation
Indices: 3855390--3855485 Score: 183
Period size: 48 Copynumber: 2.0 Consensus size: 48
3855380 GATCGGGGTA
3855390 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
*
3855438 AAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
3855486 GGATTTCTTT
Statistics
Matches: 47, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
48 47 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.32
Consensus pattern (48 bp):
AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
Found at i:3856307 original size:48 final size:48
Alignment explanation
Indices: 3856236--3856331 Score: 165
Period size: 48 Copynumber: 2.0 Consensus size: 48
3856226 GATCGGGGTA
3856236 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
* * *
3856284 AAAGATCGGATGTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
3856332 GGATTTCTTC
Statistics
Matches: 45, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
48 45 1.00
ACGTcount: A:0.29, C:0.16, G:0.22, T:0.33
Consensus pattern (48 bp):
AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
Found at i:3857113 original size:48 final size:48
Alignment explanation
Indices: 3857042--3857137 Score: 183
Period size: 48 Copynumber: 2.0 Consensus size: 48
3857032 GATCGGGGTA
3857042 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
*
3857090 AAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
3857138 GGATTTCTTT
Statistics
Matches: 47, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
48 47 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.32
Consensus pattern (48 bp):
AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
Found at i:3858359 original size:48 final size:48
Alignment explanation
Indices: 3858288--3858383 Score: 165
Period size: 48 Copynumber: 2.0 Consensus size: 48
3858278 GATCGGGGTA
3858288 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
* * *
3858336 AAAGATCGGATGTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
3858384 GGATTTCTTC
Statistics
Matches: 45, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
48 45 1.00
ACGTcount: A:0.29, C:0.16, G:0.22, T:0.33
Consensus pattern (48 bp):
AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
Found at i:3859165 original size:48 final size:48
Alignment explanation
Indices: 3859094--3859189 Score: 183
Period size: 48 Copynumber: 2.0 Consensus size: 48
3859084 GATCGGGGTA
3859094 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
*
3859142 AAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
3859190 GGATTTCTTT
Statistics
Matches: 47, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
48 47 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.32
Consensus pattern (48 bp):
AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
Found at i:3860411 original size:48 final size:48
Alignment explanation
Indices: 3860340--3860435 Score: 165
Period size: 48 Copynumber: 2.0 Consensus size: 48
3860330 GATCGGGGTA
3860340 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
* * *
3860388 AAAGATCGGATGTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
3860436 GGATTTCTTC
Statistics
Matches: 45, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
48 45 1.00
ACGTcount: A:0.29, C:0.16, G:0.22, T:0.33
Consensus pattern (48 bp):
AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
Found at i:3861217 original size:48 final size:48
Alignment explanation
Indices: 3861146--3861241 Score: 183
Period size: 48 Copynumber: 2.0 Consensus size: 48
3861136 GATCGGGGTA
3861146 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
*
3861194 AAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
3861242 GGATTTCTTT
Statistics
Matches: 47, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
48 47 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.32
Consensus pattern (48 bp):
AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
Found at i:3862463 original size:48 final size:48
Alignment explanation
Indices: 3862392--3862487 Score: 165
Period size: 48 Copynumber: 2.0 Consensus size: 48
3862382 GATCGGGGTA
3862392 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
* * *
3862440 AAAGATCGGATGTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
3862488 GGATTTCTTC
Statistics
Matches: 45, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
48 45 1.00
ACGTcount: A:0.29, C:0.16, G:0.22, T:0.33
Consensus pattern (48 bp):
AAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATT
Found at i:3863269 original size:48 final size:48
Alignment explanation
Indices: 3863198--3863293 Score: 183
Period size: 48 Copynumber: 2.0 Consensus size: 48
3863188 GATCGGGGTA
3863198 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
*
3863246 AAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
3863294 GGATTTCTTT
Statistics
Matches: 47, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
48 47 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.32
Consensus pattern (48 bp):
AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATT
Found at i:3863380 original size:80 final size:80
Alignment explanation
Indices: 3863246--3864578 Score: 2220
Period size: 80 Copynumber: 16.7 Consensus size: 80
3863236 GTAAAAGATT
* * *
3863246 AAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATTGGATTTCTTTAATCTAC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
*
3863311 CCCATAATCGGGGTA
66 CCCATGATCGGGGTA
* * *
3863326 AAAGATCGGATGGTCTTCAATCTTGCCATCTGATTAGGGTAAAAGATTGAATTTCTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3863391 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
* *
3863406 AAAGATCGGATGGTCTTCAATCGTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3863471 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
* *
3863486 AAAGATCGGATGGTTTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTAC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3863551 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
* * *
3863566 AAAGATCGGATGGTCTTCAATATTACCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
*
3863631 CCTATGATCGGGGTA
66 CCCATGATCGGGGTA
*
3863646 AAAGATCGGATGATCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
*
3863711 CCCGTGATCGGGGTA
66 CCCATGATCGGGGTA
* * * **
3863726 AAAGATGGGATGATCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTAAATTTCTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
* *
3863791 CCCATAATGGGGGTA
66 CCCATGATCGGGGTA
* * * *
3863806 AAAGTTCGGATTGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTTTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3863871 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
* *
3863886 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGTTTAGATTTCTGT-AATCTG
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCT-TCAATCTG
*
3863950 CCTCATGATCGGGGTA
65 CCCCATGATCGGGGTA
* *
3863966 AAAGATCGGATGGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGCTTTCTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3864031 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
* * *
3864046 AAAGATCGGAGGGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTTAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3864111 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
*
3864126 AAAGATCGGATCGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3864191 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
* * *
3864206 AAAGATCGAATGGTCTTCAATCTTGCCCTCTGGTTATGGTAAAAGATTGGATTTCTTCAATCTGT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3864271 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
* *
3864286 AAAGATCGGATGGTCTTCAATTTTACCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
3864351 CCCATGATCGGGGTA
66 CCCATGATCGGGGTA
*
3864366 AAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
*
3864430 CCCATGATCAGGGTA
66 CCCATGATCGGGGTA
*
3864445 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGAGTAAAAGATTGGATTTCTTCAATCTGC
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
*
3864510 CTCATGATCGGGGTA
66 CCCATGATCGGGGTA
*
3864525 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTAGATTT
1 AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTT
3864579 ATCAGGGTAA
Statistics
Matches: 1169, Mismatches: 81, Indels: 6
0.93 0.06 0.00
Matches are distributed among these distances:
79 78 0.07
80 1090 0.93
81 1 0.00
ACGTcount: A:0.25, C:0.19, G:0.24, T:0.32
Consensus pattern (80 bp):
AAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
CCCATGATCGGGGTA
Found at i:3863510 original size:160 final size:159
Alignment explanation
Indices: 3849880--3864878 Score: 11254
Period size: 160 Copynumber: 93.3 Consensus size: 159
3849870 TAAAAGATTG
* * *
3849880 AAGATCGGATGGTCTTCAATCTTGCCTTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3849945 CCATGATCGGGGTAAAAAATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAAATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
*
3850009 TTTCTTCAATCTGCCCCATGATCGGGGTAG
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * *
3850039 AAGATCGGATGGTCTTCAATCTTCCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATTTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3850104 CCATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* *
3850168 TTTTTTCAATCTGTCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3850198 AAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGAAGATCGGATGGTCTTC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTG--GAT----T--TCTTC
* * * * * * **
3850263 AATCTTGCCTTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTA
58 AATC-TGCC-CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTA
* * * * ** **
3850325 AAAAATCGGATGGTCTTCAATCTTTCCCTTTGATAAGGGTAA
120 AAAGATTGGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAA
* * * * ** * *
3850367 AAGATTGAAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* ** * **
3850429 GCCCTCTGATTAGGGTAAAAGATTAGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGAT
63 GCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * ***
3850491 CGGATCGTCTTCAATCTTGCCCTC-T-AGTTAAGGTAA
126 TGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAA
* * * * * * * *
3850527 AAGATTGGAT-TTCTTCAATC-TACCC-CAT-GATCGGAGTAAAAGATCGGATGGTCTTCAATAT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGG-GTAAAAGATTGGAT-TTCTTCAAT-C
* * * * **
3850588 TGCCCTCTAATTTGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGA
62 TGCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * * **
3850650 TCGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAA
125 TTGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
* * * ** * *
3850686 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * *
3850748 GCCCTCTGGTTAGGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCACTCTGGTTAGGGTA
63 GCCC-CTGATT-GGG-----G-TAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTA
*
3850813 AAAGATTGGATTTCTTCAATCTGCCCCATAATCGGGGTAA
120 AAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3850853 AAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTAGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3850918 CCATGATCGGGGTAAAAGATGGGATGATCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
*
3850982 ATTTCTTCAATCTGCCCCATAATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * *
3851013 AAGTTCGGATGGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGAATTTTTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3851078 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGTTTAGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3851143 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3851173 AAGATCGGATGGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGCTTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* ** * *
3851238 CCATGATCGGGGTAAAAGATATGAGGGTCTTCAATCTTGCCCTCTGGTTATGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTA-GGGTAAAAGATTGG
3851303 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
** * *
3851334 AAGATCGGATCATCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3851399 CCATGATCGGGGAAAAAGATCGAATGGTATTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
*
3851463 ATTTCTTCAATCTGTCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3851494 AAGATCGGATGGTCTTCAATTTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* *
3851559 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3851623 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3851653 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAAGGTAAAAGATTAGATTTCTTTAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* *
3851718 TCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
66 -CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3851783 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * *
3851813 AAGATCGAATGGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGCTTTCTTTAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3851878 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAATGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* *
3851943 TTTTTTCAATCTGCCTCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3851973 AAGATCGGATGGCCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * * * *
3852037 CTATGA-TCGGGTAGAAGATCGGATGGTCTTCAAACTT-CCCTCTGGTTAGGGTAAAACATTGGA
66 C-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* * *
3852100 TTTCTTCAATTTACCCCATGATCGGGGTAG
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3852130 AAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGACTAGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* *
3852194 CCATGATCGGGGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTAAA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGA-T---
* * **
3852259 GATCGGATGTTCTTTAATCTTGCCCTC-TGGTTAGGGTAA
126 --T-GGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * ** * *
3852298 AAGATTGGAT-TTCTTCAATC-T-ACCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * *
3852360 GCCCTCTGATTAGGGTAAAAGATTGAAT-TTCTTCAATC-TGCCC-CATGATTGGGGTAAAAGAT
63 GCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * * **
3852422 CGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * ** ** *
3852458 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCAGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
** * * * **
3852520 GCCCTCT-AGTTAAGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGA
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * **
3852581 TCGGATGGTCTTCAATATTGCCCTC-T-AGTTTGGGTAA
125 TTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAA
* * * * ** * *
3852618 AAGATTGGAT-TTCTTCAATC-TGTCCC-ATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTG-CCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* ** * ** *
3852680 GCCCTCT-AGTTAGGGTAAAAGATTAGAT-TTCTTCAATC-TG-CCTCATGATCGGGGTAAACGA
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * **
3852741 TCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAA
125 TTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * ** * *
3852778 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
** ** * * **
3852840 GCCCTCT-AGTTAAGGTAAAAGATTAGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGA
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * **
3852901 TTAGATGGTCTTCAATATTGCCCTC-T-AGTTTGGGTAA
125 TTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAA
* * * * * ** * *
3852938 GAGATTGGAT-TTTTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCCT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-CT
* * ** * **
3853000 GTCCTCT-AGTTAGGGTAAAAGATTAGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGA
63 G-CCCCTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * **
3853061 TCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAA
125 TTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * ** * **
3853098 ATGATTGGAT-TTCTTCAATC-TG-CCTCATGATCGGGGTAAAAGATCGGATGGCCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * * * * * ** * *
3853160 TCCTCTGGTTAGGG-AAAAGATTGGAT-TTCTTCCATC-TGCCCTATGATCGGGGTAGAAGATCG
63 GCCCCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTG
* * * * * ***
3853222 GATCGTCTACAATCTTCCCCTTTGGTTATGGTAA
128 GAT-TTCTTCAATCTGCCCC-ATGATCGGGGTAA
* ** * * * ** * * * *
3853256 AAAATTAGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATCTG
* ** ** * ** *
3853318 CCCTCTGGTTAAGGTAAAAGATTAGAT-TTCTTCAATCTT-CCC-CATGATCGGGGTAAAAGATC
64 CCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATT
* * *
3853380 GGATGATCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTA
127 GGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-----G-TAA
* * * * *
3853422 AAGATCGAATGTTCTTTAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
*
3853487 CCATGATCT-GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGA
66 CC-TGAT-TGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGG
3853551 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * * * *
3853582 AAGATCGGATGGTCCTCAATCTTCCCCTCTGGTTAAGGTAAAAGATTGGATTTCTTTAATTTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * * * *
3853647 TCATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAGAGATTAGA
66 -CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3853711 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3853741 AAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTAAAGATCGGATGTTCTTC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGA-T-----T-GGAT-TTCTTC
* * * * * * **
3853806 AATCTTGCGCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTA
58 AATC-TGC-CCCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTA
** * **
3853868 AAAGATCAGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAA
120 AAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * ** * *
3853910 AAGATTGAAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * ** *
3853972 GCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAACGAT
63 GCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * *
3854034 CGGATGGTCTTCAATCTTGCCCTC-T-AGT-TGGGTAA
126 TGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAA
** * * * ** * * *
3854069 AAGATTAGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATATT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-CT
* * * * **
3854131 GCCCTCT-AGTTTGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATAATCGGGGTAAAAGA
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * **
3854192 TCGGATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAA
125 TTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAA
* * * * * *
3854229 AAGATTGGAT-TTCTTCAATC-TGCCC-CAT-GATCGAGGTAAAAGATCGGATGGTCTTCAATCT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAG-GGTAAAAGATTGGAT-TTCTTCAATC-
* ** * **
3854290 TGCCCTCT-AGTTAGGGTAAAAGATAAGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAG
62 TGCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAG
* * * * * **
3854351 ATCGGATGGTATTCAATCTTCACTC-TGATTAGGGTAA
124 ATTGGAT-TTCTTCAATCTGC-CCCATGATCGGGGTAA
* * * ** * * *
3854388 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATCTG
* * * * * * ** * *
3854450 CCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTTAAT-ATGCCC-CATGATCGGGGTAGAAGATC
64 CCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATT
* * * **
3854512 GGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAA
127 GGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
* * * * ** * *
3854546 AAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGATCGGATCGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* *
3854608 GCCCTCTGATTAGGGTAAAAGATTGAAGATCGGATGGTCTTCAATCTTGCCCTCT-AGTTACGGT
63 GCCC-CTGATTGGGGT---A-A---AAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGT
3854672 AAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAA
119 AAAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3854713 AAGATCGGATGGTCTTCAATCTTGCCCTCTAGTTAAGGTAAAAGATTGGATTTCTTCAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3854778 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATATTGCCCTCT-AGTTTGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
*
3854842 ATTTCTTCAATCTGCCCCATGATCAGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * *
3854873 AAGATCGGATGGTCTTCAATCTTGCCCTCTAGTTAGGATAAAAGATTGAATTTCTTCAATCGGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* *
3854938 CCATGATCGGGGTAAAAGATCGGATGGTCTTTAATCTTGCCCTCT-AGTTAGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
3855002 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * * * * *
3855033 AAGATCGGATGGTCTTCAATCTTGCCC-ATGATTGGGGTAAAAAATCGGATGGTCTTCAATCTTA
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TG
* * * * **
3855097 CCCTCT-AGTTAGGGTAAAAGATTGAAT-TTCTTCAATC-TG-CCTCATGATCGGGGTAAAAGAT
64 CCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * * * * **
3855158 CGGATGGTCTTCAATTTTCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
* * * * * * * * * *
3855193 AAGATTGGAT-TTCTTCAATC-TGCCCTAT-GATCGTGGTAGAAGATCGGATGGTCTCCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAG-GGTAAAAGATTGGAT-TTCTTCAATCTG
* * * * * ** *
3855255 CTCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGAT
64 C-CC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * * * **
3855317 CGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
* * * ** * *
3855352 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * *
3855414 GCCCTCTGGTTAGGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTA
63 GCCC-CTGATT-GGG-----G-TAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTA
* * *
3855479 AAAGATTGGATTTCTTTAATCTACCCCATAATCGGGGTAA
120 AAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3855519 AAGATCGGATGGTCTTCAATCTTGCCATCTGATTAGGGTAAAAGATTGAATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3855584 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCGTGCCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
*
3855649 TTTCTTTAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3855679 AAGATCGGATGGTTTTCAATCTTGCCCTCTTGTTAGGGTAAAAGATTGGATTTCTTCAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3855744 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATATTACCCTCT-AGTTAGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
3855808 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * *
3855839 AAGATCGAATGGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGCTTTCTTTAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3855904 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAATGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* *
3855969 TTTTTTCAATCTGCCTCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3855999 AAGATCGGATGGCCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* ** * * * * *
3856063 CTATGATCCGGGTAGAAGATCGGATGGTCTTCAAACTTCCCCTCTGGTTAGGGTAAAACATTGGA
66 C-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* * *
3856128 TTTCTTCAATTTACCCCATGATCGGGGTAG
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3856158 AAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTAGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* *
3856222 CCATGATCGGGGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTAAA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGA-T---
* * **
3856287 GATCGGATGTTCTTTAATCTTGCCCTC-TGGTTAGGGTAA
126 --T-GGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * ** * *
3856326 AAGATTGGAT-TTCTTCAATC-T-ACCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * *
3856388 GCCCTCTGATTAGGGTAAAAGATTGAAT-TTCTTCAATC-TGCCC-CATGATTGGGGTAAAAGAT
63 GCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * * **
3856450 CGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * ** ** *
3856486 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCAGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
** * * * **
3856548 GCCCTCT-AGTTAAGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGA
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * **
3856609 TCGGATGGTCTTCAATATTGCCCTC-T-AGTTAGGGTAA
125 TTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAA
* * * ** * *
3856646 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * *
3856708 GCCCATGATTGGGGTAAAAAATCGGATGGTCTTCAATCTTACCCTCT-AGTTAGGGTAAAAGATT
63 GCCCCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATT
* *
3856772 GAATTTCTTCAATCTGCCTCATGATCGGGGTAA
127 GGATTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3856805 AAGATCGGATGGTCTTCAAT-TTTCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * * * *
3856869 CTATGATCGTGGTAGAAGATCGGATGGTCTCCAATCTT-CTCCTCTGGTTAGGGTAAAAGATTGG
66 C-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGC-CCTCTGATTAGGGTAAAAGATTGG
* * *
3856933 ATTTCTTCAATTTACCCCATGATCGGGGTAG
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
3856964 AAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* *
3857028 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTAAA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGA-T---
* ** * **
3857093 GATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAA
126 --T-GGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAA
* * * * ** ** * *
3857132 AAGATTGGAT-TTCTTTAATC-TACCC-CATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * * **
3857194 GCCATCTGATTAGGGTAAAAGATTGAAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGAT
63 GCC-CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * * **
3857256 CGGATGGTCTTCAATCGTGCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * ** *
3857292 AAGATTGGAT-TTCTTTAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTT-TTCAATCT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT--TTCTTCAATC-
* * * * * **
3857353 TGCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGA
62 TGCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * * **
3857415 TCGGATGGTCTTCAATATTACCCTC-T-AGTTAGGGTAA
125 TTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAA
* * * * ** * *
3857452 AAGATTGGAT-TTCTTCAATC-TGCCCTATGATCGGGGTAAAAGATCGGATGATCTTCAATCTTG
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TG
* * * * ** *
3857515 CCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CGTGATCGGGGTAAAAGATG
64 CCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATT
* **
3857577 GGATGATCTTCAATCTTGCCCTC-T-AGTTAGGGTAA
127 GGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAA
*** * ** **
3857612 AAGATTAAAT-TTCTTCAATC-TGCCC-CATAATGGGGGTAAAAG-TTCGGATTGTCTTCAATCT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATT-GGATT-TCTTCAATC-
* * * * **
3857673 TGCCCTCT-AGTTAGGGTAAAAGATTGGAT-TTTTTCAATC-TGCCC-CATGATCGGGGTAAAAG
62 TGCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAG
* * **
3857734 ATCGGATGGTT-TTCAATCTTGCCCTC-TGGTTAGGGTAA
124 ATTGGAT--TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * ** * * *
3857772 AAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATATT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-CT
* * * * *
3857834 ACCCTCT-AGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGAGGTAAAAG
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAG-GGTAAAAG
* * * **
3857894 ATCGAATGGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAA
124 ATTGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAA
* * * * * ** * *
3857932 AAGATTGGCT-TTCTTTAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * * * **
3857994 GCCCTCTGGTTAGGGTAAATGATTGGAT-TTTTTCAATC-TG-CCTCATGATCGGGGTAAAAGAT
63 GCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* ** * * **
3858056 CGGATGGCCTTCAATCTTCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
* * * * ** * * * * *
3858091 AAGATTGGAT-TTCTTCAATC-TGCCCTATGATCCGGGTAGAAGATCGGATGGTCTTCAAACTTC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TG
* * * * * * ** * *
3858154 CCCTCTGGTTAGGGTAAAACATTGGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGATC
64 CCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATT
* * * **
3858216 GGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAA
127 GGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
** * * ** * *
3858250 AAGATTAGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGATCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * *
3858312 GCCCTCTGATTAGGGTAAAAGATTAAAGATCGGATGTTCTTTAATCTTGCCCTCTGGTTAGGGTA
63 GCCC-CTGATT-GGG-----G-TAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTA
* *
3858377 AAAGATTGGATTTCTTCAATCTACCTCATGATCGGGGTAA
120 AAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3858417 AAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGAATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
*
3858482 CCATGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3858547 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * *
3858577 AAGATCAGATGGTCTTCAATCTTGCCCTCTAGTTAAGGTAAAAGATTGGATTTCTTCAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* *
3858642 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATATTGCCCTCT-AGTTAGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
3858706 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * * * * *
3858737 AAGATCGGATGGTCTTCAATCTTGCCC-ATGATTGGGGTAAAAAATCGGATGGTCTTCAATCTTA
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TG
* * * * **
3858801 CCCTCT-AGTTAGGGTAAAAGATTGAAT-TTCTTCAATC-TG-CCTCATGATCGGGGTAAAAGAT
64 CCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * * * * * **
3858862 CGGATGGTCTTTAATTTTCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
* * * * * * * * * *
3858897 AAGATTGGAT-TTCTTCAATC-TGCCCTAT-GATCGTGGTAGAAGATCGGATGGTCTCCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAG-GGTAAAAGATTGGAT-TTCTTCAATCTG
* * * * * ** *
3858959 CTCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGAT
64 C-CC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * * * **
3859021 CGGATGGTCTTCAATCTTCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATCTGCCC-CATGATCGGGGTAA
* * * ** * *
3859056 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * *
3859118 GCCCTCTGGTTAGGGTAAAAGATTAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTA
63 GCCC-CTGATT-GGG-----G-TAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTA
* * *
3859183 AAAGATTGGATTTCTTTAATCTACCCCATAATCGGGGTAA
120 AAAGATTGGATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3859223 AAGATCGGATGGTCTTCAATCTTGCCATCTGATTAGGGTAAAAGATTGAATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3859288 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCGTGCCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
*
3859353 TTTCTTTAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3859383 AAGATCGGATGGTTTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3859448 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATATTACCCTCT-AGTTAGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
*
3859512 ATTTCTTCAATCTGCCCTATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3859543 AAGATCGGATGATCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * **
3859608 CCGTGATCGGGGTAAAAGATGGGATGATCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTAA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
* *
3859672 ATTTCTTCAATCTGCCCCATAATGGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * *
3859703 AAGTTCGGATTGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTTTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3859768 CCATGATCGGGGTAAAAGATCGGATGGTTTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
*
3859833 TTTCTTCAATCTACCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3859863 AAGATCGGATGGTCTTCAATATTACCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3859928 CCATGATCGAGGTAAAAGATCGAATGGTCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
* *
3859992 CTTTCTTTAATCTGCCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3860023 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAATGATTGGATTTTTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3860088 TCATGATCGGGGTAAAAGATCGGATGGCCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGA
66 -CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* * *
3860152 TTTCTTCAATCTGCCCTATGATCCGGGTAG
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * * *
3860182 AAGATCGGATGGTCTTCAAACTTCCCCTCTGGTTAGGGTAAAACATTGGATTTCTTCAATTTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3860247 CCATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTAGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3860311 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3860341 AAGATCGGATGATCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTAAAGATCGGATGTTCTTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGA-T-----T-GGAT-TTCTTC
* * * * * **
3860406 AATCTTGCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T-ACCTCATGATCGGGGTA
58 AATC-TGCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTA
* * **
3860468 AAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAA
120 AAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * * * *
3860510 AAGATTGAAT-TTCTTCAATC-TGCCC-CATGATTGGGGTAAAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * **
3860572 GCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGAT
63 GCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
** * ***
3860634 CAGATGGTCTTCAATCTTGCCCTC-T-AGTTAAGGTAA
126 TGGAT-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAA
* * * * ** * * *
3860670 AAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATATT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-CT
* * * **
3860732 GCCCTCT-AGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGA
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * *
3860793 TCGGATGGTCTTCAATCTTG-CCCATGATTGGGGTAA
125 TTGGAT-TTCTTCAATC-TGCCCCATGATCGGGGTAA
* * * *
3860829 AAAATCGGATGGTCTTCAATCTTACCCTCTAGTTAGGGTAAAAGATTGAATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3860894 TCATGATCGGGGTAAAAGATCGGATGGTCTTCAAT-TTTCCCTCTGGTTAGGGTAAAAGATTGGA
66 -CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* * *
3860958 TTTCTTCAATCTGCCCTATGATCGTGGTAG
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3860988 AAGATCGGATGGTCTCCAATCTT-CTCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATTTAC
1 AAGATCGGATGGTCTTCAATCTTGC-CCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGC
* * *
3861052 CCCATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGG
65 CCC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGG
3861116 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3861147 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTAAAGATCGGATGGTCTTC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGA-T-----T-GGAT-TTCTTC
* * * * * * * * **
3861212 AATCTTGCCCTTTGGTTAGGGTAAAAGATTGGAT-TTCTTTAATC-TACCC-CATAATCGGGGTA
58 AATC-TGCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTA
* * * **
3861274 AAAGATCGGATGGTCTTCAATCTTGCCATC-TGATTAGGGTAA
120 AAAGATTGGAT-TTCTTCAATC-TGCC-CCATGATCGGGGTAA
* * * * ** * *
3861316 AAGATTGAAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATCGT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * * **
3861378 GCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTTAATC-TGCCC-CATGATCGGGGTAAAAGAT
63 GCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGAT
* * **
3861440 CGGATGGTT-TTCAATCTTGCCCTC-TGGTTAGGGTAA
126 TGGAT--TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * ** * * *
3861476 AAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGATCGGATGGTCTTCAATATT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAAT-CT
* * * * * **
3861538 ACCCTCT-AGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCTATGATCGGGGTAAAAGAT
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGAT
* * * **
3861600 CGGATGATCTTCAATCTTGCCCTC-TGGTTAGGGTAA
126 TGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * ** * *
3861636 AAGATTGGAT-TTCTTCAATC-TGCCC-CGTGATCGGGGTAAAAGATGGGATGATCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* *** * * **
3861698 GCCCTCT-AGTTAGGGTAAAAGATTAAAT-TTCTTCAATC-TGCCC-CATAATGGGGGTAAAAG-
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
**
3861758 TTCGGATTGTCTTCAATCTTGCCCTC-T-AGTTAGGGTAA
125 TT-GGATT-TCTTCAATC-TGCCC-CATGA-TCGGGGTAA
* * * * ** *
3861796 AAGATTGGAT-TTTTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGGATGGTT-TTCAATCT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT--TTCTTCAATC-
* * * * * **
3861857 TGCCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TACCC-CATGATCGGGGTAAAAGA
62 TGCCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * * **
3861919 TCGGATGGTCTTCAATATTACCCTC-T-AGTTAGGGTAA
125 TTGGAT-TTCTTCAAT-CTGCCC-CATGA-TCGGGGTAA
* * * ** * * *
3861956 AAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATCGAATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-T
* * * * * **
3862018 GCCCTCT-AGTTAGGGTAAAAGATTGGCT-TTCTTTAATC-TGCCC-CATGATCGGGGTAAAAGA
63 GCCC-CTGA-TTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGA
* * * **
3862079 TCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAA
125 TTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAA
* * * * * ** * ** *
3862116 ATGATTGGAT-TTTTTCAATC-TG-CCTCATGATCGGGGTAAAAGATCGGATGGCCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATCTG
* * * * * ** * *
3862178 CCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCTATGATCCGGGTAGAAGATCG
64 CCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTG
* * * * * **
3862241 GATGGTCTTCAAACTTCCCCTCTGGTTAGGGTAA
128 GAT-TTCTTCAATCTGCCCC-ATGATCGGGGTAA
* * * * * ** * * * *
3862275 AACATTGGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATCTG
* * ** * ** *
3862337 CCCTCTGGTTAGGGTAAAAGATTAGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATC
64 CCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATT
* * *
3862399 GGATGATCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATTA
127 GGAT-TTCTTCAATC-TGCCC-CATGA-TCGGG-----G-TAA
* * *
3862441 AAGATCGGATGTTCTTTAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3862506 TCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGAA
66 -CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
*
3862571 TTTCTTCAATCTGCCCCATGATTGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
3862601 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3862666 CCATGATCGGGGTAAAAGATCAGATGGTCTTCAATCTTGCCCTCT-AGTTAAGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
*
3862730 ATTTCTTCAATCTACCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3862761 AAGATCGGATGGTCTTCAATATTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * * *
3862826 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCC-ATGATTGGGGTAAAAAATCGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* * **
3862890 TGGTCTTCAATCTTACCCTC-T-AGTTAGGGTAA
130 T-TTCTTCAATC-TGCCC-CATGA-TCGGGGTAA
* * * * ** * * * *
3862922 AAGATTGAAT-TTCTTCAATC-TG-CCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAATTTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATCTG
* * * * * * * *
3862984 CCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCCTATGA-TCGTGGTAGAAGATC
64 CCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAG-GGTAAAAGATT
* * * * **
3863046 GGATGGTCTCCAATCTTCTCCTC-TGGTTAGGGTAA
127 GGAT-TTCTTCAATCTGC-CC-CATGATCGGGGTAA
* * * * ** * * * *
3863081 AAGATTGGAT-TTCTTCAAT-TTACCC-CATGATCGGGGTAGAAGATCGGATGGTCTTCAATCTT
1 AAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTGGAT-TTCTTCAATCTG
* * * * ** *
3863143 CCCTCTGGTTAGGGTAAAAGATTGGAT-TTCTTCAATC-TGCCC-CATGATCGGGGTAAAAGATC
64 CCC-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGATTAGGGTAAAAGATT
* * * *
3863205 GGATGGTCTTCAATCTTGCCCTC-TGGTTAGGGTAAAAGATTA
127 GGAT-TTCTTCAATC-TGCCC-CAT-GATCGGG-----G-TAA
* * *
3863247 AAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGTAAAAGATTGGATTTCTTTAATCTACC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3863312 CCATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCATCTGATTAGGGTAAAAGATTGAA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3863377 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3863407 AAGATCGGATGGTCTTCAATCGTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3863472 CCATGATCGGGGTAAAAGATCGGATGGTTTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
*
3863537 TTTCTTCAATCTACCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3863567 AAGATCGGATGGTCTTCAATATTACCCTCTAGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3863632 CTATGATCGGGGTAAAAGATCGGATGATCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGA
66 C-CTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
*
3863697 TTTCTTCAATCTGCCCCGTGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* * * **
3863727 AAGATGGGATGATCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTAAATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * * *
3863792 CCATAATGGGGGTAAAAGTTCGGATTGTCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTGG
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTGG
*
3863856 ATTTTTTCAATCTGCCCCATGATCGGGGTAA
129 ATTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3863887 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGTTTAGATTTCTGT-AATCTGC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCT-TCAATCTGC
* *
3863951 CTCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCT-AGTTAGGGTAAAAGATTG
65 C-CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGA-TTAGGGTAAAAGATTG
*
3864015 GCTTTCTTCAATCTGCCCCATGATCGGGGTAA
128 GATTTCTTCAATCTGCCCCATGATCGGGGTAA
* * *
3864047 AAGATCGGAGGGTCTTCAATCTTGCCCTCTAGTTAGGGTAAAAGATTGGATTTCTTTAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3864112 CCATGATCGGGGTAAAAGATCGGATCGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3864177 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3864207 AAGATCGAATGGTCTTCAATCTTGCCCTCTGGTTATGGTAAAAGATTGGATTTCTTCAATCTGTC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTG-C
* * * * *
3864272 CCATGATCGGGGTAAAAGATCGGATGGTCTTCAATTTTACCCTCTGGTTAGGGTAAAAGATTGGA
65 CCCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
3864337 TTTCTTCAATCTGCCCCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3864367 AAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
** * *
3864431 CCATGATCAGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGAGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
*
3864496 TTTCTTCAATCTGCCTCATGATCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
*
3864526 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTAGA--T-TT--A--T---
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* *
3864581 -C--A---GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGCT
66 CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGAT
*
3864640 TTCTTTAATCTGCCCCATGATCGGGGTAA
131 TTCTTCAATCTGCCCCATGATCGGGGTAA
*
3864669 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAATGATTGGATTTCTTCAATCTGCC
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
* * *
3864734 CCATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGA
66 CC-TGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGA
* * * *
3864799 TTTTTTCAATCTGTCTCATGTTCGGGGTAA
130 TTTCTTCAATCTGCCCCATGATCGGGGTAA
* *
3864829 AAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGCAAAAGATTGGA
1 AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGA
3864879 GGTTGTAATT
Statistics
Matches: 13008, Mismatches: 1347, Indels: 969
0.85 0.09 0.06
Matches are distributed among these distances:
143 130 0.01
145 1 0.00
146 3 0.00
148 1 0.00
149 1 0.00
150 1 0.00
153 1 0.00
154 1 0.00
155 1 0.00
156 1 0.00
157 127 0.01
158 381 0.03
159 3064 0.24
160 7092 0.55
161 298 0.02
162 6 0.00
163 2 0.00
164 1 0.00
165 17 0.00
166 181 0.01
167 751 0.06
168 590 0.05
169 343 0.03
170 14 0.00
ACGTcount: A:0.26, C:0.19, G:0.23, T:0.32
Consensus pattern (159 bp):
AAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTCAATCTGCC
CCTGATTGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGATTAGGGTAAAAGATTGGAT
TTCTTCAATCTGCCCCATGATCGGGGTAA
Found at i:3864716 original size:80 final size:80
Alignment explanation
Indices: 3864583--3864878 Score: 495
Period size: 80 Copynumber: 3.7 Consensus size: 80
3864573 AGATTTATCA
*
3864583 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGCTTTCTTTAA
1 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAA
3864648 TCTGCCCCATGATCG
66 TCTGCCCCATGATCG
* *
3864663 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAATGATTGGATTTCTTCAA
1 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAA
*
3864728 TCTGCCCCATAATCG
66 TCTGCCCCATGATCG
3864743 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTT-TTTCA
1 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTT-A
* * *
3864807 ATCTGTCTCATGTTCG
65 ATCTGCCCCATGATCG
* *
3864823 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTTAGGGCAAAAGATTGGA
1 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGA
3864879 GGTTGTAATT
Statistics
Matches: 203, Mismatches: 12, Indels: 2
0.94 0.06 0.01
Matches are distributed among these distances:
79 2 0.01
80 201 0.99
ACGTcount: A:0.24, C:0.18, G:0.26, T:0.33
Consensus pattern (80 bp):
GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAA
TCTGCCCCATGATCG
Found at i:3864725 original size:40 final size:41
Alignment explanation
Indices: 3864582--3864874 Score: 291
Period size: 41 Copynumber: 7.3 Consensus size: 41
3864572 TAGATTTATC
3864582 AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTT
1 AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTT
* * * * * *
3864623 AGGGTAAAAGATTGGCT-TTCTTTAATC-TGCCC-CATGATC
1 AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTT
*
3864662 GGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTT
1 AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTT
* * * ** *
3864703 AGGGTAAATGATTGGAT-TTCTTCAATC-TGCCC-CATAATC
1 AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTT
*
3864742 GGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTT
1 AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTT
* * * *
3864783 AGGGTAAAAGATTGGAT-TTTTTCAATC-TG-TCTCAT-GTT
1 AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC-TGGTT
* *
3864821 CGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTTTGGTT
1 -AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTT
*
3864863 AGGGCAAAAGAT
1 AGGGTAAAAGAT
3864875 TGGAGGTTGT
Statistics
Matches: 198, Mismatches: 40, Indels: 28
0.74 0.15 0.11
Matches are distributed among these distances:
38 8 0.04
39 61 0.31
40 50 0.25
41 72 0.36
42 7 0.04
ACGTcount: A:0.24, C:0.18, G:0.25, T:0.33
Consensus pattern (41 bp):
AGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTT
Found at i:3864748 original size:223 final size:222
Alignment explanation
Indices: 3864361--3864801 Score: 810
Period size: 223 Copynumber: 2.0 Consensus size: 222
3864351 CCCATGATCG
3864361 GGGTAAAAGATCGGATGGTCTTCAATCTTCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAAT
1 GGGTAAAAGATCGGATGGTCTTCAATCTTCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAAT
3864426 CTGCCCCATGATCAGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGAGTAAAAGA
66 CTGCCCCATGATCAGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGAGTAAAAGA
* *
3864491 TTGGATTTCTTCAATCTGCCTCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCT
131 TTGGATTTCTTCAATCTGCCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCT
3864556 GGTTAGGGTAAAAGATTAGATTTATCA
196 GGTTAGGGTAAAAGATTAGATTTATCA
*
3864583 GGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAAAGATTGGCTTTCTTTAA
1 GGGTAAAAGATCGGATGGTCTTCAATCTT-CCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAA
* * *
3864648 TCTGCCCCATGATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGGGTAAATG
65 TCTGCCCCATGATCAGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGAGTAAAAG
3864713 ATTGGATTTCTTCAATCTGCCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC
130 ATTGGATTTCTTCAATCTGCCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTC
*
3864778 TGGTTAGGGTAAAAGATTGGATTT
195 TGGTTAGGGTAAAAGATTAGATTT
3864802 TTTCAATCTG
Statistics
Matches: 211, Mismatches: 7, Indels: 1
0.96 0.03 0.00
Matches are distributed among these distances:
222 29 0.14
223 182 0.86
ACGTcount: A:0.25, C:0.18, G:0.25, T:0.32
Consensus pattern (222 bp):
GGGTAAAAGATCGGATGGTCTTCAATCTTCCCTCTGGTTAGGGTAAAAGATTGGATTTCTTTAAT
CTGCCCCATGATCAGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCTGGTTAGAGTAAAAGA
TTGGATTTCTTCAATCTGCCCCATAATCGGGGTAAAAGATCGGATGGTCTTCAATCTTGCCCTCT
GGTTAGGGTAAAAGATTAGATTTATCA
Found at i:3865018 original size:50 final size:50
Alignment explanation
Indices: 3864964--3865109 Score: 202
Period size: 50 Copynumber: 2.9 Consensus size: 50
3864954 TTTAAATGAC
* * * * * *
3864964 TGAGATTTGCCATTACAGCTTCATTCTACCCCTCTACAGCTTTAGGTGTA
1 TGAGATTTGCCATTGCAGTTTCAATCTGCACCTCCACAGCTTTAGGTGTA
* *
3865014 TGAGATTTGACATTGCGGTTTCAATCTGCACCTCCACAGCTTTAGGTGTA
1 TGAGATTTGCCATTGCAGTTTCAATCTGCACCTCCACAGCTTTAGGTGTA
* *
3865064 TGAGATTTACCATTGCAGTTTCAATCTGCACCTCCACCGCTTTAGG
1 TGAGATTTGCCATTGCAGTTTCAATCTGCACCTCCACAGCTTTAGG
3865110 GGTAAAAGAT
Statistics
Matches: 84, Mismatches: 12, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
50 84 1.00
ACGTcount: A:0.22, C:0.25, G:0.18, T:0.34
Consensus pattern (50 bp):
TGAGATTTGCCATTGCAGTTTCAATCTGCACCTCCACAGCTTTAGGTGTA
Found at i:3866038 original size:6 final size:6
Alignment explanation
Indices: 3866029--3866088 Score: 61
Period size: 6 Copynumber: 10.0 Consensus size: 6
3866019 TCGACCTCCC
* * *
3866029 CTTTTT CTTTTT CTTTTCTT CTTTTT CCTTTT CTTTGT CTTTTT -TTTCT
1 CTTTTT CTTTTT C-TTT-TT CTTTTT CTTTTT CTTTTT CTTTTT CTTTTT
3866078 -TTTTT CTTTTT
1 CTTTTT CTTTTT
3866089 TTAATTTTTT
Statistics
Matches: 45, Mismatches: 6, Indels: 6
0.79 0.11 0.11
Matches are distributed among these distances:
5 8 0.18
6 28 0.62
7 6 0.13
8 3 0.07
ACGTcount: A:0.00, C:0.18, G:0.02, T:0.80
Consensus pattern (6 bp):
CTTTTT
Found at i:3866052 original size:20 final size:20
Alignment explanation
Indices: 3866029--3866087 Score: 82
Period size: 20 Copynumber: 2.9 Consensus size: 20
3866019 TCGACCTCCC
3866029 CTTTTTCTTTTTCTTTTCTT
1 CTTTTTCTTTTTCTTTTCTT
*
3866049 CTTTTTCCTTTTCTTTGTCTT
1 CTTTTTCTTTTTCTTT-TCTT
*
3866070 TTTTTTCTTTTTTCTTTT
1 CTTTTTC-TTTTTCTTTT
3866088 TTTAATTTTT
Statistics
Matches: 34, Mismatches: 3, Indels: 3
0.85 0.08 0.08
Matches are distributed among these distances:
20 15 0.44
21 11 0.32
22 8 0.24
ACGTcount: A:0.00, C:0.19, G:0.02, T:0.80
Consensus pattern (20 bp):
CTTTTTCTTTTTCTTTTCTT
Found at i:3866058 original size:27 final size:28
Alignment explanation
Indices: 3866028--3866088 Score: 81
Period size: 27 Copynumber: 2.2 Consensus size: 28
3866018 CTCGACCTCC
*
3866028 CCTTTTTCTTTTTC-TTTTCTTCTTTTT
1 CCTTTTTCTTTGTCTTTTTCTTCTTTTT
*
3866055 CC-TTTTCTTTGTCTTTTTTTTCTTTTT
1 CCTTTTTCTTTGTCTTTTTCTTCTTTTT
*
3866082 TCTTTTT
1 CCTTTTT
3866089 TTAATTTTTT
Statistics
Matches: 29, Mismatches: 3, Indels: 3
0.83 0.09 0.09
Matches are distributed among these distances:
26 10 0.34
27 15 0.52
28 4 0.14
ACGTcount: A:0.00, C:0.20, G:0.02, T:0.79
Consensus pattern (28 bp):
CCTTTTTCTTTGTCTTTTTCTTCTTTTT
Found at i:3866059 original size:15 final size:14
Alignment explanation
Indices: 3866033--3866063 Score: 53
Period size: 14 Copynumber: 2.1 Consensus size: 14
3866023 CCTCCCCTTT
3866033 TTCTTTTTCTTTTC
1 TTCTTTTTCTTTTC
3866047 TTCTTTTTCCTTTTC
1 TTCTTTTT-CTTTTC
3866062 TT
1 TT
3866064 TGTCTTTTTT
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
14 8 0.50
15 8 0.50
ACGTcount: A:0.00, C:0.23, G:0.00, T:0.77
Consensus pattern (14 bp):
TTCTTTTTCTTTTC
Found at i:3866075 original size:15 final size:16
Alignment explanation
Indices: 3866057--3866109 Score: 54
Period size: 18 Copynumber: 3.2 Consensus size: 16
3866047 TTCTTTTTCC
3866057 TTTTC-TTTGTCTTTT
1 TTTTCTTTTGTCTTTT
*
3866072 TTTTCTTTTTTCTTTT
1 TTTTCTTTTGTCTTTT
* *
3866088 TTTAATTTTTTATCTTTT
1 TTT--TCTTTTGTCTTTT
3866106 TTTT
1 TTTT
3866110 TGAAATTTCT
Statistics
Matches: 32, Mismatches: 3, Indels: 5
0.80 0.08 0.12
Matches are distributed among these distances:
15 5 0.16
16 13 0.41
18 14 0.44
ACGTcount: A:0.06, C:0.09, G:0.02, T:0.83
Consensus pattern (16 bp):
TTTTCTTTTGTCTTTT
Found at i:3866104 original size:34 final size:34
Alignment explanation
Indices: 3866036--3866109 Score: 89
Period size: 34 Copynumber: 2.1 Consensus size: 34
3866026 CCCCTTTTTC
*
3866036 TTTTTCTTTTCTTCTTTTTCCTTTTCTTTGTCTTT
1 TTTTTCTTTTCTTCTTTTT-CTTTTCTTTATCTTT
*
3866071 TTTTTCTTTT-TTCTTTTT-TTAATTTTTTATCTTT
1 TTTTTCTTTTCTTCTTTTTCTT--TTCTTTATCTTT
3866105 TTTTT
1 TTTTT
3866110 TGAAATTTCT
Statistics
Matches: 35, Mismatches: 2, Indels: 5
0.83 0.05 0.12
Matches are distributed among these distances:
32 2 0.06
34 23 0.66
35 10 0.29
ACGTcount: A:0.04, C:0.14, G:0.01, T:0.81
Consensus pattern (34 bp):
TTTTTCTTTTCTTCTTTTTCTTTTCTTTATCTTT
Found at i:3871177 original size:63 final size:62
Alignment explanation
Indices: 3871082--3871247 Score: 232
Period size: 63 Copynumber: 2.7 Consensus size: 62
3871072 TTGGTTTGTT
3871082 ATTTATTTATTTAT-TTAT--AATAATAAATAAATAATAAAACAAAATTAATATTATTTTAC
1 ATTTATTTATTTATATTATAAAATAATAAATAAATAATAAAACAAAATTAATATTATTTTAC
* *
3871141 ATTTATTTATTTATATTCATAAAATAATAAATAAATAATAAAATAAAATTAATATTATTTTAT
1 ATTTATTTATTTATATT-ATAAAATAATAAATAAATAATAAAACAAAATTAATATTATTTTAC
* *
3871204 ATTTATTTATTT-TCATAAAAATAATAATAAATAAATAAATAAAA
1 ATTTATTTATTTAT-ATTATAA-AATAATAAATAAAT-AATAAAA
3871248 AGAATAAGAA
Statistics
Matches: 96, Mismatches: 4, Indels: 9
0.88 0.04 0.08
Matches are distributed among these distances:
59 14 0.15
60 2 0.02
61 2 0.02
62 4 0.04
63 67 0.70
64 7 0.07
ACGTcount: A:0.54, C:0.02, G:0.00, T:0.44
Consensus pattern (62 bp):
ATTTATTTATTTATATTATAAAATAATAAATAAATAATAAAACAAAATTAATATTATTTTAC
Found at i:3873265 original size:30 final size:30
Alignment explanation
Indices: 3873231--3873334 Score: 75
Period size: 30 Copynumber: 3.2 Consensus size: 30
3873221 TTTTTCAGGA
3873231 TGAAAATACCGAAATTTAAAATGAAAATGT
1 TGAAAATACCGAAATTTAAAATGAAAATGT
** * *
3873261 TG-AAATAGCATTAAATTATTAAAAAGGGATACAAATGAA
1 TGAAAATA-C-CGAAA-T-TT-AAAA-TG--A-AAATG-T
3873300 TGAAAATACCGAAATTTAAAATGAAAATGT
1 TGAAAATACCGAAATTTAAAATGAAAATGT
3873330 TGAAA
1 TGAAA
3873335 TAGCATTAAA
Statistics
Matches: 55, Mismatches: 8, Indels: 22
0.65 0.09 0.26
Matches are distributed among these distances:
29 5 0.09
30 8 0.15
31 8 0.15
32 2 0.04
33 2 0.04
34 5 0.09
35 5 0.09
36 2 0.04
37 2 0.04
38 8 0.15
39 3 0.05
40 5 0.09
ACGTcount: A:0.54, C:0.06, G:0.14, T:0.26
Consensus pattern (30 bp):
TGAAAATACCGAAATTTAAAATGAAAATGT
Found at i:3873312 original size:69 final size:69
Alignment explanation
Indices: 3873230--3873367 Score: 276
Period size: 69 Copynumber: 2.0 Consensus size: 69
3873220 TTTTTTCAGG
3873230 ATGAAAATACCGAAATTTAAAATGAAAATGTTGAAATAGCATTAAATTATTAAAAAGGGATACAA
1 ATGAAAATACCGAAATTTAAAATGAAAATGTTGAAATAGCATTAAATTATTAAAAAGGGATACAA
3873295 ATGA
66 ATGA
3873299 ATGAAAATACCGAAATTTAAAATGAAAATGTTGAAATAGCATTAAATTATTAAAAAGGGATACAA
1 ATGAAAATACCGAAATTTAAAATGAAAATGTTGAAATAGCATTAAATTATTAAAAAGGGATACAA
3873364 ATGA
66 ATGA
3873368 CATGGTATCT
Statistics
Matches: 69, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
69 69 1.00
ACGTcount: A:0.54, C:0.06, G:0.14, T:0.26
Consensus pattern (69 bp):
ATGAAAATACCGAAATTTAAAATGAAAATGTTGAAATAGCATTAAATTATTAAAAAGGGATACAA
ATGA
Found at i:3883163 original size:6 final size:6
Alignment explanation
Indices: 3883152--3883188 Score: 74
Period size: 6 Copynumber: 6.2 Consensus size: 6
3883142 TAATAAAAAC
3883152 GAGGGA GAGGGA GAGGGA GAGGGA GAGGGA GAGGGA G
1 GAGGGA GAGGGA GAGGGA GAGGGA GAGGGA GAGGGA G
3883189 GAGAGGTTAG
Statistics
Matches: 31, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 31 1.00
ACGTcount: A:0.32, C:0.00, G:0.68, T:0.00
Consensus pattern (6 bp):
GAGGGA
Found at i:3885647 original size:17 final size:17
Alignment explanation
Indices: 3885625--3885661 Score: 74
Period size: 17 Copynumber: 2.2 Consensus size: 17
3885615 TATTTGTAAA
3885625 TTTCAAAATTTTCTATT
1 TTTCAAAATTTTCTATT
3885642 TTTCAAAATTTTCTATT
1 TTTCAAAATTTTCTATT
3885659 TTT
1 TTT
3885662 TATCAATTAA
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 20 1.00
ACGTcount: A:0.27, C:0.11, G:0.00, T:0.62
Consensus pattern (17 bp):
TTTCAAAATTTTCTATT
Found at i:3888240 original size:15 final size:16
Alignment explanation
Indices: 3888222--3888251 Score: 53
Period size: 16 Copynumber: 1.9 Consensus size: 16
3888212 TTTGTTGTGT
3888222 TTTCA-ACAAATTTTC
1 TTTCACACAAATTTTC
3888237 TTTCACACAAATTTT
1 TTTCACACAAATTTT
3888252 TTTTGCTCTT
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
15 5 0.36
16 9 0.64
ACGTcount: A:0.33, C:0.20, G:0.00, T:0.47
Consensus pattern (16 bp):
TTTCACACAAATTTTC
Found at i:3889984 original size:15 final size:16
Alignment explanation
Indices: 3889966--3890000 Score: 54
Period size: 16 Copynumber: 2.2 Consensus size: 16
3889956 GGGGTTGGAC
3889966 TTGGTTCA-ATTGGGT
1 TTGGTTCACATTGGGT
*
3889981 TTGGTTCACTTTGGGT
1 TTGGTTCACATTGGGT
3889997 TTGG
1 TTGG
3890001 GTTATTGGAT
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
15 8 0.44
16 10 0.56
ACGTcount: A:0.09, C:0.09, G:0.34, T:0.49
Consensus pattern (16 bp):
TTGGTTCACATTGGGT
Found at i:3897865 original size:17 final size:17
Alignment explanation
Indices: 3897827--3897873 Score: 53
Period size: 17 Copynumber: 2.7 Consensus size: 17
3897817 CAAGGATAAA
3897827 AAATTTA-TATAAACCT
1 AAATTTATTATAAACCT
3897843 ATAATTTATTATAAACAC-
1 A-AATTTATTATAAAC-CT
3897861 AAATTTATGTATA
1 AAATTTAT-TATA
3897874 TTCTCTAAAT
Statistics
Matches: 27, Mismatches: 0, Indels: 6
0.82 0.00 0.18
Matches are distributed among these distances:
16 1 0.04
17 13 0.48
18 12 0.44
19 1 0.04
ACGTcount: A:0.49, C:0.09, G:0.02, T:0.40
Consensus pattern (17 bp):
AAATTTATTATAAACCT
Found at i:3899680 original size:23 final size:23
Alignment explanation
Indices: 3899637--3899680 Score: 54
Period size: 23 Copynumber: 1.9 Consensus size: 23
3899627 TTGGCTTAAT
*
3899637 ACATTATTTAATTTTTGAGTTTG
1 ACATTATTTAATTTGTGAGTTTG
*
3899660 ACATTTTTTAATATTGT-AGTT
1 ACATTATTTAAT-TTGTGAGTT
3899681 GTGTTATTTT
Statistics
Matches: 18, Mismatches: 2, Indels: 2
0.82 0.09 0.09
Matches are distributed among these distances:
23 15 0.83
24 3 0.17
ACGTcount: A:0.27, C:0.05, G:0.11, T:0.57
Consensus pattern (23 bp):
ACATTATTTAATTTGTGAGTTTG
Found at i:3900125 original size:26 final size:27
Alignment explanation
Indices: 3900096--3900148 Score: 65
Period size: 26 Copynumber: 2.0 Consensus size: 27
3900086 AAACATTTTT
*
3900096 TATTACTTAATTTTATT-ATA-AATACA
1 TATTAATTAATTTT-TTAATACAATACA
*
3900122 TATTAATTTATTTTTTAATACAATACA
1 TATTAATTAATTTTTTAATACAATACA
3900149 AGACATATGA
Statistics
Matches: 23, Mismatches: 2, Indels: 3
0.82 0.07 0.11
Matches are distributed among these distances:
25 2 0.09
26 15 0.65
27 6 0.26
ACGTcount: A:0.42, C:0.08, G:0.00, T:0.51
Consensus pattern (27 bp):
TATTAATTAATTTTTTAATACAATACA
Found at i:3900267 original size:27 final size:29
Alignment explanation
Indices: 3900235--3900289 Score: 78
Period size: 27 Copynumber: 1.9 Consensus size: 29
3900225 AAATTTTAAA
3900235 ATTTTAAATTA-AAAAAT-ATAAAATTAC
1 ATTTTAAATTACAAAAATAATAAAATTAC
*
3900262 ATTTTAACTTACTAAAAATAATAAAATT
1 ATTTTAAATTAC-AAAAATAATAAAATT
3900290 TCGATTTAAT
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
27 10 0.42
29 6 0.25
30 8 0.33
ACGTcount: A:0.56, C:0.05, G:0.00, T:0.38
Consensus pattern (29 bp):
ATTTTAAATTACAAAAATAATAAAATTAC
Found at i:3900298 original size:30 final size:29
Alignment explanation
Indices: 3900246--3900317 Score: 76
Period size: 30 Copynumber: 2.4 Consensus size: 29
3900236 TTTTAAATTA
3900246 AAAAATATAAAATTACATTTTAACT-TACT
1 AAAAATATAAAATTACATTTTAACTCTA-T
* *
3900275 AAAAATAATAAAATTTCGA-TTTAATTCTAT
1 AAAAAT-ATAAAATTAC-ATTTTAACTCTAT
3900305 AAAAATTATAAAA
1 AAAAA-TATAAAA
3900318 ATATAAATTT
Statistics
Matches: 37, Mismatches: 2, Indels: 7
0.80 0.04 0.15
Matches are distributed among these distances:
29 6 0.16
30 27 0.73
31 4 0.11
ACGTcount: A:0.56, C:0.07, G:0.01, T:0.36
Consensus pattern (29 bp):
AAAAATATAAAATTACATTTTAACTCTAT
Found at i:3903792 original size:6 final size:6
Alignment explanation
Indices: 3903757--3903791 Score: 61
Period size: 6 Copynumber: 5.8 Consensus size: 6
3903747 AAAACGACCC
*
3903757 CCTCAT CCTCAT CCTCAT CCTCAT CCTCAA CCTCA
1 CCTCAT CCTCAT CCTCAT CCTCAT CCTCAT CCTCA
3903792 AGCTCCTCCT
Statistics
Matches: 28, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
6 28 1.00
ACGTcount: A:0.20, C:0.51, G:0.00, T:0.29
Consensus pattern (6 bp):
CCTCAT
Found at i:3904265 original size:2 final size:2
Alignment explanation
Indices: 3904258--3904287 Score: 60
Period size: 2 Copynumber: 15.0 Consensus size: 2
3904248 CTTTCAATTG
3904258 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
3904288 GAATATGAAG
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 28 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:3907835 original size:12 final size:12
Alignment explanation
Indices: 3907818--3907843 Score: 52
Period size: 12 Copynumber: 2.2 Consensus size: 12
3907808 TTTATTTTGC
3907818 ATTTATATATAT
1 ATTTATATATAT
3907830 ATTTATATATAT
1 ATTTATATATAT
3907842 AT
1 AT
3907844 ACTTAAACCA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 14 1.00
ACGTcount: A:0.42, C:0.00, G:0.00, T:0.58
Consensus pattern (12 bp):
ATTTATATATAT
Found at i:3908438 original size:13 final size:13
Alignment explanation
Indices: 3908420--3908485 Score: 64
Period size: 13 Copynumber: 5.1 Consensus size: 13
3908410 AATTTAGCAT
3908420 TGCTTTTGAAAAG
1 TGCTTTTGAAAAG
*
3908433 TGCTTTTAAAAAG
1 TGCTTTTGAAAAG
*
3908446 TG-TGTTGGAAAAG
1 TGCT-TTTGAAAAG
*
3908459 -GAATTTTGAAAAG
1 TG-CTTTTGAAAAG
*
3908472 TACTTTTGAAAAG
1 TGCTTTTGAAAAG
3908485 T
1 T
3908486 TTAGTTTAAG
Statistics
Matches: 43, Mismatches: 6, Indels: 8
0.75 0.11 0.14
Matches are distributed among these distances:
12 2 0.05
13 40 0.93
14 1 0.02
ACGTcount: A:0.36, C:0.05, G:0.23, T:0.36
Consensus pattern (13 bp):
TGCTTTTGAAAAG
Found at i:3909338 original size:9 final size:9
Alignment explanation
Indices: 3909320--3909382 Score: 61
Period size: 9 Copynumber: 7.8 Consensus size: 9
3909310 ATCGATAAAT
3909320 AATT-TTAA
1 AATTATTAA
3909328 AATTATTAA
1 AATTATTAA
3909337 AATTATT--
1 AATTATTAA
3909344 --TT-TTAA
1 AATTATTAA
3909350 AA-TA-TAA
1 AATTATTAA
3909357 AATTATTAA
1 AATTATTAA
3909366 AATTATTTAA
1 AATTA-TTAA
3909376 AATTATT
1 AATTATT
3909383 TTTTAAAATA
Statistics
Matches: 46, Mismatches: 0, Indels: 17
0.73 0.00 0.27
Matches are distributed among these distances:
4 2 0.04
5 2 0.04
7 6 0.13
8 6 0.13
9 21 0.46
10 9 0.20
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (9 bp):
AATTATTAA
Found at i:3909344 original size:20 final size:18
Alignment explanation
Indices: 3909316--3909402 Score: 70
Period size: 20 Copynumber: 4.4 Consensus size: 18
3909306 TCACATCGAT
*
3909316 AAATAATTTTAAAATTATTA
1 AAATTATTTTAAAA-TA-TA
3909336 AAATTATTTTTTAAAATATA
1 AAATTA--TTTTAAAATATA
3909356 AAATTA--TTAAAATTATTTA
1 AAATTATTTTAAAA-TA--TA
3909375 AAATTATTTTTTAAAATATA
1 AAATTA--TTTTAAAATATA
3909395 AAATTATT
1 AAATTATT
3909403 AAAACCATCA
Statistics
Matches: 57, Mismatches: 1, Indels: 20
0.73 0.01 0.26
Matches are distributed among these distances:
16 6 0.11
17 2 0.04
18 2 0.04
19 8 0.14
20 21 0.37
21 2 0.04
22 10 0.18
23 6 0.11
ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48
Consensus pattern (18 bp):
AAATTATTTTAAAATATA
Found at i:3909351 original size:13 final size:13
Alignment explanation
Indices: 3909333--3909391 Score: 52
Period size: 13 Copynumber: 4.5 Consensus size: 13
3909323 TTTAAAATTA
3909333 TTAAAATTATTTT
1 TTAAAATTATTTT
* *
3909346 TTAAAATATAAAATTA
1 TTAAAAT-T--ATTTT
3909362 TTAAAATTA---T
1 TTAAAATTATTTT
3909372 TTAAAATTATTTT
1 TTAAAATTATTTT
3909385 TTAAAAT
1 TTAAAAT
3909392 ATAAAATTAT
Statistics
Matches: 37, Mismatches: 3, Indels: 12
0.71 0.06 0.23
Matches are distributed among these distances:
10 9 0.24
13 16 0.43
14 1 0.03
15 1 0.03
16 10 0.27
ACGTcount: A:0.49, C:0.00, G:0.00, T:0.51
Consensus pattern (13 bp):
TTAAAATTATTTT
Found at i:3909376 original size:39 final size:38
Alignment explanation
Indices: 3909320--3909406 Score: 158
Period size: 39 Copynumber: 2.3 Consensus size: 38
3909310 ATCGATAAAT
3909320 AATT-TTAAAATTATTAAAATTATTTTTTAAAATATAA
1 AATTATTAAAATTATTAAAATTATTTTTTAAAATATAA
3909357 AATTATTAAAATTATTTAAAATTATTTTTTAAAATATAA
1 AATTATTAAAATTA-TTAAAATTATTTTTTAAAATATAA
3909396 AATTATTAAAA
1 AATTATTAAAA
3909407 CCATCATCAT
Statistics
Matches: 48, Mismatches: 0, Indels: 2
0.96 0.00 0.04
Matches are distributed among these distances:
37 4 0.08
38 9 0.19
39 35 0.73
ACGTcount: A:0.53, C:0.00, G:0.00, T:0.47
Consensus pattern (38 bp):
AATTATTAAAATTATTAAAATTATTTTTTAAAATATAA
Found at i:3910088 original size:15 final size:17
Alignment explanation
Indices: 3910056--3910090 Score: 56
Period size: 15 Copynumber: 2.2 Consensus size: 17
3910046 CAATCAAAAG
3910056 CTTCAACTTGACGTTTT
1 CTTCAACTTGACGTTTT
3910073 CTTCAA-TTGA-GTTTT
1 CTTCAACTTGACGTTTT
3910088 CTT
1 CTT
3910091 GTGCTAAAAC
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
15 8 0.44
16 4 0.22
17 6 0.33
ACGTcount: A:0.17, C:0.20, G:0.11, T:0.51
Consensus pattern (17 bp):
CTTCAACTTGACGTTTT
Found at i:3910418 original size:20 final size:22
Alignment explanation
Indices: 3910393--3910434 Score: 70
Period size: 20 Copynumber: 2.0 Consensus size: 22
3910383 CGATGATTTT
3910393 AATAATTTT-AT-ATTTTAAAA
1 AATAATTTTAATAATTTTAAAA
3910413 AATAATTTTAATAATTTTAAAA
1 AATAATTTTAATAATTTTAAAA
3910435 TTATTTGTTG
Statistics
Matches: 20, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
20 9 0.45
21 2 0.10
22 9 0.45
ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48
Consensus pattern (22 bp):
AATAATTTTAATAATTTTAAAA
Found at i:3911929 original size:19 final size:19
Alignment explanation
Indices: 3911905--3911944 Score: 71
Period size: 19 Copynumber: 2.1 Consensus size: 19
3911895 CTGTTAGTTC
3911905 AATTGCTAATTAAACTATT
1 AATTGCTAATTAAACTATT
*
3911924 AATTGCTAATTAAACTGTT
1 AATTGCTAATTAAACTATT
3911943 AA
1 AA
3911945 ATCTATTTTA
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
19 20 1.00
ACGTcount: A:0.42, C:0.10, G:0.07, T:0.40
Consensus pattern (19 bp):
AATTGCTAATTAAACTATT
Found at i:3920486 original size:47 final size:47
Alignment explanation
Indices: 3920417--3920509 Score: 186
Period size: 47 Copynumber: 2.0 Consensus size: 47
3920407 GTATCCAACA
3920417 CTTGTACTGGAGTCCAAGTATCATAGTTAGGGAAAAGTACAGATGTC
1 CTTGTACTGGAGTCCAAGTATCATAGTTAGGGAAAAGTACAGATGTC
3920464 CTTGTACTGGAGTCCAAGTATCATAGTTAGGGAAAAGTACAGATGT
1 CTTGTACTGGAGTCCAAGTATCATAGTTAGGGAAAAGTACAGATGT
3920510 ATTTTCATTT
Statistics
Matches: 46, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
47 46 1.00
ACGTcount: A:0.32, C:0.14, G:0.26, T:0.28
Consensus pattern (47 bp):
CTTGTACTGGAGTCCAAGTATCATAGTTAGGGAAAAGTACAGATGTC
Found at i:3922378 original size:15 final size:16
Alignment explanation
Indices: 3922349--3922386 Score: 51
Period size: 15 Copynumber: 2.4 Consensus size: 16
3922339 ACTAAATATG
*
3922349 AAAAATATATTATATTT
1 AAAAATATA-TATATTC
3922366 AAAAATATA-ATATTC
1 AAAAATATATATATTC
3922381 AAAAAT
1 AAAAAT
3922387 CTAAATGAAT
Statistics
Matches: 20, Mismatches: 1, Indels: 2
0.87 0.04 0.09
Matches are distributed among these distances:
15 11 0.55
17 9 0.45
ACGTcount: A:0.61, C:0.03, G:0.00, T:0.37
Consensus pattern (16 bp):
AAAAATATATATATTC
Found at i:3937798 original size:30 final size:30
Alignment explanation
Indices: 3937764--3937843 Score: 83
Period size: 30 Copynumber: 2.6 Consensus size: 30
3937754 TTAATATTTG
3937764 ATTAAGATTAATAAAATATACA-TTAAATA
1 ATTAAGATTAATAAAATATACATTTAAATA
* * *
3937793 TATTAA-AGTTAATTAATTATATATTTAAATA
1 -ATTAAGA-TTAATAAAATATACATTTAAATA
*
3937824 ATTATGATTCAATAAAATAT
1 ATTAAGATT-AATAAAATAT
3937844 GTATATGAGA
Statistics
Matches: 40, Mismatches: 6, Indels: 7
0.75 0.11 0.13
Matches are distributed among these distances:
29 1 0.03
30 23 0.57
31 16 0.40
ACGTcount: A:0.53, C:0.03, G:0.04, T:0.41
Consensus pattern (30 bp):
ATTAAGATTAATAAAATATACATTTAAATA
Found at i:3938922 original size:21 final size:22
Alignment explanation
Indices: 3938863--3938922 Score: 54
Period size: 21 Copynumber: 2.7 Consensus size: 22
3938853 TAAATCATAG
*
3938863 AAATTTTTAATATTT-AATATTTT
1 AAATTTTT--TATTTAATTATTTT
*
3938886 AAATTTTTT-TAATAATTATTTT
1 AAATTTTTTAT-TTAATTATTTT
3938908 -AATTTTTTATTTAAT
1 AAATTTTTTATTTAAT
3938923 ATAAAATTTT
Statistics
Matches: 31, Mismatches: 3, Indels: 8
0.74 0.07 0.19
Matches are distributed among these distances:
20 1 0.03
21 14 0.45
22 8 0.26
23 8 0.26
ACGTcount: A:0.37, C:0.00, G:0.00, T:0.63
Consensus pattern (22 bp):
AAATTTTTTATTTAATTATTTT
Found at i:3940772 original size:2 final size:2
Alignment explanation
Indices: 3940765--3940811 Score: 94
Period size: 2 Copynumber: 23.5 Consensus size: 2
3940755 TATTATTAAC
3940765 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
3940807 TA TA T
1 TA TA T
3940812 GAAATAAAAG
Statistics
Matches: 45, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 45 1.00
ACGTcount: A:0.49, C:0.00, G:0.00, T:0.51
Consensus pattern (2 bp):
TA
Found at i:3942246 original size:2 final size:2
Alignment explanation
Indices: 3942239--3942270 Score: 64
Period size: 2 Copynumber: 16.0 Consensus size: 2
3942229 GGTTACAAAG
3942239 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
3942271 TATTTTGATA
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 30 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:3950795 original size:24 final size:25
Alignment explanation
Indices: 3950744--3950814 Score: 63
Period size: 24 Copynumber: 2.9 Consensus size: 25
3950734 CTAAACACCA
* * *
3950744 TTAAAAATAATAAAATGTACAAATT
1 TTAAAAATAATAAAATATAAAAAAT
*
3950769 TTAAAAAT-ATAATATATAAAAAAT
1 TTAAAAATAATAAAATATAAAAAAT
* ** *
3950793 TTAATAATTGTAAAAAATAAAA
1 TTAAAAATAATAAAATATAAAA
3950815 TTTTCACTTT
Statistics
Matches: 37, Mismatches: 8, Indels: 2
0.79 0.17 0.04
Matches are distributed among these distances:
24 19 0.51
25 18 0.49
ACGTcount: A:0.63, C:0.01, G:0.03, T:0.32
Consensus pattern (25 bp):
TTAAAAATAATAAAATATAAAAAAT
Found at i:3962601 original size:38 final size:38
Alignment explanation
Indices: 3962553--3962626 Score: 112
Period size: 38 Copynumber: 1.9 Consensus size: 38
3962543 TATTTGAATC
**
3962553 GAATCGAAAATTAATTTGATATATCATTATAAACTTAA
1 GAATCGAAAATTAATTCAATATATCATTATAAACTTAA
* *
3962591 GAATTGAAAATTAATTCAATATATCATTATGAACTT
1 GAATCGAAAATTAATTCAATATATCATTATAAACTT
3962627 TTAAGTAAAT
Statistics
Matches: 32, Mismatches: 4, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
38 32 1.00
ACGTcount: A:0.46, C:0.08, G:0.08, T:0.38
Consensus pattern (38 bp):
GAATCGAAAATTAATTCAATATATCATTATAAACTTAA
Found at i:3963080 original size:52 final size:53
Alignment explanation
Indices: 3962968--3963086 Score: 138
Period size: 52 Copynumber: 2.3 Consensus size: 53
3962958 CGAAAATACT
* * *
3962968 AGATTAAAAAATTTGGTGTTGGCCATGTATTGACCGACACCAGTATTTTTTATC
1 AGATAAAAAAATTTGGTGTTGGCCATGCATTGACCGACACCAG-ACTTTTTATC
* *
3963022 A-A-AAAAAAATTTGGTGTTGGTCATGCATT-AGCCGACACCA-CCTTTTTATC
1 AGATAAAAAAATTTGGTGTTGGCCATGCATTGA-CCGACACCAGACTTTTTATC
3963072 AGATAAAAAATATTT
1 AGATAAAAAA-ATTT
3963087 TTTTTGTATT
Statistics
Matches: 56, Mismatches: 5, Indels: 9
0.80 0.07 0.13
Matches are distributed among these distances:
50 9 0.16
51 2 0.04
52 39 0.70
53 5 0.09
54 1 0.02
ACGTcount: A:0.34, C:0.15, G:0.16, T:0.34
Consensus pattern (53 bp):
AGATAAAAAAATTTGGTGTTGGCCATGCATTGACCGACACCAGACTTTTTATC
Found at i:3963213 original size:61 final size:61
Alignment explanation
Indices: 3963055--3963281 Score: 247
Period size: 62 Copynumber: 3.8 Consensus size: 61
3963045 TGCATTAGCC
* * * *
3963055 GACACCACC-TTTTTATCAGATAAAAAA-T---ATTTTTTTTGTATTGGCCATTACTTGG-T
1 GACACCACCTTTTTTATCTGATAAAAAATTCAAATTTTTTTGGTGTT-GCCAATACTTGGCT
* *
3963111 CGATACCACCTTTTTTATCTGACAAAAAATTCAAATTTTTTTGGTGTTAGCCAATACTTGGCT
1 -GACACCACCTTTTTTATCTGATAAAAAATTCAAATTTTTTTGGTGTT-GCCAATACTTGGCT
* * * *
3963174 GACACCACATTTTTTATCTGATAAAAAATTCAAAATTTTTT-GTGTTGACC-ATGCATTGGCC
1 GACACCACCTTTTTTATCTGATAAAAAATTCAAATTTTTTTGGTGTTG-CCAATAC-TTGGCT
*
3963235 GACACCACCTTTTTTATCTGATAAAAAAAT-AAATTTTTTTGGTGTTG
1 GACACCACCTTTTTTATCTGATAAAAAATTCAAATTTTTTTGGTGTTG
3963282 GTCATGCATT
Statistics
Matches: 145, Mismatches: 16, Indels: 14
0.83 0.09 0.08
Matches are distributed among these distances:
57 8 0.06
58 16 0.11
59 1 0.01
60 13 0.09
61 46 0.32
62 60 0.41
63 1 0.01
ACGTcount: A:0.30, C:0.17, G:0.13, T:0.41
Consensus pattern (61 bp):
GACACCACCTTTTTTATCTGATAAAAAATTCAAATTTTTTTGGTGTTGCCAATACTTGGCT
Found at i:3963288 original size:61 final size:61
Alignment explanation
Indices: 3963031--3963299 Score: 282
Period size: 61 Copynumber: 4.5 Consensus size: 61
3963021 CAAAAAAAAA
* * *
3963031 TTTGGTGTTGGTCATGCATTAGCCGACACCACC-TTTTTATCAGAT-AAAAAAT--ATTTT
1 TTTGGTGTTGGCCATGCATTGGCCGACACCACCTTTTTTATCTGATAAAAAAATAAATTTT
* * * * * * *
3963088 TTTTGTATTGGCCAT-TACTTGGTCGATACCACCTTTTTTATCTGACAAAAAATTCAAATTTT
1 TTTGGTGTTGGCCATGCA-TTGGCCGACACCACCTTTTTTATCTGATAAAAAAAT-AAATTTT
* * * * * *
3963150 TTTGGTGTTAGCCAATAC-TTGGCTGACACCACATTTTTTATCTGATAAAAAATTCAAAATTT
1 TTTGGTGTTGGCC-ATGCATTGGCCGACACCACCTTTTTTATCTGATAAAAAAAT-AAATTTT
*
3963212 TTT-GTGTTGACCATGCATTGGCCGACACCACCTTTTTTATCTGATAAAAAAATAAATTTT
1 TTTGGTGTTGGCCATGCATTGGCCGACACCACCTTTTTTATCTGATAAAAAAATAAATTTT
* *
3963272 TTTGGTGTTGGTCATGCATTGACCGACA
1 TTTGGTGTTGGCCATGCATTGGCCGACA
3963300 TCAATATTTT
Statistics
Matches: 172, Mismatches: 30, Indels: 16
0.79 0.14 0.07
Matches are distributed among these distances:
56 1 0.01
57 24 0.14
58 10 0.06
59 6 0.03
60 12 0.07
61 61 0.35
62 56 0.33
63 2 0.01
ACGTcount: A:0.28, C:0.17, G:0.15, T:0.39
Consensus pattern (61 bp):
TTTGGTGTTGGCCATGCATTGGCCGACACCACCTTTTTTATCTGATAAAAAAATAAATTTT
Found at i:3964270 original size:29 final size:30
Alignment explanation
Indices: 3964201--3964321 Score: 172
Period size: 30 Copynumber: 4.1 Consensus size: 30
3964191 AAAAAATAAT
*
3964201 AATTAGAAATGAAATTTAAAATATAAACGA
1 AATTAGAAATTAAATTTAAAATATAAACGA
* * *
3964231 GATTAGAAATTAAAATTAAAATATACAC-A
1 AATTAGAAATTAAATTTAAAATATAAACGA
3964260 AATTAGAAATTAAATTTAAAATATAAACGA
1 AATTAGAAATTAAATTTAAAATATAAACGA
* * *
3964290 AATTACAAATTAAATTTAAAAAATAAAAGA
1 AATTAGAAATTAAATTTAAAATATAAACGA
3964320 AA
1 AA
3964322 AAATCAAAAT
Statistics
Matches: 80, Mismatches: 10, Indels: 2
0.87 0.11 0.02
Matches are distributed among these distances:
29 26 0.32
30 54 0.68
ACGTcount: A:0.62, C:0.04, G:0.07, T:0.27
Consensus pattern (30 bp):
AATTAGAAATTAAATTTAAAATATAAACGA
Found at i:3967780 original size:41 final size:40
Alignment explanation
Indices: 3967732--3967832 Score: 100
Period size: 38 Copynumber: 2.6 Consensus size: 40
3967722 TCGACCTCGA
** *
3967732 GTCGATGAGACACTGGGTGTCATTATTTTACTTCGGATAG
1 GTCGATGAGACACTGGGTGTCACCACTTTACTTCGGATAG
* ** *
3967772 ATTCGATGAGGTACT-GG-GT-ACCACTTTACTTCGGCTAG
1 -GTCGATGAGACACTGGGTGTCACCACTTTACTTCGGATAG
*
3967810 GCCGATGAGACACTGGGTGTCAC
1 GTCGATGAGACACTGGGTGTCAC
3967833 TTTATTGCTT
Statistics
Matches: 46, Mismatches: 11, Indels: 7
0.72 0.17 0.11
Matches are distributed among these distances:
37 10 0.22
38 17 0.37
39 4 0.09
40 4 0.09
41 11 0.24
ACGTcount: A:0.22, C:0.20, G:0.29, T:0.30
Consensus pattern (40 bp):
GTCGATGAGACACTGGGTGTCACCACTTTACTTCGGATAG
Found at i:3969008 original size:22 final size:22
Alignment explanation
Indices: 3968983--3969041 Score: 100
Period size: 22 Copynumber: 2.7 Consensus size: 22
3968973 TTTGGGTGGT
3968983 GGTGAGCTGGAATTTCGGTTTA
1 GGTGAGCTGGAATTTCGGTTTA
* *
3969005 GGTGAGCTGAAATTTCTGTTTA
1 GGTGAGCTGGAATTTCGGTTTA
3969027 GGTGAGCTGGAATTT
1 GGTGAGCTGGAATTT
3969042 GGATGGTCCA
Statistics
Matches: 34, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
22 34 1.00
ACGTcount: A:0.20, C:0.08, G:0.34, T:0.37
Consensus pattern (22 bp):
GGTGAGCTGGAATTTCGGTTTA
Found at i:3969250 original size:93 final size:93
Alignment explanation
Indices: 3969134--3969547 Score: 715
Period size: 93 Copynumber: 4.5 Consensus size: 93
3969124 TAATTTTAAA
3969134 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGAT
1 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGAT
*
3969199 AAATAATGTATTGTCAAATCAACACATT
66 AAATAATGTATTATCAAATCAACACATT
*
3969227 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTT-AATAAATTTAAAATTTAAATTTGGT
1 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGAT
*
3969291 AAATAATTTATTATCAAATCAACACATT
66 AAATAATGTATTATCAAATCAACACATT
*
3969319 ATTTGATAAAAATTAAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTT-AG
1 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGA-
*
3969383 TAAATAATGTATTGTCAAATCAACACATT
65 TAAATAATGTATTATCAAATCAACACATT
* * *
3969412 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATATACAATTTTAATTTGAT
1 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGAT
*
3969477 AAATAATGTATTACCAAATCAACACATT
66 AAATAATGTATTATCAAATCAACACATT
3969505 ATTTGATAAAAAATTGAAATATAATAATAATTTTTTATTTAAA
1 ATTTGAT-AAAAATTGAAATATAATAATAATTTTTTATTTAAA
3969548 CAATGTTAAA
Statistics
Matches: 304, Mismatches: 13, Indels: 7
0.94 0.04 0.02
Matches are distributed among these distances:
92 88 0.29
93 180 0.59
94 36 0.12
ACGTcount: A:0.49, C:0.04, G:0.05, T:0.42
Consensus pattern (93 bp):
ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGAT
AAATAATGTATTATCAAATCAACACATT
Found at i:3969446 original size:185 final size:186
Alignment explanation
Indices: 3969134--3969547 Score: 733
Period size: 185 Copynumber: 2.2 Consensus size: 186
3969124 TAATTTTAAA
3969134 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGAT
1 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGAT
3969199 AAATAATGTATTGTCAAATCAACACATTATTTGATAAAAATTGAAATATAATAATAATTTTTTAT
66 AAATAATGTATTGTCAAATCAACACATTATTTGATAAAAATTGAAATATAATAATAATTTTTTAT
* * * *
3969264 TT-AATAAATTTAAAATTTAAATTTGGTAAATAATTTATTATCAAATCAACACATT
131 TTAAATAAATATAAAATTTAAATTTGATAAATAATGTATTACCAAATCAACACATT
*
3969319 ATTTGATAAAAATTAAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTT-AG
1 ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGA-
3969383 TAAATAATGTATTGTCAAATCAACACATTATTTGATAAAAATTGAAATATAATAATAATTTTTTA
65 TAAATAATGTATTGTCAAATCAACACATTATTTGATAAAAATTGAAATATAATAATAATTTTTTA
* *
3969448 TTTAAATAAATATACAATTTTAATTTGATAAATAATGTATTACCAAATCAACACATT
130 TTTAAATAAATATAAAATTTAAATTTGATAAATAATGTATTACCAAATCAACACATT
3969505 ATTTGATAAAAAATTGAAATATAATAATAATTTTTTATTTAAA
1 ATTTGAT-AAAAATTGAAATATAATAATAATTTTTTATTTAAA
3969548 CAATGTTAAA
Statistics
Matches: 218, Mismatches: 8, Indels: 4
0.95 0.03 0.02
Matches are distributed among these distances:
184 1 0.00
185 129 0.59
186 54 0.25
187 34 0.16
ACGTcount: A:0.49, C:0.04, G:0.05, T:0.42
Consensus pattern (186 bp):
ATTTGATAAAAATTGAAATATAATAATAATTTTTTATTTAAATAAATTTAAAATTTAAATTTGAT
AAATAATGTATTGTCAAATCAACACATTATTTGATAAAAATTGAAATATAATAATAATTTTTTAT
TTAAATAAATATAAAATTTAAATTTGATAAATAATGTATTACCAAATCAACACATT
Found at i:3969633 original size:34 final size:35
Alignment explanation
Indices: 3969595--3969664 Score: 88
Period size: 34 Copynumber: 2.0 Consensus size: 35
3969585 AAAGTAGAAT
*
3969595 TTTAAATTCAAACTTGTA-TAATTATGAAATTAAA
1 TTTAAATTCAAACATGTACTAATTATGAAATTAAA
* *
3969629 TTTAAATTTAAACATGTACCTTAATTTTGAAATTAA
1 TTTAAATTCAAACATGTA-C-TAATTATGAAATTAA
3969665 TTTCAACTTA
Statistics
Matches: 30, Mismatches: 3, Indels: 3
0.83 0.08 0.08
Matches are distributed among these distances:
34 16 0.53
37 14 0.47
ACGTcount: A:0.44, C:0.07, G:0.06, T:0.43
Consensus pattern (35 bp):
TTTAAATTCAAACATGTACTAATTATGAAATTAAA
Found at i:3969694 original size:17 final size:16
Alignment explanation
Indices: 3969661--3969695 Score: 52
Period size: 17 Copynumber: 2.1 Consensus size: 16
3969651 AATTTTGAAA
*
3969661 TTAATTTCAACTTAAT
1 TTAATTTCAAATTAAT
3969677 TTAATTTGCAAATTAAT
1 TTAATTT-CAAATTAAT
3969694 TT
1 TT
3969696 TTACAAAAAT
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
16 7 0.41
17 10 0.59
ACGTcount: A:0.37, C:0.09, G:0.03, T:0.51
Consensus pattern (16 bp):
TTAATTTCAAATTAAT
Found at i:3973662 original size:61 final size:59
Alignment explanation
Indices: 3973569--3974173 Score: 458
Period size: 62 Copynumber: 10.1 Consensus size: 59
3973559 GAAAAAAACT
* *
3973569 TGGTGTCAGCCAATGCAT-AGCCAATGCAAAAAAAATTTAATTTTTTTATCAGATAAAAAAG
1 TGGTGTCGGCCAATGCATGA-CCAA-CCAAAAAAAATTTAA-TTTTTTATCAGATAAAAAAG
*
3973630 TGGTGTCGGCCAA-GCATTGACCAACGCCAAAAAAA--T-A-TTTTTAT-ATGATAAAAAAATG
1 TGGTGTCGGCCAATGCA-TGACCAAC-CAAAAAAAATTTAATTTTTTATCA-GAT-AAAAAA-G
* * * *
3973688 TTGGTGTCGGTCAATTCATGGCCAACACAAAAAAAA-TT-ATTTTTTATCAGA-AAAAAAA
1 -TGGTGTCGGCCAATGCATGACCAAC-CAAAAAAAATTTAATTTTTTATCAGATAAAAAAG
* * ** * *
3973746 TAGTGTCGGCGAATGCATGGTCAACACAAAAAAAATTGAATTTTTTGTCAGATAAAAAAG
1 TGGTGTCGGCCAATGCATGACCAAC-CAAAAAAAATTTAATTTTTTATCAGATAAAAAAG
* * * * *
3973806 ATGGTGTCGGCGAATGTATGGCTAA-CACAAAAAAATTTAAATTTTTATCAGATAAAAAAAAG
1 -TGGTGTCGGCCAATGCATGACCAACCA-AAAAAAATTTAATTTTTTATCAGAT--AAAAAAG
* * * * * * *
3973868 TGATATCGGTCAA-GCAATGACCAACATAAAAAAAATTAAATTTTTTGTCAAATAAAAAAGG
1 TGGTGTCGGCCAATGC-ATGACCAAC-CAAAAAAAATTTAATTTTTTATCAGATAAAAAA-G
* * *
3973929 TGGTGTTGGCCAA-GCAATGGCCAACACAAAAAAAATTTGAATTTTTTGTCAGATAAAAAATG
1 TGGTGTCGGCCAATGC-ATGACCAAC-CAAAAAAAATTT-AATTTTTTATCAGATAAAAAA-G
* * *
3973991 TGATGTCGACTAA-GCAATGACCAACACAAAAAAAATTTAAATTTTTTATCAGATAAAAAAG
1 TGGTGTCGGCCAATGC-ATGACCAAC-CAAAAAAAATTT-AATTTTTTATCAGATAAAAAAG
* *
3974052 ATGGTGTCGGCCAATGCATGACCGA-CACAAAAAAA-TTATTTTTTTATCAGATAAAAAAG
1 -TGGTGTCGGCCAATGCATGACCAACCA-AAAAAAATTTAATTTTTTATCAGATAAAAAAG
* * * * * * * *
3974111 TGGTGTCGACTAATGTATGGCTAA-C-AAAAAAA--TCATCTTTTATCAGATAAAAAAA
1 TGGTGTCGGCCAATGCATGACCAACCAAAAAAAATTTAATTTTTTATCAGATAAAAAAG
3974166 TGGTGTCG
1 TGGTGTCG
3974174 ACCAGTGAAT
Statistics
Matches: 451, Mismatches: 67, Indels: 58
0.78 0.12 0.10
Matches are distributed among these distances:
55 28 0.06
56 17 0.04
57 36 0.08
58 22 0.05
59 69 0.15
60 46 0.10
61 109 0.24
62 121 0.27
63 3 0.01
ACGTcount: A:0.43, C:0.13, G:0.16, T:0.28
Consensus pattern (59 bp):
TGGTGTCGGCCAATGCATGACCAACCAAAAAAAATTTAATTTTTTATCAGATAAAAAAG
Found at i:3973913 original size:62 final size:63
Alignment explanation
Indices: 3973560--3974118 Score: 460
Period size: 61 Copynumber: 9.3 Consensus size: 63
3973550 TAGAGAAATG
** * ** *
3973560 AAAAAAACTTGGTGTCAGCCAATGC-AT-AGCCAATGCAAAAAAAATTTAATTTTTTTATCAGAT
1 AAAAAAAAGTGGTGTCGGCCAATGCAATGA-CCAACACAAAAAAAA-TTAAATTTTTTATCAGAT
* * *
3973623 --AAAAAAGTGGTGTCGGCCAA-GCATTGACCAACGCCAAAAAAA-T--A-TTTTTAT-ATGAT
1 AAAAAAAAGTGGTGTCGGCCAATGCAATGACCAACACAAAAAAAATTAAATTTTTTATCA-GAT
* * * *
3973679 AAAAAAATGTTGGTGTCGGTCAATTC-ATGGCCAACACAAAAAAAATT--ATTTTTTATCAG--
1 AAAAAAAAG-TGGTGTCGGCCAATGCAATGACCAACACAAAAAAAATTAAATTTTTTATCAGAT
* * ** * *
3973738 AAAAAAAA-TAGTGTCGGCGAATGC-ATGGTCAACACAAAAAAAATTGAATTTTTTGTCAGAT
1 AAAAAAAAGTGGTGTCGGCCAATGCAATGACCAACACAAAAAAAATTAAATTTTTTATCAGAT
* * * * * *
3973799 AAAAAAGA-TGGTGTCGGCGAATG-TATGGCTAACACAAAAAAATTTAAA-TTTTTATCAGAT
1 AAAAAAAAGTGGTGTCGGCCAATGCAATGACCAACACAAAAAAAATTAAATTTTTTATCAGAT
* * * * * *
3973859 AAAAAAAAGTGATATCGGTCAA-GCAATGACCAACATAAAAAAAATTAAATTTTTTGTCAAAT
1 AAAAAAAAGTGGTGTCGGCCAATGCAATGACCAACACAAAAAAAATTAAATTTTTTATCAGAT
* * * * *
3973921 -AAAAAAGGTGGTGTTGGCCAA-GCAATGGCCAACACAAAAAAAATTTGAATTTTTTGTCAGAT
1 AAAAAAAAGTGGTGTCGGCCAATGCAATGACCAACACAAAAAAAA-TTAAATTTTTTATCAGAT
* * * *
3973983 -AAAAAATGTGATGTCGACTAA-GCAATGACCAACACAAAAAAAATTTAAATTTTTTATCAGAT
1 AAAAAAAAGTGGTGTCGGCCAATGCAATGACCAACACAAAAAAAA-TTAAATTTTTTATCAGAT
* * *
3974045 AAAAAAGA-TGGTGTCGGCCAATGC-ATGACCGACAC-AAAAAAATT-ATTTTTTTATCAGAT
1 AAAAAAAAGTGGTGTCGGCCAATGCAATGACCAACACAAAAAAAATTAAATTTTTTATCAGAT
3974104 --AAAAAAGTGGTGTCG
1 AAAAAAAAGTGGTGTCG
3974119 ACTAATGTAT
Statistics
Matches: 409, Mismatches: 65, Indels: 49
0.78 0.12 0.09
Matches are distributed among these distances:
55 1 0.00
56 10 0.02
57 37 0.09
58 14 0.03
59 60 0.15
60 26 0.06
61 152 0.37
62 102 0.25
63 7 0.02
ACGTcount: A:0.44, C:0.13, G:0.16, T:0.27
Consensus pattern (63 bp):
AAAAAAAAGTGGTGTCGGCCAATGCAATGACCAACACAAAAAAAATTAAATTTTTTATCAGAT
Found at i:3985582 original size:20 final size:19
Alignment explanation
Indices: 3985557--3985604 Score: 53
Period size: 20 Copynumber: 2.5 Consensus size: 19
3985547 TTAATTTCAG
* *
3985557 TTTATATTATTGTGGTTTTA
1 TTTATATT-TCGTGATTTTA
3985577 TTTATAGTTTCGTGATTTTA
1 TTTATA-TTTCGTGATTTTA
3985597 TTT-TATTT
1 TTTATATTT
3985605 ACGATTTTGT
Statistics
Matches: 25, Mismatches: 2, Indels: 4
0.81 0.06 0.13
Matches are distributed among these distances:
18 3 0.12
19 2 0.08
20 18 0.72
21 2 0.08
ACGTcount: A:0.19, C:0.02, G:0.12, T:0.67
Consensus pattern (19 bp):
TTTATATTTCGTGATTTTA
Found at i:3986096 original size:3 final size:3
Alignment explanation
Indices: 3986088--3986130 Score: 86
Period size: 3 Copynumber: 14.3 Consensus size: 3
3986078 ATATAAAACA
3986088 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT T
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT T
3986131 CACGATTCCT
Statistics
Matches: 40, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 40 1.00
ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67
Consensus pattern (3 bp):
TAT
Done.