Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: CP032246.1 Gossypioides kirkii chromosome KI_03
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 42061019
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 2000 characters in sequence are not A, C, G, or T
File 69 of 135
Found at i:20766100 original size:21 final size:20
Alignment explanation
Indices: 20766059--20766107 Score: 71
Period size: 20 Copynumber: 2.4 Consensus size: 20
20766049 TTCGAAAAAA
*
20766059 AGTCAATGGTCAAAGTCAAC
1 AGTCAACGGTCAAAGTCAAC
*
20766079 AGTCAACGGTCAACGATCAAC
1 AGTCAACGGTCAAAG-TCAAC
20766100 AGTCAACG
1 AGTCAACG
20766108 ATCAGTCAAC
Statistics
Matches: 26, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
20 13 0.50
21 13 0.50
ACGTcount: A:0.39, C:0.24, G:0.20, T:0.16
Consensus pattern (20 bp):
AGTCAACGGTCAAAGTCAAC
Found at i:20766108 original size:14 final size:14
Alignment explanation
Indices: 20766068--20766111 Score: 56
Period size: 14 Copynumber: 3.2 Consensus size: 14
20766058 AAGTCAATGG
20766068 TCAA-AGTCAAC-A
1 TCAACAGTCAACGA
*
20766080 GTCAACGGTCAACGA
1 -TCAACAGTCAACGA
20766095 TCAACAGTCAACGA
1 TCAACAGTCAACGA
20766109 TCA
1 TCA
20766112 GTCAACGGTC
Statistics
Matches: 27, Mismatches: 2, Indels: 3
0.84 0.06 0.09
Matches are distributed among these distances:
13 4 0.15
14 22 0.81
15 1 0.04
ACGTcount: A:0.41, C:0.27, G:0.16, T:0.16
Consensus pattern (14 bp):
TCAACAGTCAACGA
Found at i:20766185 original size:15 final size:15
Alignment explanation
Indices: 20766165--20766198 Score: 50
Period size: 15 Copynumber: 2.3 Consensus size: 15
20766155 GGGTTTGGAC
20766165 TTGGTTCAATTAGGT
1 TTGGTTCAATTAGGT
* *
20766180 TTGGTTCACTTTGGT
1 TTGGTTCAATTAGGT
20766195 TTGG
1 TTGG
20766199 GCTTAAAGGT
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
15 17 1.00
ACGTcount: A:0.12, C:0.09, G:0.29, T:0.50
Consensus pattern (15 bp):
TTGGTTCAATTAGGT
Found at i:20768724 original size:110 final size:109
Alignment explanation
Indices: 20768512--20768793 Score: 350
Period size: 110 Copynumber: 2.6 Consensus size: 109
20768502 TAATTATAAA
* * * * * *
20768512 TATCATTGGTTAATCCAACTAGGGTTGGGCTTATTATTTCATTTCGTCAGTTTATCTGACTAGTG
1 TATCGTTGGTTAATCCAACTAGAGATGGGCTCA-CATTTAATTTCGTCAGTTTATCTGACTAGTG
* ** * *
20768577 CTGGGCACACATTTATCGGTTTATTCGATTAGAGCTAGGCACAAT
65 CTAGGCACACATTTATCGACTTATCCGACTAGAGCTAGGCACAAT
20768622 TATCGTTGGTTAATCCAACTAGAGATGGGGCTCACAGTTT-ATTTCGTCAGTTTATCTGACTAGT
1 TATCGTTGGTTAATCCAACTAGAGAT-GGGCTCACA-TTTAATTTCGTCAGTTTATCTGACTAGT
* * *
20768686 GTTAGGCACACATTTATCGACTTATCCGACTAGTGCTAGGCATAAT
64 GCTAGGCACACATTTATCGACTTATCCGACTAGAGCTAGGCACAAT
* * * * * *
20768732 TATCGTTGGTTTATCCAACTAGAGCTAGGCTCACATTTAATATCGTCGGTTTATCCGACTAG
1 TATCGTTGGTTAATCCAACTAGAGATGGGCTCACATTTAATTTCGTCAGTTTATCTGACTAG
20768794 CATTGGGCGC
Statistics
Matches: 150, Mismatches: 19, Indels: 7
0.85 0.11 0.04
Matches are distributed among these distances:
108 3 0.02
109 28 0.19
110 110 0.73
111 9 0.06
ACGTcount: A:0.24, C:0.19, G:0.21, T:0.36
Consensus pattern (109 bp):
TATCGTTGGTTAATCCAACTAGAGATGGGCTCACATTTAATTTCGTCAGTTTATCTGACTAGTGC
TAGGCACACATTTATCGACTTATCCGACTAGAGCTAGGCACAAT
Found at i:20768962 original size:2 final size:2
Alignment explanation
Indices: 20768919--20768950 Score: 64
Period size: 2 Copynumber: 16.0 Consensus size: 2
20768909 AAGGTAGAAT
20768919 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
20768951 CTTATGTATA
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 30 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:20772931 original size:143 final size:143
Alignment explanation
Indices: 20772673--20772940 Score: 464
Period size: 143 Copynumber: 1.9 Consensus size: 143
20772663 GTGCATGTAA
* * *
20772673 TCTTTCCTAAGTCAAGTAAAGTATCTTAAGATTAGTAGGACATTTAGTGCATATAAATACAACCC
1 TCTTTCCTAAATCAAGTAAAGTATCTTAAGATTAGGAAGACATTTAGTGCATATAAATACAACCC
20772738 TTATTTCATGAAAATTCTCTCATCGAATATTCTGTTGTCAAGTCTCTGTTTTAAACCAAACTTTT
66 TTATTTCATGAAAATTCTCTCATCGAATATTCTGTTGTCAAGTCTCTGTTTTAAACCAAACTTTT
20772803 CATGCATGTGACT
131 CATGCATGTGACT
* *
20772816 TCTTTCCTAAATCAAGTAAGGTATCTTAAGATTAGGAAGACATTTAGTGCATATAAATACAACTC
1 TCTTTCCTAAATCAAGTAAAGTATCTTAAGATTAGGAAGACATTTAGTGCATATAAATACAACCC
* * *
20772881 TTATTTCATGAAAATTTTCTCATTGAATATTTTGTTGTCAAGTCTCTGTTTTAAACCAAA
66 TTATTTCATGAAAATTCTCTCATCGAATATTCTGTTGTCAAGTCTCTGTTTTAAACCAAA
20772941 TTCGTAGCAA
Statistics
Matches: 117, Mismatches: 8, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
143 117 1.00
ACGTcount: A:0.33, C:0.16, G:0.12, T:0.38
Consensus pattern (143 bp):
TCTTTCCTAAATCAAGTAAAGTATCTTAAGATTAGGAAGACATTTAGTGCATATAAATACAACCC
TTATTTCATGAAAATTCTCTCATCGAATATTCTGTTGTCAAGTCTCTGTTTTAAACCAAACTTTT
CATGCATGTGACT
Found at i:20780258 original size:20 final size:20
Alignment explanation
Indices: 20780233--20780274 Score: 84
Period size: 20 Copynumber: 2.1 Consensus size: 20
20780223 AATAGTAAGT
20780233 TAATTAATATCCATAATAAA
1 TAATTAATATCCATAATAAA
20780253 TAATTAATATCCATAATAAA
1 TAATTAATATCCATAATAAA
20780273 TA
1 TA
20780275 TGAACTGTCA
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
20 22 1.00
ACGTcount: A:0.55, C:0.10, G:0.00, T:0.36
Consensus pattern (20 bp):
TAATTAATATCCATAATAAA
Found at i:20780809 original size:69 final size:69
Alignment explanation
Indices: 20780717--20780858 Score: 239
Period size: 69 Copynumber: 2.1 Consensus size: 69
20780707 GAAATGTATA
*
20780717 TATAAGCATTTATTTCATAACTGAAATTAACATTATTATTATGTGAATTTATAATATAACTAATA
1 TATAAGCATTTATTTCATAACTGAAATTAACATTATTATTAAGTGAATTTATAATATAACTAATA
20780782 TACT
66 TACT
* * *
20780786 TATACGCATTTGTTTTATAACTGAAATTAACATTATTATTAAGTGAATTTATAATATAACTAATA
1 TATAAGCATTTATTTCATAACTGAAATTAACATTATTATTAAGTGAATTTATAATATAACTAATA
*
20780851 TATT
66 TACT
20780855 TATA
1 TATA
20780859 TCGATTTTTC
Statistics
Matches: 68, Mismatches: 5, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
69 68 1.00
ACGTcount: A:0.42, C:0.08, G:0.06, T:0.44
Consensus pattern (69 bp):
TATAAGCATTTATTTCATAACTGAAATTAACATTATTATTAAGTGAATTTATAATATAACTAATA
TACT
Found at i:20785370 original size:77 final size:77
Alignment explanation
Indices: 20785243--20785393 Score: 275
Period size: 77 Copynumber: 2.0 Consensus size: 77
20785233 AATTCCAACG
*
20785243 TGGAATTAAAGAGTCAAAGATTAATTCTCAAACCTTAACCCTCGTAATGAAAAATTCTTGAATTA
1 TGGAATTAAAGAGTCAAAGATTAATTCTCAAACCTTAACCCCCGTAATGAAAAATTCTTGAATTA
20785308 AATAATCAATGT
66 AATAATCAATGT
* *
20785320 TGGAATTAAAGAGTCAAAGATTAATTCTCAAATCTTAACCCCCGTAATGAAATATTCTTGAATTA
1 TGGAATTAAAGAGTCAAAGATTAATTCTCAAACCTTAACCCCCGTAATGAAAAATTCTTGAATTA
20785385 AATAATCAA
66 AATAATCAA
20785394 CCCTCAAAAT
Statistics
Matches: 71, Mismatches: 3, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
77 71 1.00
ACGTcount: A:0.43, C:0.15, G:0.11, T:0.31
Consensus pattern (77 bp):
TGGAATTAAAGAGTCAAAGATTAATTCTCAAACCTTAACCCCCGTAATGAAAAATTCTTGAATTA
AATAATCAATGT
Found at i:20790269 original size:30 final size:31
Alignment explanation
Indices: 20790235--20790306 Score: 103
Period size: 30 Copynumber: 2.4 Consensus size: 31
20790225 GTTACATTTA
*
20790235 ACAAAACAGTCACTCAACTT-T-GAAAATGTG
1 ACAAAACAGTCACTAAACTTATCGAAAA-GTG
*
20790265 ACAAAACAGTCACTAAAGTTATCGAAAAGTG
1 ACAAAACAGTCACTAAACTTATCGAAAAGTG
20790296 ACAAAACAGTC
1 ACAAAACAGTC
20790307 CTATTGGCTT
Statistics
Matches: 38, Mismatches: 2, Indels: 3
0.88 0.05 0.07
Matches are distributed among these distances:
30 18 0.47
31 15 0.39
32 5 0.13
ACGTcount: A:0.47, C:0.19, G:0.14, T:0.19
Consensus pattern (31 bp):
ACAAAACAGTCACTAAACTTATCGAAAAGTG
Found at i:20791164 original size:30 final size:31
Alignment explanation
Indices: 20791099--20791167 Score: 88
Period size: 30 Copynumber: 2.3 Consensus size: 31
20791089 AGTAGAGGAT
*
20791099 TGTTTTGTCACTTTTCGATAACTTTAGTAAC
1 TGTTTTGTCACTTTTCGATAACTTGAGTAAC
* *
20791130 TGTTTTGTCACCTTTTC-A-AAGTTGAGTGAC
1 TGTTTTGTCA-CTTTTCGATAACTTGAGTAAC
20791160 TGTTTTGT
1 TGTTTTGT
20791168 TAAATGTAAC
Statistics
Matches: 34, Mismatches: 3, Indels: 3
0.85 0.08 0.08
Matches are distributed among these distances:
30 17 0.50
31 11 0.32
32 6 0.18
ACGTcount: A:0.19, C:0.14, G:0.17, T:0.49
Consensus pattern (31 bp):
TGTTTTGTCACTTTTCGATAACTTGAGTAAC
Found at i:20797614 original size:24 final size:24
Alignment explanation
Indices: 20797581--20797644 Score: 92
Period size: 24 Copynumber: 2.7 Consensus size: 24
20797571 AGAAATAATC
*
20797581 TTTCAGTTAAACTTTGTTTATTTA
1 TTTCAATTAAACTTTGTTTATTTA
*
20797605 TTTCAATTAAACTTTGTTTATTTG
1 TTTCAATTAAACTTTGTTTATTTA
* *
20797629 TTTCAATCAAATTTTG
1 TTTCAATTAAACTTTG
20797645 ATTAGTCTAG
Statistics
Matches: 36, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
24 36 1.00
ACGTcount: A:0.27, C:0.09, G:0.08, T:0.56
Consensus pattern (24 bp):
TTTCAATTAAACTTTGTTTATTTA
Found at i:20806648 original size:44 final size:43
Alignment explanation
Indices: 20806580--20806665 Score: 136
Period size: 44 Copynumber: 2.0 Consensus size: 43
20806570 TGAAAATTGT
20806580 AACACTGTTTCCTATTATTAAAAGTATGTGACTGATTGAGAGG
1 AACACTGTTTCCTATTATTAAAAGTATGTGACTGATTGAGAGG
* * *
20806623 AACACTGTTTCCCTATTATTGAAAGTATGTGATTGGTTGAGAG
1 AACACTGTTT-CCTATTATTAAAAGTATGTGACTGATTGAGAG
20806666 CATGTTGAAT
Statistics
Matches: 39, Mismatches: 3, Indels: 1
0.91 0.07 0.02
Matches are distributed among these distances:
43 10 0.26
44 29 0.74
ACGTcount: A:0.30, C:0.12, G:0.22, T:0.36
Consensus pattern (43 bp):
AACACTGTTTCCTATTATTAAAAGTATGTGACTGATTGAGAGG
Found at i:20808228 original size:22 final size:22
Alignment explanation
Indices: 20808098--20808229 Score: 111
Period size: 22 Copynumber: 6.0 Consensus size: 22
20808088 AGACCATACT
* *
20808098 AGAGAGCACCATAGTGCTAAAC
1 AGAGAGCACCAAAGTGCTAAGC
* *** *
20808120 AAAGAGCATTGAAGTGCTAAAC
1 AGAGAGCACCAAAGTGCTAAGC
* * *
20808142 AGAGAGCACCAAAGTCCTGATC
1 AGAGAGCACCAAAGTGCTAAGC
* *
20808164 AGAGAGCACCAAATTTCTAAGC
1 AGAGAGCACCAAAGTGCTAAGC
* * *
20808186 GGAAAGCAGCAAAGTGCTAAGC
1 AGAGAGCACCAAAGTGCTAAGC
* *
20808208 AGAGAGCACCGAAGTACTAAGC
1 AGAGAGCACCAAAGTGCTAAGC
20808230 TCGTATAAGC
Statistics
Matches: 84, Mismatches: 26, Indels: 0
0.76 0.24 0.00
Matches are distributed among these distances:
22 84 1.00
ACGTcount: A:0.41, C:0.21, G:0.24, T:0.14
Consensus pattern (22 bp):
AGAGAGCACCAAAGTGCTAAGC
Found at i:20811404 original size:26 final size:25
Alignment explanation
Indices: 20811375--20811423 Score: 64
Period size: 25 Copynumber: 1.9 Consensus size: 25
20811365 AAATATTAAC
20811375 AATTCAAAT-AAATTGAAAAGTTAAAT
1 AATT-AAATCAAATT-AAAAGTTAAAT
*
20811401 AATTAAATCAAATTAAAATTTAA
1 AATTAAATCAAATTAAAAGTTAA
20811424 GAGAAAATTT
Statistics
Matches: 21, Mismatches: 1, Indels: 3
0.84 0.04 0.12
Matches are distributed among these distances:
25 12 0.57
26 9 0.43
ACGTcount: A:0.59, C:0.04, G:0.04, T:0.33
Consensus pattern (25 bp):
AATTAAATCAAATTAAAAGTTAAAT
Found at i:20817866 original size:20 final size:20
Alignment explanation
Indices: 20817827--20817895 Score: 75
Period size: 20 Copynumber: 3.4 Consensus size: 20
20817817 GTTTGAAACA
*
20817827 ATTTTAAAATCAAGTTAAAATG
1 ATTTT-AAA-CAAGTCAAAATG
20817849 ATTTTAAACAAGTCAAAATG
1 ATTTTAAACAAGTCAAAATG
* * * *
20817869 ATTTCAACCATGTCAAAATC
1 ATTTTAAACAAGTCAAAATG
20817889 ATTTTAA
1 ATTTTAA
20817896 CACTTCAAAT
Statistics
Matches: 41, Mismatches: 6, Indels: 2
0.84 0.12 0.04
Matches are distributed among these distances:
20 33 0.80
21 3 0.07
22 5 0.12
ACGTcount: A:0.46, C:0.12, G:0.07, T:0.35
Consensus pattern (20 bp):
ATTTTAAACAAGTCAAAATG
Found at i:20818464 original size:14 final size:14
Alignment explanation
Indices: 20818427--20818464 Score: 58
Period size: 14 Copynumber: 2.7 Consensus size: 14
20818417 TCAAAGCACT
*
20818427 TTCAAGAAAATATC
1 TTCAAGCAAATATC
20818441 TTCAAGCAAATATC
1 TTCAAGCAAATATC
*
20818455 TTCAATCAAA
1 TTCAAGCAAA
20818465 CAACCCAAGA
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
14 22 1.00
ACGTcount: A:0.47, C:0.18, G:0.05, T:0.29
Consensus pattern (14 bp):
TTCAAGCAAATATC
Found at i:20819851 original size:28 final size:28
Alignment explanation
Indices: 20819820--20819874 Score: 101
Period size: 28 Copynumber: 2.0 Consensus size: 28
20819810 AAGTCTGCCG
*
20819820 AATAACAAATAATGCGATAGAGATCGCT
1 AATAACAAATAATGCGATAAAGATCGCT
20819848 AATAACAAATAATGCGATAAAGATCGC
1 AATAACAAATAATGCGATAAAGATCGC
20819875 AAATCCCCTT
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
28 26 1.00
ACGTcount: A:0.49, C:0.15, G:0.16, T:0.20
Consensus pattern (28 bp):
AATAACAAATAATGCGATAAAGATCGCT
Found at i:20820190 original size:43 final size:43
Alignment explanation
Indices: 20820074--20820234 Score: 166
Period size: 43 Copynumber: 3.8 Consensus size: 43
20820064 CTCTCAATCA
**
20820074 ATCACATATGATCAATATTAGGAAAC-A-GTTCCATTCATTCG
1 ATCACATATTTTCAATATTAGGAAACAATGTTCCATTCATTCG
* **
20820115 ATCACAT-TCTTTTAATATTAGGAAACAATGTTCCATTCATTTA
1 ATCACATAT-TTTCAATATTAGGAAACAATGTTCCATTCATTCG
**** ** *
20820158 ATCACATATTTTCAATATTAGGAATGTGTGTTCCACGCAATCG
1 ATCACATATTTTCAATATTAGGAAACAATGTTCCATTCATTCG
* *
20820201 ATCACATACTATCAATATTAGGAAACAATGTTCC
1 ATCACATATTTTCAATATTAGGAAACAATGTTCC
20820235 TCTCATTTTC
Statistics
Matches: 95, Mismatches: 21, Indels: 6
0.78 0.17 0.05
Matches are distributed among these distances:
40 1 0.01
41 21 0.22
42 1 0.01
43 71 0.75
44 1 0.01
ACGTcount: A:0.35, C:0.19, G:0.11, T:0.35
Consensus pattern (43 bp):
ATCACATATTTTCAATATTAGGAAACAATGTTCCATTCATTCG
Found at i:20826559 original size:21 final size:21
Alignment explanation
Indices: 20826535--20826578 Score: 79
Period size: 21 Copynumber: 2.1 Consensus size: 21
20826525 AGCCAAACTG
20826535 AAGTATCCAATCACCAAATTA
1 AAGTATCCAATCACCAAATTA
*
20826556 AAGTATCCAATCGCCAAATTA
1 AAGTATCCAATCACCAAATTA
20826577 AA
1 AA
20826579 AATATCTTTG
Statistics
Matches: 22, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
21 22 1.00
ACGTcount: A:0.48, C:0.23, G:0.07, T:0.23
Consensus pattern (21 bp):
AAGTATCCAATCACCAAATTA
Found at i:20827539 original size:12 final size:12
Alignment explanation
Indices: 20827522--20827582 Score: 54
Period size: 12 Copynumber: 5.1 Consensus size: 12
20827512 GTATTAAGGG
20827522 AGAGAAAGAAGA
1 AGAGAAAGAAGA
*
20827534 AGAGAAGGAAGA
1 AGAGAAAGAAGA
*
20827546 GGA-AAAGGAAGA
1 AGAGAAA-GAAGA
*
20827558 AG-GAAAAGAAGG
1 AGAG-AAAGAAGA
*
20827570 AGAGAAGGAAGA
1 AGAGAAAGAAGA
20827582 A
1 A
20827583 ATTTTTGTCG
Statistics
Matches: 38, Mismatches: 7, Indels: 8
0.72 0.13 0.15
Matches are distributed among these distances:
11 2 0.05
12 32 0.84
13 4 0.11
ACGTcount: A:0.61, C:0.00, G:0.39, T:0.00
Consensus pattern (12 bp):
AGAGAAAGAAGA
Found at i:20837885 original size:77 final size:78
Alignment explanation
Indices: 20837616--20838252 Score: 367
Period size: 77 Copynumber: 8.3 Consensus size: 78
20837606 TCTTACTCCG
* * * * *
20837616 ATCATGGAGCAGATTAAAG-TATCCAATCTTTTA-CCTCGATCAT-AGGGCAGATTGAAGA-ATC
1 ATCA-GGAGCAGATTGAAGACATCCAATCTTTTACCCT-AATCATGAAGGCAGATTGAAGACAAC
* *
20837677 CAATCTCTTACCTTA
64 CAATCTTTTACCTCA
** * * * * *
20837692 ATCAAAAGGCAGATTGAAGA-ATTCAATCTCTTACCTTAATTA-GAAGGCAAATTGAA-A-AATC
1 ATCAGGA-GCAGATTGAAGACATCCAATCTTTTACCCTAATCATGAAGGCAGATTGAAGACAA-C
* *
20837753 CAATCTCTTACCTTA
64 CAATCTTTTACCTCA
** * * * * *
20837768 ATCAAAAGGCAGATTAAAGA-ATTCAATCTCTTACCTTAATCA-GAAGGCAGATTGAAGACAAAC
1 ATCAGGA-GCAGATTGAAGACATCCAATCTTTTACCCTAATCATGAAGGCAGATTGAAGACAACC
*
20837831 AATCTTTTA-CTCCG
65 AATCTTTTACCT-CA
* * * * *
20837845 ATCATGGAGTAGATTGAAG-CATCCAATCTTTTACCCTAATCATG-GGGTAGATTCAAGA-ATCC
1 ATCA-GGAGCAGATTGAAGACATCCAATCTTTTACCCTAATCATGAAGGCAGATTGAAGACAACC
* *
20837907 AATCTCTTACCTTA
65 AATCTTTTACCTCA
* ** * * * *
20837921 ATCAGAAGGCAGATTGAAGACAGGCAATCTTTTACTCC-GATCATGGA-GCAGGTTGAAG-CATC
1 ATCAGGA-GCAGATTGAAGACATCCAATCTTTTAC-CCTAATCATGAAGGCAGATTGAAGACAAC
* *
20837983 AAATCTTTTACCTCG
64 CAATCTTTTACCTCA
* * * * *
20837998 ATCATGG-GCCAGATTGAAGA-ATCCAATATTTTACCCTAATCA-GAGGGCATATTGAATACATC
1 ATCA-GGAG-CAGATTGAAGACATCCAATCTTTTACCCTAATCATGAAGGCAGATTGAAGACAAC
* *
20838060 CAATCTCTTACCTTA
64 CAATCTTTTACCTCA
* * ** * * * * *
20838075 ATCAGAAGGCAAATTGAAGACAAGCAATCTCTTA-CTTCGATCATGGA-GCAGATTGAAG-CATC
1 ATCAGGA-GCAGATTGAAGACATCCAATCTTTTACCCT-AATCATGAAGGCAGATTGAAGACAAC
*
20838137 TAATCTTTTACC-CTA
64 CAATCTTTTACCTC-A
* * *
20838152 ATCAGAGGGTAGATTGAAGACATCCAATCTTTTACCTTAATCA-GAAGGCAGATTGAAGA-AACC
1 ATCAG-GAGCAGATTGAAGACATCCAATCTTTTACCCTAATCATGAAGGCAGATTGAAGACAACC
*
20838215 AATTTTTTA-CTCCA
65 AATCTTTTACCT-CA
*
20838229 ATCATGGAGTAGATTGAAG-CATCC
1 ATCA-GGAGCAGATTGAAGACATCC
20838253 GGCATTTTAC
Statistics
Matches: 438, Mismatches: 88, Indels: 70
0.73 0.15 0.12
Matches are distributed among these distances:
75 8 0.02
76 167 0.38
77 227 0.52
78 35 0.08
79 1 0.00
ACGTcount: A:0.35, C:0.20, G:0.16, T:0.28
Consensus pattern (78 bp):
ATCAGGAGCAGATTGAAGACATCCAATCTTTTACCCTAATCATGAAGGCAGATTGAAGACAACCA
ATCTTTTACCTCA
Found at i:20837903 original size:115 final size:115
Alignment explanation
Indices: 20837601--20838173 Score: 541
Period size: 115 Copynumber: 5.0 Consensus size: 115
20837591 CAAAAGACAT
* * *
20837601 CAATCTCTTACTCCGATCATGGAGCAGATTAAAGTATCCAATCTTTTACCTCGATCATAGGGCAG
1 CAATCTCTTACTCCGATCATGGAGCAGATTGAAGCATCCAATCTTTTACCTCAATCATAGGGCAG
* **
20837666 ATTGAAGAATCCAATCTCTTACCTTAATCAAAAGGCAGATTGAAGA-ATT
66 ATTGAAGAATCCAATCTCTTACCTTAATCAGAAGGCAGATTGAAGACAAA
** * * * ** * * * *
20837715 CAATCTCTTAC-CTTAATTA-GAAGGCAAATTGAAAAATCCAATCTCTTACCTTAATCAAAAGGC
1 CAATCTCTTACTC-CGATCATGGA-GCAGATTGAAGCATCCAATCTTTTACCTCAATCATAGGGC
* *
20837778 AGATTAAAGAATTCAATCTCTTACCTTAATCAGAAGGCAGATTGAAGACAAA
64 AGATTGAAGAATCCAATCTCTTACCTTAATCAGAAGGCAGATTGAAGACAAA
* * * *
20837830 CAATCTTTTACTCCGATCATGGAGTAGATTGAAGCATCCAATCTTTTACC-CTAATCATGGGGTA
1 CAATCTCTTACTCCGATCATGGAGCAGATTGAAGCATCCAATCTTTTACCTC-AATCATAGGGCA
* **
20837894 GATTCAAGAATCCAATCTCTTACCTTAATCAGAAGGCAGATTGAAGACAGG
65 GATTGAAGAATCCAATCTCTTACCTTAATCAGAAGGCAGATTGAAGACAAA
* * * *
20837945 CAATCTTTTACTCCGATCATGGAGCAGGTTGAAGCATCAAATCTTTTACCTCGATCAT-GGGCCA
1 CAATCTCTTACTCCGATCATGGAGCAGATTGAAGCATCCAATCTTTTACCTCAATCATAGGG-CA
* * * * * * **
20838009 GATTGAAGAATCCAATATTTTACCCTAATCAGAGGGCATATTGAATACATC
65 GATTGAAGAATCCAATCTCTTACCTTAATCAGAAGGCAGATTGAAGACAAA
** * * ** * * *
20838060 CAATCTCTTAC-CTTAATCA-GAAGGCAAATTGAAGACAAGCAATCTCTTACTTCGATCAT-GGA
1 CAATCTCTTACTC-CGATCATGGA-GCAGATTGAAG-CATCCAATCTTTTACCTCAATCATAGG-
* * * * * *
20838122 GCAGATTGAAGCATCTAATCTTTTACCCTAATCAGAGGGTAGATTGAAGACA
62 GCAGATTGAAGAATCCAATCTCTTACCTTAATCAGAAGGCAGATTGAAGACA
20838174 TCCAATCTTT
Statistics
Matches: 379, Mismatches: 68, Indels: 22
0.81 0.14 0.05
Matches are distributed among these distances:
113 3 0.01
114 96 0.25
115 209 0.55
116 70 0.18
117 1 0.00
ACGTcount: A:0.35, C:0.21, G:0.16, T:0.28
Consensus pattern (115 bp):
CAATCTCTTACTCCGATCATGGAGCAGATTGAAGCATCCAATCTTTTACCTCAATCATAGGGCAG
ATTGAAGAATCCAATCTCTTACCTTAATCAGAAGGCAGATTGAAGACAAA
Found at i:20838147 original size:116 final size:115
Alignment explanation
Indices: 20837638--20838286 Score: 467
Period size: 115 Copynumber: 5.6 Consensus size: 115
20837628 ATTAAAGTAT
* * * * * * *
20837638 CCAATCTTTTACCTCGATCATAGG-GCAGATTGAAGAATCCAATCTCTTACCTTAATCAAAAGGC
1 CCAATCTTTTACTTCGATCAT-GGAGCAGATTGAAGCATCCAATATTTTACCCTAATCAGAGGGC
* *
20837702 AGATTGAAGA-ATTCAATCTCTTACCTTAATTAGAAGGCAAATTGAA-AAA
65 AGATTGAAGACATCCAATCTCTTACCTTAATCAGAAGGCAAATTGAAGAAA
* * ** * * * * * * *
20837751 TCCAATCTCTTACCTT-AATCA-AAAGGCAGATTAAAGAATTCAATCTCTTACCTTAATCAGAAG
1 -CCAATCTTTTA-CTTCGATCATGGA-GCAGATTGAAGCATCCAATATTTTACCCTAATCAGAGG
** * ** * * * * *
20837814 GCAGATTGAAGACAAACAATCTTTTA-CTCCGATCATGGA-GTAGATTGAAGCAT
63 GCAGATTGAAGACATCCAATCTCTTACCT-TAATCA-GAAGGCAAATTGAAGAAA
* * * * * * * * * *
20837867 CCAATCTTTTAC-CCTAATCATGGGGTAGATTCAAGAATCCAATCTCTTACCTTAATCAGAAGGC
1 CCAATCTTTTACTTC-GATCATGGAGCAGATTGAAGCATCCAATATTTTACCCTAATCAGAGGGC
** * ** * ** * *
20837931 AGATTGAAGACAGGCAATCTTTTA-CTCCGATCATGGA-GCAGGTTGAAGCAT
65 AGATTGAAGACATCCAATCTCTTACCT-TAATCA-GAAGGCAAATTGAAGAAA
* * *
20837982 CAAATCTTTTACCTCGATCATGG-GCCAGATTGAAGAATCCAATATTTTACCCTAATCAGAGGGC
1 CCAATCTTTTACTTCGATCATGGAG-CAGATTGAAGCATCCAATATTTTACCCTAATCAGAGGGC
* *
20838046 ATATTGAATACATCCAATCTCTTACCTTAATCAGAAGGCAAATTGAAGACAA
65 AGATTGAAGACATCCAATCTCTTACCTTAATCAGAAGGCAAATTGAAGA-AA
* * * * *
20838098 GCAATCTCTTACTTCGATCATGGAGCAGATTGAAGCATCTAATCTTTTACCCTAATCAGAGGGTA
1 CCAATCTTTTACTTCGATCATGGAGCAGATTGAAGCATCCAATATTTTACCCTAATCAGAGGGCA
* *
20838163 GATTGAAGACATCCAATCTTTTACCTTAATCAGAAGGCAGATTGAAGAAA
66 GATTGAAGACATCCAATCTCTTACCTTAATCAGAAGGCAAATTGAAGAAA
* * * * *** *
20838213 CCAATTTTTTACTCCAATCATGGAGTAGATTGAAGCATCCGGCATTTTA-CCTAAATCAAAGGGC
1 CCAATCTTTTACTTCGATCATGGAGCAGATTGAAGCATCCAATATTTTACCCT-AATCAGAGGGC
*
20838277 AGATCGAAGA
65 AGATTGAAGA
20838287 TAGGTGGCGA
Statistics
Matches: 440, Mismatches: 78, Indels: 33
0.80 0.14 0.06
Matches are distributed among these distances:
114 70 0.16
115 263 0.60
116 106 0.24
117 1 0.00
ACGTcount: A:0.35, C:0.20, G:0.16, T:0.28
Consensus pattern (115 bp):
CCAATCTTTTACTTCGATCATGGAGCAGATTGAAGCATCCAATATTTTACCCTAATCAGAGGGCA
GATTGAAGACATCCAATCTCTTACCTTAATCAGAAGGCAAATTGAAGAAA
Found at i:20838232 original size:38 final size:38
Alignment explanation
Indices: 20837624--20838232 Score: 441
Period size: 38 Copynumber: 15.9 Consensus size: 38
20837614 CGATCATGGA
* * * * *
20837624 GCAGATTAAAGTATCCAATCTTTTACCTCGATCATAGG
1 GCAGATTGAAGAATCCAATCTTTTACCTCAATCAGAAG
* * *
20837662 GCAGATTGAAGAATCCAATCTCTTACCTTAATCAAAAG
1 GCAGATTGAAGAATCCAATCTTTTACCTCAATCAGAAG
* * * *
20837700 GCAGATTGAAGAATTCAATCTCTTACCTTAATTAGAAG
1 GCAGATTGAAGAATCCAATCTTTTACCTCAATCAGAAG
* * * * *
20837738 GCAAATTGAAAAATCCAATCTCTTACCTTAATCAAAAG
1 GCAGATTGAAGAATCCAATCTTTTACCTCAATCAGAAG
* * * *
20837776 GCAGATTAAAGAATTCAATCTCTTACCTTAATCAGAAG
1 GCAGATTGAAGAATCCAATCTTTTACCTCAATCAGAAG
** * *
20837814 GCAGATTGAAGACAAACAATCTTTTA-CTCCGATCATGGA-
1 GCAGATTGAAGA-ATCCAATCTTTTACCT-CAATCA-GAAG
* * *
20837853 GTAGATTGAAGCATCCAATCTTTTACC-CTAATCATG-GG
1 GCAGATTGAAGAATCCAATCTTTTACCTC-AATCA-GAAG
* * * *
20837891 GTAGATTCAAGAATCCAATCTCTTACCTTAATCAGAAG
1 GCAGATTGAAGAATCCAATCTTTTACCTCAATCAGAAG
** * *
20837929 GCAGATTGAAGACAGGCAATCTTTTA-CTCCGATCATGGA-
1 GCAGATTGAAGA-ATCCAATCTTTTACCT-CAATCA-GAAG
* * * *
20837968 GCAGGTTGAAGCATCAAATCTTTTACCTCGATCATG--G
1 GCAGATTGAAGAATCCAATCTTTTACCTCAATCA-GAAG
* *
20838005 GCCAGATTGAAGAATCCAATATTTTACC-CTAATCAGAGG
1 G-CAGATTGAAGAATCCAATCTTTTACCTC-AATCAGAAG
* * * *
20838044 GCATATTGAATACATCCAATCTCTTACCTTAATCAGAAG
1 GCAGATTGAAGA-ATCCAATCTTTTACCTCAATCAGAAG
* ** * * * *
20838083 GCAAATTGAAGACAAGCAATCTCTTACTTCGATCATGGA-
1 GCAGATTGAAGA-ATCCAATCTTTTACCTCAATCA-GAAG
* * *
20838122 GCAGATTGAAGCATCTAATCTTTTACC-CTAATCAGAGG
1 GCAGATTGAAGAATCCAATCTTTTACCTC-AATCAGAAG
* *
20838160 GTAGATTGAAGACATCCAATCTTTTACCTTAATCAGAAG
1 GCAGATTGAAGA-ATCCAATCTTTTACCTCAATCAGAAG
* *
20838199 GCAGATTGAAGAAACCAATTTTTTA-CTCCAATCA
1 GCAGATTGAAGAATCCAATCTTTTACCT-CAATCA
20838233 TGGAGTAGAT
Statistics
Matches: 457, Mismatches: 89, Indels: 50
0.77 0.15 0.08
Matches are distributed among these distances:
37 9 0.02
38 297 0.65
39 145 0.32
40 6 0.01
ACGTcount: A:0.35, C:0.20, G:0.16, T:0.29
Consensus pattern (38 bp):
GCAGATTGAAGAATCCAATCTTTTACCTCAATCAGAAG
Found at i:20838513 original size:16 final size:17
Alignment explanation
Indices: 20838492--20838525 Score: 52
Period size: 17 Copynumber: 2.1 Consensus size: 17
20838482 TCCAAATTAC
*
20838492 AACCC-AATACTTAAAA
1 AACCCAAATACATAAAA
20838508 AACCCAAATACATAAAA
1 AACCCAAATACATAAAA
20838525 A
1 A
20838526 CAAACCCAAA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
16 5 0.31
17 11 0.69
ACGTcount: A:0.62, C:0.24, G:0.00, T:0.15
Consensus pattern (17 bp):
AACCCAAATACATAAAA
Found at i:20842659 original size:21 final size:21
Alignment explanation
Indices: 20842644--20842714 Score: 99
Period size: 21 Copynumber: 3.4 Consensus size: 21
20842634 TTTGTTTTGG
20842644 TAGAAGTCACACTTGTACCGA
1 TAGAAGTCACACTTGTACCGA
20842665 TAGAAGTCACACTTGTACCGA
1 TAGAAGTCACACTTGTACCGA
** *
20842686 TAGAAGT-ATCACAAGTATCGA
1 TAGAAGTCA-CACTTGTACCGA
20842707 TAGAAGTC
1 TAGAAGTC
20842715 TGCACTGTTT
Statistics
Matches: 45, Mismatches: 3, Indels: 3
0.88 0.06 0.06
Matches are distributed among these distances:
20 1 0.02
21 44 0.98
ACGTcount: A:0.37, C:0.20, G:0.20, T:0.24
Consensus pattern (21 bp):
TAGAAGTCACACTTGTACCGA
Found at i:20844553 original size:27 final size:25
Alignment explanation
Indices: 20844516--20844576 Score: 70
Period size: 27 Copynumber: 2.4 Consensus size: 25
20844506 GCTTTGAATT
* *
20844516 TTCTTTAAATGTATGTCTCAAAAAAAA
1 TTCTTTGAATGT-TGTAT-AAAAAAAA
20844543 TTCTTTGAATGTTGTATAAAAAAAA
1 TTCTTTGAATGTTGTATAAAAAAAA
*
20844568 -TCTCTGAAT
1 TTCTTTGAAT
20844577 CTTATTCCAA
Statistics
Matches: 31, Mismatches: 3, Indels: 3
0.84 0.08 0.08
Matches are distributed among these distances:
24 8 0.26
25 8 0.26
26 4 0.13
27 11 0.35
ACGTcount: A:0.41, C:0.10, G:0.10, T:0.39
Consensus pattern (25 bp):
TTCTTTGAATGTTGTATAAAAAAAA
Found at i:20845333 original size:45 final size:45
Alignment explanation
Indices: 20845196--20845974 Score: 835
Period size: 45 Copynumber: 17.1 Consensus size: 45
20845186 GGTGTAGTAA
* * * *
20845196 CTTCAATATGCCCCTCTGGATTTAGGGGTATAAGATTGTATGGTGG
1 CTTCAATCTGCCCCTCTAGA-TTAGGGGTAAAAGATTGGATGGTGG
* * * *
20845242 ATTTAATCTGCCCCTCTAGATTTAAGGGTAAAAGATTAGATGGTGG
1 CTTCAATCTGCCCCTCTAGA-TTAGGGGTAAAAGATTGGATGGTGG
* **
20845288 CTTCAATTTGCCCCTCTAGATTAGGAATAAAAGATTGGATGGTGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* * * *
20845333 CTTCAATTTGTCCCTCTAGATTAGGGGTAAAGGACTGGATGGTGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
*
20845378 CTTCAATCTGCCCCTCTGGATTTAGGGGT-AAAGATTGGATGGTGG
1 CTTCAATCTGCCCCTCTAGA-TTAGGGGTAAAAGATTGGATGGTGG
* * * * * *
20845423 CTTTAATCTGCTCCTCTGGATTAAGGGAAAAAGATTAGATGGTGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* * * * *
20845468 CTTAAATCTGCCCCTCTGGGTTTTGGGGTAAAAGATTGGATTTGGTGA
1 CTTCAATCTGCCCCTCT-AGATTAGGGGTAAAAGATTGGA--TGGTGG
* * * * *
20845516 CTTCAATCTGTCCCTTTGGATTAGGGGTAAAAGACTAGATGGTGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* * *
20845561 CTTCAATATGCCCCTCTAGGTTAGGGGTAAAAGATTGGAT-TTAGTG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGT-G-G
* * * * *
20845607 ATCTCAAT-TCGCCCTTTTAGATTAGGGGTAAAAAATTGGGTGGTGG
1 CT-TCAATCT-GCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* * * * *
20845653 CTTCAATATACCCTTCTAGATTAGGGGTAAAAGACTGGGTGGTGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* * * * *
20845698 CTTTAATTTGCCCCTCTGGATTAGGGGTAAAAGACTGGATTTGGTGA
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGA--TGGTGG
* * * ** *
20845745 CTTCAATCTACCTCTTTAGATTAAAGGTAAAAGACTGGATGGTGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* * *
20845790 CTTCAATCTGCCTCTCTAGATTAGGGGTAAAATACTGGATGGTGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* *
20845835 CTGCAATCTGCCCCTCTGGATTAGGGGTAAAAGATTGGATGGTGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* *
20845880 CTTCAATCTGTCCCTCTAGATTAGGGGTAAAAGATTGGATGATGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
* * *
20845925 CTTCAATATGCCCCTCTAGATTAGGGGTAAAAGATCGGATGATGG
1 CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
20845970 CTTCA
1 CTTCA
20845975 CTCCATTCCA
Statistics
Matches: 621, Mismatches: 99, Indels: 27
0.83 0.13 0.04
Matches are distributed among these distances:
44 7 0.01
45 422 0.68
46 86 0.14
47 86 0.14
48 20 0.03
ACGTcount: A:0.25, C:0.16, G:0.27, T:0.31
Consensus pattern (45 bp):
CTTCAATCTGCCCCTCTAGATTAGGGGTAAAAGATTGGATGGTGG
Found at i:20845676 original size:137 final size:135
Alignment explanation
Indices: 20845217--20845974 Score: 771
Period size: 137 Copynumber: 5.6 Consensus size: 135
20845207 CCCTCTGGAT
* * * * * * * *
20845217 TTAGGGGTATAAGATTGTATGGTGGATTTAATCTGCCCCTCTAGATTTAAGGGTAAAAGATTAGA
1 TTAGGGGTAAAAGATTGGATGGTGGCTTCAATCTGCCCTTCTAGA-TTAGGGGTAAAAGACTGGA
* * ** *
20845282 TGGTGGCTTCAATTTGCCCCTCTAGATTAGGAATAAAAGATTGGATGGTGGCTTCAATTTGTCCC
65 TGGTGGCTTCAATCTGCCCCTCTGGATTAGGGGTAAAAGATTGGATGGTGGCTTCAA-TCGTCCC
*
20845347 -TCTAGA
129 TTTTAGA
* * * * *
20845353 TTAGGGGTAAAGGACTGGATGGTGGCTTCAATCTGCCCCTCTGGATTTAGGGGT-AAAGATTGGA
1 TTAGGGGTAAAAGATTGGATGGTGGCTTCAATCTGCCCTTCTAGA-TTAGGGGTAAAAGACTGGA
* * * * * * *
20845417 TGGTGGCTTTAATCTGCTCCTCTGGATTAAGGGAAAAAGATTAGATGGTGGCTTAAATCTGCCCC
65 TGGTGGCTTCAATCTGCCCCTCTGGATTAGGGGTAAAAGATTGGATGGTGGCTTCAATC-GTCCC
* ** *
20845482 TCTGGGT
129 TTTTAGA
* * * *
20845489 TTTGGGGTAAAAGATTGGATTTGGTGACTTCAATCTGTCCCTT-TGGATTAGGGGTAAAAGACTA
1 TTAGGGGTAAAAGATTGGA--TGGTGGCTTCAATCTG-CCCTTCTAGATTAGGGGTAAAAGACTG
* * *
20845553 GATGGTGGCTTCAATATGCCCCTCTAGG-TTAGGGGTAAAAGATTGGAT-TTAGTGATCTCAATT
63 GATGGTGGCTTCAATCTGCCCCTCT-GGATTAGGGGTAAAAGATTGGATGGT-G-GCT-TCAA-T
20845616 CG-CCCTTTTAGA
123 CGTCCCTTTTAGA
* * * * *
20845628 TTAGGGGTAAAAAATTGGGTGGTGGCTTCAATATACCCTTCTAGATTAGGGGTAAAAGACTGGGT
1 TTAGGGGTAAAAGATTGGATGGTGGCTTCAATCTGCCCTTCTAGATTAGGGGTAAAAGACTGGAT
* * * * *
20845693 GGTGGCTTTAATTTGCCCCTCTGGATTAGGGGTAAAAGACTGGATTTGGTGACTTCAATC-TACC
66 GGTGGCTTCAATCTGCCCCTCTGGATTAGGGGTAAAAGATTGGA--TGGTGGCTTCAATCGTCCC
20845757 TCTTTAGA
129 T-TTTAGA
** * *
20845765 TTAAAGGTAAAAGACTGGATGGTGGCTTCAATCTG-CCTCTCTAGATTAGGGGTAAAATACTGGA
1 TTAGGGGTAAAAGATTGGATGGTGGCTTCAATCTGCCCT-TCTAGATTAGGGGTAAAAGACTGGA
*
20845829 TGGTGGCTGCAATCTGCCCCTCTGGATTAGGGGTAAAAGATTGGATGGTGGCTTCAATCTGTCCC
65 TGGTGGCTTCAATCTGCCCCTCTGGATTAGGGGTAAAAGATTGGATGGTGGCTTCAATC-GTCCC
*
20845894 -TCTAGA
129 TTTTAGA
* * *
20845900 TTAGGGGTAAAAGATTGGATGATGGCTTCAATATGCCCCTCTAGATTAGGGGTAAAAGA-TCGGA
1 TTAGGGGTAAAAGATTGGATGGTGGCTTCAATCTGCCCTTCTAGATTAGGGGTAAAAGACT-GGA
*
20845964 TGATGGCTTCA
65 TGGTGGCTTCA
20845975 CTCCATTCCA
Statistics
Matches: 512, Mismatches: 87, Indels: 47
0.79 0.13 0.07
Matches are distributed among these distances:
134 2 0.00
135 139 0.27
136 80 0.16
137 186 0.36
138 66 0.13
139 32 0.06
140 5 0.01
141 2 0.00
ACGTcount: A:0.26, C:0.15, G:0.28, T:0.31
Consensus pattern (135 bp):
TTAGGGGTAAAAGATTGGATGGTGGCTTCAATCTGCCCTTCTAGATTAGGGGTAAAAGACTGGAT
GGTGGCTTCAATCTGCCCCTCTGGATTAGGGGTAAAAGATTGGATGGTGGCTTCAATCGTCCCTT
TTAGA
Found at i:20848107 original size:24 final size:23
Alignment explanation
Indices: 20848073--20848127 Score: 67
Period size: 23 Copynumber: 2.3 Consensus size: 23
20848063 AGGTTAAGAG
20848073 TAAAACTGTCA-ATGCAAATGTAATA
1 TAAAA-TGTCAGA-GCAAAT-TAATA
20848098 TAAAATGTCAGAGCAAATTAATA
1 TAAAATGTCAGAGCAAATTAATA
*
20848121 AAAAATG
1 TAAAATG
20848128 AATTGATGGT
Statistics
Matches: 28, Mismatches: 1, Indels: 4
0.85 0.03 0.12
Matches are distributed among these distances:
23 11 0.39
24 11 0.39
25 6 0.21
ACGTcount: A:0.53, C:0.09, G:0.13, T:0.25
Consensus pattern (23 bp):
TAAAATGTCAGAGCAAATTAATA
Found at i:20850345 original size:18 final size:19
Alignment explanation
Indices: 20850314--20850352 Score: 53
Period size: 18 Copynumber: 2.1 Consensus size: 19
20850304 TAGAACAAAT
*
20850314 AAAATGCAAAGACAA-TAA
1 AAAATACAAAGACAATTAA
*
20850332 AAAATACAATGACAATTAA
1 AAAATACAAAGACAATTAA
20850351 AA
1 AA
20850353 GAAATGCAAG
Statistics
Matches: 18, Mismatches: 2, Indels: 1
0.86 0.10 0.05
Matches are distributed among these distances:
18 13 0.72
19 5 0.28
ACGTcount: A:0.67, C:0.10, G:0.08, T:0.15
Consensus pattern (19 bp):
AAAATACAAAGACAATTAA
Found at i:20857091 original size:10 final size:10
Alignment explanation
Indices: 20857078--20857133 Score: 64
Period size: 10 Copynumber: 5.8 Consensus size: 10
20857068 TATTTTTTTT
20857078 TTATTTATTA
1 TTATTTATTA
20857088 TTATTTATTA
1 TTATTTATTA
*
20857098 TGATTTATTA
1 TTATTTATTA
20857108 TT-TTT-TTA
1 TTATTTATTA
*
20857116 TTTTTTATGTA
1 TTATTTAT-TA
20857127 TT-TTTAT
1 TTATTTAT
20857134 GAAATTTAAT
Statistics
Matches: 41, Mismatches: 2, Indels: 6
0.84 0.04 0.12
Matches are distributed among these distances:
8 5 0.12
9 6 0.15
10 26 0.63
11 4 0.10
ACGTcount: A:0.23, C:0.00, G:0.04, T:0.73
Consensus pattern (10 bp):
TTATTTATTA
Found at i:20857112 original size:35 final size:35
Alignment explanation
Indices: 20857066--20857135 Score: 106
Period size: 35 Copynumber: 2.0 Consensus size: 35
20857056 TGTGAGGATT
*
20857066 TTTATTTTTTTTTTATTTATTAT-TATTTATTATGA
1 TTTATTATTTTTTTATTTATTATGTATTT-TTATGA
*
20857101 TTTATTATTTTTTTATTTTTTATGTATTTTTATGA
1 TTTATTATTTTTTTATTTATTATGTATTTTTATGA
20857136 AATTTAATGC
Statistics
Matches: 32, Mismatches: 2, Indels: 2
0.89 0.06 0.06
Matches are distributed among these distances:
35 27 0.84
36 5 0.16
ACGTcount: A:0.21, C:0.00, G:0.04, T:0.74
Consensus pattern (35 bp):
TTTATTATTTTTTTATTTATTATGTATTTTTATGA
Found at i:20857132 original size:17 final size:16
Alignment explanation
Indices: 20857075--20857133 Score: 57
Period size: 17 Copynumber: 3.4 Consensus size: 16
20857065 TTTTATTTTT
*
20857075 TTTTTATTTATTATTA
1 TTTTTATTTTTTATTA
20857091 TTTATTATGATTTATTATT-
1 TTT-TTAT--TTT-TTATTA
20857110 TTTTTATTTTTTATGTA
1 TTTTTATTTTTTAT-TA
20857127 TTTTTAT
1 TTTTTAT
20857134 GAAATTTAAT
Statistics
Matches: 36, Mismatches: 1, Indels: 11
0.75 0.02 0.23
Matches are distributed among these distances:
15 4 0.11
16 7 0.19
17 11 0.31
18 4 0.11
19 5 0.14
20 5 0.14
ACGTcount: A:0.22, C:0.00, G:0.03, T:0.75
Consensus pattern (16 bp):
TTTTTATTTTTTATTA
Found at i:20857134 original size:10 final size:9
Alignment explanation
Indices: 20857063--20857133 Score: 60
Period size: 10 Copynumber: 7.9 Consensus size: 9
20857053 ATATGTGAGG
20857063 ATTTTTATT
1 ATTTTTATT
20857072 -TTTTT-TT
1 ATTTTTATT
*
20857079 -TATTTATT
1 ATTTTTATT
20857087 ATTATTTATT
1 ATT-TTTATT
*
20857097 ATGATTTATT
1 AT-TTTTATT
20857107 ATTTTT-TT
1 ATTTTTATT
20857115 ATTTTTTATGT
1 A-TTTTTAT-T
20857126 ATTTTTAT
1 ATTTTTAT
20857134 GAAATTTAAT
Statistics
Matches: 51, Mismatches: 4, Indels: 13
0.75 0.06 0.19
Matches are distributed among these distances:
7 6 0.12
8 10 0.20
9 9 0.18
10 24 0.47
11 2 0.04
ACGTcount: A:0.21, C:0.00, G:0.03, T:0.76
Consensus pattern (9 bp):
ATTTTTATT
Found at i:20859284 original size:9 final size:9
Alignment explanation
Indices: 20859270--20859314 Score: 54
Period size: 9 Copynumber: 5.0 Consensus size: 9
20859260 ACAAAAGAAA
20859270 TTTCTTTTT
1 TTTCTTTTT
20859279 TTTCTTTTT
1 TTTCTTTTT
* *
20859288 CTTCCTTTT
1 TTTCTTTTT
* *
20859297 TCTCATTTT
1 TTTCTTTTT
20859306 TTTCTTTTT
1 TTTCTTTTT
20859315 CAAGTGACTG
Statistics
Matches: 29, Mismatches: 7, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
9 29 1.00
ACGTcount: A:0.02, C:0.18, G:0.00, T:0.80
Consensus pattern (9 bp):
TTTCTTTTT
Found at i:20871664 original size:19 final size:21
Alignment explanation
Indices: 20871622--20871666 Score: 60
Period size: 20 Copynumber: 2.3 Consensus size: 21
20871612 GAACACATAG
*
20871622 ACATA-TATATAGCAATATCA
1 ACATATTATATAGCAATAACA
20871642 ACATATTAT-TAGCAA-AACA
1 ACATATTATATAGCAATAACA
20871661 ACATAT
1 ACATAT
20871667 AAGAAACAAA
Statistics
Matches: 23, Mismatches: 1, Indels: 3
0.85 0.04 0.11
Matches are distributed among these distances:
19 9 0.39
20 11 0.48
21 3 0.13
ACGTcount: A:0.51, C:0.16, G:0.04, T:0.29
Consensus pattern (21 bp):
ACATATTATATAGCAATAACA
Found at i:20872808 original size:11 final size:10
Alignment explanation
Indices: 20872782--20872855 Score: 59
Period size: 11 Copynumber: 7.6 Consensus size: 10
20872772 TTTAATAATA
20872782 AATAAAT-A-
1 AATAAATAAC
20872790 AATAAATAAC
1 AATAAATAAC
20872800 AATATAATAAC
1 AATA-AATAAC
20872811 AATAAAT-AC
1 AATAAATAAC
*
20872820 AAATTAAATAAA
1 -AA-TAAATAAC
20872832 AAT-AATAA-
1 AATAAATAAC
* *
20872840 AAGAGATAAC
1 AATAAATAAC
20872850 AATAAA
1 AATAAA
20872856 ACGGCATGAA
Statistics
Matches: 53, Mismatches: 5, Indels: 14
0.74 0.07 0.19
Matches are distributed among these distances:
8 9 0.17
9 12 0.23
10 14 0.26
11 17 0.32
12 1 0.02
ACGTcount: A:0.70, C:0.05, G:0.03, T:0.22
Consensus pattern (10 bp):
AATAAATAAC
Found at i:20872809 original size:50 final size:50
Alignment explanation
Indices: 20872755--20872853 Score: 116
Period size: 50 Copynumber: 2.0 Consensus size: 50
20872745 CATGTAATTA
*
20872755 AATAA-AAAAACATA-AAATTTAATAATAAATAAATAAATA-A-ATAACAATAT
1 AATAACAAAAA-ATACAAATTAAATAA-AAAT-AATAAA-AGAGATAACAATAT
*
20872805 AATAACAATAAATACAAATTAAATAAAAATAATAAAAGAGATAACAATA
1 AATAACAAAAAATACAAATTAAATAAAAATAATAAAAGAGATAACAATA
20872854 AAACGGCATG
Statistics
Matches: 43, Mismatches: 2, Indels: 8
0.81 0.04 0.15
Matches are distributed among these distances:
48 1 0.02
49 7 0.16
50 21 0.49
51 14 0.33
ACGTcount: A:0.70, C:0.05, G:0.02, T:0.23
Consensus pattern (50 bp):
AATAACAAAAAATACAAATTAAATAAAAATAATAAAAGAGATAACAATAT
Found at i:20872998 original size:19 final size:19
Alignment explanation
Indices: 20872974--20873031 Score: 53
Period size: 19 Copynumber: 2.9 Consensus size: 19
20872964 TTAGGCATAA
20872974 AAATAAATGACAAATAAAT
1 AAATAAATGACAAATAAAT
** * *
20872993 AAATAAACAAAAAATCAAT
1 AAATAAATGACAAATAAAT
*
20873012 AAATTAAATGTCAAAATAAA
1 AAA-TAAATGAC-AAATAAA
20873032 CAACTAAATA
Statistics
Matches: 28, Mismatches: 9, Indels: 2
0.72 0.23 0.05
Matches are distributed among these distances:
19 18 0.64
20 4 0.14
21 6 0.21
ACGTcount: A:0.69, C:0.07, G:0.03, T:0.21
Consensus pattern (19 bp):
AAATAAATGACAAATAAAT
Found at i:20873007 original size:15 final size:15
Alignment explanation
Indices: 20872972--20873014 Score: 52
Period size: 15 Copynumber: 2.9 Consensus size: 15
20872962 GATTAGGCAT
*
20872972 AAAAATAAAT-GACA
1 AAAAATAAATAAACA
20872986 AATAAATAAATAAACA
1 AA-AAATAAATAAACA
*
20873002 AAAAATCAATAAA
1 AAAAATAAATAAA
20873015 TTAAATGTCA
Statistics
Matches: 25, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
14 2 0.08
15 18 0.72
16 5 0.20
ACGTcount: A:0.74, C:0.07, G:0.02, T:0.16
Consensus pattern (15 bp):
AAAAATAAATAAACA
Found at i:20873278 original size:27 final size:25
Alignment explanation
Indices: 20873242--20873302 Score: 72
Period size: 27 Copynumber: 2.4 Consensus size: 25
20873232 TGCTTTGAAT
* *
20873242 TTTCTTTGAATGTATGTCTCAAAAAAA
1 TTTCTCTGAATGT-TGTAT-AAAAAAA
20873269 TTTCTCTGAATGTTGTATAAAAAAA
1 TTTCTCTGAATGTTGTATAAAAAAA
20873294 --TCTCTGAAT
1 TTTCTCTGAAT
20873303 CTTATTCCAA
Statistics
Matches: 32, Mismatches: 2, Indels: 4
0.84 0.05 0.11
Matches are distributed among these distances:
23 9 0.28
25 7 0.22
26 4 0.12
27 12 0.38
ACGTcount: A:0.36, C:0.11, G:0.11, T:0.41
Consensus pattern (25 bp):
TTTCTCTGAATGTTGTATAAAAAAA
Found at i:20874857 original size:52 final size:52
Alignment explanation
Indices: 20874796--20874896 Score: 139
Period size: 52 Copynumber: 1.9 Consensus size: 52
20874786 TAATAATCTG
* ** * *
20874796 AACAGCATAATAACTAATTATTTAAAATTAAACAATTTAATAATATTTTCTT
1 AACAACATAATAACTAACGAATTAAAATTAAACAATTAAATAATATTTTCTT
* *
20874848 AACAACATAATAATTAACGAATTAAAATTAAATAATTAAATAATATTTT
1 AACAACATAATAACTAACGAATTAAAATTAAACAATTAAATAATATTTT
20874897 ATTACCAATT
Statistics
Matches: 42, Mismatches: 7, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
52 42 1.00
ACGTcount: A:0.52, C:0.08, G:0.02, T:0.38
Consensus pattern (52 bp):
AACAACATAATAACTAACGAATTAAAATTAAACAATTAAATAATATTTTCTT
Found at i:20875072 original size:14 final size:14
Alignment explanation
Indices: 20875049--20875087 Score: 51
Period size: 14 Copynumber: 2.8 Consensus size: 14
20875039 AAAATTAGAT
*
20875049 AATAACAAATTGAG
1 AATAATAAATTGAG
*
20875063 AATAATAAATCGAG
1 AATAATAAATTGAG
*
20875077 AACAATAAATT
1 AATAATAAATT
20875088 AACACTATGT
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
14 21 1.00
ACGTcount: A:0.59, C:0.08, G:0.10, T:0.23
Consensus pattern (14 bp):
AATAATAAATTGAG
Found at i:20879444 original size:69 final size:69
Alignment explanation
Indices: 20879333--20879490 Score: 307
Period size: 69 Copynumber: 2.3 Consensus size: 69
20879323 ATTGCTGATT
20879333 CTTCACAGCTCGTGTGAGCAGCATCCTGTAGCCTAACATCTCGATCCACAGCTCATGTGAGCAGA
1 CTTCACAGCTCGTGTGAGCAGCATCCTGTAGCCTAACATCTCGATCCACAGCTCATGTGAGCAGA
20879398 CCCA
66 CCCA
20879402 CTTCACAGCTCGTGTGAGCAGCATCCTGTAGCCTAACATCTCGATCCACAGCTCATGTGAGCAGA
1 CTTCACAGCTCGTGTGAGCAGCATCCTGTAGCCTAACATCTCGATCCACAGCTCATGTGAGCAGA
20879467 CCCA
66 CCCA
*
20879471 CTTCACAGCTCGTGTTAGCA
1 CTTCACAGCTCGTGTGAGCA
20879491 TTACAGGTTT
Statistics
Matches: 88, Mismatches: 1, Indels: 0
0.99 0.01 0.00
Matches are distributed among these distances:
69 88 1.00
ACGTcount: A:0.24, C:0.33, G:0.20, T:0.23
Consensus pattern (69 bp):
CTTCACAGCTCGTGTGAGCAGCATCCTGTAGCCTAACATCTCGATCCACAGCTCATGTGAGCAGA
CCCA
Found at i:20879778 original size:158 final size:158
Alignment explanation
Indices: 20879405--20879807 Score: 542
Period size: 159 Copynumber: 2.5 Consensus size: 158
20879395 AGACCCACTT
* * * *
20879405 CACAGCTCGTGTGAGCAGCATCCTGTAGCCTAACATCTCGATCCACAGCTCATGTGAGCAGACCC
1 CACAGCTCGTGTGAGCAGCATCGTGTAGCCTAACATCTCGACCCACAGCTCGTGTGAGCAAACCC
* * * * *
20879470 ACTTCACAGCTCGTGTTAGCATTACAGGTTTTATGGGTGCTGGTCTTAAATGTCCTACCGATGGT
66 ATTTCACAGCTCGTGTGAGCATTACAGGTTATATGGATGCTGGTCTTAAATGTCCTACCGATGGC
* **
20879535 TGAGTTCCTGCATTATTTTGTGGATTCTC
131 TGAGGTCCTGCATTA-TTTACGGATTCTC
* * *
20879564 CACGGCTCGTGTGAGCAACATCGTGTAGCCTAACATCTCGACCCACAGCTCGTGTGAACAAACCC
1 CACAGCTCGTGTGAGCAGCATCGTGTAGCCTAACATCTCGACCCACAGCTCGTGTGAGCAAACCC
* * *
20879629 GTTTCATAGCTCGTGTGAGCATTACAGGTTATATGGATGCTGGTCTTAGATGTCCTACCGATGGC
66 ATTTCACAGCTCGTGTGAGCATTACAGGTTATATGGATGCTGGTCTTAAATGTCCTACCGATGGC
20879694 TGAGGTCC-GACATCTA-TTACGGATTCTC
131 TGAGGTCCTG-CAT-TATTTACGGATTCTC
* * *
20879722 CACAACTCGTGTGAGCAGCATCGTGTAGGCC-CACATCTCGACCCACAGCTCGTGTGAGCTAACC
1 CACAGCTCGTGTGAGCAGCATCGTGTA-GCCTAACATCTCGACCCACAGCTCGTGTGAGCAAACC
* *
20879786 CATTTCACAACTTGTGTGAGCA
65 CATTTCACAGCTCGTGTGAGCA
20879808 GACCCATTTC
Statistics
Matches: 213, Mismatches: 28, Indels: 7
0.86 0.11 0.03
Matches are distributed among these distances:
158 83 0.39
159 128 0.60
160 2 0.01
ACGTcount: A:0.22, C:0.27, G:0.23, T:0.28
Consensus pattern (158 bp):
CACAGCTCGTGTGAGCAGCATCGTGTAGCCTAACATCTCGACCCACAGCTCGTGTGAGCAAACCC
ATTTCACAGCTCGTGTGAGCATTACAGGTTATATGGATGCTGGTCTTAAATGTCCTACCGATGGC
TGAGGTCCTGCATTATTTACGGATTCTC
Found at i:20879802 original size:26 final size:26
Alignment explanation
Indices: 20879765--20879833 Score: 95
Period size: 26 Copynumber: 2.7 Consensus size: 26
20879755 CATCTCGACC
*
20879765 CACAGCTCGTGTGAGCTA-ACCCATTT
1 CACAACTCGTGTGAGC-AGACCCATTT
*
20879791 CACAACTTGTGTGAGCAGACCCATTT
1 CACAACTCGTGTGAGCAGACCCATTT
*
20879817 CACAGCTCGTGTGAGCA
1 CACAACTCGTGTGAGCA
20879834 TATATGGTTA
Statistics
Matches: 38, Mismatches: 4, Indels: 2
0.86 0.09 0.05
Matches are distributed among these distances:
25 1 0.03
26 37 0.97
ACGTcount: A:0.25, C:0.29, G:0.22, T:0.25
Consensus pattern (26 bp):
CACAACTCGTGTGAGCAGACCCATTT
Found at i:20880117 original size:13 final size:13
Alignment explanation
Indices: 20880092--20880159 Score: 61
Period size: 13 Copynumber: 5.4 Consensus size: 13
20880082 ACATGGATAA
*
20880092 ATGAAATG-GTAT
1 ATGAAATGATTAT
20880104 ATGAAATGATTAT
1 ATGAAATGATTAT
* *
20880117 AAGATATGATTAT
1 ATGAAATGATTAT
*
20880130 AATG-AATGATTTT
1 -ATGAAATGATTAT
*
20880143 ATGAAATG-GTAT
1 ATGAAATGATTAT
20880155 ATGAA
1 ATGAA
20880160 TATATATATA
Statistics
Matches: 45, Mismatches: 8, Indels: 6
0.76 0.14 0.10
Matches are distributed among these distances:
12 18 0.40
13 25 0.56
14 2 0.04
ACGTcount: A:0.44, C:0.00, G:0.19, T:0.37
Consensus pattern (13 bp):
ATGAAATGATTAT
Found at i:20880166 original size:2 final size:2
Alignment explanation
Indices: 20880159--20880184 Score: 52
Period size: 2 Copynumber: 13.0 Consensus size: 2
20880149 TGGTATATGA
20880159 AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT
20880185 GAATGGAGAT
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 24 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:20882903 original size:14 final size:15
Alignment explanation
Indices: 20882876--20882918 Score: 54
Period size: 14 Copynumber: 3.0 Consensus size: 15
20882866 TATATAATAT
*
20882876 AAAAGAATAAAGAAA
1 AAAAGAAGAAAGAAA
*
20882891 AGAA-AAGAAAGAAA
1 AAAAGAAGAAAGAAA
20882905 AAAAGAAG-AAGAAA
1 AAAAGAAGAAAGAAA
20882919 GAACAGAGGC
Statistics
Matches: 24, Mismatches: 3, Indels: 3
0.80 0.10 0.10
Matches are distributed among these distances:
14 18 0.75
15 6 0.25
ACGTcount: A:0.79, C:0.00, G:0.19, T:0.02
Consensus pattern (15 bp):
AAAAGAAGAAAGAAA
Found at i:20882918 original size:18 final size:17
Alignment explanation
Indices: 20882888--20882921 Score: 59
Period size: 18 Copynumber: 1.9 Consensus size: 17
20882878 AAGAATAAAG
20882888 AAAAGAAAAGAAAGAAA
1 AAAAGAAAAGAAAGAAA
20882905 AAAAGAAGAAGAAAGAA
1 AAAAGAA-AAGAAAGAA
20882922 CAGAGGCTCA
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
17 7 0.44
18 9 0.56
ACGTcount: A:0.79, C:0.00, G:0.21, T:0.00
Consensus pattern (17 bp):
AAAAGAAAAGAAAGAAA
Found at i:20889132 original size:47 final size:47
Alignment explanation
Indices: 20889079--20889168 Score: 153
Period size: 47 Copynumber: 1.9 Consensus size: 47
20889069 TAAATGGAAT
*
20889079 ACTCATGTCTAAAGATGAGAATGAGATTATGATTAAAGGAAGAGAAG
1 ACTCATGTCTAAAGAAGAGAATGAGATTATGATTAAAGGAAGAGAAG
**
20889126 ACTCATGTCTCGAGAAGAGAATGAGATTATGATTAAAGGAAGA
1 ACTCATGTCTAAAGAAGAGAATGAGATTATGATTAAAGGAAGA
20889169 CTCATGTCTC
Statistics
Matches: 40, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
47 40 1.00
ACGTcount: A:0.43, C:0.08, G:0.26, T:0.23
Consensus pattern (47 bp):
ACTCATGTCTAAAGAAGAGAATGAGATTATGATTAAAGGAAGAGAAG
Found at i:20889168 original size:42 final size:42
Alignment explanation
Indices: 20889028--20889193 Score: 149
Period size: 47 Copynumber: 3.8 Consensus size: 42
20889018 TGATGTATAA
* * *
20889028 AAAGGAAGACTTATGTCTCGGGTTGA-ACATGAGAATT-TG-TAT
1 AAAGGAAGACTCATGTCTCGAGATGAGA-ATGAG-ATTATGAT-T
* **
20889070 AAATGGAATACTCATGTCTAAAGATGAGAATGAGATTATGATT
1 AAA-GGAAGACTCATGTCTCGAGATGAGAATGAGATTATGATT
*
20889113 AAAGGAAGAGAAGACTCATGTCTCGAGAAGAGAATGAGATTATGATT
1 --A--AAG-GAAGACTCATGTCTCGAGATGAGAATGAGATTATGATT
* *
20889160 AAAGGAAGACTCATGTCTCGGGATGGGAATGAGA
1 AAAGGAAGACTCATGTCTCGAGATGAGAATGAGA
20889194 ATATAATTTA
Statistics
Matches: 102, Mismatches: 13, Indels: 18
0.77 0.10 0.14
Matches are distributed among these distances:
42 33 0.32
43 28 0.27
44 2 0.02
45 2 0.02
46 1 0.01
47 36 0.35
ACGTcount: A:0.39, C:0.09, G:0.27, T:0.25
Consensus pattern (42 bp):
AAAGGAAGACTCATGTCTCGAGATGAGAATGAGATTATGATT
Found at i:20889905 original size:21 final size:21
Alignment explanation
Indices: 20889877--20889952 Score: 66
Period size: 21 Copynumber: 3.6 Consensus size: 21
20889867 GAGTTTTTAA
20889877 TATCGGTAGAAGCTTA-ACTAG
1 TATCGGTAGAAG-TTACACTAG
* * *
20889898 TTTCGGTAGATGTTACACTTG
1 TATCGGTAGAAGTTACACTAG
* * *
20889919 TATCGGTAGAA-CTATCACAAA
1 TATCGGTAGAAGTTA-CACTAG
20889940 TATCGGTAGAAGT
1 TATCGGTAGAAGT
20889953 CTGCACTATT
Statistics
Matches: 42, Mismatches: 10, Indels: 5
0.74 0.18 0.09
Matches are distributed among these distances:
20 5 0.12
21 37 0.88
ACGTcount: A:0.32, C:0.14, G:0.22, T:0.32
Consensus pattern (21 bp):
TATCGGTAGAAGTTACACTAG
Found at i:20890466 original size:14 final size:14
Alignment explanation
Indices: 20890449--20890499 Score: 50
Period size: 14 Copynumber: 3.4 Consensus size: 14
20890439 ATTTTTATGT
20890449 TATAAAATTTAACA
1 TATAAAATTTAACA
*
20890463 TAT-AAATTATGACA
1 TATAAAATT-TAACA
20890477 TATAAACTAATTTAACA
1 TAT-AA--AATTTAACA
20890494 TATAAA
1 TATAAA
20890500 TTAGGACATA
Statistics
Matches: 30, Mismatches: 2, Indels: 10
0.71 0.05 0.24
Matches are distributed among these distances:
13 5 0.17
14 11 0.37
16 3 0.10
17 7 0.23
18 4 0.13
ACGTcount: A:0.55, C:0.08, G:0.02, T:0.35
Consensus pattern (14 bp):
TATAAAATTTAACA
Found at i:20896532 original size:58 final size:58
Alignment explanation
Indices: 20896460--20896597 Score: 181
Period size: 58 Copynumber: 2.4 Consensus size: 58
20896450 CTACCAAAAA
* * * *
20896460 AATAATTATATTAAAAATGTTATTAAATTATATATTA-TTTTATTAAATTGTATTTAAT
1 AATAATTATATT-AAAATATAATTAAATTATATATTATTTTTATGAAATTATATTTAAT
* *
20896518 AATAATTATGTTAAAATATAATTAAATTATTTATTATTTTTATGAAATTATATTTAAT
1 AATAATTATATTAAAATATAATTAAATTATATATTATTTTTATGAAATTATATTTAAT
*
20896576 AATAATCT-TATTAAAATTTAAT
1 AATAAT-TATATTAAAATATAAT
20896598 AACAATAATC
Statistics
Matches: 70, Mismatches: 8, Indels: 4
0.85 0.10 0.05
Matches are distributed among these distances:
57 21 0.30
58 48 0.69
59 1 0.01
ACGTcount: A:0.46, C:0.01, G:0.03, T:0.51
Consensus pattern (58 bp):
AATAATTATATTAAAATATAATTAAATTATATATTATTTTTATGAAATTATATTTAAT
Found at i:20896782 original size:16 final size:16
Alignment explanation
Indices: 20896763--20896808 Score: 65
Period size: 16 Copynumber: 2.9 Consensus size: 16
20896753 ATTATAATCA
20896763 TATTCTATTACAGCTC
1 TATTCTATTACAGCTC
* * *
20896779 TATTTTATTACAGTTT
1 TATTCTATTACAGCTC
20896795 TATTCTATTACAGC
1 TATTCTATTACAGC
20896809 GAATCATAGG
Statistics
Matches: 25, Mismatches: 5, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
16 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.07, T:0.50
Consensus pattern (16 bp):
TATTCTATTACAGCTC
Found at i:20901359 original size:26 final size:27
Alignment explanation
Indices: 20901305--20901360 Score: 80
Period size: 26 Copynumber: 2.1 Consensus size: 27
20901295 TAAAATAAAG
*
20901305 AAAATATTAATAAATATTTATTTGCAT
1 AAAATATTAATAAATATTTATTTGAAT
20901332 AAAATATT-ATATAAT-TTTATTTGAAT
1 AAAATATTAATA-AATATTTATTTGAAT
20901358 AAA
1 AAA
20901361 TTTTTATTAA
Statistics
Matches: 27, Mismatches: 1, Indels: 3
0.87 0.03 0.10
Matches are distributed among these distances:
26 16 0.59
27 11 0.41
ACGTcount: A:0.50, C:0.02, G:0.04, T:0.45
Consensus pattern (27 bp):
AAAATATTAATAAATATTTATTTGAAT
Found at i:20901367 original size:26 final size:25
Alignment explanation
Indices: 20901305--20901371 Score: 71
Period size: 26 Copynumber: 2.6 Consensus size: 25
20901295 TAAAATAAAG
* *
20901305 AAAATATTAATAAATATTTATTTGCAT
1 AAAATATT-ATTAAT-TTTATTTGAAT
20901332 AAAATATTATATAATTTTATTTGAAT
1 AAAATATTAT-TAATTTTATTTGAAT
* *
20901358 AAATTTTTATTAAT
1 AAAATATTATTAAT
20901372 AATGATTTCA
Statistics
Matches: 35, Mismatches: 4, Indels: 4
0.81 0.09 0.09
Matches are distributed among these distances:
25 4 0.11
26 20 0.57
27 11 0.31
ACGTcount: A:0.46, C:0.01, G:0.03, T:0.49
Consensus pattern (25 bp):
AAAATATTATTAATTTTATTTGAAT
Found at i:20908763 original size:17 final size:16
Alignment explanation
Indices: 20908737--20908768 Score: 55
Period size: 17 Copynumber: 1.9 Consensus size: 16
20908727 AATTTTAATT
20908737 AATTAATTAATTTTCC
1 AATTAATTAATTTTCC
20908753 AATTAAATTAATTTTC
1 AATT-AATTAATTTTC
20908769 TCAACTCGAT
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
16 4 0.27
17 11 0.73
ACGTcount: A:0.41, C:0.09, G:0.00, T:0.50
Consensus pattern (16 bp):
AATTAATTAATTTTCC
Found at i:20908872 original size:15 final size:15
Alignment explanation
Indices: 20908852--20908881 Score: 51
Period size: 15 Copynumber: 2.0 Consensus size: 15
20908842 TTGCGCAACG
20908852 AAAAAATAAAAAATT
1 AAAAAATAAAAAATT
*
20908867 AAAAAATTAAAAATT
1 AAAAAATAAAAAATT
20908882 GAGTTGGTTT
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
15 14 1.00
ACGTcount: A:0.77, C:0.00, G:0.00, T:0.23
Consensus pattern (15 bp):
AAAAAATAAAAAATT
Found at i:20911288 original size:13 final size:13
Alignment explanation
Indices: 20911270--20911298 Score: 58
Period size: 13 Copynumber: 2.2 Consensus size: 13
20911260 AAAACAGAGA
20911270 AAAGACAAAGAAG
1 AAAGACAAAGAAG
20911283 AAAGACAAAGAAG
1 AAAGACAAAGAAG
20911296 AAA
1 AAA
20911299 AAAAACAAAA
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 16 1.00
ACGTcount: A:0.72, C:0.07, G:0.21, T:0.00
Consensus pattern (13 bp):
AAAGACAAAGAAG
Found at i:20917150 original size:6 final size:6
Alignment explanation
Indices: 20917135--20917192 Score: 59
Period size: 6 Copynumber: 9.8 Consensus size: 6
20917125 AAAAGAGAAG
* *
20917135 AAAAGAA AAAAGAA AAAAGG AAAAGA AGAAG- -AAAGA AAAAGA AAAAG-
1 AAAAG-A AAAAG-A AAAAGA AAAAGA AAAAGA AAAAGA AAAAGA AAAAGA
20917182 AAAAGA AAAAG
1 AAAAGA AAAAG
20917193 GAGGGGTCGA
Statistics
Matches: 44, Mismatches: 4, Indels: 7
0.80 0.07 0.13
Matches are distributed among these distances:
4 3 0.07
5 5 0.11
6 24 0.55
7 12 0.27
ACGTcount: A:0.79, C:0.00, G:0.21, T:0.00
Consensus pattern (6 bp):
AAAAGA
Found at i:20917163 original size:16 final size:17
Alignment explanation
Indices: 20917124--20917192 Score: 85
Period size: 16 Copynumber: 4.4 Consensus size: 17
20917114 TTTCACCCAA
20917124 AAAAAG-AGAAGAAAAG
1 AAAAAGAAGAAGAAAAG
20917140 -AAAA-AAGAA-AAAAG
1 AAAAAGAAGAAGAAAAG
*
20917154 GAAAAGAAGAAG-AAAG
1 AAAAAGAAGAAGAAAAG
*
20917170 AAAAAGAAAAAGAAAAG
1 AAAAAGAAGAAGAAAAG
20917187 AAAAAG
1 AAAAAG
20917193 GAGGGGTCGA
Statistics
Matches: 46, Mismatches: 2, Indels: 9
0.81 0.04 0.16
Matches are distributed among these distances:
14 5 0.11
15 12 0.26
16 19 0.41
17 10 0.22
ACGTcount: A:0.78, C:0.00, G:0.22, T:0.00
Consensus pattern (17 bp):
AAAAAGAAGAAGAAAAG
Found at i:20917180 original size:22 final size:22
Alignment explanation
Indices: 20917144--20917189 Score: 67
Period size: 22 Copynumber: 2.1 Consensus size: 22
20917134 GAAAAGAAAA
*
20917144 AAGAAAAAAGGAAAAGAAGAAGA
1 AAGAAAAAAGAAAAAGAA-AAGA
20917167 AAG-AAAAAGAAAAAGAAAAGA
1 AAGAAAAAAGAAAAAGAAAAGA
20917188 AA
1 AA
20917190 AAGGAGGGGT
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
21 6 0.27
22 13 0.59
23 3 0.14
ACGTcount: A:0.78, C:0.00, G:0.22, T:0.00
Consensus pattern (22 bp):
AAGAAAAAAGAAAAAGAAAAGA
Found at i:20917506 original size:22 final size:21
Alignment explanation
Indices: 20917479--20917525 Score: 58
Period size: 22 Copynumber: 2.2 Consensus size: 21
20917469 CAATGTTTGC
*
20917479 TTTTTTACCAACATTTACCAAT
1 TTTTTTACAAACATTTA-CAAT
**
20917501 TTTTTTACAAATTTTTACAAT
1 TTTTTTACAAACATTTACAAT
20917522 TTTT
1 TTTT
20917526 GGCAATTGAT
Statistics
Matches: 22, Mismatches: 3, Indels: 1
0.85 0.12 0.04
Matches are distributed among these distances:
21 8 0.36
22 14 0.64
ACGTcount: A:0.30, C:0.15, G:0.00, T:0.55
Consensus pattern (21 bp):
TTTTTTACAAACATTTACAAT
Found at i:20918320 original size:81 final size:81
Alignment explanation
Indices: 20918177--20918853 Score: 883
Period size: 81 Copynumber: 8.3 Consensus size: 81
20918167 AGAGCAAGAC
* * * *
20918177 GAAGACATCATCCAATCTCTTACCCCGATCATGAAGCAGATTGAAGCCATCTAATCTTTTACCCT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAGGCAGATTGAAGCCATCCAATCTTTTACCCT
*
20918242 AACCAGAGGGCAGATT
66 AACTAGAGGGCAGATT
* * * *
20918258 GAAAACACCATCCATTCTCTTACCCCGACCATGAGGTAGATTGAAGTCATCCAATCTTTTACCCT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAGGCAGATTGAAGCCATCCAATCTTTTACCCT
20918323 AACTAGAGGGCAGATT
66 AACTAGAGGGCAGATT
* *
20918339 GAAGACACCATCCAATCTCTTACCCCGACCATGGGGCAGATTAAAGCCATCCAATCTTTTACCCT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAGGCAGATTGAAGCCATCCAATCTTTTACCCT
* * *
20918404 AACCAGAAGGTAGATT
66 AACTAGAGGGCAGATT
* * *
20918420 GAAGACACCATCCAATCTCTTACCCCGACCATGGGGCAGATTAAAGCTATCCAATCTTTTA-CCT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAGGCAGATTGAAGCCATCCAATCTTTTACCCT
* * * *
20918484 AACTAAAGTGCAAATA
66 AACTAGAGGGCAGATT
* * * *
20918500 GAAGACACCATCCAATCTCTTACCCCGACCCTG-GGACATATTGAAGCCATCCAATCCTTTACCT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAGG-CAGATTGAAGCCATCCAATCTTTTACCC
*
20918564 TAACTAGAAGGCAGATT
65 TAACTAGAGGGCAGATT
* * *
20918581 GAAAACACCATCCAATCTCTTACCCCGACCATGGGGCAAATTGAAGCCATCCAATCTTTTACCCT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAGGCAGATTGAAGCCATCCAATCTTTTACCCT
* *
20918646 AACCAGAGGGTAGATT
66 AACTAGAGGGCAGATT
* * * * * *
20918662 GAAGACACCATCCAATCTCTTACCTCGACCGTTAGGCAGATTGAAGTCATCCAATCTTTCACACT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAGGCAGATTGAAGCCATCCAATCTTTTACCCT
*
20918727 AATTAGAGGGCAGATT
66 AACTAGAGGGCAGATT
* * *
20918743 GAAGACACCATCCAATCTCTTACCCCGATCATAAGGCAGATTGAAGCCATACAATCTTTTACCCC
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAGGCAGATTGAAGCCATCCAATCTTTTA-CCC
*
20918808 TATAACAATAGA-GGTAGATT
65 --TAAC--TAGAGGGCAGATT
* *
20918828 GAAGCCACCATCCAATCTTTTACCCC
1 GAAGACACCATCCAATCTCTTACCCC
20918854 TAAATCAAGA
Statistics
Matches: 519, Mismatches: 69, Indels: 12
0.87 0.12 0.02
Matches are distributed among these distances:
79 2 0.00
80 65 0.13
81 410 0.79
82 4 0.01
84 3 0.01
85 31 0.06
86 4 0.01
ACGTcount: A:0.32, C:0.29, G:0.15, T:0.24
Consensus pattern (81 bp):
GAAGACACCATCCAATCTCTTACCCCGACCATGAGGCAGATTGAAGCCATCCAATCTTTTACCCT
AACTAGAGGGCAGATT
Found at i:20918765 original size:323 final size:323
Alignment explanation
Indices: 20918177--20918805 Score: 927
Period size: 323 Copynumber: 1.9 Consensus size: 323
20918167 AGAGCAAGAC
* * * *
20918177 GAAGACATCATCCAATCTCTTACCCCGATCATGAAGCAGATTGAAGCCATCTAATCTTTTACCCT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAAGCAGATTGAAGCCATCCAATCCTTTACCCT
* * * * *
20918242 AACCAGAGGGCAGATTGAAAACACCATCCATTCTCTTACCCCGACCATGAGGTAGATTGAAGTCA
66 AACCAGAAGGCAGATTGAAAACACCATCCAATCTCTTACCCCGACCATGAGGCAAATTGAAGCCA
*
20918307 TCCAATCTTTTACCCTAACTAGAGGGCAGATTGAAGACACCATCCAATCTCTTACCCCGACCATG
131 TCCAATCTTTTACCCTAACCAGAGGGCAGATTGAAGACACCATCCAATCTCTTACCCCGACCATG
* * * *
20918372 GGGCAGATTAAAGCCATCCAATCTTTTACCCTAACCAGAAGGTAGATTGAAGACACCATCCAATC
196 AGGCAGATTAAAGCCATCCAATCTTTCACACTAACCAGAAGGCAGATTGAAGACACCATCCAATC
** * *
20918437 TCTTACCCCGACCATGGGGCAGATTAAAGCTATCCAATCTTTTACCTAACTAAAGTGCAAATA
261 TCTTACCCCGACCATAAGGCAGATTAAAGCCATACAATCTTTTACCTAACTAAAGTGCAAATA
* * * *
20918500 GAAGACACCATCCAATCTCTTACCCCGACCCTG-GGACATATTGAAGCCATCCAATCCTTTACCT
1 GAAGACACCATCCAATCTCTTACCCCGACCATGAAG-CAGATTGAAGCCATCCAATCCTTTACCC
* *
20918564 TAACTAGAAGGCAGATTGAAAACACCATCCAATCTCTTACCCCGACCATGGGGCAAATTGAAGCC
65 TAACCAGAAGGCAGATTGAAAACACCATCCAATCTCTTACCCCGACCATGAGGCAAATTGAAGCC
* * *
20918629 ATCCAATCTTTTACCCTAACCAGAGGGTAGATTGAAGACACCATCCAATCTCTTACCTCGACCGT
130 ATCCAATCTTTTACCCTAACCAGAGGGCAGATTGAAGACACCATCCAATCTCTTACCCCGACCAT
* * * ** *
20918694 TAGGCAGATTGAAGTCATCCAATCTTTCACACTAATTAGAGGGCAGATTGAAGACACCATCCAAT
195 GAGGCAGATTAAAGCCATCCAATCTTTCACACTAACCAGAAGGCAGATTGAAGACACCATCCAAT
* *
20918759 CTCTTACCCCGATCATAAGGCAGATTGAAGCCATACAATCTTTTACC
260 CTCTTACCCCGACCATAAGGCAGATTAAAGCCATACAATCTTTTACC
20918806 CCTATAACAA
Statistics
Matches: 270, Mismatches: 35, Indels: 2
0.88 0.11 0.01
Matches are distributed among these distances:
322 1 0.00
323 269 1.00
ACGTcount: A:0.32, C:0.28, G:0.15, T:0.24
Consensus pattern (323 bp):
GAAGACACCATCCAATCTCTTACCCCGACCATGAAGCAGATTGAAGCCATCCAATCCTTTACCCT
AACCAGAAGGCAGATTGAAAACACCATCCAATCTCTTACCCCGACCATGAGGCAAATTGAAGCCA
TCCAATCTTTTACCCTAACCAGAGGGCAGATTGAAGACACCATCCAATCTCTTACCCCGACCATG
AGGCAGATTAAAGCCATCCAATCTTTCACACTAACCAGAAGGCAGATTGAAGACACCATCCAATC
TCTTACCCCGACCATAAGGCAGATTAAAGCCATACAATCTTTTACCTAACTAAAGTGCAAATA
Found at i:20918851 original size:46 final size:45
Alignment explanation
Indices: 20918735--20918961 Score: 243
Period size: 46 Copynumber: 5.1 Consensus size: 45
20918725 CTAATTAGAG
* * * *
20918735 GGCAGATTGAAGACACCATCCAATCTCTTACCCC--GATC-ATAA
1 GGCAGATTGAAGCCACCATCCAATCTTTTACCCCTAAATCAAGAA
* *
20918777 GGCAGATTGAAG---CCATACAATCTTTTACCCCTATAA-CAATAGA
1 GGCAGATTGAAGCCACCATCCAATCTTTTACCCCTA-AATCAAGA-A
* *
20918820 GGTAGATTGAAGCCACCATCCAATCTTTTACCCCTAAATCAAGAG
1 GGCAGATTGAAGCCACCATCCAATCTTTTACCCCTAAATCAAGAA
* *
20918865 GGCCCGATTGAAGCCACCATCTAATCTTTTACCCCTAAATCAAGAA
1 GG-CAGATTGAAGCCACCATCCAATCTTTTACCCCTAAATCAAGAA
* * *
20918911 GAGAATATTGAAGCCACCACCCAATCTTTTACCCCTAAATCAAGAGA
1 G-GCAGATTGAAGCCACCATCCAATCTTTTACCCCTAAATCAAGA-A
20918958 GGCA
1 GGCA
20918962 AGTTAAAGTC
Statistics
Matches: 156, Mismatches: 17, Indels: 20
0.81 0.09 0.10
Matches are distributed among these distances:
39 17 0.11
41 1 0.01
42 16 0.10
43 12 0.08
45 4 0.03
46 103 0.66
47 3 0.02
ACGTcount: A:0.35, C:0.28, G:0.15, T:0.23
Consensus pattern (45 bp):
GGCAGATTGAAGCCACCATCCAATCTTTTACCCCTAAATCAAGAA
Found at i:20920626 original size:16 final size:16
Alignment explanation
Indices: 20920605--20920643 Score: 53
Period size: 16 Copynumber: 2.4 Consensus size: 16
20920595 ACCCAAAACT
*
20920605 AACCCAAA-TAACCCTA
1 AACCCAAATTAAACC-A
20920621 AACCCAAATTAAACCA
1 AACCCAAATTAAACCA
20920637 AACCCAA
1 AACCCAA
20920644 CACCTAAACC
Statistics
Matches: 21, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
16 16 0.76
17 5 0.24
ACGTcount: A:0.54, C:0.36, G:0.00, T:0.10
Consensus pattern (16 bp):
AACCCAAATTAAACCA
Found at i:20920755 original size:21 final size:21
Alignment explanation
Indices: 20920730--20920774 Score: 81
Period size: 21 Copynumber: 2.1 Consensus size: 21
20920720 TTAACCATTA
20920730 ACTGTTGACAGTTGATCGTTG
1 ACTGTTGACAGTTGATCGTTG
*
20920751 ACTGTTGACTGTTGATCGTTG
1 ACTGTTGACAGTTGATCGTTG
20920772 ACT
1 ACT
20920775 TTTTTTTAAG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
21 23 1.00
ACGTcount: A:0.18, C:0.16, G:0.27, T:0.40
Consensus pattern (21 bp):
ACTGTTGACAGTTGATCGTTG
Found at i:20930874 original size:14 final size:14
Alignment explanation
Indices: 20930857--20930908 Score: 54
Period size: 14 Copynumber: 3.6 Consensus size: 14
20930847 ATAAACATAA
20930857 TTTATTAAATTAAT
1 TTTATTAAATTAAT
*
20930871 TTTAATAAATTAATT
1 TTTATTAAATTAA-T
20930886 TTTGAATTAAA-TAAT
1 TTT--ATTAAATTAAT
20930901 TTT-TTAAA
1 TTTATTAAA
20930909 CCCAATTTTA
Statistics
Matches: 33, Mismatches: 2, Indels: 8
0.77 0.05 0.19
Matches are distributed among these distances:
12 5 0.15
14 12 0.36
15 8 0.24
16 3 0.09
17 5 0.15
ACGTcount: A:0.44, C:0.00, G:0.02, T:0.54
Consensus pattern (14 bp):
TTTATTAAATTAAT
Found at i:20930902 original size:16 final size:16
Alignment explanation
Indices: 20930860--20930904 Score: 60
Period size: 16 Copynumber: 2.9 Consensus size: 16
20930850 AACATAATTT
20930860 ATTAAATTAA-TTTTA
1 ATTAAATTAATTTTTA
20930875 A-TAAATTAATTTTTGA
1 ATTAAATTAATTTTT-A
20930891 ATTAAA-TAATTTTT
1 ATTAAATTAATTTTT
20930905 TAAACCCAAT
Statistics
Matches: 27, Mismatches: 0, Indels: 5
0.84 0.00 0.16
Matches are distributed among these distances:
14 8 0.30
15 5 0.19
16 10 0.37
17 4 0.15
ACGTcount: A:0.44, C:0.00, G:0.02, T:0.53
Consensus pattern (16 bp):
ATTAAATTAATTTTTA
Found at i:20947229 original size:21 final size:20
Alignment explanation
Indices: 20947205--20947250 Score: 56
Period size: 20 Copynumber: 2.2 Consensus size: 20
20947195 GAAAAGTATC
20947205 TACAAAAAGAATCTTTAAGAT
1 TACAAAAA-AATCTTTAAGAT
**
20947226 TACAATCAAATCTTTAAGAT
1 TACAAAAAAATCTTTAAGAT
*
20947246 CACAA
1 TACAA
20947251 GGATCATATC
Statistics
Matches: 22, Mismatches: 3, Indels: 1
0.85 0.12 0.04
Matches are distributed among these distances:
20 16 0.73
21 6 0.27
ACGTcount: A:0.50, C:0.15, G:0.07, T:0.28
Consensus pattern (20 bp):
TACAAAAAAATCTTTAAGAT
Found at i:20951758 original size:12 final size:12
Alignment explanation
Indices: 20951722--20951765 Score: 52
Period size: 12 Copynumber: 3.7 Consensus size: 12
20951712 TATATGCATG
*
20951722 CATACATATACA
1 CATACACATACA
* * *
20951734 AACACACACACA
1 CATACACATACA
20951746 CATACACATACA
1 CATACACATACA
20951758 CATACACA
1 CATACACA
20951766 CATATATGTA
Statistics
Matches: 25, Mismatches: 7, Indels: 0
0.78 0.22 0.00
Matches are distributed among these distances:
12 25 1.00
ACGTcount: A:0.52, C:0.34, G:0.00, T:0.14
Consensus pattern (12 bp):
CATACACATACA
Found at i:20951758 original size:20 final size:20
Alignment explanation
Indices: 20951725--20951769 Score: 63
Period size: 20 Copynumber: 2.2 Consensus size: 20
20951715 ATGCATGCAT
*
20951725 ACATATACAAACACACACAC
1 ACATACACAAACACACACAC
* *
20951745 ACATACACATACACATACAC
1 ACATACACAAACACACACAC
20951765 ACATA
1 ACATA
20951770 TATGTATATA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
20 22 1.00
ACGTcount: A:0.53, C:0.33, G:0.00, T:0.13
Consensus pattern (20 bp):
ACATACACAAACACACACAC
Found at i:20952527 original size:18 final size:16
Alignment explanation
Indices: 20952470--20952527 Score: 55
Period size: 18 Copynumber: 3.4 Consensus size: 16
20952460 TTTACAAATT
*
20952470 AAAAAATAATTTTATAA
1 AAAAAATAATTATAT-A
20952487 AAAAGAATAATTATAT-
1 AAAA-AATAATTATATA
*
20952503 TAAAAATAAATTATATA
1 AAAAAAT-AATTATATA
20952520 AAACAAAT
1 AAA-AAAT
20952528 TAATATGGAT
Statistics
Matches: 34, Mismatches: 3, Indels: 7
0.77 0.07 0.16
Matches are distributed among these distances:
15 3 0.09
16 11 0.32
17 6 0.18
18 14 0.41
ACGTcount: A:0.66, C:0.02, G:0.02, T:0.31
Consensus pattern (16 bp):
AAAAAATAATTATATA
Found at i:20955628 original size:12 final size:12
Alignment explanation
Indices: 20955611--20955637 Score: 54
Period size: 12 Copynumber: 2.2 Consensus size: 12
20955601 CTTCTCTCTT
20955611 ATTCTTATTATA
1 ATTCTTATTATA
20955623 ATTCTTATTATA
1 ATTCTTATTATA
20955635 ATT
1 ATT
20955638 TTCTTAGTTT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 15 1.00
ACGTcount: A:0.33, C:0.07, G:0.00, T:0.59
Consensus pattern (12 bp):
ATTCTTATTATA
Found at i:20970897 original size:21 final size:21
Alignment explanation
Indices: 20970871--20970965 Score: 83
Period size: 21 Copynumber: 4.6 Consensus size: 21
20970861 AGCCTTTTAT
*
20970871 TTTGTTTCCTTATATATGGCC
1 TTTGTTTCCTTATATATAGCC
*
20970892 TTTGTTTCCTTATACATAGCC
1 TTTGTTTCCTTATATATAGCC
* *
20970913 ATTTATTTAGCCTT-T-TAT---T
1 -TTTGTTT--CCTTATATATAGCC
20970932 TTTGTTTCCTTATATATAGCC
1 TTTGTTTCCTTATATATAGCC
*
20970953 TTTGTTTCTTTAT
1 TTTGTTTCCTTAT
20970966 TTTTTAGGGT
Statistics
Matches: 58, Mismatches: 8, Indels: 16
0.71 0.10 0.20
Matches are distributed among these distances:
16 4 0.07
17 1 0.02
18 9 0.16
21 31 0.53
22 8 0.14
23 1 0.02
24 4 0.07
ACGTcount: A:0.17, C:0.17, G:0.09, T:0.57
Consensus pattern (21 bp):
TTTGTTTCCTTATATATAGCC
Found at i:20977500 original size:18 final size:18
Alignment explanation
Indices: 20977464--20977508 Score: 54
Period size: 18 Copynumber: 2.5 Consensus size: 18
20977454 GACAAAGTTA
**
20977464 TCGATGCAATTTTCAATG
1 TCGATGCAACATTCAATG
*
20977482 TCGATGCAACATTCTATG
1 TCGATGCAACATTCAATG
*
20977500 TCGAGGCAA
1 TCGATGCAA
20977509 ACAGATGACC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
18 23 1.00
ACGTcount: A:0.29, C:0.20, G:0.20, T:0.31
Consensus pattern (18 bp):
TCGATGCAACATTCAATG
Found at i:20984282 original size:18 final size:18
Alignment explanation
Indices: 20984259--20984305 Score: 67
Period size: 18 Copynumber: 2.6 Consensus size: 18
20984249 AGCAAAACAC
* *
20984259 CTTCAACTTCACTTTTTG
1 CTTCAACATCACTTCTTG
*
20984277 CTTCAACATCTCTTCTTG
1 CTTCAACATCACTTCTTG
20984295 CTTCAACATCA
1 CTTCAACATCA
20984306 AGATCTAAAA
Statistics
Matches: 25, Mismatches: 4, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
18 25 1.00
ACGTcount: A:0.21, C:0.32, G:0.04, T:0.43
Consensus pattern (18 bp):
CTTCAACATCACTTCTTG
Found at i:20985881 original size:21 final size:21
Alignment explanation
Indices: 20985837--20985884 Score: 60
Period size: 21 Copynumber: 2.3 Consensus size: 21
20985827 AGTGCAGACA
* *
20985837 TCTACCGATACAAGTGTCAGT
1 TCTACCGATACAAGTGACACT
* *
20985858 TCTATCGATACAAGTGACTCT
1 TCTACCGATACAAGTGACACT
20985879 TCTACC
1 TCTACC
20985885 AAAAAATGAC
Statistics
Matches: 22, Mismatches: 5, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
21 22 1.00
ACGTcount: A:0.27, C:0.27, G:0.15, T:0.31
Consensus pattern (21 bp):
TCTACCGATACAAGTGACACT
Found at i:20990620 original size:52 final size:52
Alignment explanation
Indices: 20990564--20990855 Score: 408
Period size: 52 Copynumber: 5.7 Consensus size: 52
20990554 GTATTGGGAA
* ** * * *
20990564 TCATATACTCACGATTATGCATAGCCATCGAACCTCATAATCCGTAAAGGAT
1 TCATATACTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGAT
* * *
20990616 TCATATACTCTCGATGACACATAGTCATCGAACCACATAATCCATAAAGGAT
1 TCATATACTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGAT
* * *
20990668 TCATATGCTCACGATGACATATAGTCATCGGACCACATAATCCATAAAGGAT
1 TCATATACTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGAT
*
20990720 TCATATACTCATGATG--ACATAGTCATCGGACCACATAATCCGTAAAGGAT
1 TCATATACTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGAT
* * *
20990770 TCATATGCTCATGATGACACATAGTCATCGGACCACGTAATCCGTAAAGGAT
1 TCATATACTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGAT
* *
20990822 TCATATACTCATGATGTCACATAGTCATCGGACC
1 TCATATACTCACGATGACACATAGTCATCGGACC
20990856 TATTTCATTT
Statistics
Matches: 219, Mismatches: 19, Indels: 4
0.90 0.08 0.02
Matches are distributed among these distances:
50 47 0.21
52 172 0.79
ACGTcount: A:0.35, C:0.24, G:0.15, T:0.26
Consensus pattern (52 bp):
TCATATACTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGAT
Found at i:20990786 original size:102 final size:103
Alignment explanation
Indices: 20990564--20990855 Score: 426
Period size: 102 Copynumber: 2.8 Consensus size: 103
20990554 GTATTGGGAA
* * ** * * *
20990564 TCATATACTCACGATTATGCATAGCCATCGAACCTCATAATCCGTAAAGGATTCATATACTC-TC
1 TCATATGCTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGATTCATATACTCAT-
*
20990628 GATGACACATAGTCATCGAACCACATAATCCATAAAGGAT
65 GATG-CACATAGTCATCGGACCACATAATCCATAAAGGAT
* *
20990668 TCATATGCTCACGATGACATATAGTCATCGGACCACATAATCCATAAAGGATTCATATACTCATG
1 TCATATGCTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGATTCATATACTCATG
*
20990733 ATG-ACATAGTCATCGGACCACATAATCCGTAAAGGAT
66 ATGCACATAGTCATCGGACCACATAATCCATAAAGGAT
* *
20990770 TCATATGCTCATGATGACACATAGTCATCGGACCACGTAATCCGTAAAGGATTCATATACTCATG
1 TCATATGCTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGATTCATATACTCATG
20990835 ATGTCACATAGTCATCGGACC
66 ATG-CACATAGTCATCGGACC
20990856 TATTTCATTT
Statistics
Matches: 170, Mismatches: 15, Indels: 6
0.89 0.08 0.03
Matches are distributed among these distances:
102 96 0.56
104 73 0.43
105 1 0.01
ACGTcount: A:0.35, C:0.24, G:0.15, T:0.26
Consensus pattern (103 bp):
TCATATGCTCACGATGACACATAGTCATCGGACCACATAATCCGTAAAGGATTCATATACTCATG
ATGCACATAGTCATCGGACCACATAATCCATAAAGGAT
Found at i:20990805 original size:154 final size:155
Alignment explanation
Indices: 20990564--20990855 Score: 435
Period size: 154 Copynumber: 1.9 Consensus size: 155
20990554 GTATTGGGAA
* *
20990564 TCATATACTCACGATTATGCATAGCCATCGAACCTCATAATCCGTAAAGGATTCATATACTCTCG
1 TCATATACTCACGATGA-GCATAGCCATCGAACCACATAATCCGTAAAGGATTCATATACTCTCG
* *
20990629 ATGACACATAGTCATCGAACCACATAATCCATAAAGGATTCATATGCTCACGATGACATATAGTC
65 ATGACACATAGTCATCGAACCACATAATCCATAAAGGATTCATATACTCACGATGACACATAGTC
20990694 ATCGGACCACATAATCCATAAAGGAT
130 ATCGGACCACATAATCCATAAAGGAT
* * * *
20990720 TCATATACTCATGATGA-CATAGTCATCGGACCACATAATCCGTAAAGGATTCATATGCTCAT-G
1 TCATATACTCACGATGAGCATAGCCATCGAACCACATAATCCGTAAAGGATTCATATACTC-TCG
* * * * *
20990783 ATGACACATAGTCATCGGACCACGTAATCCGTAAAGGATTCATATACTCATGATGTCACATAGTC
65 ATGACACATAGTCATCGAACCACATAATCCATAAAGGATTCATATACTCACGATGACACATAGTC
20990848 ATCGGACC
130 ATCGGACC
20990856 TATTTCATTT
Statistics
Matches: 122, Mismatches: 13, Indels: 4
0.88 0.09 0.03
Matches are distributed among these distances:
154 106 0.87
155 1 0.01
156 15 0.12
ACGTcount: A:0.35, C:0.24, G:0.15, T:0.26
Consensus pattern (155 bp):
TCATATACTCACGATGAGCATAGCCATCGAACCACATAATCCGTAAAGGATTCATATACTCTCGA
TGACACATAGTCATCGAACCACATAATCCATAAAGGATTCATATACTCACGATGACACATAGTCA
TCGGACCACATAATCCATAAAGGAT
Found at i:20994417 original size:20 final size:20
Alignment explanation
Indices: 20994392--20994440 Score: 98
Period size: 20 Copynumber: 2.5 Consensus size: 20
20994382 TATAGAGATT
20994392 GACCCATGACGGAGGAAATG
1 GACCCATGACGGAGGAAATG
20994412 GACCCATGACGGAGGAAATG
1 GACCCATGACGGAGGAAATG
20994432 GACCCATGA
1 GACCCATGA
20994441 AATCCAGACC
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
20 29 1.00
ACGTcount: A:0.35, C:0.22, G:0.33, T:0.10
Consensus pattern (20 bp):
GACCCATGACGGAGGAAATG
Found at i:20997021 original size:17 final size:17
Alignment explanation
Indices: 20996991--20997031 Score: 50
Period size: 17 Copynumber: 2.4 Consensus size: 17
20996981 AAAATAAAAT
20996991 GAATGCAACAACAATTAA
1 GAATGCAACAACAA-TAA
20997009 -AATGCAAGC-ACAATAA
1 GAATGCAA-CAACAATAA
20997025 GAATGCA
1 GAATGCA
20997032 TGGAAACTAA
Statistics
Matches: 21, Mismatches: 0, Indels: 5
0.81 0.00 0.19
Matches are distributed among these distances:
16 3 0.14
17 17 0.81
18 1 0.05
ACGTcount: A:0.54, C:0.17, G:0.15, T:0.15
Consensus pattern (17 bp):
GAATGCAACAACAATAA
Found at i:20997469 original size:18 final size:18
Alignment explanation
Indices: 20997443--20997483 Score: 55
Period size: 18 Copynumber: 2.3 Consensus size: 18
20997433 TCTCAGCAGG
* *
20997443 TTCTGCTTTTTCTTTCTC
1 TTCTTCTTTCTCTTTCTC
20997461 TTCTTCTTTCTCTTTCTC
1 TTCTTCTTTCTCTTTCTC
*
20997479 GTCTT
1 TTCTT
20997484 GATCTTTCTC
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
18 20 1.00
ACGTcount: A:0.00, C:0.29, G:0.05, T:0.66
Consensus pattern (18 bp):
TTCTTCTTTCTCTTTCTC
Found at i:21002695 original size:19 final size:18
Alignment explanation
Indices: 21002673--21002709 Score: 56
Period size: 19 Copynumber: 2.0 Consensus size: 18
21002663 ATCAAAAAGT
21002673 CGAGAAAAAAAGAAAAATA
1 CGAGAAAAAAA-AAAAATA
*
21002692 CGAGAAAATAAAAAAATA
1 CGAGAAAAAAAAAAAATA
21002710 AAAAAAATAT
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
18 7 0.41
19 10 0.59
ACGTcount: A:0.73, C:0.05, G:0.14, T:0.08
Consensus pattern (18 bp):
CGAGAAAAAAAAAAAATA
Found at i:21002699 original size:18 final size:19
Alignment explanation
Indices: 21002673--21002709 Score: 51
Period size: 18 Copynumber: 2.0 Consensus size: 19
21002663 ATCAAAAAGT
21002673 CGAGAAAAA-AAGAAAAATA
1 CGAGAAAAATAA-AAAAATA
21002692 CGAG-AAAATAAAAAAATA
1 CGAGAAAAATAAAAAAATA
21002710 AAAAAAATAT
Statistics
Matches: 17, Mismatches: 0, Indels: 3
0.85 0.00 0.15
Matches are distributed among these distances:
18 11 0.65
19 6 0.35
ACGTcount: A:0.73, C:0.05, G:0.14, T:0.08
Consensus pattern (19 bp):
CGAGAAAAATAAAAAAATA
Found at i:21017735 original size:18 final size:19
Alignment explanation
Indices: 21017690--21017735 Score: 69
Period size: 18 Copynumber: 2.5 Consensus size: 19
21017680 AGCATGATAT
*
21017690 CTTCAACTT-TCCTTTTCT
1 CTTCAACTTCTCCTTTTCA
21017708 CTTCAACTTCT-CTTTTCA
1 CTTCAACTTCTCCTTTTCA
21017726 CTTCAACTTC
1 CTTCAACTTC
21017736 CAGATCTGAA
Statistics
Matches: 26, Mismatches: 1, Indels: 2
0.90 0.03 0.07
Matches are distributed among these distances:
18 25 0.96
19 1 0.04
ACGTcount: A:0.15, C:0.35, G:0.00, T:0.50
Consensus pattern (19 bp):
CTTCAACTTCTCCTTTTCA
Found at i:21019244 original size:27 final size:27
Alignment explanation
Indices: 21019194--21019252 Score: 84
Period size: 27 Copynumber: 2.2 Consensus size: 27
21019184 GCCTATTCAT
*
21019194 AAAACTAAAACAAAATCTACAATAACA
1 AAAACTAAAACAAAATCTAAAATAACA
*
21019221 AAAACTAAAACAAAAT-TAAAAATAATA
1 AAAACTAAAACAAAATCT-AAAATAACA
21019248 AAAAC
1 AAAAC
21019253 AAATGTTAGC
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
26 1 0.03
27 28 0.97
ACGTcount: A:0.71, C:0.14, G:0.00, T:0.15
Consensus pattern (27 bp):
AAAACTAAAACAAAATCTAAAATAACA
Found at i:21023348 original size:14 final size:14
Alignment explanation
Indices: 21023329--21023356 Score: 56
Period size: 14 Copynumber: 2.0 Consensus size: 14
21023319 AACAATTAAT
21023329 ATAAATAAATATAA
1 ATAAATAAATATAA
21023343 ATAAATAAATATAA
1 ATAAATAAATATAA
21023357 CTGGTGAATA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 14 1.00
ACGTcount: A:0.71, C:0.00, G:0.00, T:0.29
Consensus pattern (14 bp):
ATAAATAAATATAA
Found at i:21025561 original size:26 final size:26
Alignment explanation
Indices: 21025524--21025579 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
21025514 TGTGTCATAC
* *
21025524 AACTCTACTATATTTAGTAGAAGAAT
1 AACTCTAATATATCTAGTAGAAGAAT
21025550 AACTCTAATATATCTAGTAGAAGAAT
1 AACTCTAATATATCTAGTAGAAGAAT
21025576 AACT
1 AACT
21025580 GAGTCAAGGT
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.45, C:0.12, G:0.11, T:0.32
Consensus pattern (26 bp):
AACTCTAATATATCTAGTAGAAGAAT
Found at i:21025959 original size:22 final size:22
Alignment explanation
Indices: 21025934--21025977 Score: 70
Period size: 22 Copynumber: 2.0 Consensus size: 22
21025924 AGCAACGAGG
*
21025934 TATGTATTTTATGTTATTCTGT
1 TATGTATCTTATGTTATTCTGT
*
21025956 TATGTATCTTATTTTATTCTGT
1 TATGTATCTTATGTTATTCTGT
21025978 CTTTTTTTTT
Statistics
Matches: 20, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
22 20 1.00
ACGTcount: A:0.18, C:0.07, G:0.11, T:0.64
Consensus pattern (22 bp):
TATGTATCTTATGTTATTCTGT
Found at i:21032493 original size:17 final size:17
Alignment explanation
Indices: 21032471--21032503 Score: 66
Period size: 17 Copynumber: 1.9 Consensus size: 17
21032461 TAAAAATGAT
21032471 GAAAAATTAGATAAAGA
1 GAAAAATTAGATAAAGA
21032488 GAAAAATTAGATAAAG
1 GAAAAATTAGATAAAG
21032504 GGTTAAAATA
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 16 1.00
ACGTcount: A:0.64, C:0.00, G:0.18, T:0.18
Consensus pattern (17 bp):
GAAAAATTAGATAAAGA
Found at i:21038900 original size:13 final size:14
Alignment explanation
Indices: 21038847--21038901 Score: 62
Period size: 14 Copynumber: 4.1 Consensus size: 14
21038837 ATCGAATTCA
*
21038847 ACCATTGACTATTG
1 ACCATTGACTGTTG
* *
21038861 AGCATTGACCGTTG
1 ACCATTGACTGTTG
21038875 A--ATTGACTGTTG
1 ACCATTGACTGTTG
21038887 ACCATTGA-TGTTG
1 ACCATTGACTGTTG
21038900 AC
1 AC
21038902 TTGATCGTTG
Statistics
Matches: 35, Mismatches: 4, Indels: 5
0.80 0.09 0.11
Matches are distributed among these distances:
12 11 0.31
13 7 0.20
14 17 0.49
ACGTcount: A:0.25, C:0.18, G:0.22, T:0.35
Consensus pattern (14 bp):
ACCATTGACTGTTG
Found at i:21042133 original size:26 final size:25
Alignment explanation
Indices: 21042071--21042133 Score: 58
Period size: 24 Copynumber: 2.4 Consensus size: 25
21042061 ACCATTCATT
*
21042071 TTCTATAATTTGCTCTGACATTTGACA
1 TTCT-TAA-TTGCGCTGACATTTGACA
*
21042098 TTC-TAATTGCGCTGACATATTTAC-
1 TTCTTAATTGCGCTGACAT-TTGACA
21042122 TTCTTAACTTGC
1 TTCTTAA-TTGC
21042134 ATAACTTTAA
Statistics
Matches: 31, Mismatches: 2, Indels: 7
0.77 0.05 0.17
Matches are distributed among these distances:
24 14 0.45
25 10 0.32
26 4 0.13
27 3 0.10
ACGTcount: A:0.24, C:0.21, G:0.11, T:0.44
Consensus pattern (25 bp):
TTCTTAATTGCGCTGACATTTGACA
Found at i:21058093 original size:20 final size:20
Alignment explanation
Indices: 21058057--21058107 Score: 52
Period size: 20 Copynumber: 2.5 Consensus size: 20
21058047 TCATTTAGCT
*
21058057 TTAATTAAACTTTTTTA-ATC
1 TTAATTAAACTTATTTACA-C
21058077 TTAATTAAA-TCTATTTACAC
1 TTAATTAAACT-TATTTACAC
21058097 TTAATATAAAC
1 TTAAT-TAAAC
21058108 CATGCCAATC
Statistics
Matches: 26, Mismatches: 1, Indels: 6
0.79 0.03 0.18
Matches are distributed among these distances:
19 1 0.04
20 20 0.77
21 5 0.19
ACGTcount: A:0.41, C:0.12, G:0.00, T:0.47
Consensus pattern (20 bp):
TTAATTAAACTTATTTACAC
Found at i:21064227 original size:20 final size:19
Alignment explanation
Indices: 21064192--21064241 Score: 57
Period size: 20 Copynumber: 2.5 Consensus size: 19
21064182 TTATTAAGCT
*
21064192 TTAATTAAACTTTTTA-ATC
1 TTAATTAAACTATTTACA-C
21064211 TTAATTAAATCTATTTACAC
1 TTAATTAAA-CTATTTACAC
21064231 TTAATATAAAC
1 TTAAT-TAAAC
21064242 CATGCCAATC
Statistics
Matches: 27, Mismatches: 1, Indels: 5
0.82 0.03 0.15
Matches are distributed among these distances:
19 9 0.33
20 13 0.48
21 5 0.19
ACGTcount: A:0.42, C:0.12, G:0.00, T:0.46
Consensus pattern (19 bp):
TTAATTAAACTATTTACAC
Found at i:21066607 original size:18 final size:18
Alignment explanation
Indices: 21066573--21066618 Score: 51
Period size: 18 Copynumber: 2.6 Consensus size: 18
21066563 CGTATAAAAA
*
21066573 AAAGAAGAAA-AAGAAAGC
1 AAAGAA-AAATAAAAAAGC
*
21066591 AAAGAAAAATAAAAAAGT
1 AAAGAAAAATAAAAAAGC
21066609 AAA-AAAAATA
1 AAAGAAAAATA
21066619 TATTGCTATA
Statistics
Matches: 25, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
17 10 0.40
18 15 0.60
ACGTcount: A:0.78, C:0.02, G:0.13, T:0.07
Consensus pattern (18 bp):
AAAGAAAAATAAAAAAGC
Found at i:21068739 original size:213 final size:212
Alignment explanation
Indices: 21068347--21078582 Score: 9496
Period size: 214 Copynumber: 47.4 Consensus size: 212
21068337 TGCATCAACC
* * * *
21068347 AAACTTGTTTACAAAATGACAAA-TAATTTAGA-AAAATGATGTGATTTCCCGAGCATAGAATTT
1 AAACTTGTTTACAAAATGACAAACT-ATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * * **
21068410 TTAGAAAGTTGCTCGAAGGAATGTATTGTCTTGAATACTAAAAGGAACCGAAGTTATAAAAGAAC
65 TCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAAC
* *
21068475 TCATAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACATAAATA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
*
21068540 AGTATTTAATTCAAAGACCA
193 AGTTTTTAATTCAAAGACCA
*
21068560 AAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
*
21068625 CGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCAAGTTATAAAAGAACTC
66 C-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAGTTATAAAAGAACTC
* * * * *
21068690 GTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAACAGCCAAGATAAACAATTCTCACGTAAATAAG
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAG
** *
21068755 TTTTTGTTTTAAAGACCA
195 TTTTTAATTCAAAGACCA
* * *
21068773 AAACTTGTTTACAAAATGAAAAACTATTTAGACTAAATGATGCGATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * *
21068838 CAAAAATTGCTCAAAGGAATGGATTGTCTTAAATACCTTAAGGAACCGAAGTTATAAAAGAACTC
66 CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACTC
* * * * *
21068903 GTAAAAGTTTGAAAAGTTTGGAAGTTCGTCCAAGAAACAAGAGAGAGAAACAATTCTCACATAAA
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAG-AAC--CA-AGAGAAACAATTCTCACGTAAA
* * *
21068968 TAAGTTTTTAATTTAATGACCG
191 TAAGTTTTTAATTCAAAGACCA
* * * * ** * *
21068990 AAACTAGTTTACAAAATGACAAACAATTTAGA-AAAATGATGTGATTTTTCAAGCATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21069054 TAGAAAGTTGCTCAAAGGAATGTATCGTCTTGAATACTGTAAGGAACCAAAGTTATAAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACT
* * * * *
21069119 CATAAAAGTTTGACAAGTTC-AGAAGTCCATCCAAGAGCCAAGAGAATCAATTCTCACGTAAATA
129 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
*
21069183 AGTTTTTTATTCAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * * * *
21069203 AAACTTGTTTTCAAAATGACAAACTATTTAGACCAAATGCTGCTATTTCCCGAGAATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* *
21069268 CAGAAAATTGCTCGAAGGAATGGATCATCTTGAATACTTTAAGGAACCGAAGTTATGAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACT
* *
21069333 CGTAAAAGTTTGACTAGTTCGAAAGTTCATCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAT
129 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAAT
* * *
21069398 AAGTTTTAAATTCAAAAAACA
192 AAGTTTTTAATTCAAAGACCA
* *
21069419 AAATCTT-TTTACAAAATGACAAACTATTTAGACAAAATGATAG-GATTTCCCGAACATGGAATG
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGAT-GCGATTTCCCGAGCATGGAATG
* * * * *
21069482 TTTAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTATGAAACTAAAATTATAAAAGAA
64 -TTCAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC-CAAGTTATAAAAGAA
* * *
21069547 CTCGTAAAAGTTTGAAAAGTTCGAAAGTTCGTCCAAGAACCAAAAGAGAAACAATTCACATGTAA
127 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC--AAGAGAAACAATTCTCACGTAA
*
21069612 ATAAGTATTTAATTCAAAGACCA
190 ATAAGTTTTTAATTCAAAGACCA
* * * *
21069635 AAAGTTGTTTACAAAATGACAAACTATTTAAACCAAATGATACGATTTCTCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21069700 CAGAAAATTGCTCAAAGGAATGGATCATCTTGAATACTGTAAGGAACTAAGTTGTAAAAGAACTC
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAGTTATAAAAGAACTC
* * * * *
21069765 GTAAAAGTTTGAAAAGTTCGAAAGTTCGTCCAACAGCCAAGAAAAATAATTCTCACGTAAATAAG
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAG
*
21069830 TTTTTGTATT-AAAGTA-CA
195 TTTTT-AATTCAAAG-ACCA
* * * * * *
21069848 AAA-TTGTATACAAAACGAAAAACTATTTAGACTAAATGATGTGATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* *
21069912 CAAAAATTGCTCAAAGGAATGGATCGTCTTGAATACATTAAGGAACCGAAGTTATAAAAGAACTC
66 CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACTC
* * * * * *
21069977 GTAAAAGTTTGAAAAGATT-GGAACTTCATCCAAGAACCAAGAGAAAAAATTCTCACGTATATAA
130 GTAAAAGTTTGACAAG-TTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAA
*
21070041 GTTTTTAATTTAAAGACCA
194 GTTTTTAATTCAAAGACCA
* * * * *** * *
21070060 AAACATGTTTACAAAATGACAATCAATTTAGA-AAAATGATGCGATTTTTTGAGCATAGAATTTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21070124 CAGAAAGTTGCTCGAAGGAATGTATCGTCTAGAATACTGTAAGGAACCGAAGTTATACAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACT
* * *
21070189 CGTAAAATTTTGACAAGTTCGGAAGTTCGT-CAAGAACCACGAGAGAAAAAATTCTCACGTAAAT
129 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCA--AGAGAAACAATTCTCACGTAAAT
* *
21070253 AAGTTCTTTTAATTCAAACACAA
192 AAG-T-TTTTAATTCAAAGACCA
* * * ** *
21070276 AAATTTGTTTACAAAATAACAAACTATTTAATTCAAAGACCAAAACAGA-AAGAGTTCCAACGTA
1 AAACTTGTTTACAAAATGACAAACTA--T--TT---AGACC-AAA-TGATGCGATTTCC--CG-A
* * * * * * *** **** * *
21070340 -AAT--AAGTATTTAATTCAAA--GAC-CAAAAG-TTTTTTACAAAATGACAAACTATTTA-G-A
54 GCATGGAA-TGTTCAA---AAATTG-CTCGAAGGAATGGAT-CGTCTTGA-ATACT-TTAAGGAA
* * * *** *** * * * *
21070396 CTAAATGATGCGATTTCTCG-AGCATGGAATGTTCTTGAAAATTGCTCTTAGGAATGGATCGTCT
111 CCAAGTTATAAAAGAACTCGTA--A---AA-G-T-TTGACAA--G---TT-CGAA-AGTTCGTC-
* * * * * * ** *
21070460 TGAA-TACTGTAAG-GAATCAAGTTATAAAAGAACGCGT-AA-AAGTTTGAAAAGTTCGGAAGTT
160 -CAAGAAC--CAAGAGAAACAA-TTCT-------CACGTAAATAAGTTT-TTAA-TTC-AAAG--
21070521 CATCCA
209 -A-CCA
* *** ** * * * * *** * * * * * *
21070527 ACAACCTAGAGAAGCAATCCTCACGTAAGTAAGTTTTCGTTTTACA-GA-CCAAAACTTGCCTA-
1 A-AA-CTTGTTTA-CAA-AATGAC-AAACT-A--TTTAG-ACCAAATGATGC--GATTTCCCGAG
* * * * * ** ** * **
21070589 CA--AAATG--AAAAACTATTAAGACT-AAATG-ATGCGAT-TTCCCGAGA-A-TGGAATGTTCA
55 CATGGAATGTTCAAAA--ATT--G-CTCGAAGGAATG-GATCGTCTTGA-ATACTTTAAGGAAC-
* * * * * * * * * * * **
21070645 AAAATTGCTCAAAAGAATGGATCGTCTTGAATACTTTAAGAA-ATCG-AAGAT-ATAAAAGAACT
112 CAAGTT-AT-AAAAG-A---A-C-TCGT-AAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAAC-
* * * ***** * *
21070707 CGTAAAAGTTTGAAAAGTTTGGAAGTTCGTC-CAATAACCA-AGAGAGAAACAATTCTCACGTA-
167 C----AAG--AG-AAA-----CAA-TTC-TCAC-GTAA--ATA-AG-TTTTTAATTC-AAAG-AC
21070769 -A
211 CA
* * * **
21070770 ATAAGTT-TTTA-ATTTAAA-GACCAAAACCTGTTTACAAAATGACAAACAATTTAAAGAAATGA
1 A-AACTTGTTTACA---AAATGA-C-AAA-CTATTT---AGA-CC--------------AAATGA
** * * * * * * * *
21070832 TGCGATTTTTCGAGCATAGAATTTTTAAAAAGTTGCTCGGAGGAATGCATCATCTTGATTACTGT
41 TGCGATTTCCCGAGCATGGAATGTTCAAAAA-TTGCTCGAAGGAATGGATCGTCTTGAATACTTT
*
21070897 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGATCAGAAA-TTCGTCCAAGAACC
105 AAGGAACC-AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC-GAAAGTTCGTCCAAGAACC
* * *
21070961 AAGAGAAACAATTCACACGTAAAAAAGTATTTAATTCAAAGACCA
168 AAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21071006 AAAGTTGTTTACAAAATGAAAAACTATTTAAACCAAATGAAGTGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * *
21071071 CAAAAAATTTCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCAAGTTGTAAAAGAACTC
66 C-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAGTTATAAAAGAACTC
* * *
21071136 GTAAAAGTTTGAAAAGTTCGAAAGTTCGTCCAACAGCCAAGAGAAACAATTCTCACGTAAATAAG
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAG
*** *
21071201 TTTTCGTTTTAAAGACCA
195 TTTTTAATTCAAAGACCA
* * * * * * *
21071219 AAACTTGTTTACAAAATAAAAAACTATTTAGACTAAATGATGCTATTTCTCGAGAATGGAATTTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * **
21071284 CAAAAACTACTCAAAAGAATGGATTATCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTC
66 CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACTC
* * * * * * * *
21071349 GTAAAAGTTTCAAAAGTTTGGATGTTTGTCCAAGAATCAAGAGAGAAACAATTTTCACGTAAATA
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CCA-AGAGAAACAATTCTCACGTAAATA
*
21071414 AGTTTTTAATTTAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * * ** * **
21071434 AAACTTGTTTACAAAATGAAAAACAATTTAGA-AAAATGATGCGATTTTTCGAGAAAAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * *
21071498 TAGAAAGTTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACT
** * * *
21071563 CAAAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGGGAAACAATTCTCACGTAAATAA
129 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAA
* *
21071628 GTTTTTGACTCAAAGACCA
194 GTTTTTAATTCAAAGACCA
* ** * * * **
21071647 AAACTTGTTTCCAAAATGA-AGAACTATTTAGACCAAATCCTACTATTTCCCAATAATGGAATGT
1 AAACTTGTTTACAAAATGACA-AACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATG-
* * * * *
21071711 TTAAAAAATTGCTCGAAGGAATGGATAGTCTTGAATACTATAAGGAACCGAACTTATGAAAGAAC
64 TTCAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAAC
* *
21071776 TTGTAAAAGTTTGACAAGTTCGAAAGTTCGTCTAAGAACCAAGAGAGAAACAATTCTCACGTAAA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAA
* * *
21071841 TAAGTTTTAAATTCAAACAACA
191 TAAGTTTTTAATTCAAAGACCA
* * * * *
21071863 AAACTTTTTTATAAAATTAC-AACTATTTAGACCAAATGACGCGATTTCCCGAGCATGTAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
** *
21071927 CGAAAAATTGCTCGAAGGAATGGATCACCTTGAATACTTTAAGGAACAGAAGTTATAAAAGAACT
66 C-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC-CAAGTTATAAAAGAACT
* *
21071992 CGTAAAATTTTGACAAGTTC-AGAAGTTCGT-CAAGAACCACGAGAGAAAAAATTCTCACGTAAA
129 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCA--AGAGAAACAATTCTCACGTAAA
* *
21072055 TAAGTTCTTTTAATTCAAACACAA
191 TAAG-T-TTTTAATTCAAAGACCA
* * * *
21072079 AAATTTGTTTACAAAATAACAAACTATTTTGACCAAATGATGTGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATG-T
* * * * *
21072144 TGAAAAATTGCCCAAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAATAACT
65 TCAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACT
* *
21072209 CGCAAAAG-TT--C--G---G-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCATGTAAA-
129 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAAT
*
21072264 AAGTTCTTTTAATTCAAACA-CA
192 AAG-T-TTTTAATTCAAAGACCA
* * * * ***
21072286 AAAGCTTGTCTACAAAATTACAAACTATTTATACCAAATGATGCGATATCCCGAATGTGGAATGT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * * * *
21072351 TCAGAAAATTGCTCGAAGGAGTGGATTGTCTTGAATACTTTAAGGAACCGTAGTTGTAAAACAAG
65 TCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAAC
* *
21072416 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAA-AGGAGAACAATCCTCATGTAAA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGA-GA-AACAATTCTCACGTAAA
* ** *
21072480 T-AGGTGCT--TTGAAAGACCA
191 TAAGTTTTTAATTCAAAGACCA
* * * * *
21072499 AAAGC-TGTTTACAAAATGAAAAACTATTTAGACCAATTGATGTGATTTCCAGAGCATGGAATTT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * *
21072563 TCAGAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTGTAGGGAACCAAGTTATAAAAGAACT
65 TCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAGTTATAAAAGAACT
* * *
21072628 CGTAAAAGTTTGA-AACGTTCTGAAA-TTCATCCAACAGCCAAGAGAAACAATTCTCACGTAAAT
129 CGTAAAAGTTTGACAA-GTTC-GAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAAT
*** *
21072691 AAGTTTTCGTTTTAAAGACCA
192 AAGTTTTTAATTCAAAGACCA
* * *
21072712 AAACTTGTTTACAAAATGAAAAACTATTTAGACCAAATGATGCGATTTCGCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * * *
21072777 CAAAAATTGCTCAAAGGAATGAATCGTCTTTAATACTTTAAGGAGCTGAAATTATAAAAGAACTC
66 CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC-CAAGTTATAAAAGAACTC
* * *
21072842 GTAAAACTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATA
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATA
*
21072907 AGTCTTTAATTCAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * * *
21072927 AAACTTGTTTACAAAATGACAAACAATTTAGATCAAATGATACGATTTCCCGAGCATGGAAAGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21072992 TAGAAAATTGCTCGAATGAAAGGATCATCTTGAATACTTTAAGGAATCGAAGTTATAAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAACT
* * * *
21073057 TGTAAAAGTTGGACAAGTTC-AGAAGTTCGTCCCAGAACCAAGGGAAACAATTCTCACGTAAATA
129 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
* *
21073121 AGTTTTTAATTCAAACAACA
193 AGTTTTTAATTCAAAGACCA
*
21073141 AAACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCCGAGCATGGAATGT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * * ** * *
21073205 TCGAAAAATTGTTCGAAGGAATGGATCGTCATGAATAGTTTATGGAATTGAAATTATAAAGGAAC
65 TC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAAC
* * *
21073270 TCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAAAGAGAAAACAATTCTCATGTAA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC--AAGAG-AAACAATTCTCACGTAA
* **
21073335 ATAAGTATTTAATTCAGTGACCA
190 ATAAGTTTTTAATTCAAAGACCA
* * * * * *
21073358 AAAGTTGTGTACAAAATGACAAACTATTTAGATCAATTGATGTGATTTCCCGAGCATGGAATGAT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * * * *
21073423 CGAAAAATTGCTTGAAAGAATAGATCATCATGAATACTCT-AGGAAACCGAAGTTATAAAACAAC
66 C-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG-AACC-AAGTTATAAAAGAAC
* **
21073487 TCGTAAAAGTTTGACAAGTTCAAAAGTTCGTAAAAGAACCAAGAGAGAAACAATTCTCACGT-AA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAA
* *
21073551 TAAGTGTTTAATCCAAAGACCGA
191 TAAGTTTTTAATTCAAAGACC-A
** * * * * * * * *
21073574 AAGTTTTTTTACAAAATGACACACTATTTATACCAAATGATTCCATTTCCCTAGGATGTAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * *
21073639 TAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTTTAAGGAACAGAAGTTATAAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC-CAAGTTATAAAAGAACT
* * * *
21073704 CGTAAAATTTTGACAAGTT-TAGAAGGTCGTCCAAGAACCAAGAGAAAATAATTCTCACGTAAAT
129 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAG-AAACAATTCTCACGTAAAT
*
21073768 AAGTTTTTAATTCAAACA-CA
192 AAGTTTTTAATTCAAAGACCA
* * * *
21073788 TAAATTTGTTTACAAAATAACAAACTATTTTGACCAAATGATGTGATTTCCCGAGCATGGAATGT
1 -AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * * *
21073853 TCGAAAAATTGCCCAAAAGAGTGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAATAAC
65 TC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAAC
* *
21073918 TCGCAAAAG-TT--C--G---G-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCATGTAAA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAA
* * *
21073974 AAAGTTCTTTTAATTCAAACACAA
191 TAAG-T-TTTTAATTCAAAGACCA
* * * * * * ***
21073998 AAACTTGTCTACAAAATTACAAACTCTTTATACCAAATGATGCGATATCCAGAATGTGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * * *
21074063 CAGAAAATTGCTCGAAGGAGTGGATTGTCTTGAATACTTTAAGGAACCGTAGTTGTAAAACAAGT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACT
* * *
21074128 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGGGAGAACAATCCTCATGTAAAT-
129 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGA-AACAATTCTCACGTAAATA
* ** *
21074192 AGGTGCT--TTGAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * * * *
21074210 AAAGC-TGTTTACAAAATGAAAAACTATTTAGACCAATTGATGTGATTTCCAGAGCATGGAATTT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * *
21074274 TCAGAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTGTAGGGAACCAAGTTATAAAAGAACT
65 TCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAGTTATAAAAGAACT
* * *
21074339 CGTAAAAGTTTGA-AACGTTCTGAAA-TTCATCCAACAGCCAAGAGAAACAATTCTCACGTAAAT
129 CGTAAAAGTTTGACAA-GTTC-GAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAAT
*** *
21074402 AAGTTTTCGTTTTAAAGACCA
192 AAGTTTTTAATTCAAAGACCA
* * *
21074423 AAACTTGTTTACAAAATGAAAAACTATTTAGACCAAATGATGCGATTTCTCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21074488 CAAAAATTGCTCAAAGGAATGAATCTTCTTGAATACTTTAAGGAGCCAAAATTATAAAAGAACTC
66 CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACTC
* * *
21074553 GTAAAACTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATA
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATA
* *
21074618 AGTCTTTAAATCAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* *
21074638 AAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGATACGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * * *
21074703 TAGAAAATTTCTCGAATGAAAGGATCATCTTGAATACTTTAAGGAATCGAAGTTATAAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAACT
* *
21074768 CGTAAAAGTTGGACAAGTTC-AGAAGTTCGTCCAAGAACCAAGGGAAACAATTCTCACGTAAATA
129 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
* *
21074832 AGTTTTTAATTCAAACAACA
193 AGTTTTTAATTCAAAGACCA
*
21074852 AAACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCCGAGCATGGAATGT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * ** *
21074916 TCGAAAAATTGTTCGAAGGAATGGATCGTCTTGAATAGTTTATGGAATTGAAATTATAAAAGAAC
65 TC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAAC
* *
21074981 TCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAAAGAGAAAACAATTCTCACGTAA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC--AAGAG-AAACAATTCTCACGTAA
* *
21075046 ATAAGTATTTAATTCAATGACCA
190 ATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21075069 AAAGTTATTTACAAAATGACAAACTATTTAGATCAATTGAGGTGATTTCCCGAGCATGGAATGAT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * * * *
21075134 CGAAAAATTGCTTGAAAGAATAGATCATCATGAATACTCT-AGGAAACCGAAGTTATAAAACAAC
66 C-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG-AACC-AAGTTATAAAAGAAC
* * **
21075198 TCGTAAAAGTTTGAAAAGTTCAAAAGTTCGTAAAAGAACCAAGAGAGAAACAATTCTCACGT-AA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAA
* *
21075262 TAAGTGTTTAATCCAAAGACCGA
191 TAAGTTTTTAATTCAAAGACC-A
** * * * * * * * *
21075285 AAGTTTTTTTACAAAATGACACACTATTTATACCAAATGATTCCATTTCCCTAGGATGTAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * *
21075350 TAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTTTAAGGAACAGAAGTTATAAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC-CAAGTTATAAAAGAACT
* * *
21075415 CGTAAAATTTTGACAAGTT-TAGAAGTTCGTCCAAGAACCAAGAGAAAATAATTCTCACGTAAAT
129 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAG-AAACAATTCTCACGTAAAT
*
21075479 AAGTTTTTAATTCAAACA-CA
192 AAGTTTTTAATTCAAAGACCA
* * * * *
21075499 TAAATTTGTTTACAAAATAAAAAACTATTTTGACCAAATGATGTGATTTCCCGAGCATGGAATGT
1 -AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * * *
21075564 TCGAAAAATTGCCCAAAAGAGTGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAATAAC
65 TC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAAC
* *
21075629 TCGCAAAAG-TT--C--G---G-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCATGTAAA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAA
* * *
21075685 AAAGTTCTTTTAATTCAAACACAA
191 TAAG-T-TTTTAATTCAAAGACCA
* * * ***
21075709 AAACTTGTCTACAAAATTACAAACTATTTATACCAAATGATGCGATATT-CCGAATGTGGAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGAT-TTCCCGAGCATGGAATGT
* * * * * * *
21075773 TCAGAAAATTGCTCGAAAGAGTGGATTGCCTTGAATACTTTAAGGAACCGTAGTTGTAAAAGAAG
65 TCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAAC
* * *
21075838 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGGGAGAACAATCCTCATGTAAAT
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGA-AACAATTCTCACGTAAAT
* ** *
21075903 -AGGTGCT--TTGAAAGACCA
192 AAGTTTTTAATTCAAAGACCA
* * * * *
21075921 AAAGC-TGTTTACAAAATGAAAAACTATTTAGACCAACTGATGTGATTTCCAGAGCATGGAATTT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * *
21075985 TCAGAAAATTGCTCGAAGGAATGAATCGCCTTGAATACTGTAGGGAACCAAGTTATAAAAGAACT
65 TCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAGTTATAAAAGAACT
* * *
21076050 CGTAAAAGTTTGA-AACGTTCTGAAA-TTCATCCAACAGCCAAGAGAAACAATTCTCACGTAAAT
129 CGTAAAAGTTTGACAA-GTTC-GAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAAT
*** *
21076113 AAGTTTTCGTTTTAAAGACCA
192 AAGTTTTTAATTCAAAGACCA
* * *
21076134 AAACTTGTTTACAAAATGAAAAACTATTTAGACCAAATGATGCGATTTCTCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21076199 CAAAAATTGTTCAAAGGAATGAATCGTCTTGAATACTTTAAGGACCCGAAATTATAAAAGAACTC
66 CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACTC
* * *
21076264 GTAAAACTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATA
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATA
* *
21076329 AGTCTTTAAATCAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * *
21076349 AAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGATACGATTTCCCGAGCATGGAAAGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21076414 TAGAAAATTGCTCGAATGAAAGGATCATCTTGAATACTTTAAGGAATCGAAGTTATAAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAACT
* * *
21076479 CATAAAAGTTGGACAAGTTC-AGAAGTTCGTCCAAGAACCAAGGGAAACAATTCTCACGTAAATA
129 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
* *
21076543 AGTTTTTAATTCAAACAACA
193 AGTTTTTAATTCAAAGACCA
*
21076563 AAACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCCGAGCATGGAATGT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * ** *
21076627 TCAAAAAATTGTTCGAAGGAATGGATCGTCTTGAATAGTTTATGGAATTGAAATTATAAAAGAAC
65 TC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAAC
* *
21076692 TCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAAAGAGAAAACAATTCTCACGTAA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC--AAGAG-AAACAATTCTCACGTAA
* *
21076757 ATAAGTATTTAATTCAATGACCA
190 ATAAGTTTTTAATTCAAAGACCA
* * * * * *
21076780 AAAGTTGTTTACAAAATGACAAACTATTTAGATCAATTGATGTGATTTCCCGATCATGGAATGAT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * * * *
21076845 CGAAAAATTGCTTGAAAGAATAGATCATCATGAATACTCT-AGGAAACCGAAGTTATAAAACAAC
66 C-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG-AACC-AAGTTATAAAAGAAC
**
21076909 TCGTAAAAGTTTGACAAGTTC-AGAAGTTCGTAAAAGAACCAAGAGAGAAACAATTCTCACGT-A
128 TCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAA
* * *
21076972 ATAAGTGTTTAATCCAAAGACCG
190 ATAAGTTTTTAATTCAAAGACCA
* * * * * * * * *
21076995 AAAGTTTTTTACAAAATGAC--ACTATTTATACTAAATGATTCCATTTCCCTAGGATGTAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * *
21077058 TAGAAATTTGCTCGAAGGAATGGATCCTCTTGAATA-TTGTAAGGAACCGAAGTTATAAAACAAC
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTT-TAAGGAACC-AAGTTATAAAAGAAC
* * *
21077122 TCGTAAAAGTTTGATAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
128 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
* **
21077187 AGTTTTTGACCCAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * * *
21077207 AAACTTGTTTAAAAAATGAAAAACTATTTAGACTAAATGATGCGATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * *
21077272 CAAAAATTTCTCTAAGGAATGGATCGTCTTGAATACTTTAAGGAATCGAAGTTATAAAACAACTC
66 CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAACTC
* * * * *
21077337 GTAAAATTTTGACAAGTTTGGAAGTTTGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAATA
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAAC-CA-AGAGAAACAATTCTCACGTAAATA
*
21077402 AGTTTTTGATTCAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * * * *
21077422 AAAGTTGTTTA-AAAGATGACAAACAATTTAGAGCTAATGACGCGATTTCCCGAGCATGGAATGT
1 AAACTTGTTTACAAA-ATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * *
21077486 TCAGAAAATTGCTCAAAGGAATGGATCGTCTTTAATACTTTAAGGAATCGAAGTTATAAAAGAAC
65 TCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAAC
* * * *
21077551 TCGTATAAGTTGGACAAGTTC-AGCAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAAC
128 TCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAAT
*** *
21077615 AAGTTTTGGTTTTAAAGACCA
192 AAGTTTTTAATTCAAAGACCA
* * * *
21077636 AAACTTGTTCACAAAACGAAAAACTATTTAGACTAAATGATGCGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21077701 CTGAAAATTGCTCGAAGTAATGGATCGCCTTGAATACTGTAAGGAACCAAGTCATAAAAGAACTC
66 C-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAGTTATAAAAGAACTC
* * * * *
21077766 GTAAAAGTTTGAAAAGTTCGGAAGTTCATCCAACAGCCAAGAGAAACAATTCTCACGTAAATAAG
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAG
* * *
21077831 TTTTCATTTTAAAGACCA
195 TTTTTAATTCAAAGACCA
* * * ** *
21077849 AAACTTGTTTAAAAAATGA-AAACTATTTAGACTAAATGATGCAATTTTACGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * *
21077913 CAAAAATTGCTCAAAGGAATGGATCGTCTTGAGTACTTTAAGGAACCGAAGTTATAAAACAACTC
66 CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACTC
* * *
21077978 GTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACAAAGAGAGATACAATTCTCACGTAAATA
130 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGA-A-ACAATTCTCACGTAAATA
21078043 AGTTTTTAATTCAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * *
21078063 AAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGATACGATTTCCTGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * *
21078128 TAGAAAATTGCTCGAATGAATGGATCGTCTTGAATACTTCAAGGAATCAAAGTTATAAAAGAACT
66 CA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAACT
* * * * *
21078193 CATAAAAGTTGGACAAGTTCGGAAGTTCATCTAAGAACCAAGAGAAACAATTCTCACGTAAATAA
129 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAA
* *
21078258 GTTTTTGATTTAAAGACCA
194 GTTTTTAATTCAAAGACCA
* * * * * * * *
21078277 AAACTTGTTTACAAGATGGCAATCCATTTAGACCAAATTATGTGATTTCCCGAGAATGTAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * * * * *
21078342 CAAAAAATTGATCAAAGGAGTCGATCATCTTGAATACTTTTAGGAATCGAAGTTATAAAAGAAGT
66 C-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-CCAAGTTATAAAAGAACT
* * * * *
21078407 CGTAATAGTTTAACAAGTTC-AGAAGTTCGTCCAACAACCAAGAGAAGCAATTCTCACGTAAAAA
129 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
* *
21078471 AGTTTTTGATTAAAAGACCA
193 AGTTTTTAATTCAAAGACCA
* * ** * * **
21078491 AAACTTGATTACAAAATGACAAACTATTTAGACAAAATGATAAGACTTCCCAATAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
** *
21078556 CAGAAAATTGCTTTAAGGAATGTATCG
66 CA-AAAATTGCTCGAAGGAATGGATCG
21078583 AAAGAGCTCG
Statistics
Matches: 8268, Mismatches: 1369, Indels: 771
0.79 0.13 0.07
Matches are distributed among these distances:
206 33 0.00
207 47 0.01
208 152 0.02
209 288 0.03
210 65 0.01
211 251 0.03
212 836 0.10
213 1330 0.16
214 1552 0.19
215 1135 0.14
216 1299 0.16
217 854 0.10
218 37 0.00
220 2 0.00
223 3 0.00
224 1 0.00
225 24 0.00
226 17 0.00
227 9 0.00
228 5 0.00
229 5 0.00
231 1 0.00
232 11 0.00
233 3 0.00
234 5 0.00
235 9 0.00
236 12 0.00
237 6 0.00
238 5 0.00
239 15 0.00
240 11 0.00
241 16 0.00
242 9 0.00
243 8 0.00
244 4 0.00
245 8 0.00
246 17 0.00
247 7 0.00
248 19 0.00
249 21 0.00
250 11 0.00
251 18 0.00
252 16 0.00
253 8 0.00
254 13 0.00
255 6 0.00
256 13 0.00
257 10 0.00
258 12 0.00
259 13 0.00
260 12 0.00
261 4 0.00
ACGTcount: A:0.41, C:0.15, G:0.17, T:0.27
Consensus pattern (212 bp):
AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
CAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAGTTATAAAAGAACTCG
TAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAGT
TTTTAATTCAAAGACCA
Found at i:21069160 original size:430 final size:430
Alignment explanation
Indices: 21068347--21108116 Score: 21799
Period size: 429 Copynumber: 92.9 Consensus size: 430
21068337 TGCATCAACC
* *
21068347 AAACTTGTTTACAAAATGACAAA-TAATTTAGA-AAAATGATGTGATTTCCCGAGCATAGAATTT
1 AAACTTGTTTACAAAATGACAAACT-ATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * * * **
21068410 TTAGAAAGTTGCTCGAAGGAATGTATTGTCTTGAATACTAAAAGGAACCGAAGTTATAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * *
21068475 TCATAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAAC-CA-AGAGAAACAATTCTCACATAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * *
21068538 TAAGTATTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGC
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* * *
21068603 GATTTCCCGAGCATGGAATG-TTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAA
260 GATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAA
* *
21068667 GGAACC-AAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAACAGCCAAG
324 GGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAG
* ** *
21068731 ATAAACAATTCTCACGTAAATAAGTTTTTGTTTTAAAGACCA
389 AGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
21068773 AAACTTGTTTACAAAATGAAAAACTATTTAGACTAAATGATGCGATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21068838 CA-AAAATTGCTCAAAGGAATGGATTGTCTTAAATACCT-TAAGGAACCGAAGTTATAAAAGAAC
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATA-CTGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21068901 TCGTAAAAGTTTGAAAAGTTTGGAAGTTCGTCCAAGAAACAAGAGAGAGAAACAATTCTCACATA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAG-AACAA-AGAGAGAAACAATTCTCACGTA
* * * * *
21068966 AATAAGTTTTTAATTTAATGACCGAAACTAGTTTACAAAATGACAAACAATTTAGA-AAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
** * * *
21069030 GTGATTTTTCAAGCATAGAATGTTTAGAAAGTTGCTCAAAGGAATGTATCGTCTTGAATACTGTA
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * *
21069095 AGGAACCAAAGTTATAAAAGAACTCATAAAAGTTTGACAAGTTC-AGAAGTCCATCCAAGAGCCA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAACCA
* *
21069159 AGAGAATCAATTCTCACGTAAATAAGTTTTTTATTCAAAGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21069203 AAACTTGTTTTCAAAATGACAAACTATTTAGACCAAATGCTGCTATTTCCCGAGAATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21069268 CAGAAAATTGCTCGAAGGAATGGATCATCTTGAATACTTTAAGGAACCGAAGTTATGAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * *
21069333 CGTAAAAGTTTGACTAGTTCGAAAGTTCATCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * *
21069398 AAGTTTTAAATTCAAAAAACAAAATCTT-TTTACAAAATGACAAACTATTTAGACAAAATGATAG
196 AAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT-G
* * *
21069462 -GATTTCCCGAA-CATGGAATGTTTAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTA
259 TGATTTCCC-AAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * * *
21069525 TGAAACTAAAATTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCGTCCAAGAACCAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC--
* * *
21069590 AAGAGAAACAATTCACATGTAAATAAGTATTTAATTCAAAGACCA
386 AAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
21069635 AAAGTTGTTTACAAAATGACAAACTATTTAAACCAAATGATACGATTTCTCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * *
21069700 CAGAAAATTGCTCAAAGGAATGGATCATCTTGAATACTGTAAGGAA-CTAAGTTGTAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * * *
21069764 CGTAAAAGTTTGAAAAGTTCGAAAGTTCGTCCAACAGCCAAGA-A-AAATAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * *
21069827 AAGTTTTTGTATT-AAAGTA-CAAAA-TTGTATACAAAACGAAAAACTATTTAGACTAAATGATG
196 AAGTTTTT-AATTCAAAG-ACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * *
21069889 TGATTTCCCGAGAATGGAATGTTCA-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACAT-TA
259 TGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATAC-TGTA
* * *
21069952 AGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGATT-GGAACTTCATCCAAGAACCA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAG-TTCGAAAGTTCATCCAAGAACCA
* * *
21070016 AGAGAAAAAATTCTCACGTATATAAGTTTTTAATTTAAAGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *** *
21070060 AAACATGTTTACAAAATGACAATCAATTTAGA-AAAATGATGCGATTTTTTGAGCATAGAATTTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * *
21070124 CAGAAAGTTGCTCGAAGGAATGTATCGTCTAGAATACTGTAAGGAACCGAAGTTATACAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * * *
21070189 CGTAAAATTTTGACAAGTTCGGAAGTTCGT-CAAGAACCACGAGAGAAAAAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * *
21070253 AAGTTCTTTTAATTCAAACACAAAAATTTGTTTACAAAATAACAAACTATTTAATTCAAAGACCA
196 AAG-T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTA--T--TT---AGA-CA
* ** * * * * * ** *
21070318 AAACAGA-AAGAGTT-CCAACGTAAATAAGTATTTAATTCAAAGACCAAAAGTTTTTTACAA--A
251 AAA-TGATGTGATTTCCCAA-G--CAT-GGAATGT--TT---AG---AAAA-TTGCTCA-AAGGA
* * * * * * * * * * * ** *
21070379 ATGACAAAC-TATTTAGACTAAATG-ATGCGATTTCTC-GAG-CATGGAATGTTCTTG-AAAATT
301 ATG--GATCGT-CTT-GAAT-ACTGTAAG-GA--AC-CAAAGTTAT-AAAAGAACTCGTAAAA--
* * * ** * ** *** *
21070439 GCTCTTAGGAATGGATCGTCTTG-AA-TAC-TGTAAGGAATCAAGTTATAA-AA-GAACGCGT-A
354 G-T-TT--GAA---A-AGT-TCGAAAGTTCATCCAA-GAACCAAGAGA-AACAATTCTCACGTAA
** *
21070498 A-AAGTTTGAAAAGTTCGGAAGTTCATCCA
408 ATAAGTTT-TTAA-TTC-AAAG---A-CCA
* *** ** * * * * *** * * * *
21070527 ACAACCTAGAGAAGCAATCCTCACGTAAGTAAGTTTTCGTTTTACA-GA-CCAAAACTTGCCTAC
1 A-AA-CTTGTTTA-CAA-AATGAC-AAACT-A--TTTAG-ACAAAATGATGC--GA-TTTCC--C
** * * * ** * *
21070590 -AAAATGAAAAACTATTAAGACTAAATGATGCGATTTCCCG-A-GAATGGAAT-GT-TCAAAAAT
52 GAGCAT--AGAA-TGTTCAGA--AAAT--TGC----T--CGAAGGAATGG-ATCGTCTTGAATAC
* ** * * * * * * *
21070650 TGCTCAAAAGAATGGATCGTCTTGAATACTTTAAGAAATCG-AAGA-TAT-AAAAGAACTCGTAA
103 TG-T--AAGGAACCGA-AG--TT--ATA---AAAGAACTCGTAAAAGTTTGACAAG--TTCG---
* *
21070712 AAGTTTGAAAAGTTTGGAAGTTCGTCCAATAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
152 AA----------------AGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * *
21070777 TTTAATTTAAAGACCAAAACCTGTTTACAAAATGACAAACAATTTA-A-AGAAATGATGCGATTT
201 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACA-AAATGATGTGATTT
** * * * ** * * *
21070840 TTCGAGCATAGAATTTTTA-AAAAGTTGCTCGGAGGAATGCATCATCTTGATTACTGTAAGGAAC
265 CCCAAGCATGGAATGTTTAGAAAA-TTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAGGAAC
* * *
21070904 CAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGATCAGAAA-TTCGTCCAAGAACCAAGAGAA
329 CAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTC-GAAAGTTCATCCAAGAACCAAGAGAA
* * *
21070968 ACAATTCACACGTAAAAAAGTATTTAATTCAAAGACCA
393 ACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21071006 AAAGTTGTTTACAAAATGAAAAACTATTTAAACCAAATGAAGTGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21071071 CAAAAAATTTCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACC-AAGTTGTAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * *
21071135 CGTAAAAGTTTGAAAAGTTCGAAAGTTCGTCCAACAGC-CA-AGAGAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
*** * * * *
21071198 AAGTTTTCGTTTTAAAGACCAAAACTTGTTTACAAAATAAAAAACTATTTAGACTAAATGATGCT
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG-T
* * * * * * ** *
21071263 -ATTTCTCGAGAATGGAAT-TTTCA-AAAACTACTCAAAAGAATGGATTATCTTGAATACTTTAA
260 GATTTCCCAAGCATGGAATGTTT-AGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAA
* * * * ** *
21071325 GGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTCAAAAGTTTGGATGTTTGTCCAAGAATCAAG
324 GGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAA-CCA-
* *
21071390 AGAGAAACAATTTTCACGTAAATAAGTTTTTAATTTAAAGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * ** * *
21071434 AAACTTGTTTACAAAATGAAAAACAATTTAGA-AAAATGATGCGATTTTTCGAGAAAAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* *
21071498 TAGAAAGTTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
** * * *
21071563 CAAAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAG-G-GAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * ** *
21071626 AAGTTTTTGACTCAAAGACCAAAACTTGTTTCCAAAATGA-AGAACTATTTAGACCAAATCCTAC
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACAAAATGAT-G
** * * * *
21071690 T-ATTTCCCAATAATGGAATGTTTAAAAAATTGCTCGAAGGAATGGATAGTCTTGAATACTATAA
259 TGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAA
* * * * * * *
21071754 GGAACCGAACTTATGAAAGAACTTGTAAAAGTTTGACAAGTTCGAAAGTTCGTCTAAGAACCAAG
324 GGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-A-
* * *
21071819 AGAGAAACAATTCTCACGTAAATAAGTTTTAAATTCAAACAACA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21071863 AAACTTTTTTATAAAATTAC-AACTATTTAGACCAAATGACGCGATTTCCCGAGCAT-GTAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
** * *
21071926 TC-GAAAAATTGCTCGAAGGAATGGATCACCTTGAATACTTTAAGGAACAGAAGTTATAAAAGAA
65 TCAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * * *
21071990 CTCGTAAAATTTTGACAAGTTC-AGAAGTTCGT-CAAGAACCACGAGAGAAAAAATTCTCACGTA
129 CTCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTA
* * * * * *
21072053 AATAAGTTCTTTTAATTCAAACACAAAAATTTGTTTACAAAATAACAAACTATTTTGACCAAATG
193 AATAAG-T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATG
* * *
21072118 ATGTGATTTCCCGAGCATGGAATGTTT-GAAAAATTGCCCAAAGGAGTGGATCGTCTTGAATACT
256 ATGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACT
* * * * * *
21072182 TTAAGGAACCGAAGTTATAAAATAACTC------G---CAAAAGTTCGGAAGTTCGTCCAAGAAC
320 GTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAAC
* *
21072238 CAAGAGAGAAACAATTCTCATGTAAA-AAGTTCTTTTAATTCAAACA-CA
385 C-A-AGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAAGACCA
* * * * * *** *
21072286 AAAGCTTGTCTACAAAATTACAAACTATTTATACCAAATGATGCGATATCCCGAATGTGGAATGT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * * * * * *
21072351 TCAGAAAATTGCTCGAAGGAGTGGATTGTCTTGAATACTTTAAGGAACCGTAGTTGTAAAACAAG
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* *
21072416 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAAG-GAG-AACAATCCTCATGTAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAGAAACAATTCTCACGTAA
* ** * * * *
21072479 AT-AGGTGCT--TTGAAAGACCAAAAGC-TGTTTACAAAATGAAAAACTATTTAGACCAATTGAT
194 ATAAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* *
21072540 GTGATTT-CCAGAGCATGGAAT-TTTCAGAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTG
258 GTGATTTCCCA-AGCATGGAATGTTT-AGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTG
* * * *
21072603 TAGGGAACC-AAGTTATAAAAGAACTCGTAAAAGTTTGAAACGTTCTGAAA-TTCATCCAACAGC
321 TAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTC-GAAAGTTCATCCAAGAAC
*** *
21072666 CAAGAGAAACAATTCTCACGTAAATAAGTTTTCGTTTTAAAGACCA
385 CAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21072712 AAACTTGTTTACAAAATGAAAAACTATTTAGACCAAATGATGCGATTTCGCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * * *
21072777 CA-AAAATTGCTCAAAGGAATGAATCGTCTTTAATACTTTAAGGAGCTGAAATTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * *
21072841 CGTAAAACTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * **
21072906 AAGTCTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGATC-AAATGATAC
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATGATGT
* * * * * * *
21072970 GATTTCCCGAGCATGGAAAGTTTAGAAAATTGCTCGAATGAAAGGATCATCTTGAATACTTTAAG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * * * * *
21073035 GAATCGAAGTTATAAAAGAACTTGTAAAAGTTGGACAAGTTC-AGAAGTTCGTCCCAGAACCAAG
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAACCAAG
* * *
21073099 GGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAACAACA
389 AGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
21073141 AAACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCCGAGCATGGAATGT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * * * * ** * *
21073205 TC-GAAAAATTGTTCGAAGGAATGGATCGTCATGAATAGTTTATGGAATTGAAATTATAAAGGAA
65 TCAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * *
21073269 CTCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAA-AGAGAAAACAATTCTCATGT
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAG-AAACAATTCTCACGT
* ** * * *
21073333 AAATAAGTATTTAATTCAGTGACCAAAAGTTGTGTACAAAATGACAAACTATTTAGATC-AATTG
192 AAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATG
* * * * * * *
21073397 ATGTGATTTCCCGAGCATGGAATG-ATCGAAAAATTGCTTGAAA-GAATAGATCATCATGAATAC
256 ATGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGC-TCAAAGGAATGGATCGTCTTGAATAC
* * * * * * **
21073460 TCT-AGGAAACCGAAGTTATAAAACAACTCGTAAAAGTTTGACAAGTTCAAAAGTTCGTAAAAGA
319 TGTAAGG-AACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGA
* *
21073524 ACCAAGAGAGAAACAATTCTCACGT-AATAAGTGTTTAATCCAAAGACCGA
383 ACC-A-AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-A
** * * * * * * * *
21073574 AAGTTTTTTTACAAAATGACACACTATTTATACCAAATGATTCCATTTCCCTAGGAT-GTAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
* * * *
21073638 TTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTTTAAGGAACAGAAGTTATAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * *
21073703 TCGTAAAATTTTGACAAGTT-TAGAAGGTCGTCCAAGAACCAAGAGA-AAATAATTCTCACGTAA
130 TCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * * *
21073766 ATAAGTTTTTAATTCAAACA-CATAAATTTGTTTACAAAATAACAAACTATTTTGACCAAATGAT
194 ATAAGTTTTTAATTCAAAGACCA-AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* * * * * *
21073830 GTGATTTCCCGAGCATGGAATG-TTCGAAAAATTGCCCAAAAGAGTGGATCGTCTTGAATACTTT
258 GTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * * * *
21073894 AAGGAACCGAAGTTATAAAATAACTC------G---CAAAAGTTCGGAAGTTCGTCCAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-
* * * *
21073950 AGAGAGAAACAATTCTCATGTAAAAAAGTTCTTTTAATTCAAACACAA
386 A-AGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAAGACCA
* * * * * * * *** *
21073998 AAACTTGTCTACAAAATTACAAACTCTTTATACCAAATGATGCGATATCCAGAATGTGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * * *
21074063 CAGAAAATTGCTCGAAGGAGTGGATTGTCTTGAATACTTTAAGGAACCGTAGTTGTAAAACAAGT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * *
21074128 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGGGAG-AACAATCCTCATGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* ** * * * *
21074192 -AGGTGCT--TTGAAAGACCAAAAGC-TGTTTACAAAATGAAAAACTATTTAGACCAATTGATGT
196 AAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* *
21074253 GATTT-CCAGAGCATGGAAT-TTTCAGAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTGTA
260 GATTTCCCA-AGCATGGAATGTTT-AGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * *
21074316 GGGAACC-AAGTTATAAAAGAACTCGTAAAAGTTTGAAACGTTCTGAAA-TTCATCCAACAGCCA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTC-GAAAGTTCATCCAAGAACCA
*** *
21074379 AGAGAAACAATTCTCACGTAAATAAGTTTTCGTTTTAAAGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21074423 AAACTTGTTTACAAAATGAAAAACTATTTAGACCAAATGATGCGATTTCTCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * * *
21074488 CA-AAAATTGCTCAAAGGAATGAATCTTCTTGAATACTTTAAGGAGCCAAAATTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * *
21074552 CGTAAAACTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * **
21074617 AAGTCTTTAAATCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGATACG
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGTG
* * * * * * *
21074682 ATTTCCCGAGCATGGAATGTTTAGAAAATTTCTCGAATGAAAGGATCATCTTGAATACTTTAAGG
261 ATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAGG
* * * * * *
21074747 AATCGAAGTTATAAAAGAACTCGTAAAAGTTGGACAAGTTC-AGAAGTTCGTCCAAGAACCAAGG
326 AACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAACCAAGA
* *
21074811 GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAACAACA
390 GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
21074852 AAACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCCGAGCATGGAATGT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * * * ** *
21074916 TC-GAAAAATTGTTCGAAGGAATGGATCGTCTTGAATAGTTTATGGAATTGAAATTATAAAAGAA
65 TCAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* *
21074980 CTCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAA-AGAGAAAACAATTCTCACGT
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAG-AAACAATTCTCACGT
* * * * *
21075044 AAATAAGTATTTAATTCAATGACCAAAAGTTATTTACAAAATGACAAACTATTTAGATC-AATTG
192 AAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATG
* * * * * * * *
21075108 AGGTGATTTCCCGAGCATGGAATG-ATCGAAAAATTGCTTGAAA-GAATAGATCATCATGAATAC
256 ATGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGC-TCAAAGGAATGGATCGTCTTGAATAC
* * * * * **
21075171 TCT-AGGAAACCGAAGTTATAAAACAACTCGTAAAAGTTTGAAAAGTTCAAAAGTTCGTAAAAGA
319 TGTAAGG-AACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGA
* *
21075235 ACCAAGAGAGAAACAATTCTCACGT-AATAAGTGTTTAATCCAAAGACCGA
383 ACC-A-AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-A
** * * * * * * * *
21075285 AAGTTTTTTTACAAAATGACACACTATTTATACCAAATGATTCCATTTCCCTAGGAT-GTAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
* * * *
21075349 TTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTTTAAGGAACAGAAGTTATAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21075414 TCGTAAAATTTTGACAAGTT-TAGAAGTTCGTCCAAGAACCAAGAGA-AAATAATTCTCACGTAA
130 TCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * * * *
21075477 ATAAGTTTTTAATTCAAACA-CATAAATTTGTTTACAAAATAAAAAACTATTTTGACCAAATGAT
194 ATAAGTTTTTAATTCAAAGACCA-AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* * * * * *
21075541 GTGATTTCCCGAGCATGGAATG-TTCGAAAAATTGCCCAAAAGAGTGGATCGTCTTGAATACTTT
258 GTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * * * *
21075605 AAGGAACCGAAGTTATAAAATAACTC------G---CAAAAGTTCGGAAGTTCGTCCAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-
* * * *
21075661 AGAGAGAAACAATTCTCATGTAAAAAAGTTCTTTTAATTCAAACACAA
386 A-AGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAAGACCA
* * * * *** *
21075709 AAACTTGTCTACAAAATTACAAACTATTTATACCAAATGATGCGATATT-CCGAATGTGGAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGAT-TTCCCGAGCATAGAATGT
* * * * * * * *
21075773 TCAGAAAATTGCTCGAAAGAGTGGATTGCCTTGAATACTTTAAGGAACCGTAGTTGTAAAAGAAG
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21075838 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGGGAG-AACAATCCTCATGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* ** * * * *
21075902 T-AGGTGCT--TTGAAAGACCAAAAGC-TGTTTACAAAATGAAAAACTATTTAGACCAACTGATG
195 TAAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * *
21075963 TGATTT-CCAGAGCATGGAAT-TTTCAGAAAATTGCTCGAAGGAATGAATCGCCTTGAATACTGT
259 TGATTTCCCA-AGCATGGAATGTTT-AGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * * *
21076026 AGGGAACC-AAGTTATAAAAGAACTCGTAAAAGTTTGAAACGTTCTGAAA-TTCATCCAACAGCC
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTC-GAAAGTTCATCCAAGAACC
*** *
21076089 AAGAGAAACAATTCTCACGTAAATAAGTTTTCGTTTTAAAGACCA
386 AAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21076134 AAACTTGTTTACAAAATGAAAAACTATTTAGACCAAATGATGCGATTTCTCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * *
21076199 CA-AAAATTGTTCAAAGGAATGAATCGTCTTGAATACTTTAAGGACCCGAAATTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * *
21076263 CGTAAAACTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * **
21076328 AAGTCTTTAAATCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGATACG
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGTG
* * * * * * *
21076393 ATTTCCCGAGCATGGAAAGTTTAGAAAATTGCTCGAATGAAAGGATCATCTTGAATACTTTAAGG
261 ATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAGG
* * * * * * *
21076458 AATCGAAGTTATAAAAGAACTCATAAAAGTTGGACAAGTTC-AGAAGTTCGTCCAAGAACCAAGG
326 AACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAACCAAGA
* *
21076522 GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAACAACA
390 GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
21076563 AAACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCCGAGCATGGAATGT
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * * * * ** *
21076627 TCAAAAAATTGTTCGAAGGAATGGATCGTCTTGAATAGTTTATGGAATTGAAATTATAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* *
21076692 TCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAA-AGAGAAAACAATTCTCACGTA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAG-AAACAATTCTCACGTA
* * * *
21076756 AATAAGTATTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGATC-AATTGA
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATGA
* * * * * * * *
21076820 TGTGATTTCCCGATCATGGAATG-ATCGAAAAATTGCTTGAAA-GAATAGATCATCATGAATACT
257 TGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGC-TCAAAGGAATGGATCGTCTTGAATACT
* * * * * **
21076883 CT-AGGAAACCGAAGTTATAAAACAACTCGTAAAAGTTTGACAAGTTC-AGAAGTTCGTAAAAGA
320 GTAAGG-AACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGA
* * *
21076946 ACCAAGAGAGAAACAATTCTCACGT-AATAAGTGTTTAATCCAAAGACCG
383 ACC-A-AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * *
21076995 AAAGTTTTTTACAAAATGAC--ACTATTTATACTAAATGATTCCATTTCCCTAGGAT-GTAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
* * * * *
21077057 TTAGAAATTTGCTCGAAGGAATGGATCCTCTTGAATATTGTAAGGAACCGAAGTTATAAAACAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21077122 TCGTAAAAGTTTGATAAGTTTGGAAGTTCGTCCAAGAAC-CA-AGAGAAACAATTCTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* ** * * * *
21077185 TAAGTTTTTGACCCAAAGACCAAAACTTGTTTAAAAAATGAAAAACTATTTAGACTAAATGATGC
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* * * * * *
21077250 GATTTCCCGAGAATGGAATGTTCA-AAAATTTCTCTAAGGAATGGATCGTCTTGAATACTTTAAG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * * * * * ** *
21077314 GAATCGAAGTTATAAAACAACTCGTAAAATTTTGACAAGTTTGGAAGTTTGTCCAAGAACAAAGA
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAAC-CA-A
*
21077379 GAGAAACAATTCTCACGTAAATAAGTTTTTGATTCAAAGACCA
388 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21077422 AAAGTTGTTTA-AAAGATGACAAACAATTTAGAGC-TAATGACGCGATTTCCCGAGCATGGAATG
1 AAACTTGTTTACAAA-ATGACAAACTATTTAGA-CAAAATGATGCGATTTCCCGAGCATAGAATG
* * * *
21077485 TTCAGAAAATTGCTCAAAGGAATGGATCGTCTTTAATACTTTAAGGAATCGAAGTTATAAAAGAA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * * *
21077550 CTCGTATAAGTTGGACAAGTTC-AGCAGTTCGTCCAAGAAC-CA-AGAGAAACAATTCTCACGTA
129 CTCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTA
* *** * * * * *
21077612 AACAAGTTTTGGTTTTAAAGACCAAAACTTGTTCACAAAACGAAAAACTATTTAGACTAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* * * * *
21077677 GCGATTTCCCGAGCATGGAATGTTCT-GAAAATTGCTCGAAGTAATGGATCGCCTTGAATACTGT
258 GTGATTTCCCAAGCATGGAATGTT-TAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * * *
21077741 AAGGAACC-AAGTCATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGGAAGTTCATCCAACAGCCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCA
* * *
21077805 AGAGAAACAATTCTCACGTAAATAAGTTTTCATTTTAAAGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * ** * *
21077849 AAACTTGTTTAAAAAATGA-AAACTATTTAGACTAAATGATGCAATTTTACGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * *
21077913 CA-AAAATTGCTCAAAGGAATGGATCGTCTTGAGTACTTTAAGGAACCGAAGTTATAAAACAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * *
21077977 CGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACAAAGAGAGATACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * **
21078042 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGATACG
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGTG
** * *
21078107 ATTTCCTGAGCATGGAATGTTTAGAAAATTGCTCGAATGAATGGATCGTCTTGAATACT-TCAAG
261 ATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT-AAG
* * * * * *
21078171 GAATCAAAGTTATAAAAGAACTCATAAAAGTTGGACAAGTTCGGAAGTTCATCTAAGAACCAAGA
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAGA
* *
21078236 GAAACAATTCTCACGTAAATAAGTTTTTGATTTAAAGACCA
390 GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * *
21078277 AAACTTGTTTACAAGATGGCAATCCATTTAGACCAAATTATGTGATTTCCCGAGAAT-GTAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
* * * * * * * * * *
21078341 TCAAAAAATTGATCAAAGGAGTCGATCATCTTGAATACTTTTAGGAATCGAAGTTATAAAAGAAG
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * *
21078406 TCGTAATAGTTTAACAAGTTC-AGAAGTTCGTCCAACAAC-CA-AGAGAAGCAATTCTCACGTAA
130 TCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * * *
21078468 AAAAGTTTTTGATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGATA
194 ATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * ** * ** * * *
21078533 AGACTTCCCAATAATGGAATGTTCAGAAAATTGCTTTAAGGAATGTATCG----AAAGAGCTCGT
259 TGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATA-CT-GT
* **** * ** * ** *** * **** * *
21078594 AAAGTTTTACACG-T-TCGAA-AATTCGTCCAA-TAACCAAGAGAGAAAAAATTC-T-CACGTAA
322 AAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGT-TTGAAAAGTTCGAAAGTTCATCCAAG-AA
** ** * *
21078653 ATAA-ATGTTA-AATTC-AAAG-ACCAA-AAGTTTTT--TTACATAATGA-C-
384 CCAAGA-GAAACAATTCTCACGTA--AATAAGTTTTTAATT-CA-AA-GACCA
* * * ** * ***
21078697 AAACTAT-TTAGACCAATTG--ATGCGATTT---CCCGA-GCATG-GAATGTT--CGA--A-A-A
1 AAACT-TGTT-TACAAAATGACAAACTATTTAGACAAAATG-ATGCG-AT-TTCCCGAGCATAGA
* *** * **
21078748 ATAGCTT--GAAAGAGTGGACT-GTCTTGAAT--A-C-T-TT-AAGGAACTG-AAGTTGTAAAAG
61 AT-G-TTCAGAAA-A-TTG-CTCG-AAGGAATGGATCGTCTTGAA--TACTGTAAG--G-AACCG
* ** * * * ** * * *
21078803 AACTCGTACAAG--TTTG-ACTAGTTTG-GAAGTTCGTCAAA----G----A--ACCAAGGGAG-
115 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCG--AAAGTTCGTCCAAGAACAAAGAGAGA
* * * * *
21078853 AACAATCCTCACGTAAACAGGTGTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA
178 AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTA
* * * * *
21078918 TTTAGACCAAATGATGCGATTTCTCGAGCATGGAATG-TTCGAAAAATTGCTCGAAA-GAATGGA
243 TTTAGACAAAATGATGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTC-AAAGGAATGGA
* *
21078981 TCGTCTTAAATACTGTAAGGAACC-AAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCAAAA
306 TCGTCTTGAATACTGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAA
* * * *** * *
21079045 GTTCGTCCAACAGCCAAGAGAAACAATTCTCACGTAAATAAGTTTTCGTTTTAAAGACAA
371 GTTCATCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21079105 AAACTTGTTTACGAAATGAAAAACTACTTAGTCTAAATGATGCGATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21079170 CA-AAAATTGCTCAAAGGAATGGATCGTCTTAAATACCT-TAAGGAACCGAAGTTACAAAAGAAC
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATA-CTGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21079233 TCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAATAACCAAGAGAGAGAAACAATTCTCACATA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAA-AGAGAGAAACAATTCTCACGTA
* *
21079298 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
** * * * *
21079363 ACGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAATGAATGGATCGTCTTAAATACT-TC
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT-
* * * * *
21079427 AAGGAATCGAAGTTATAAAAGAACTCATAAAA----G--AAGTTCGGAAGTTCATCTAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCA
* * *
21079486 AGAGAAACAATTCTCACGTAAATAAGTTTTTGATTTAACGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21079530 AACCTTGTTTACAAGATGGCAATCCATTTAGAGC-AAATTATGCGATTTCCCGAGAAT-GTAATG
1 AAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATGATGCGATTTCCCGAGCATAG-AATG
* * * * * * *
21079593 CTT-AGGAAATTGCTCGAAGGAGTCGATCATCTTGAATACTTTTAGGAATCGAAGTTATAAAAGA
64 -TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGA
* * * * * *
21079657 AGTCGTAATAGTTTAACAAGTTC-AGAAGTTCGTCCAACAAC-CA-AGAGAAGCAATTCTCACGT
128 ACTCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGT
* * * *
21079719 AAAAAAGTTTTTGATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGA
192 AAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGA
** * ** * ** * * *
21079784 TAAGACTTCCCAATAATGGAATGTTCAGAAAATTGCTTTAAGGAATGTATCG----AAAGAGCTC
257 TGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATA-CT-
* **** * ** * ** *** * **** * *
21079845 GTAAAGTTTTACACG-T-TCGAA-AATTCGTCCAA-TAACCAAGAGAGAAAAAATTC-T-CACGT
320 GTAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGT-TTGAAAAGTTCGAAAGTTCATCCAAG-
** ** * *
21079904 AAATAA-ATGTTA-AATTC-AAAG-ACCAA-AAGTTTTT--TTACATAATGA-C-
382 AACCAAGA-GAAACAATTCTCACGTA--AATAAGTTTTTAATT-CA-AA-GACCA
* * * ** * ***
21079950 AAACTAT-TTAGACCAATTG--ATGCGATTT---CTCGA-GCATG-GAATGTT--C-AG-A-A-A
1 AAACT-TGTT-TACAAAATGACAAACTATTTAGACAAAATG-ATGCG-AT-TTCCCGAGCATAGA
* *** * **
21080001 ATAGCTT--GAAAGAGTGGACT-GTCTTGAAT--A-C-T-TT-AAGGAACTG-AAGTTGTAAAAG
61 AT-G-TTCAGAAA-A-TTG-CTCG-AAGGAATGGATCGTCTTGAA--TACTGTAAG--G-AACCG
* ** * * * ** * * *
21080056 AACTCGTACAAG--TTTG-ACTAGTTTG-GAAGTTCGTCAAA----G----A--ACCAAGGGAG-
115 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCG--AAAGTTCGTCCAAGAACAAAGAGAGA
* * * * *
21080106 AACAATCCTCACGTAAACAGGTGTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA
178 AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTA
* * * * *
21080171 TTTAGACCAAATGATGCGATTTCTCGAGCATGGAATG-TTCGAAAAATTGCTCGAAA-GAATGGA
243 TTTAGACAAAATGATGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTC-AAAGGAATGGA
* *
21080234 TCGTCTTAAATACTGTAAGGAACC-AAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCAAAA
306 TCGTCTTGAATACTGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAA
* * * *** * *
21080298 GTTCGTCCAACAGCCAAGAGAAACAATTCTCACGTAAATAAGTTTTCGTTTTAAAGACAA
371 GTTCATCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21080358 AAACTTGTTTACGAAATGAAAAACTACTTAGTCTAAATGATGCGATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21080423 CA-AAAATTGCTCAAAGGAATGGATCGTCTTAAATACCT-TAAGGAACCGAAGTTACAAAAGAAC
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATA-CTGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21080486 TCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAATAACCAAGAGAGAGAAACAATTCTCACATA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAA-AGAGAGAAACAATTCTCACGTA
* *
21080551 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
** * * * *
21080616 ACGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAATGAATGGATCGTCTTAAATACT-TC
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT-
* * * * *
21080680 AAGGAATCGAAGTTATAAAAGAACTCATAAAA----G--AAGTTCGGAAGTTCATCTAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCA
* * *
21080739 AGAGAAACAATTCTCACGTAAATAAGTTTTTGATTTAACGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * ** * * * *
21080783 AACCTTGTTTACAAGATGGTAATCCATTTAGAGC-AAATTATGCGATTTCCCGAGAAT-GTAATG
1 AAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATGATGCGATTTCCCGAGCATAG-AATG
* * * * * * *
21080846 CTT-AGGAAATTGCTCGAAGGAGTCGATCATCTTGAATACTTTTAGGAATCGAAGTTATAAAAGA
64 -TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGA
* * * * * *
21080910 AGTCGTAATAGTTTAACAAGTTC-AGAAGTTCGTCCAACAAC-CA-AGAGAAGCAATTCTCACGT
128 ACTCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGT
* * * *
21080972 AAAAAAGTTTTTGATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGA
192 AAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGA
** * ** * * ** * * *
21081037 TAAGACTTCCCAATAATGGAATGTTCAGAAAATTACTTTAAGGAATGTATCG----AAAGAGCTC
257 TGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATA-CT-
* **** * ** * ** *** * **** * *
21081098 GTAAAGTTTTACACG-T-TCGAA-AATTCGTCCAA-TAACCAAGAGAGAAAAAATTC-T-CACGT
320 GTAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGT-TTGAAAAGTTCGAAAGTTCATCCAAG-
** ** * *
21081157 AAATAA-ATGTTA-AATTC-AAAG-ACCAA-AAGTTTTT--TTACATAATGA-C-
382 AACCAAGA-GAAACAATTCTCACGTA--AATAAGTTTTTAATT-CA-AA-GACCA
* * * ** * ***
21081203 AAACTAT-TTAGACCAATTG--ATGCGATTT---CTCGA-GCATG-GAATGTT--C-AG-A-A-A
1 AAACT-TGTT-TACAAAATGACAAACTATTTAGACAAAATG-ATGCG-AT-TTCCCGAGCATAGA
* *** * **
21081254 ATAGCTT--GAAAGAGTGGACT-GTCTTGAAT--A-C-T-TT-AAGGAACTG-AAGTTGTAAAAG
61 AT-G-TTCAGAAA-A-TTG-CTCG-AAGGAATGGATCGTCTTGAA--TACTGTAAG--G-AACCG
* ** * * * ** * * *
21081309 AACTCGTACAAG--TTTG-ACTAGTTTG-GAAGTTCGTCAAA----G----A--ACCAAGGGAG-
115 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCG--AAAGTTCGTCCAAGAACAAAGAGAGA
* * * * *
21081359 AACAATCCTCACGTAAACAGGTGTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA
178 AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTA
* * * * * * *
21081424 TTTAGACCAAATAATGCGATTTCTCGAGCATTGAATG-TTCGAAAAATTGCTCGAAA-GAATGGA
243 TTTAGACAAAATGATGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTC-AAAGGAATGGA
* *
21081487 TCGTCTTAAATACTGTAAGGAACC-AAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCAAAA
306 TCGTCTTGAATACTGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAA
* * * *** * *
21081551 GTTCGTCCAACAGCCAAGAGAAACAATTCTCACGTAAATAAGTTTTCGTTTTAAAGACAA
371 GTTCATCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21081611 AAACTTGTTTACGAAATGAAAAACTATTTAGTCTAAATGATGCCATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* *
21081676 CA-AAAATTGCTCAAAGGAATGGATCGTCTTAAATACCT-TAAGGAACCGAAGTTATAAAAGAAC
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATA-CTGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21081739 TCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAATAACCAAGAGAGAGAAACAATTCTCACATA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAA-AGAGAGAAACAATTCTCACGTA
* *
21081804 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
** * * * *
21081869 ACGATTTCCCGAGCATGGAATGTTTAGAAAATTGTTCGAATGAATGGATCGTCTTGAATACT-TC
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT-
* * * * *
21081933 AAGGAATCGAAGTTATAAAAGAACTCATAAAA----G--AAGTTCGGAAGTTCATCTAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCA
* * *
21081992 AGAGAAACAATTCTCACGTAAATAAGTTTTTGATTTAACGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21082036 AACCTTGTTTACAAGATGGCAATCCATTTAGAGC-AAATTATGCGATTTCCCGAGAAT-GTAATG
1 AAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATGATGCGATTTCCCGAGCATAG-AATG
* * * * * * *
21082099 CTT-AGGAAATTGCTCGAAGGAGTCGATCATCTTGAATACTTTTAGGAATCGAAGTTATAAAAGA
64 -TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGA
* * * * * *
21082163 AGTCGTAATAGTTTAACAAGTTC-AGAAGTTCGTCCAACAAC-CA-AGAGAAGCAATTCTCACGT
128 ACTCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGT
* ** * *
21082225 AAAAAAAATTTTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGAAAAAATGA
192 AAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGA
* * ** *
21082290 TGAGACTTCCCAATAATGGAATGTTCAGAAAATTGCTCAAAGGAATGGA---TC--GAA-A--G-
257 TGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
** ** * * * * * * *
21082346 -AGCTAGTAAAGTTTTACAAG--TTCG-AAAA--TT----CG-TC-CAA--T-AACCAAGAGA-G
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGA-ACC
* * ** *
21082395 AA-A-AAATTCTCA-TGT-AAATAAAT--GTTTAATTCAAAGATCAAA-A-C-
386 AAGAGAAA--C-AATTCTCACGTAAATAAGTTT--TT--AA-TTCAAAGACCA
** * * * * * *
21082439 --TTTTTTTTACATAATCACAAACTATTTAGACTAATTGATGCGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* ** * * * * *
21082502 CGGAAAACAGCTTGAAGGAGTGGA-CTGTCTTGAATACTTTAAGGAACTGAAGTTGTAAAAGAAC
66 CAGAAAATTGCTCGAAGGAATGGATC-GTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * ** * * * * *
21082566 TCGTAAAAGTTTGACTAGTTCGGAAGTTCGTTAAAGAACCAAGGGAG-AACAATCCTTAGGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * *
21082630 TAGGTGTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGC
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* * * * * *
21082695 GATTTCCCGAGCATGGAAAGTTCAGAAAATAGCTCGAAGGAATGGATCATCTTGAATACTGTAAG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * *
21082760 GAACC-AAGTTATAAAAGAACTCGTAAAAGTTTAAAAAGTTCGAAAGTTCGTCCAACAGCCAAGA
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAGA
** * *
21082824 GAAACAATTCTCACGTAAATAAGTTTTTGTTTTAAAGATCA
390 GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
21082865 AAACTTGTTTTCAAAATGAAAAACTATTTAGACTAAATGATGCGATTTCTCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* *
21082930 CA-AAAATTGCTCAAAGGAATGGATCGTCTTAAATACCT-TAAGGAACCGAAGTTATAAAAGAAC
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATA-CTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * *
21082993 TCGTAAAAATTTGAAAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGAGAAACAATTCTCACATA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAA-AGAGAGAAACAATTCTCACGTA
* *
21083058 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* * * ** *
21083123 ATGATTTCCCGAGCATGGACTGTTTAGAAAATTGCTTGAATGAATGGATCGTCTTGAATACT-TC
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT-
* * * * * * * *
21083187 AAGGAATCGAAGTTATAAAAGAATTCATAAAAGTTGGACAAGTTCGGAAGTTCATCAAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCA
* *
21083252 AGAGAAACAATTCTCACGTAAATAAGTTTTTGATTTAAAGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* ** * * * * *
21083296 AAACTTGTTTACAAGATGGGAATCCATTTAGACCAAATTATGCGATTTCCCGAGAAT-GTAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
* * * * * * * *
21083360 TTAGAAAATTGCTTGAAGGAGTCGATCATCTTGAATACTTTTAGGAATCGAAGTTATAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
21083425 TCGTAATAGTTTAACAAGTTC-AGAAGTTCATCCAACAAC-CA-AGAGAAGCAATTCTCACGTAA
130 TCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* ** *
21083487 AAAAAATTTTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
194 ATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* ** *** ** * * * *
21083552 CGACATCTGGATAATGAAATG-CTCGAAAAATTGCTCAAAGGAATGGATCG---T-AAGA--GCT
259 TGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTG-T
* * * * * * *
21083610 --CGAA--AAA-TTTTACAAG--TTCG-AAAA--TT----CG-TC-CAA--T-AACCAAG-----
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCA
*
21083651 AGAGAAACAATTCTCACGTAAATAAGTGTTTAATTCAAAGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
21083695 AACAGTT-TTTACAAAATGACAAACCATTTAGAC-CAATAGATGTGATTTCCCGAGCGTGGAATG
1 AA-ACTTGTTTACAAAATGACAAACTATTTAGACAAAAT-GATGCGATTTCCCGAGCATAGAATG
* * * * * * *
21083758 TTCAAAAAATTGCTTGATGGAATGGATCATCTTGAATACTGTAAAGAACCGAATTTATAAATGAA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * * *
21083823 CTCGTAAAAGTTTGACAAGTTTGAAAGTTTGTCGAAGAACCAAGAGAGAAACAATTCTCACGTAA
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * * * * *
21083888 AAAAGTTTTTAATTTAAAGGCC-AAACTTGTTCACAAAAAGACAAACAATTTAGA-AAAATTATG
194 ATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* ** * * * * * * * * *
21083951 CGATTTTTCGAGCATAGAATGTTTA-AAAGTTGATCGAAGGAATGTATCGTCTTCAA-ACTATAG
259 TGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAA
* * * **
21084014 GGAA-CAGAAGTTATAAAAGAATTCATAAAAGTTTGAAAACTTC-AGAAGTTTGTCCAAGAACCA
324 GGAACCA-AAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAACCA
* *
21084077 AGAGAAACAATTCTCACGTAAATAAGTTTTTGATTCAAAGGCCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *** * *
21084121 AAACTTGTTTTCAAAATGACAAACTATTTAGACCAAATGCTATTATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * *
21084186 GAAAAAATTGCTCGAAGGAATGGATTC-TCTTGAATACTTTAAGAAACCGAAGTTATGAAAGAAC
66 CAGAAAATTGCTCGAAGGAATGGA-TCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * *
21084250 TCGTAAAAGTTTGACAAGTTTGAAAGTTCGTCCAAGAACCAAGAGAGAAATAATTCTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * *
21084315 TAAGTTTTTAATTCAAACAACAAAACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATA
195 TAAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * *
21084379 CGATTTCCCTAGCATGGAATGTTCT-GAAAATTGCTCGAAA-GAATGGATCGTCTTGAATACTTT
259 TGATTTCCCAAGCATGGAATGTT-TAGAAAATTGCTC-AAAGGAATGGATCGTCTTGAATACTGT
* * * **
21084442 ATGGAGCTGAAA-TTATAAAAGAACTCGTAAAAGTTTG--AA-----AAA-TT-ATAAAAGAA-C
322 AAGGAAC-CAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC
* * * * *
21084496 -TGA-AAATAATTCTCACATAAATAAGTTCTTTTAATTCAAACACAA
386 AAGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAAGACCA
* * * * *
21084541 AAATTTGTTTACAAAATAACAAACTATTTA-ACCAAACGATGCGATTTCCC-AGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * *
21084604 C-GAAAAATTGCTCAAAGGAGTGGATCGTCTTGAATACTTTAAGGAATCAAAGTTATAAAATAAC
66 CAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21084668 TCGT---A-----A-AAGTTCGAAAGTTCGTCCGAGAACCAAGAGTGAAACAATTCTCATGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * * * * *
21084724 AAAGTTCTTTTAATTCAAACACAAAAACTTGTCTACAAAAT-ACAAACTATATATATACCAATTA
195 TAAG-T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTAT-T-TAGACAAAATG
** * * * **
21084788 ATGCAATATCCCGAATG--TGGAATGTTCAGAAAATTGCTCAAAGGAGTGGATTATCTTGAATAC
256 ATGTGATTTCCC-AA-GCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATAC
* * * * * *
21084851 TTTAAGGAACCGAAGTTGTAAAAGAACTCGTAAAAGTTTGACAAGTTTGGAAGTTCATCCAAGAA
319 TGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAA
* * * * ** *
21084916 CCAAGGGAGAATAATCCTCAGGTAAATAAGGGTTTAATCCAAAGACCA
384 CCAAGAGA-AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21084964 AAAGTTATTTAGAAAATGACATACTATTTATACCAAATGATGCGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
*
21085029 C-GAAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTGTAAGGAACC-AAGTTATAAAAGAAC
66 CAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
21085092 TAGTAAAAGTTTGA-ACAGTTC-AGTAGTTCGTCCAACAGC-CA-AGAGAAACAATTCTCACATA
130 TCGTAAAAGTTTGACA-AGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTA
*** * *
21085153 AATAAGTTTTCGTTTTAAAGACCAAAACTTGTTTAAAAAATGA-AAAC------G----AAT--T
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* * * * * * *
21085205 -CGATTTCCCGAGAATGGAAAGTTCA-AAAATTTCTCAAAGGAATGGATCGTCTTGAATACTTTA
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * * * * *
21085268 AGGAACCGAAGTTATAAAACAACTCGTAAAAGCTTGACAAGTTTGGAAA-TTCGTCCAAGAACAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAG-TTCGAAAGTTCATCCAAGAAC-C
*
21085332 AGAGAGAAATAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
386 A-AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * ** *
21085378 AAAGTTATTTAAAAAATGACAAACAATTTAGAGTAAATGATGCGATTTCCCGAGCAT-GGATAGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAAT-GT
* * * * *
21085442 TC-GAAAAATTACTCGAAGAAATGGATCGCCTTCAATACTTTAAGGAACCGAAGTTATAAAAGAA
65 TCAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * * * * *
21085506 CTCGTAAAACTTGGACAAGTT-TAGAACTTCGTCCAAAAAC-CA-AGAGAAACAATTCTCACGTA
129 CTCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTA
* *** * * *
21085568 AACAAGTTTTCGTTTTAAAGACCAAAACTTGTTTACAAAATGAAAAACTATTTAGACTAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* * * * * *
21085633 GCGATTTCCCGAGAATGGAATGTTCA-AAAATTGCTCAAAGGAATAGATCGTCTTGAATACTTTA
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * * * *
21085697 AGGAACCGAAGTTATAAAAGAACTCGTAAAATTTTGACAAGTTTGGAAGTTCGTCCAAGAACCAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAA
* *
21085762 GAGAAAAACAATTCTCACGTATATAAGTTTTTAATTCAGAGACCA
388 GAG--AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21085807 AAACTTGTTTATAAAATGACAAACAATTTAGAC-AAATGATACGATTTCACGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * *
21085871 TAAAAAATTGCTCGAATGAATGGATCGTCTTGAATACTTTAAGGAATCGAAGTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * * * *
21085936 CGTAATAGTTGGACAAGTT-TAGAAGTTCATCCAAGAAC-CA-AGAGAAAGAATTCTCACGTAAA
131 CGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* *** * * * *
21085998 CAAGTTTTCGTTTTAAAGACCAAAACTTGTTTACAAAATGAAAAACTATTTAGACTAAATGATGC
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* * * * * *
21086063 GATTTCTCGAGAAAGGAATGTTCA-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTTTAAG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * * * *
21086127 GAACCGAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTT-TAGAAGTTCGTCCAACAACCAAG
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAACCAAG
21086191 AGAAAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
389 AG--AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
21086235 AAACTTGTTTACAAAATGACAAA-TAATTTAGACCAAATGATACGACTTCCCGAGCATGGAATGT
1 AAACTTGTTTACAAAATGACAAACT-ATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * ** * *
21086299 TTAGAAAATTACTCGAATAAATGGATCGTCTTGAATACTTTAAGGAATCGAAGTTATAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
** * * *
21086364 TCGTAAAAGTAGGACAAGTTCGGAAGTTCGTCTAAGAAC-CA-AGAGAAACAATTCTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * * * * * *
21086427 TAAGTTTTTGATTTAAAGACCAAAACTTGTTTACAAGATGGCAATCTATATAGACCAAATTATGC
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* * * * * * * * * * *
21086492 GATTTCTCGAGAATGTAATGTTAAGAAAATTGCTCGAAGGAGTCGATCATCTTGAATGCTTTAAG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * * * * *
21086557 GAATCGAAGTTATAAAAGAAGTCGTAATAGTTT-AACAAGTTC-AGAAGTTCGTCCAATAACCAC
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAA-AAGTTCGA-AAGTTCATCCAAGAACCAA
* * * *
21086620 GAGAAGCAATTCTCACGTAAAAAAGTTTTTGACTCAAAGACCA
388 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
21086663 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAAGCGACTTCCCGA-CAATGGAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGC-ATAGAATGT
* *
21086727 TCAAAAAATTGCTCAAAGGAATGGA---TC--GAA-A--G--A-G---C----TT-T--------
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
21086765 T-GT-AAAGTTTTACAAGTTTGAAAATTCGTCCAATAACCAAGAGAGAAACAATTTTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * * * * *
21086828 TAAGTGTTTAATTCAAAGGCCAAAAGTTTTTTACAAAATGGCAAACTATTTAGACCAATTGATGC
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* ** * * *
21086893 GATTTCCCGAGTGTGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTGTAAG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * * **
21086958 GAACCGATGTTATAAATGAACTCGTAAAAGTTTGACAAGTTTC-AAAGTTTGTCCAAGAACCAAG
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAG-TTCGAAAGTTCATCCAAGAACC-A-
* * * *
21087022 AGAGAAACAATTCTCACGTAAAAAAGTTTTTAATTTAAAGGCAA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
21087066 AAACTTGTTTACAAAATGACAAACAATTTAGA-AAAATGATGCAATTTTCCGAGCATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * * *
21087130 TAGTAAGTTGCTCGAAGGAATGTATCGTCTTGAA-ACTATAGGGAACCGGAGTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * * *
21087194 CATAAAAGTTTGAAAAGTTCGGAAGTTTGTCCAAGAAC-CA-AGAGAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * * *
21087257 AAGATTTTGATTCAAAGACCAAAAGTTGTTTCCAAAATGACAAACTATTTAGACCAAATGCTGAT
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG-T
* * * * * * *
21087322 -ATTTCCCGAGAATGGAATG-TTCGAAAAATTGCCCGAAGGAATGGATCATCTTGAATACTTTAA
260 GATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAA
* * * * * * *
21087385 GAAACCGAAGTTATGAAAGAACTGGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGACCCAAG
324 GGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-A-
* * *
21087450 AGAGAAATAATTCTCACGTAAATAAGTTTTTAATTCAAACAACA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21087494 AAACCTT-TTTCCAAAATGACAACCTATTTAAACCAAGTGATACGATTTCCCTAGCAT-GAAATG
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATG
* * * * * * *
21087557 TACTGAAAATTGCTCGAAAGAATGGATCGTCTTGAATACTTTACGGAACTGAAATTATAAAAGAA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * ** * * *
21087622 CTCGTAAAAGTTTG--AA-----AAA-TT-AT--AA-AA-GAACTGA-TAATAATTGTCACGTAA
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * * *
21087673 ATAAGTTCTTTTAATTCAAACACAAAAATTTGTTTACAAAATAACAAACTATTTA-ACCAAATGA
194 ATAAG-T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGA
** * * * *
21087737 TGCAATTTCCCAAGCATGGAATG-TTCGAAAAATTG-TCGAAGGAGTGGATCGTCTTGAATTCAT
257 TGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATAC-T
* * * *
21087800 -TAAGGAACCAAAGTTATAAAATAACCCGTAAAAG--T------TCCG-AAGTTCTTCCAAGAAC
320 GTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAAC
* * * *
21087855 CAAGAGAGAAACAATTCTCATGTAAAAAAGTTCTTTTAATTCAAACACAA
385 C-A-AGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAAGACCA
* * * * * * *** * *
21087905 AAACTTGTCTACAAAATTAGAAACTATTTATACCAAATGATGCGATATCCCGAATGTGGAAAGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * *
21087970 CAAAAAATTGCTCGGAGGAGTGGATTGTCTTGAATACTTTAAGGAACCGAAGTTGTAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * * * *
21088035 CGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGGGAG-AATAATCCTCAGGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
** * * * * * *
21088099 AAGGGTTTAATTGAAAGACCAAAAGTTGTTTACAAAATGACACACTATTTATACCAAATGATATG
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGTG
* * *
21088164 ATTT-CC---C---GAATG-TTCGAAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTGTAAG
261 ATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* ** * * * * *
21088221 GAACC-AAGCTATAAAAGAACTCGTAAATTTTTGAAAAGTTTGGAAGTTCGTCCAACAGCCAAGA
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAGA
*** *
21088285 GAAAC-ATTCTCACGTAAATAAGTTTTCGTTTTAAAGACCA
390 GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * *
21088325 AAACTTGTTTAAAAAATGA-AAACTATTTAAACTAAATGATGTGATTTCTCGAGAATGGAATATT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21088389 CA-AAAATTGCTC-ATAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAATTATAAAACAAC
66 CAGAAAATTGCTCGA-AGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * *
21088452 TCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCATGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * **
21088517 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGATAC
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* * * * * *
21088582 GAGTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAATGAAAGGATCGTCTTGAATACTTTAAG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * * * * * * ** *
21088647 GAATCGAAGTTGTAAACGAACTCGTAAAAGTTGGACAAGTTCAAAAGTTCGTCCAAGAATTAAGG
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAGA
* *
21088712 GAAACAATTCTCACGTAAATAAGTTTTTGATTTAAAGACCA
390 GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21088753 AAACTTGTTTACAAAATGGCAATCTATTTAGACCAAATTATGCGATTTCCCGAGAAT-GTAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
* * * * * * *
21088817 TCAGAAAATTGCTCGAAGGAGTCGATCATCTTGAATACTTTAAGGAATCGATGTTATAAAAGAAT
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * *
21088882 TCTTAAAAGTTTGACAAGTTC-AGAAGTTCGTCCAAGAAC-CA-AGAGAAGCAATTCTCACGTAA
130 TCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * **
21088944 AAAAGTTTTTGATTCAAAGACCAAAACTAGTTTACAAAATGACAAACTAAATAGACAAAATGATG
194 ATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * ** * * *
21089009 AGACTTCCCAATAATGGAATGTTCAGAAAATTGCTCAAAGGAATGGATCG----AAAGAGCTCGT
259 TGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATA-CT-GT
* **** *** * ** *** * **** * * *
21089070 AAAGTTTTACAAG-T-TCGGA-AATTCGTCCAA-TAACCAAGAGAGAAAAAATTC-T-CACGTA-
322 AAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGT-TTGAAAAGTTCGAAAGTTCATCCAAGAAC
** * * *
21089128 -AAGA-AATGTTTAATTC-AAAG-ACCAA-AAGTTTTT--TACAAAAGGA-C-
385 CAAGAGAA---ACAATTCTCACGTA--AATAAGTTTTTAATTC-AAA-GACCA
* * * ** * * ** * * *
21089172 AAACTAT-TTAGACCAATTG--ATGCGATTTCCCGAGCGTGGAATG-TTCAGAAAATTGCTCCAA
1 AAACT-TGTT-TACAAAATGACAAACTATTT--AGA-C--AAAATGATGC-G---ATTTC-CCGA
* * * * * ** * * * **
21089233 GGA-ATGGATCG-TCTTGAATACTG-T--AAGGAACCGA-AGTTATAAATGAACACATAAAAGTT
54 GCATA-GAAT-GTTC-AGAAAATTGCTCGAAGGAATGGATCG-TCT---TGAATAC-TGTAAG--
** ** * ** ** * *** *
21089292 TGACAAGTTTGGAAGTTTATCCAAGAAC-CAAGAGAGAAACAATTCTCACGTAAAAAAGTT--TT
109 -G--AA---CCGAAG-TTATAAAAGAACTC--G-TA-AAA-GTTTGACAAGTTCGAAAGTTCGTC
* *** * * * * * ***** * * ** **
21089354 TAA-TTTAAAG-GCA-AAA-ACTTTTTAC-AAAATGA-CAAACAATTTAGAAAAATAATGCGATT
162 CAAGAACAAAGAG-AGAAACAATTCTCACGTAAATAAGTTTTTAATTCA-AAGACCAAAAC--TT
* * * * * * * * *
21089413 -TTTCGAGCATAGAATGTTTAGAAAGT-TGCTCGA-AGGAATG-TATCATCTT--GAAGCTGCAG
223 GTTT--A-CA-A-AATG---ACAAACTAT-TTAGACA-AAATGATGTGAT-TTCCCAA---GCAT
* * *** * ** * ** * *
21089472 GGAATCGGAGTTATAAAAGAACTCATAAAAGTTTGAAAAGT-TCGGAAGT-TTGTCCAA-GAACC
274 GGAAT--G-TTTAGAAAATTGCTC--AAAGGAATGGATCGTCT-TGAA-TACTGT--AAGGAACC
** * * * **
21089534 AAGAG--A-AACAA-TTCTCACGTAAATAAGTTTTTGATTCAAA-TACCAAAACTTGTTTCC-A-
330 AA-AGTTATAA-AAGAACT--CGT-AA-AAG--TTTGA---AAAGT-TCGAAAGTT-CATCCAAG
* * * * * * ** * ** ***
21089592 AA--ATGACAAACTATT-TAGAC-CAAAT--GCTGCTATTTCCCGAGAATG
382 AACCAAGAGAAACAATTCT-CACGTAAATAAGTTTTTAATT-CAAAGACCA
* * * ** * * *** * ** * **
21089637 AAA--TGTTCAAAAAATTGCTCAAAGGA-ATGGATCATCTTGAATAC--TTT-AAGA-AACCGAA
1 AAACTTGTTTACAAAA-TG-ACAAACTATTTAGA-CAAAATG-ATGCGATTTCCCGAGCATAGAA
* * * * * * * *
21089695 -GTT-ATGAAAGAACTGGT-AAAAG-TTTGA-CAAGT-TCGAA-AGTTCGTCCAA-GAACC-AAG
62 TGTTCA-G-AA-AATTGCTCGAAGGAATGGATC--GTCTTGAATA-CT-GT--AAGGAACCGAAG
* * * * * ** * *** *
21089751 --AGAGAAATAATTC-T-CACG-TAAATAAGTTTTTAA--T--T-C-A-AAC--A-ACA-AAAC-
118 TTATA-AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACA
* * * * * * * * * * * ** *
21089799 CTTTTTAC-AAAATGACAAACTATTTAGA-CCAAATGATGC--GATTTCTCGAGCATGGAATTCG
182 ATTCTCACGTAAAT----AAGTTTTTA-ATTCAAA-GA-CCAAAACTTGTTTA-CA---AAAT-G
* ** * * * * * * *
21089860 A-AAAATAGCTCGA-AGGAATGGAT-TGACTT--GAATACTTTATGGAACCGAAATTATAAAAGA
235 ACAAACTATTTAGACA-AAAT-GATGTGATTTCCCAA-GC---ATGGAA-TG---TT-TAGAA-A
* ** * * ** * *
21089920 ACTTG-T-AAAAGTTTGAGA-AGATC--GAAAGTTCATCCAA-GAACTAAAAG--AGAAACA-AT
288 A-TTGCTCAAAGGAATG-GATCG-TCTTG-AA-TAC-TGTAAGGAAC-CAAAGTTATAAA-AGA-
* * ** * ** * * * *
21089976 TCTCACGTAAATAAGTGTTTAATTCAAAGACCAAAAGTTGTGTACAA-AA--TA-ACAAACTATT
344 ACT--CGT-AA-AA--GTTTGA---AAAGTTCGAAAGTT-CATCCAAGAACCAAGAGAAACAATT
* * * *** * ** *
21090037 -TAGAC-CAAAT--GATGCGATTTC-CCGAGCA
399 CT-CACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * ** * * **** * * *
21090065 TGGAA--TGTTCGA-AAAATTGCTCGAAGGA-ATGGATCGTCTTGAATAC--TTT---AAG-AAA
1 --AAACTTGTT-TACAAAA-TG-ACAAACTATTTAGA-CAAAATG-ATGCGATTTCCCGAGCATA
* * * *** * * ** * ** * * *
21090120 CCAAAGTT-ATAAAAGAACTCATAAAAGTTTGAAAAG--TTCAATAGTTCGTCAAAGAACC-AAG
59 -GAATGTTCAGAAAATTGCTC--GAAGGAATGGATCGTCTTGAATA-CT-GT-AAGGAACCGAAG
* * * ** * ** ******
21090181 --AGAGAAACAATTCTCACGTAATAAGTTTTTAATCCAAAGACCAAAAGTTTTTTTTTTTACAAA
118 TTATA-AAAGAA--CT--CGTAA-AAG--TTTGA--C-AAGTTCGAAAGTTCGTCCAAGAACAAA
* * * * * * * * * ** * * *
21090244 -ATGACACACTATT-TATAC-CAAAT--GATGTCATTTC-CTGAGCATGTAA--TGTTTAGAAAA
172 GA-GAGAAACAATTCT-CACGTAAATAAGTTTTTAATTCAAAGACCA--AAACTTGTTTACAAAA
* * * * * * * * * * * **
21090301 TTGCTCGAAGGAATGGATTGTCTTGA-ATAATGTAAG-GA--ACCAAAGTTAT-AAAAGAAATCG
233 -TG-AC-AA--ACT--A-T-T-TAGACAAAATG-ATGTGATTTCCCAAG-CATGGAATG--TTTA
*** * * * * * * * * *
21090361 GAAAAGTTTAACAAGTTCGGAA--GTTCGTC--CAAGCAC--CAAGAGAAAC-AA-TTCT-CATG
284 GAAAA-TTGCTCAA---AGGAATGGATCGTCTTGAA-TACTGTAAG-GAACCAAAGTTATAAAAG
* ** ** * * ** ** * *
21090417 TAA---ATAAATTTTTGATTCAAAGGGCAAAACTTGTTTCCAA-AA-TGA-AG-AACTATT-TAG
343 -AACTCGTAAAAGTTTGA---AAAGTTCGAAAGTT-CATCCAAGAACCAAGAGAAACAATTCT-C
* * ** ** ***
21090474 AC-CAAAT--GCTGCT-ATCTCCCGAGAATG
402 ACGTAAATAAGTTTTTAAT-T-CAAAGACCA
* * * * * * *** ** * **
21090501 GAA--TGTTCAGAAAATTGCTCGAAGGC-A--TGGATCATCTTGAATGC--TTT-AAG-GAACCG
1 AAACTTGTTTACAAAA-TG-AC-AA-ACTATTTAGA-CAAAATG-ATGCGATTTCCCGAGCATAG
* * * * * * * *
21090557 AA-GTTATAAAAGAACTTG-T-AAAAG-TTTGA-CAAGT-TCGAAAGTTCT-TCCAA-GAACC-A
60 AATGTT-CAGAA-AA-TTGCTCGAAGGAATGGATC--GTCTTG-AA-TACTGT--AAGGAACCGA
* * * * * ** *** *
21090613 AG--AGAGAAACAATTC-T-TACG--T-A-AA--T---AAGTT--TTTAATTCCCAAGAGAGAAA
116 AGTTATA-AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAA
* * ** * * * *
21090663 CAATTCTTACGTAACTAAGTTTTTAATTCAATCAACAAGACTTTTTTACAAAATAACAAACTATT
180 CAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATT
* * * * *
21090728 TAGACCAAATGATGCGATTT-CCGAGCATGGAATGTTTTA-AAAATTGATCGAAGGAATGGATCG
245 TAGACAAAATGATGTGATTTCCCAAGCATGGAATG-TTTAGAAAATTGCTCAAAGGAATGGATCG
* ** * *
21090791 TCTTGAATACAT-TATGGAACTGAA-TTATAAAAGAACTCGTAAAAAGTTTGACAAGTTCGGAAG
309 TCTTGAATAC-TGTAAGGAACCAAAGTTATAAAAGAACTCGT-AAAAGTTTGAAAAGTTCGAAAG
* * * * * *
21090854 TTCGTCCAAGAACCAAAATAGAAACAACTCTCACGTAAATAAGTATGTAATTCGAAGACCA
372 TTCATCCAAGAACC--AAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * ** *
21090915 AAACTTTTTTACAAAATGACAAACAATTTAGA-AAAATGATACGATTTTCTAAGCATAGAATATT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * *
21090979 TAGAAAGTTGCTCCAAGGAATGTATCGTCTTGAATATTGTAAGGAACCGAATTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * * * * * *
21091044 CGTAAAATTTTGATAAGTTCAAAAGTTTGTCTAAGAACCAAGAGAGAAACAATTCTCATGTAAAA
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * * * *
21091109 AAGTTCTTTTAATTCAAACACAAAAACTTGTTCACAAAATGATAAACTATTTATACCAAATAATG
196 AAG-T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * *** ** * * *
21091174 CGATTTCCCGAA-CATGGAATG-TTCGAAAAATAATTTGAAGGAGTGGATTGTCTTGAATACTTT
259 TGATTTCCC-AAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * ** *
21091237 AAGGAACCGAAGTTGTAAAAGAACTCGTAAAAGTTTGATTAGTTCGAAAGTTCATCAAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCA
* * * *
21091302 AGGGAGAACAATCCTCACGTAAATAAGTATTTAATTCAAAGACTA
387 AGAGA-AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * ** * * *
21091347 AAAGTTGTTTACAAATTGACAAACTATTCAGAGTAAATGATGCAATTTCTCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21091412 C-GAAAAATTGCTCGAAGGAATGGATCGTCTTTAATACTATAAGGAACC-AAGTTATAAAATAAC
66 CAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * * * *
21091475 TCATAAATGTTTGAAAAGTTCGGAAGTTCATCCAAGAGC-CA-AGAGAAACAATTCTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * *
21091538 TAAGTTTTCATTTTTAAAGACCAAAACTTGTTTACAAAATGAAAAAACTATTTAGACTAAATGAT
195 TAAGTTTTTA-ATTCAAAGACCAAAACTTGTTTACAAAATG-ACAAACTATTTAGACAAAATGAT
* * * * * * * *
21091603 GCGATTTCCCGAGAATAGAATGTTCA-AAAATTGCTCAATGGAATGGATCGTTTTGAATACTTTA
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * *
21091667 AGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTGGAAGTTCATCCAAGAACCGA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-A
* *
21091732 GAGAGAAACAACTCTCACGTAAATAAGTATTTAATTCAAAGACC-
387 -AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * **
21091776 AAACTTGTTTACAAAAGGACAAA-TAATTTA-AAAAAATGATGTGATTTTTCGAGCATAGAATGT
1 AAACTTGTTTACAAAATGACAAACT-ATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * * * * *
21091839 TTAGAAAGTTGCTCGAAGGAATGTACCATCTTGAATAATGTAAGGAACCGAAGTTATAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
21091904 TCGTAAATGCTTGACAAGTTCGGAAGTTCATCCAAGAAC-CA-CGAGAAACAATTCTCACGT--A
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * * *
21091965 -AA-TTTTTGATTTAAAGACCAAAACTTGTTTCCAAAATGACAAACTTTTTAGACCAAATGCTGT
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGT
* * * * * * * * *
21092028 TA-TTCCCGAGAACGGAATGTTCAAAAAATTGATCAAAGGAATGGATCATCTTGAATA-TTTAAG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * * **
21092091 GAATCGAAGTTATGAAAGAACTCATAAAAGTTTGACCAGTTCGAAAGTTCATCCAAGAACCAAGA
325 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAGA
* * **
21092156 GACAAAACAACTCTCACGTAAATAAG-TTTTAATTCAAACAATA
390 G---AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21092199 AAACTTTTTTATAAAATGACAAACTTTTTAGACCAAATAATGCCATTTCCC-ATGCAT-GAAATA
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGA-GCATAG-AATG
* * * * *
21092262 TTCAGAAAACTGCTCAAAGGAATGGATCGTCTTGAATACTTTATGGAACTGATA-TTATAAAA-A
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGA-AGTTATAAAAGA
* * * * *
21092325 AGCTCGTAAAAGTTTGACAGGTTTGGAAGTTCATCCAAGAACCAAA-AGAGAAACAATTCTCACA
128 A-CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAGAAACAATTCTCACG
* * * * * * *
21092389 TAAATGAGTATTTAATTCAAATACAAAAACTTGTTTACAAAAGGACAAACAATTTAGAAAAAATG
191 TAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATG
* **** * ** * * *
21092454 ATGCGATTTTTTGAGCATAGAATGTTTAGAATGTTGCTCGAAGGAATGTATCGTCTTGAATACGG
256 ATGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTG
* * * * *
21092519 TAAGGAA-TAGAAGTTATAAAAGAACACGTAAATGTTTGACAGGTTC-AGAAGTTCATCCAAGAA
321 TAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAA
*
21092582 CCAAGAGAAACAATTCTCACGTAAATAAGTTTTTTATTCAAAGACCA
384 CCAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
21092629 AAATTTGTTT-CAAAATGACAAACT-TCTT-GAACCAAATGCTGCTATTTCCCGAGAATGGAATG
1 AAACTTGTTTACAAAATGACAAACTAT-TTAG-ACAAAATGATGCGATTTCCCGAGCATAGAATG
* * * ** *
21092691 TTTAGAAAATTGCTCGAAGGAATGGATCGTCTTCAATACTTTAAGGAATTGAAGTTATGAAAGAA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * * * **
21092756 CTCATAAAATTTTGACCAGTTCAAAAGTTCGTGTAAGAATC-AAGAGAGAAACAATTCTCACGTA
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAGAAACAATTCTCACGTA
* * * * * * *
21092820 AATAAGTTTTTAATTCAAACAACAAAACTTTTTTACAAAATGACACATTATTTATATAAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* ** * * * *
21092885 GTCATTTCCTGATCATGTAATGTTTAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATAATGTA
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* ** * * *
21092950 AGGAACCAAAGTTATAAAACAACTCGTAAAAGTTTGACCAGTTCGGAAGTTCGTCCAAGAACAAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAA
* * *
21093015 GAGAAGCAATTCTCACGTAAATAA-ATTTTGATTCAAAGACCA
388 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21093057 AAACTTGTTT-CTAAAATGA-AGAACTATTTAGACCAAATGCTACTATCTCCCGAGAATGGAATG
1 AAACTTGTTTAC-AAAATGACA-AACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATG
* ** * *
21093120 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACT-TTAGGAGTCGAAGGTATCAAAGAA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* *
21093184 CTCGTAAAAGTTTGACCAGTTC-AAAATTCGT-C-----C--A-AGAGAAACAATTCTCACGTAA
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * * * *
21093239 A-AAGTGTTTAATTCAAAGACCAAAAGTTATTCACAAAATAACAAACTATTTAGACCAAATGATG
194 ATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * * *
21093303 CGATTTCCCGAGCATGGAATGTTT-GAAAAATTGCTCTAAGGAATGGATCGTCTTGAATACTCTA
259 TGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* ** * * * *
21093367 AGAAACTGAAGTTATAAAAGAACTCATAAAAGTTTGAAAAGTTCGGAAGTTCGTCAAAGAACCAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC--
* * * *
21093432 AAGAGAAACAATTTTCACGT-AATAAGTGTTTAATCCAAAGATCA
386 AAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
** * * * * *
21093476 AAGTTTTTTTACAGAATGACACACTATTTATACAAAATGATGTC-ATTTCCCGAGCATGGAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG-CGATTTCCCGAGCATAGAATGT
* * * * * *
21093540 TTAGAAAATTGCTCGATGGAATGGATTGTCTTGAATAATGTAAGGAACTGAAGTTATAAAAAAAA
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTAT-AAAAGAA
* * * * *
21093605 CTCAT-AAAGTTTGACAAGTTCGGAAGTTCGTTCAACAAC-CA-AGAGAAACAATTCTCACGTAA
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * * *
21093667 ATAAATTTTTGATTCACAGACCAAAACTTGTTTCCAAAATGA-AGAACTATTTAGACCAAATGAT
194 ATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACAAAATGAT
* * * * * ** * * *
21093731 GCT-ATCTT-CCGAGAATGAAATGTTCATAAAA-TGCT-GGAGAAATGGATCGTCTTGAATGCTT
258 G-TGAT-TTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTG
* * * ** * *
21093792 TAAGGAGCCGAAGTTATGAAAGAACTCGTAAAAGTTTGATCAGTTCAAAAGTTTATCCAAGAACC
321 TAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC
* *
21093857 AAGAGAGAA-ACATTCTCAC----A-AAGTTTTTAATTCAAAAAACA
386 AAGAGA-AACA-ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
21093898 AAACTTTTTTACAAAATGACAAACTATTTAGACCAAAATGATGTGATTTCCCAAGCAT-GAAATG
1 AAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATGATGCGATTTCCCGAGCATAG-AATG
* * *
21093962 TTC-GAAAATTGCTCGAAGGAATGGATCGTCTTGAGTACTCT-AGAAACCGAAGTTATAAAAGAA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * * *
21094025 CTCGTAAAAGTTTG---AG---G-AACTTCGTCAAAGAACCAATAGAGAAACAATTCTCACGT-A
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * * * * *
21094082 ATAAGTGTTTAATCCAAAGACCAAAAGTTTTTTACAAAATGACATACTATTTATACCAAATGATG
194 ATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
** * * * * * *
21094147 CCATTTCCCGAGCATGTAATATTTAGAAAAATTGCTCGAAGGAATGGATCGTCTTGAGTACTCTA
259 TGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * * * * *
21094212 AGAAACCGAAGTTATAAAAAGAACTCGTAAAAGTTTGAAAAGTTTGGAACTTCGTCAAAGAAAGA
323 AGGAACCAAAGTTAT-AAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATC----CAAGA
* * *
21094277 ACCAATTGAGAAACAATTCTCACGTAAATAA-ATTTTGATTCAAAGACAA
383 ACCAA--GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21094326 AAACTTTGTTGTTTCCAAAATG---AA-TATTTAGACCAAATGATGCTATCTCCGGAGAATGGAA
1 AAAC----TTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAA
* * *
21094387 TGTTCAGAAAATTGCTCGACGGAATGGATCGTCTTGAATACT-TGAAGGAACAGAAGTTATGAAA
62 TGTTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGT-AAGGAACCGAAGTTATAAAA
*
21094451 GAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCTTCCAAGAATC-AAGAGAGAAACAATTCTCAC
126 GAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAGAAACAATTCTCAC
* ** * *
21094515 GTAAATAAGTTTTTAATTCAAACAAAACAAATTTTTTTCACAAAATGACAAACTATTTAGACAAA
190 GTAAATAAGTTTTTAATTCAAAGACCA-AAACTTGTTT-ACAAAATGACAAACTATTTAGACAAA
** * * * * *
21094580 ATGATGCAATTTCCCGAGCATGGAATGTTTGGAAAATTGCTCGAAGGAATGGACCATCTTGAATA
253 ATGATGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATA
* * * * * * *
21094645 CTTTATGGAACTGAAA-TTATAAAAGAAGTCGTAAAAGTTT-AACAAGTTCGAATGTTCGTCAAA
318 CTGTAAGGAAC-CAAAGTTATAAAAGAACTCGTAAAAGTTTGAA-AAGTTCGAAAGTTCATCCAA
* * *
21094708 GAACTAAGAGTGAAACAATTCTCACGT-AATAAGTGTTTAATCCAAAGACCA
381 GAACCAAGA--GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
21094759 AAAGTTTTTTACAAAATGACAGACTATTTATACCAAATGATGCCATTTCTCGAGCAT-GTAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
* * * * * *
21094823 TCAAAAAAGTGCTCGAAGGAATGGATCATCTTGAATAATGTAAGGAGCCGAAGTTATAAAATAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
*
21094888 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAG-G-AACAATTCTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * * *
21094951 TAAGTTTTTGATTCAAAGACCAAAACTTGTTTCCAAAGTGA-AGAACTATTTCGACTAAATGTTA
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACAAAATGAT-
* * * * * * * * * * *
21095015 CT-ATCTCCCGAGAAT-GAATGTTCAGAAAATTGATCGAAGGAATGCATCATC-TGAATGCTTTA
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * ** *
21095077 AGGAGCCGAAGTTATGAAAGAACTCGTAAAAGTTTGACCAGTTCGAAAGTTCTTCCAAGAACCAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-A
*
21095142 GAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTC-AAGCAACA
387 -AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAG-ACCA
* * * * *
21095187 AAACTTTTTTAGAAAAAATGACAAACTATTTAGACCAAATGATGCGA--TCCC-AGCATGGAATA
1 AAACTTGTTT--ACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATG
** * *
21095249 TTTGGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACAT-TATGGAACTGAA-TTATAAAAGA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATAC-TGTAAGGAACCGAAGTTATAAAAGA
* * * * * *
21095312 ACTCGCAAAAGTTTAACAAGTTTGAAAGTTCGTCCAAGAACCAAAAGACAAAAAAAATTCTCACG
128 ACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-C-AAAGAGAGAAACAATTCTCACG
* * * *
21095377 TAAATAAGTATGTAATTCAAAGACC-AAACTTTTTTACAAAATGACAAACAATTTAGA-AAAATG
191 TAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATG
* * * * * * * *
21095440 ATGCGATTTTCCGAGCATAGAATGTTTAGAAAGTTGCTCGAAGGAATGTATCGTCTTGAATATTG
256 ATGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTG
* ** ** *
21095505 TAAGG-A--GAAGTTATAAAAGAACTCGTAAAA-TTTGACTAGTTC-AGAAGTTTTTCTAAGAAC
321 TAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAAC
* * * * *
21095565 CAAGAGAGAAACAATTCTCATGTAAAAAAATTCTTTTAATTCAAACACAA
385 C-A-AGAGAAACAATTCTCACGT-AAATAAGT-TTTTAATTCAAAGACCA
* * * ** *
21095615 AAACTTGTTTACAAAATGACAAACTAATTATG-CCAAATGATGTGATTTCCCGATTATGGAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTA-GACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * * * * * *
21095679 TCGGAAAATAGCTTGAAGG-AGGGA-CTGTCTTGAATACTTTAAGGAACTGAAGTTGTAAAAGAA
65 TCAGAAAATTGCTCGAAGGAATGGATC-GTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
** * * * * *
21095742 CTCGTAAAAGTTTGATTAGTTCGGAAG-TCGTCCAAAGAAACAAAGGGAG-AGCAATCCTCAAGT
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCC-AAG-AACAAAGAGAGAAACAATTCTCACGT
* * * *
21095805 AAATAGGTGTTTAATTCAAAGACCAAAA-GTATTTACAAAATGACAAACTATTTAGAGC-AAATG
192 AAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGA-CAAAATG
* * * *
21095868 ATGCGATTTCCCGAGCATGGAATGTTGA-AAAATTGCTCGAAA-GAATGAATCGTCTTGAATACT
256 ATGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTC-AAAGGAATGGATCGTCTTGAATACT
* * * * * **
21095931 GTAAGAAACC-GAGTTATAAAAGAACTCGTAAAAG-TTGAAAAGTTCGGAAGTTCATGCAATAGT
320 GTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAAC
* *
21095994 CAAGAGAAACAATTCTCACGTAAATAAGTTTTCT-TTTTAAAGACCA
385 CAAGAGAAACAATTCTCACGTAAATAAGTTTT-TAATTCAAAGACCA
* * * * * * *
21096040 AAACTTGTTTACAAAATGAAAAACTATTTTGACTAAATGATGCTATTTCCCAAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * *
21096105 TA-CAAATTGCTC-AATGGAATGGATCGTCTTGAATACT-TTAGGAACCGAAGTTATAAAAAAAC
66 CAGAAAATTGCTCGAA-GGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * **
21096167 TTGTAAAAGTTTGACAAGTTTGGAAG-TCTGTCCAAGAACCGAGAGAGAAACAATTCTCACGTAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTC-GTCCAAGAACAAAGAGAGAAACAATTCTCACGTAA
* * * *
21096231 ATAAGTATTTAATTCAAAGACCAAAACTTGTTTACAAAAGGACAAACAATTTAGA-AAAATGAAG
194 ATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* ** * ******************************
21096295 CGATTTTTCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
259 TGATTTCCCAAG-----------------------CATGGAATGTTTAGAAAATTGCTCAAAGGA
*********************************************** *
21096360 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAAAGTTTGACAAGTT
301 ATGGATCGTCTTGAATACTGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTT
* * * * *
21096425 TGGAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCATGTAAATAAGTTTTT-ATTCAAAGAC
366 CGAAAGTTCATCCAAGAAC-CA-AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGAC
21096489 CA
429 CA
* * * * *
21096491 AAACTTGTTTAC-AAATGACAAACAATTTAGACCAAATGATACGAGTTCCCGAGCATGGGAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCAT-AGAATGT
* * * * *
21096555 TTAG-AAATTGCTCGAATGAAAGGATCGTCTTGAATACTTTAAGGAATCG-AGTGTA-AAAACGA
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGT-TATAAAA-GA
* * **
21096617 ACTCGT-AAAGTTGGACAAGTTCAAAAGTTCGTCCAAGAATTAAG-G-GAAACAATTCTCACGTA
128 ACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTA
* * * * * *
21096679 AATAAGTTTTTGATTTTAAAGACCAAAACTTGTTTACAAAATGGCAATCTATTTAGACCAAATTA
193 AATAAGTTTTT-AATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGA
* * * * * * * * * *
21096744 TGCGATTTCCCGAGAATGTAATGTTCAGAAAATTTGCTCGAA-GAGTCGATCATCTTGAATACTT
257 TGTGATTTCCCAAGCATGGAATGTTTAGAAAA-TTGCTCAAAGGAATGGATCGTCTTGAATACTG
* * * * * * *
21096808 TAAGGAATCGATGTTATAAAAGAATTC-TTAAAGTTTGACAAGTTC-AGAAGTTCGTCCAAGAAC
321 TAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAAC
* * *
21096871 CAAGAGAAGCAATTCTCACGTAAAAAAGTTTTTGATTCAAAGACCAA
385 CAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-A
* ** * * * ** *
21096918 AAACTAGTTTACAAAATGAC-AACTAAATAGACAAAATGATGAGACTTCCCAATAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * ** *
21096982 CAGAAAA-TGCTCAAAGG-ATGGATCGAAAGAGCTCGTAAGTTTTACAGTTCGGAAATTCGTCCA
66 CAGAAAATTGCTCGAAGGAATGGATC----G-TCTTG-AA----TACTGTAAGG-AA--C--CGA
* * * ** * **
21097045 A-TAACCAAGAGAGAAAAATTCTCACGTAAAGAATGTTTAAATTCAAGACCAAAAGTTTTTTCCA
116 AGTTA-TAA-A-AG---AA--CT--CGT-AA-AA-GTTT-GA--CAAGTTCGAAAG-TTCGTCC-
* * * * * * ** * ** **
21097109 AAAGGACAAACTATTTAG-ACCAATTGAT-GCG-ATTTCCCGAGCGTGGAATGTTCAGAAAATTG
163 -AAGAACAAA-GA--GAGAAACAATT-CTCACGTAAAT---AAGTTTTTAA--TTC---AAA--G
* * * * * * * *
21097171 CTCCAAGGAA-TGGATCGTCTTGA-ATACTGTA-AGGAACCGAAGTTATAAATGAACACATAAAA
213 -ACCAA--AACT---T-GT-TT-ACAAAATG-ACA--AA-C-TA-TT-TAGA-CAA-A-AT-GAT
** ** *** *** *** **
21097233 GT--TTTGACAAGTTTGGAA-GTTTATCCAAGAAC-CAAGAGAGAAACAATTC-TCACGTAAAAA
258 GTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAA-AG-GAATGGA-TCGT--C-T--TGA
* * * * * * * *
21097293 AGTTTTTAATTTAAAAGGCAA--AAACTTTTTACAA-AA-T-GACAAACAATTTAGAAAAATAAT
315 A-----TACTGT--AAGG-AACCAAA-GTTATAAAAGAACTCG-TAAA-AGTTT-GAAAAGT--T
** * **** * ** * * * *
21097353 GCG-ATTTTCGA-GCATAGAA-TGTTAG-AA-AGTTGCT--CG-AAGGAA-TGTATCA-TCTGAA
366 -CGAAAGTTC-ATCCA-AGAACCAAGAGAAACAATT-CTCACGTAAATAAGTTTTTAATTC-AAA
21097408 G-CTGCA
426 GAC--CA
* * * * ** * * *
21097414 GGGAA-TCGGAGTTATAAAA-GAACTCAATAAAAGTTT-G--AAAA-G-TTCGGAAGTTTGTCCA
1 --AAACT-TG-TTTACAAAATG-A--CAA-ACTA-TTTAGACAAAATGATGC-G-A-TTT-CCCG
* * * * * ** * * *
21097472 AG-A-ACCAA-G---AGAAACAATT-CTC-ACGTAAATAAGTTTTTGATTCAAATAC--CAA--A
53 AGCATA-GAATGTTCAG-AA-AATTGCTCGAAG-GAAT-GGATCGT-CTT-GAATACTGTAAGGA
** ** * * * ** * * *
21097525 A-C-TTGTT-TCCAA-AA-T-G-ACAAACTATTTAGACCAAATGCTGCTATTTC--CCGAGAATG
111 ACCGAAGTTATAAAAGAACTCGTA-AAA--GTTT-GA-CAAGTTC-GAAAGTTCGTCCAAGAA-C
** * * * * * ** * **
21097581 AAATGTTCA-AAA-AATTGCTCAAAGGAATGGATCA-TCTTGAATACTTTAAG---AAACCGAGT
169 AAA-G-AGAGAAACAATT-CTC-ACGTAA---ATAAGTTTTTAAT--TCAAAGACCAAAACTTGT
** * ** * ** *
21097640 TATGA-AAGAACTGGTAAA--AGTTT-GAC--AA-GTTCGAAAGTTCGTCCAAG-A-ACAA-G-A
225 T-T-ACAA-AA-TGACAAACTA-TTTAGACAAAATGAT-GTGATTTC--CCAAGCATGGAATGTT
* * * * * * * ** * * *
21097694 GAGAAATAATT-CTC-ACGTAA---ATAAGTTTTTAAT--T-CAAACAACAAAACCTTTTTACAA
282 TAG-AA-AATTGCTCAAAGGAATGGAT-CGTCTTGAATACTGTAAGGAACCAAA--GTTATA-AA
** ** ** ** * ** * *
21097751 ATGACAAACTATTTAGACCAAATGAATGCGATTTCTCGAGCATGGAATTCGA-AAAATAGCTCGA
341 A-G---AACT-CGT--A--AAA-GTTTGAAAAGT-TCGA--A---AGTTC-ATCCAAGAAC-C-A
*** * * * * * * * **
21097815 AGAGAATGGA-T-TGACTTGAAT-ACTTTATGGAA-CCGAAATTATAAA
387 AGAGAAACAATTCTCACGTAAATAAGTTT-T-TAATTC-AAA-GA-CCA
** ** ** * ** * ** *
21097860 AGAACTTGTAAAAGTTTGAGAAATCGA-AAGTTCATCCAAGAACTAAAAGGAAACAAGCTCACGT
1 A-AACTTGT-----TTACA-AAAT-GACAAACT-AT-TTAG-AC-AAAATGATGCGATTTCCCG-
* * * * ** ** * *
21097924 A-AATA-AGTGTTTAATTCAAAGACCAAAAGTTGTGTACAAAATAA-CAAAC-TATTTAGACA-A
53 AGCATAGAATG-----TTC--AG---AAAA-TTG-CT-CGAAGGAATGGATCGT-CTT-GA-ATA
* * * * * * * * * * *
21097984 ATGATGATGCGATTTCCCG-AG-CATGGAATG--TTCG-AAAA-ATTGCTCGAAG---GAATGGA
102 CTG-T-AAG-GA---ACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTG-AC-AAGTTCGAA-AGT
** * *** * * * * ** * **
21098040 TCGT-CTTGAATACTTTA-AGAAACCAAAGT-T-A--TAAAAGAACTCATAAAATTTGAAAAGTT
157 TCGTCCAAGAACA-AAGAGAGAAA-C-AATTCTCACGT-AAATAAGT-TTTTAA-TT-CAAAGAC
* * ** * * * * ** * ** *
21098099 CAATAGTTCGTCAAAGAACCAAGAGAGAAAC-ATTCT-CACGTAAT-AAGTTTTTAATCCAAAGA
215 CAAAACTT-GT-TTACAA--AA-TGACAAACTATT-TAGACAAAATGATGTGATT--TCCCAAG-
* *** * ** * * ** ** **** * * * *
21098161 CCAAAAGTTTTTTTTTTTACAAA-TGACACACA-CTATTTATACCAAATGATGTCATTTCCTGAG
271 -C--ATG-GAATGTTTAGA-AAATTG-CTCAAAGGAATGGAT-CGTCTTGA-AT-A-CT-GTAAG
* *** * * *** * * *
21098224 CATGTAATGTTTAGAAAATTGCTCGAATGAATGGATTGTCTTGAATAATGTAAGGAACCAAAGTT
325 GAACCAAAG-TTATAAAAGAACTCG--T-AA---A-AGT-TTGAA-AA-GT-----TCGAAAGTT
** * * * ** * *** **** *** *
21098289 -ATAAAAGAAATCGGAAAAGTTTAACAAGTTCGGAAGTTCGTCCAAG-CACCAAGAGAAACCATT
374 CATCCAAG-AA-C-CAAGAG--AAACAA-TTCTCACGTAAAT--AAGTTTTTAATTCAAA-GA--
21098352 CTCA
428 C-CA
* * * **
21098356 TGTAATAATT-TTTGATTC-AAA-GGCAAAACTTGTTTCCAAAATGA-AGAACTATTTAGACCAA
1 ---AA-ACTTGTTT-A--CAAAATGAC-AAAC-TATTT-----A-GACA-AA--ATGA-------
* * * * * *
21098417 ATGCTGCTATCTCCCGAG-ATGGAATGTTCAG-AAAGTGCTCGAAGGCATGGATCATCTTGAATG
41 -TGC-G--ATTTCCCGAGCATAGAATGTTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATA
* *
21098480 CTTTAAGGAACCGAAGTTAT-AAAGAACT-GTAAAAGTTTGACAAGTTCGAAAGTTCTTCCAAGA
102 CTGTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGA
* *
21098543 ACCAAGAGAGAAACAATTCTTACGT--ATAAGTTTTTTAATTCCCAAGAGAGAAACAATTCTTAC
167 ACAAAGAGAGAAACAATTCTCACGTAAATAAG-TTTTTAATT--C-A-A-AG--AC----C--A-
* * ** * ** ** ** * *
21098606 GTAACTAAGTTTTTAATTCAATCAACAAGACT-TTTTTACAAATAACAAACT-ATTAGACCAAAT
217 -AAACT-TGTTTACAA---AAT-GACAA-ACTATTTAGAC-AA-AATGATGTGATT--TCC-CA-
* * * *
21098669 GATGCGATTTCCGAGCATGGAATGTTTTA-AAAATTGATCGAAGGAATGGATCGTCTTGAATACA
269 -A-GC-A--T--G-GAAT-GT-----TTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATAC-
* ** * * *
21098733 T-TATGGAACTGAA-TTATAAAAGAACTCGTAAAAAG-TTGACAAGTTCGGAAGTTCGTCCAAGA
319 TGTAAGGAACCAAAGTTATAAAAGAACTCGT-AAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGA
* * * * *
21098795 ACCACAATAGAAACAACTCTCACGTAAATAAGTATGTAATTCGAAGACCA
383 A-C-CAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * ** *
21098845 AAACTTTTTTACAAAATGACAAACAATTTAGA-AAAATGATACGATTTTCTAAGCA-A-AATATT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * * * *
21098907 TAGAAAGTTGCTCCAAGGAATGTATCGTCTTG-ATATTGTAAGGAACCGAATTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * * * * *
21098971 CGT-AAATTTTGATAAGTTCAAAAGTTTGTCTAAGAACCAAGAGAGAAACAATTCTCA-GTAAAA
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * * *
21099034 AAGTTCTTTTAATTCAAA-CCACAAAACTTGTTCACAAAATGATAAACTATTTATAC-CAATAAT
196 AAG-T-TTTTAATTCAAAGAC-CAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* * *** ** * * *
21099097 GCGATTTCCCGAA-CATGGAATG-TTCGAAAATAATTTGAAGGAGTGGATTGTCTTGAATACTTT
258 GTGATTTCCC-AAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * ** *
21099160 AAGGAACC-GAGTTGTAAAAG-ACTCGTAAAAGTTTGATTAGTTTCGAAAGTTCATCAAAGAACC
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAG-TTCGAAAGTTCATCCAAGAACC
* *
21099223 AAG-GAGAACAATCCTCACGTAAATAAG-TTTTAATTCAAAGA-CT
386 AAGAGA-AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
21099266 AAAGTTGTTTACACAATTGACAAACTATTCAGACACCAAAATTGATGCAATTTCTCGAGCATGGA
1 AAACTTGTTTACA-AAATGACAAACTATTTAG--A-CAAAA-TGATGCGATTTCCCGAGCATAGA
* *
21099331 ATGTTC-GAAAAATTGCTCGAAGGAATGGATCGTCTTAAATACTATAAGGAACC-AAGTTATAAA
61 ATGTTCAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAA
* * * * * * *
21099394 ATAACTCAT-AATGTTTGA-AAGTTCGGAAGTTCATCCAAGAGC-CA-AGAGAAACAATTCTCAC
125 AGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCAC
* * *
21099455 GTAAATAAGTTTTCATTCATTTTAAGAGACCAAAACTTGTTTACAAAATGAAAAACTATTTAGAC
190 GTAAATAAG-TTT--TT-AATTCAA-AGACCAAAACTTGTTTACAAAATGACAAACTATTTAGAC
* * * * * * *
21099520 TAAATGATGCGA-TTCCCGAGAATAGAAT-TTTCA-AAAATTGCTC-AATGAATGGATCGTTTTG
250 AAAATGATGTGATTTCCCAAGCATGGAATGTTT-AGAAAATTGCTCAAAGGAATGGATCGTCTTG
* * * *
21099581 AATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT-AAAGTTTGACAAGTT-GGAAGTTCATCC
314 AATACTGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCC
* * *
21099644 AAGAACCGAGAGAGAAAC-ACTCTCACGTAAATAAGTATTGAATTCAAAGACCA
379 AAGAACC-A-AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * **
21099697 AAACTTGTTTACACAAAAGGACAAA-TAATTTA-AAAAAATGATGTGATTTTTTCGAGCATAGAA
1 AAACTTGTTT--ACAAAATGACAAACT-ATTTAGACAAAATGATGCGA-TTTCCCGAGCATAGAA
* * * * * *
21099760 TGTTTAGAAAGTTTGCTCGAAGGAATGTACCATCTTGAATAATGTAAGGAACCGAAGTTATAAAA
62 TGTTCAGAAA-ATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAA
* * * * * *
21099825 GAACTCGTAAATGCTTGACAAGTTTCGGAAGTTCAT-CAAGAAC-CA-CGAGAAACAATTCTCAC
126 GAACTCGTAAAAGTTTGACAAG-TTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCAC
* * * * *
21099887 GTAAAT--TTTTTTGATTTAAAGA-CAAAACCTTGTTTCCAAAATGAC-AACT-TTTAGACCAAA
190 GTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAA
* * * * * * * * *
21099947 TGCTGTTATTTTTCCCGAGAACGG-ATGTTCAAAAAATTGATCAAAGGAATGGATCATCTTG-AT
254 TGATGTGA--TTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAAT
* * * * **
21100010 A-TTTAAGGAATCGAAGTTATGAAAAGAACTCATAAAAGTTTGACCAGTTCGAAAGTTCATCCAA
317 ACTGTAAGGAACCAAAGTTAT-AAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAA
* * **
21100074 GAACCAAGAGACAAACAACTCTCACGTAAATAAGTTTTTAATTCAAACAATA
381 GAACCAAGAG--AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * *
21100126 AAACTTTTTTATAAAATGACAAACTTTTTAGACCAAATAATGCCATTTCCCAATGCAT-GAATAT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGA-GCATAGAATGT
* * * * * *
21100190 TCAGAAAACTGCTCAAAGGAATGGATCGTCTTGAATACTTTATGGAACTGATA-TTATAAAA-AG
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGA-AGTTATAAAAGAA
* * * * *
21100253 CTCGTAAAAGTTTGACAGGTTTGGAAGTTCATCC-AGAACCAAA-AGAGAAAC-ATTCTCACAT-
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAGAAACAATTCTCACGTA
* * * * * *
21100314 AATGAGTATTTAATTCAAATACAAAAACTTGTTTACAAAAGGACAAACAATTTAGA-AAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGAT
* **** * ** * * *
21100378 GCGATTTTTTGAGCATAG-ATGTTTAAGAATGTTGCTCGAAGGAATGTATCGTCTTGAATACGGT
258 GTGATTTCCCAAGCATGGAATGTTT-AGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * * * *
21100442 AAGGAA-TAGAAGTT-TATAAAGAACACGTAAATGTTTGACAGGTTC-AGAAGTTCAT-CAAGAA
322 AAGGAACCA-AAGTTATA-AAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAA
*
21100503 CCAAGAGAAACAATTCTC-CGTAAATAAGTTTTTTTATTCAAAGACCA
384 CCAAGAGAAACAATTCTCACGTAAATAAG-TTTTTAATTCAAAGACCA
* * * * * * *
21100550 AAATTTGTTT-CCAAATGACAAACT-TCTT-GAACCAAATGCTGCTATTTCCCGAGAATGGAATG
1 AAACTTGTTTACAAAATGACAAACTAT-TTAG-ACAAAATGATGCGATTTCCCGAGCATAGAATG
* * * ** * *
21100612 TTTAG-AAATTGCTCGAAGGAATGGATCGTCTTCAATACTTTAAGGAATTGAAGTGATGAAAGAA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * * * ** *
21100676 CTCATAAAATTTTTGACCAGTTCAAAAGTTCGTGTAAGATC-AAGAGAGAAACAATTCTCACGTA
129 CTCGTAAAA-GTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTA
* * * * * *
21100740 AATAAG-TTTTAATTCAAACACC-AAACTTTTTTATTACAAAATGACACATTATTTATATAAAAT
193 AATAAGTTTTTAATTCAAAGACCAAAAC--TTGT-TTACAAAATGACAAACTATTTAGACAAAAT
* ** * * * *
21100803 GATGTCATTTCCTGATCATGTAATGTTTAG-AAATTGCTCGAAGGAATGGATCGTCTTGAATAAT
255 GATGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACT
* * * * *
21100867 GTAAGGAACCAAATTTAT-AAACAACTCGTAAAAGTTTGACACAGTTCGGAAGTTCGTCCAAGAA
320 GTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGA-AAAGTTCGAAAGTTCATCCAAGAA
* * * *
21100931 CAAAGAGAAGCAATTCTCACGTAAATAAAATTTTTGATTCAAAGACCA
384 CCAAGAGAAACAATTCTCACGTAAAT-AAGTTTTTAATTCAAAGACCA
* * * * * * * *
21100979 AAACTTGTTT-CTAAAATGA-GAACTATTTAGACCAAATGCTACTATCTCCCGAGAATGGAATGT
1 AAACTTGTTTAC-AAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* ** * *
21101042 TCAG-AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAGTCGAAGGT-T-CAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* *
21101104 TCGT-AAAGTTTGACCAGTTCAAAAGTTCGT-C-----C--A-AGAGAAACAATTCTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * * *
21101159 TAAGTGTTT-ATTCAAAGAACC-AAAGTTATTCACAAAATAACAAACTATTTAGACCAAATGATG
195 TAAGTTTTTAATTCAAAG-ACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * * * *
21101222 CGATTTCCCGAGCATGGAATGTTTGAAAAAATTGC-CTAAGGAATGGATCGTCTTGAATACTCTA
259 TGATTTCCCAAGCATGGAATGTTT-AGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* ** * * * *
21101286 AGAAACTGAAGTTATAAAAGAACTCATAAAAGTTTGAAAAGTTCGGAAGTTCGTCAAAGAACCAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-A
* * * *
21101351 AGAGAAACAATTTTCACGT-AATAAGTGTTTTGTAAAATCCAAGATCA
387 AGAGAAACAATTCTCACGTAAATAA--GTTTT-T-AATTCAAAGACCA
* * * * *
21101398 AAAGTTTTTTAC-AAATGACACACTA-TTATACAAAATGATGTC-ATTTCCCGAGCATGGAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG-CGATTTCCCGAGCATAGAATGT
* * * * *
21101460 TTAGAAAATTGCTCGATGGAATGGATTGTCTTGAATA-AGTAAGGAACTGAAGTTATAAAA-AAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * *
21101523 TCAT-AAAGTTTGACAAGTTCGGAAGTTCGTTCAACAAC-CA-AGAG-AACAATTCTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * *
21101584 TAAATTTTTGATTCACAGACCAAAACTTGTTTCCAAAATGA-AGAACTATTTAGACCAAATGATG
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACAAAATGATG
* * * * * * * * *
21101648 CT-ATCTT-CCGAGAATGAAATGTTCA-TAAATTGCT-GAAGAAATGGATCGTCTTGAATGCTTT
259 -TGAT-TTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * * ** * * *
21101709 AAGGAGCCGAAGTTATGAAAGAACTCGTAAAAGTTTGATCATTTCAAAAGTTTATCCAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-
* *
21101774 AGAGAGAAACAATTCTCAC----ATAAGTTTTTAATTCAAAAAACA
386 A-AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
21101816 AAACTTTTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCC-AGCAT-GAAATGT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AATGT
* * *
21101879 TC-GAAAAATTGCTCGAAGGAATGGATCGTCTTGAGTACTCT-AGAAAACCGAAGTTATAAAAGA
65 TCAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAG-GAACCGAAGTTATAAAAGA
* * *
21101942 ACTCGTAAAAGTTTG---AG---G-AACTTCGT-CAAGAACCAATAGAGAAACAATTCTCACGT-
128 ACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTA
* * * * * *
21101998 AATAAGTGTTTTAATCCAAAGA-CAAAAGTTTTTTTACAAAATGACATACTATTTATACCAAATG
193 AATAAGT-TTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATG
* * * * * *
21102062 ATG-CATTTCCCGAGCATGTAAT-TTTAGAAAATTGCTCGAAGGAATGGATCGTCTTGAGTACTC
256 ATGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTG
* * * * * * *
21102125 TAAGAAACCGAAGTTAT-AAAGAACTCGTAAAAG-TTGAAAAGTTTGGAACTTCGTCAAAGAACC
321 TAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC
* *
21102188 AATTGAGAAACAATTCTCACGTAAATAAATTTTTGATTCAAAGA-CA
386 AA--GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * *
21102234 CAACTTG-TTCCAAAATGA-ATA-T-TTTAGACCAAATGATGCTATCTCCGGAG-ATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21102294 CAGAAAATTGCTCG-ACGAATGGATCGTCTTGAATACT-TGAAGGAACAGAAGTT-TATGAAGAA
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGT-AAGGAACCGAAGTTATA-AAAGAA
*
21102356 CTCGT-AAAGTTTGACAAGTTCGAAAGTTCTTCCAAGAATC-AAGAGAGAAACAATTCTCACGTA
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGAGAAACAATTCTCACGTA
* * * *
21102419 AAT-AGTTTTTAATTCAAACAAC-AAATTTTTTTCACAAAATGACAAACTATTTAGACAAAATGA
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTT-ACAAAATGACAAACTATTTAGACAAAATGA
** * * * * *
21102482 TGCAATTTCCCGAGCATGGAATGTTT-GAAAATTGCTCGAAGGAATGGACCATCTTGAATACTTT
257 TGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
* * * * * *
21102546 ATGGAACGAAA-TTATAAAAGAAGTCGTAAAAGTTT-AACAAGTTCGAATGTTCGTCAAAGAA-C
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAA-AAGTTCGAAAGTTCATCCAAGAACC
* *
21102608 AAGAGTGAAACAATTCTCACGT-AATAAGGTTTTAATCCAAAGACCA
386 AAGA--GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
** * * * * * *
21102654 AAGTTTTTTTAAACAAAATGACAGACTATTTATAC-CAATGATGCCATTTCTCGAGCAT-GTAAT
1 AAACTTGTTT--ACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAG-AAT
* * * * * *
21102717 GTTCAAAAAAGTGCTCGAAGGAATGGATCATCTTGAATAATGTAAGGAGCCGAAGTTATAAAATA
63 GTTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGA
*
21102782 ACTCGTAAAAAGTTTGACAAGTTCGTAAGTTCGTCCAAGAAC--A-A-AGAAACAATTCTCACGT
128 ACTCGT-AAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGT
* * * * *
21102843 AAATAAGTTTTTGATTCAAAGACCAAAAC-TGTTT-CCAAATGA-GAACTATTTCGACTAAATG-
192 AAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGA
* * * * * * * * *
21102904 T-T-ACTATCCTCCGAGAATGGAATGTTCAGAAAATTGATCGAAGGAATGCATCATCTTGAATGC
257 TGTGA-T-TTC-CCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATAC
* * * * ** *
21102967 T-TTAGGAGCCGAAGTTATGAAAGAACTCGTAAAAGTTTGACCAGTTCGAAAGTTCTTCCAAGAA
319 TGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAA
*
21103031 CCAAGAGAAACAATTCTCACGTAAATAAGTTTTTTAATTC-AAGCAACA
384 CCAAGAGAAACAATTCTCACGTAAATAAG-TTTTTAATTCAAAG-ACCA
* * * * *
21103079 AAACTTTTTTAGAAAATGACAAACTATTTAGACCAAATGATGCGA-TTCCC-A-CATGGAATATT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
** * *
21103141 TGGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACAT-TATGGAACTGAA-TTAT-AAAGAAC
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATAC-TGTAAGGAACCGAAGTTATAAAAGAAC
* * * *
21103203 TCGCAAAAGTTTAACAAGTT-GAAAGTTCGTCCAAGAACCAAA-AGACAAAAAAATTCTCTCACG
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAAGAGA-GAAACAA-T-TCTCACG
* * * *
21103266 TAAATAAGTATGTAATTCAAAGACCAAAACTTTTTTACAAAATGACAAACAATTTAGA-AAAATG
191 TAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATG
* * * * * * * *
21103330 ATGCGATTTTCCGAGCATAGAATGTTTAGAAAGTTGCTCGAAGGAATGTATCGTCTTGAATATTG
256 ATGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTG
* * ** ** *
21103395 TAAGG-A--GAAGTTATAAAAGAACTCGTAAAATTTTGACTAGTTC-AGAAGTTTTTCTAAGAAC
321 TAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGA-AAGTTCATCCAAGAAC
* * * * *
21103456 CAAGAGAGAAACAA-TCTCATGTAAAAAAATTCTTTTAATTC-AACACAA
385 C-A-AGAGAAACAATTCTCACGT-AAATAAGT-TTTTAATTCAAAGACCA
* * * ** *
21103504 AAACTTGTTTACAAAATGACAAACTAATTATG-CCAAATGATGTGATTTTTCCCGATTATGGAAT
1 AAACTTGTTTACAAAATGACAAACTATTTA-GACAAAATGATGCGA--TTTCCCGAGCATAGAAT
* * * * * *
21103568 GTTC-GAAAATAGCTTGAAGGAGT-GA-CTGTCTTGAATACTTTAAGGAACTGAAG-TGTAAAAG
63 GTTCAGAAAATTGCTCGAAGGAATGGATC-GTCTTGAATACTGTAAGGAACCGAAGTTATAAAAG
** * * * * * * *
21103629 AACTCGTAAAAGTTTGATTAGTTCGGAAGTTCGTCAAAGAAC-CAGGGAG-AGCAATCCTCAAGT
127 AACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGT
* * * *
21103692 AAATAGGTGTTTAATTCAAAGACCAAAAGTTATTTAC-AAATGACAAACTATTTAGAGGC-AAAT
192 AAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGA--CAAAAT
* * *
21103755 GATGCGATTTCCCGAGCATGGAATGTTT-GAAAAATTGCTCGAAA-GAATGAATCGTCTTGAATA
255 GATGTGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTC-AAAGGAATGGATCGTCTTGAATA
* * * *
21103818 CTGTAAGGAACC-GAGTTATAAAAGAACTCGT-AAAGTTTGAAAAGTTCGGAAGTTCATGCAATA
318 CTGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGA
** ** *
21103881 GTCAAGAGAAACAATTCTCACGTAAATAAGTTTTTCTTTTTAAAGACCA
383 ACCAAGAGAAACAATTCTCACGTAAATAAGTTTTT-AATTCAAAGACCA
* * * * *
21103930 AAACTTGTTTACAAAATGA-AAACTATTTTGACTAAATGATGCTATTTCCC-AGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATG-T
* * * *
21103993 TTA-CAAATTGCTC-AATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAAAA
65 TCAGAAAATTGCTCGAA-GGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAA
* * * **
21104056 CTTGTAAAAGTTTGACAAGTTTGGAAG-TCTGTCCAAGAACCGAGAGAGAAACAATTCTCACGTA
129 CTCGTAAAAGTTTGACAAGTTCGAAAGTTC-GTCCAAGAACAAAGAGAGAAACAATTCTCACGTA
* * *
21104120 AATAAGTATTTAATTCAAAGACCAAAACTTGTTTACAAAAAGGACAAACAATTTAG--AAAATGA
193 AATAAGTTTTTAATTCAAAGACCAAAACTTGTTTAC-AAAATGACAAACTATTTAGACAAAATGA
* * ** * * * * * *
21104183 AGCGATTTTTCGAGCGTAGAATGTTTAG-AAATTGCTCGAAGGAATGTATCGTCTTGAATAATGT
257 TGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT
** * * *
21104247 AAGGAACTGAAGTTATAAAAGAACTCGTAAATGTTTGACAAGTTCGGAAGTTCATCCAAGAACCA
322 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCA
* *
21104312 AGAG-AATAATTCTCACGT-AATAA-TTTTTGATTCAAAGACCA
387 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * ** * * *
21104353 AAACTTGATTCCAAAATGACAAACTATTTAGACCAAATCCTGCTATTTCCAGAGAATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21104418 CAGAAAATTGCTCGAA-GAATGGATCGTCTTGAATACTTTAAGGAATCGAAGTTATGAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * *
21104482 CGTAAAAGTTTGACCAGTTCG-AAGTTCATCCAAGAACCAAGAGAGAAACAA-TCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * *
21104545 AAGTTTTTTAATTCAAACAAC-AAACATT-TTTACATAATGAC-AACTATTTAGACCAAATGATG
196 AAG-TTTTTAATTCAAAGACCAAAAC-TTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * * * * * * * *
21104607 CGATTTCTCGAGCATGG-ATGTTCAGAAAATTGCTCGAAGGAATGGATCGCCTAGAATACTTTAT
259 TGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAA
* * *
21104671 GGAACCGAA-TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCG-AATTTCATCCAAGAACCAAA
324 GGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-AA
* * *
21104734 GAGAGAACAATTCTCACGTAAATAAGTATTTAATTCAAAAACTA
388 GAGA-AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21104778 AAATTTGTTTACAAAATGACAAAC-ATATAGACCAAATGATGCGATTTCCCAAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * *
21104842 CAAAAAATTGCTCGAAGG-ATGGATCGTCTTGAATACTCTAAGAAACCGAAGTTAT-AAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * ** * *
21104905 CATAAAAGTTTAACAAGTTTGAAAGTTCGTTAAAGAACCAAGAGAG--ATAATTCTCACGT-AAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * ** * ** *
21104967 ATGTGTTTAATCCAAAGACCAAAAGTT-TTTAACAAAATGACACTCTATTTATACCGAATGATGC
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTT-ACAAAATGACAAACTATTTAGACAAAATGATGT
* * * * * * * *
21105031 CATTACTCGAG-ATCG--T-CTTA-AATAA-TG-T--AAGG-ATCGA-AG--TT--ATA----AA
260 GATTTCCCAAGCATGGAATGTTTAGAA-AATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAA
* * *
21105077 -GAACTC---G---T---A-AA-------AA-TTTGACAAGTTCGGAAGTTCGTCCAAGAA-CAA
324 GGAAC-CAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAA
* * *
21105122 GAGAACCAATTCTCACGTAAATAAGTTTTTGATTCAAAGATCA
388 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * * *
21105165 AAACTAGTTTCCAAAATGA-AGACTATTTAGACCAAATGCTGCTATTTCCCGAGAATGGAGTGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * *
21105229 CAG-AAATTGCTCGAAGGAATGGATCGTCTTGAATGCTTTAAGGAACCAAAGTTATGAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * * *
21105293 CGTAAAAGTTTGACAAGTTCGAAAGTTCTTCCAAGAACCAAGAGAAAAACAATTCTCACATAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
**** * * * *
21105358 AAGTTTTTAATTCAAAGA--ATTTTTTTTTTTCAAAATGACAAACTATTTAGACCAAATGATGCC
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG-T
** ** * *
21105421 GATTT-CCAAGCATGGAATGTTCGGAAAATTGCTTGAAGGAATGGAT-GTCTTGAATACTTTATG
260 GATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAG
* * * * * *
21105484 GAACTGAAA-TTAT-AAAGAACTCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAAGCACCAAA
325 GAAC-CAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-AA
* *
21105547 GAGAAACAATTCTCACGTAAATAAGTATTTAATTCAAAAACCA
388 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
*
21105590 AAACTTGTTTACAAAATGACAAA-TAATTTAG--AAAATGATGCGATTTTCCGAGCATAGAATGT
1 AAACTTGTTTACAAAATGACAAACT-ATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * ** * *
21105652 TTAGAAAGTTGCTCGAAGGAATATATCATCTTGAATACTGTAAGGAACCGAAGTTACAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* ** *
21105717 TCGTAAAATTTTGACAAGTTC-AGAAGTTCGTATAAGAACTAAA-AGAGAAACAATTCTCATGTA
130 TCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAAC-AAAGAGAGAAACAATTCTCACGTA
* * *
21105780 AA-AAATTCTTTAATTCAAA-ACACAAAACTTGTTTACAAAATGACAAACTATTTATACCAAATG
193 AATAAGTT-TTTAATTCAAAGAC-CAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATG
* * * ** * * * * *
21105843 ATGCGATTTCCCGAGAATGGAATGTTCGGAAAATTGCTCGAATGAGTGGATTGTCTTGAATACTT
256 ATGTGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTG
* * * * * ** * ** *
21105908 TATGGAATCGAAGTTGTAAAAAAAACTCGTAAAAGTTTGACTAGTTCGGAAGTTTGTCAAAGAAC
321 TAAGGAACCAAAGTTAT-AAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAAC
* * *
21105973 CAAG-GAGAACAATCCTCGCGTAAATGAGTGTTTT-ATTCAAAGACC-
385 CAAGAGA-AACAATTCTCACGTAAATAAGT-TTTTAATTCAAAGACCA
*
21106018 AAACATTGTTTACAAAATGACAAACTATTTAGAGC-AAATGATGCGATTTCCCGAGCATGGAATG
1 AAAC-TTGTTTACAAAATGACAAACTATTTAGA-CAAAATGATGCGATTTCCCGAGCATAGAATG
* * *
21106082 TT-TGAAAAATTGCTCGAAAGAATGAATCGTCTTGAATACTGTAAGGAACCG-AGTTTATAAAAG
64 TTCAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAG-TTATAAAAG
* * * * * *
21106145 AACTCGTAAAAGTTTGAAAAAGTTCG-GAGTTCATGCAATAGTC----AGAGAAACAATTCTCAC
127 AACTCGTAAAAGTTTG-ACAAGTTCGAAAGTTCGTCCAAGA-ACAAAGAGAGAAACAATTCTCAC
** * * * *
21106205 GTAAATAAGTTTTTTTCGTTTTAAAGACC-AAACCTGTTTACAAAATGAAAAACTATTTAGACTA
190 GTAAATAAG--TTTTT-AATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAA
*** * * * **
21106269 AATGATACAATTTACCAGAGAATGGAATGTTCA-AAAATTGCTCATTGGAATGGATCGTCTTGAA
252 AATGATGTGATTTCCCA-AGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAA
* * * * * * *
21106333 TACTTTAAGGAATCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAA
316 TACTGTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAA
* *
21106398 GAATCGAGAGAGAAACAATTCTCACGTAAATAAGTATTTAATTCAAAGACCA
381 GAA-CCA-AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * **
21106450 AAACTTGTTTACAAAAGGACAAACAATTTAGA-AAAATGATGCAATTTTTCGAGCATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * *
21106514 TAGAAAGTTGCTCGAAGGAATGTATCGTCTTGAATAACCGTAAGG-A-C----TTATAAAA-AAC
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAAT-ACTGTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
21106572 TCGTAAATGTTTGACAAGTTCGGAAGTTCATACAAGAAC-CA-AGAGAAACAATTCTCAAGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * * * * * * *
21106635 TAAGTTTCTGATTCTAAGATCAAAACTTGTTTCCAAAATGAAAAACTATTTAGACCAAATGCTGC
195 TAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG-
* * * *
21106700 T-ATTTCCCGAGAATGGAATGTTCAAAAAATTGCTCAAAGGAATGGATCGTCTTGAATACT-TGA
259 TGATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGT-A
* * * *
21106763 AGGAACCGAAGTTATGAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCTTCCAAGAACCAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC-A
* * *
21106828 GAGAGAAACAATTTTCACGTAAATAAG-TTTTAATTCAAACAACA
387 -AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * ** *
21106872 AAACTTTTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTTTCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
** * * * * * *
21106937 TGGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTATGGAACTGAAATTATAAAACAAGT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* * *
21107002 AGTAAAAGTTTGACAAGTTCGAAAGTTCGT-CAAGAACCAAGAGAGAAACAATTCTCACAT-AAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * * * * * * * **
21107065 AAGTGTTTAATCCAAAGACCAAAAGTTTTTTATAGAATGACACACTATTTATACCAGATGATGCC
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGTG
* * * * * * *
21107130 ATTTCCCGAGCATGTAATGTTCAGAAAAATGCTCGAAGGAATGGATCGCCTTGAATAATGTAAGG
261 ATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAGG
* * * * *
21107195 AACCGAAGTTATAAAAAAACTTGTAAAAGTTTGACAAGTTCGGAAGTTC-TCC-AGAACCAAGAG
326 AACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAGAG
* * *
21107258 AAATAGTTCTCACGTAAATAAGTTTTTGATTCAAAGACCA
391 AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
21107298 AAACTTGTTTCCAAAATGA-AGAACTATTTAGACCAAATGCTGCTATTTCCCGAGAATGGAATGT
1 AAACTTGTTTACAAAATGACA-AACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGT
* * * * *
21107362 TCAGAAAATTGCTCTAAGGAATGGATTGTCTTGAATGCTTTAAGGAACCGAAGTTATGAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAAC
* * *
21107427 ACGTAAAAGTTTGACAAGTTCGAAAGTTCTTCCAAGAACTAAGAGAGAAACAATTCTCACGTAAA
130 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAA
* * *
21107492 TAAGTTTTTAATTCAAACAACAAAACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATG
195 TAAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACAAAATGATG
* * * * *
21107556 CGATTTCTCGAGCATGGAATGTTT-GAAAAATTGCTCGAAGGAATGGAT-GTCTTGAATACTTTA
259 TGATTTCCCAAGCATGGAATGTTTAG-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTA
* * * * * *
21107619 TGGAACTAAAATTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAA
323 AGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACC--
* * * *
21107684 AAGAGAAATAATGCTCACGTAAATAAGTATTTAATTCAAAGAGCA
386 AAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
21107729 AAGCTTGTTTGCAAAATGACAAACAATTTAGA-AAAATGATGAGATTTTCCGAGCATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
* * * *
21107793 TAGAAAGTTGCTCGAAGGAATGTATCGTCTTGAATATTGTAAGGAACCGAAGTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
* *
21107858 CGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAAC-CA-AGAGAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
* * * * * * *
21107921 AAGTTTTTGATTCAAAGACCAAAACTTGTTTCCAAAATGACAAATTATTTAGACCAAACGCTGTT
196 AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGTG
* * * * * * *
21107986 ATTTCCCGAGAATGGAATGTTCAAAAAATTGTTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
261 ATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAGG
* * * ** ** *
21108051 AATCAAAGTTATGAAAGAACTCGTAATAGTTTGACCAGTTCGAAAGTTTGTCCATGAACCAAGAG
326 AACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAGAG
21108116 A
391 A
21108117 GAAACTACAT
Statistics
Matches: 30870, Mismatches: 6052, Indels: 4843
0.74 0.14 0.12
Matches are distributed among these distances:
386 17 0.00
387 118 0.00
388 53 0.00
389 47 0.00
390 36 0.00
391 18 0.00
392 1 0.00
393 3 0.00
394 4 0.00
395 1 0.00
397 6 0.00
398 29 0.00
399 216 0.01
400 57 0.00
401 664 0.02
402 188 0.01
403 111 0.00
404 90 0.00
405 62 0.00
406 71 0.00
407 96 0.00
408 57 0.00
409 155 0.01
410 68 0.00
411 223 0.01
412 209 0.01
413 195 0.01
414 280 0.01
415 385 0.01
416 267 0.01
417 452 0.01
418 528 0.02
419 662 0.02
420 560 0.02
421 509 0.02
422 1037 0.03
423 949 0.03
424 1779 0.06
425 2041 0.07
426 1946 0.06
427 1857 0.06
428 2987 0.10
429 3535 0.11
430 2674 0.09
431 1595 0.05
432 764 0.02
433 697 0.02
434 138 0.00
435 31 0.00
436 59 0.00
437 81 0.00
438 75 0.00
439 76 0.00
440 22 0.00
441 22 0.00
442 31 0.00
443 25 0.00
444 16 0.00
445 31 0.00
446 25 0.00
447 41 0.00
448 18 0.00
449 69 0.00
450 118 0.00
451 146 0.00
452 72 0.00
453 36 0.00
454 28 0.00
455 34 0.00
456 28 0.00
457 24 0.00
458 11 0.00
459 6 0.00
460 13 0.00
461 8 0.00
462 52 0.00
463 136 0.00
464 39 0.00
465 45 0.00
466 25 0.00
467 14 0.00
468 19 0.00
469 26 0.00
470 15 0.00
471 22 0.00
472 14 0.00
473 14 0.00
474 9 0.00
475 12 0.00
476 15 0.00
477 13 0.00
478 13 0.00
479 8 0.00
480 4 0.00
481 9 0.00
482 15 0.00
483 26 0.00
484 29 0.00
485 22 0.00
486 36 0.00
487 8 0.00
488 11 0.00
489 21 0.00
490 24 0.00
491 25 0.00
492 39 0.00
493 31 0.00
494 49 0.00
495 20 0.00
496 35 0.00
497 43 0.00
498 38 0.00
499 38 0.00
500 19 0.00
501 19 0.00
502 17 0.00
503 13 0.00
504 6 0.00
505 11 0.00
506 14 0.00
507 11 0.00
508 8 0.00
509 13 0.00
510 19 0.00
511 1 0.00
512 12 0.00
513 3 0.00
514 7 0.00
515 1 0.00
516 2 0.00
517 37 0.00
518 17 0.00
519 41 0.00
520 2 0.00
ACGTcount: A:0.40, C:0.15, G:0.17, T:0.28
Consensus pattern (430 bp):
AAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGATTTCCCGAGCATAGAATGTT
CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACCGAAGTTATAAAAGAACT
CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCACGTAAAT
AAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGTG
ATTTCCCAAGCATGGAATGTTTAGAAAATTGCTCAAAGGAATGGATCGTCTTGAATACTGTAAGG
AACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAAGAACCAAGAG
AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
Found at i:21069323 original size:214 final size:214
Alignment explanation
Indices: 21068347--21070305 Score: 2402
Period size: 213 Copynumber: 9.1 Consensus size: 214
21068337 TGCATCAACC
* * * *
21068347 AAACTTGTTTACAAAATGACAAA-TAATTTAGA-AAAATGATGTGATTTCCCGAGCATAGAATTT
1 AAACTTGTTTACAAAATGACAAACT-ATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* * * * **
21068410 TTAGAAAGTTGCTCGAAGGAATGTATTGTCTTGAATACTAAAAGGAACCGAAGTTATAAAAGAAC
65 TCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * *
21068475 TCATAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACATAAATA
130 TCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
*
21068540 AGTATTTAATTCAAAGACCA
195 AGTTTTTAATTCAAAGACCA
*
21068560 AAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
*
21068625 C-GAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTGTAAGGAACC-AAGTTATAAAAGAAC
66 CAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
21068688 TCGTAAAAGTTTGAAAAGTTCGAAAGTTCATCCAACAGCCAAGATAAACAATTCTCACGTAAATA
130 TCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
** *
21068753 AGTTTTTGTTTTAAAGACCA
195 AGTTTTTAATTCAAAGACCA
* * *
21068773 AAACTTGTTTACAAAATGAAAAACTATTTAGACTAAATGATGCGATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * *
21068838 CA-AAAATTGCTCAAAGGAATGGATTGTCTTAAATACCTTAAGGAACCGAAGTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * * *
21068902 CGTAAAAGTTTGAAAAGTTTGGAAGTTCGTCCAAGAAACAAGAGAGAGAAACAATTCTCACATAA
131 CGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG-AAC--CA-AGAGAAACAATTCTCACGTAA
* * *
21068967 ATAAGTTTTTAATTTAATGACCG
192 ATAAGTTTTTAATTCAAAGACCA
* * * * ** * *
21068990 AAACTAGTTTACAAAATGACAAACAATTTAGA-AAAATGATGTGATTTTTCAAGCATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * * *
21069054 TAGAAAGTTGCTCAAAGGAATGTATCGTCTTGAATACTGTAAGGAACCAAAGTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * * * * *
21069119 CATAAAAGTTTGACAAGTTCAGAAGTCCATCCAAGAGCCAAGAGAATCAATTCTCACGTAAATAA
131 CGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAA
*
21069184 GTTTTTTATTCAAAGACCA
196 GTTTTTAATTCAAAGACCA
* * * * *
21069203 AAACTTGTTTTCAAAATGACAAACTATTTAGACCAAATGCTGCTATTTCCCGAGAATAGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* *
21069268 CAGAAAATTGCTCGAAGGAATGGATCATCTTGAATACTTTAAGGAACCGAAGTTATGAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * *
21069333 CGTAAAAGTTTGACTAGTTCGAAAGTTCATCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAAT
* * *
21069398 AAGTTTTAAATTCAAAAAACA
194 AAGTTTTTAATTCAAAGACCA
* *
21069419 AAATCTT-TTTACAAAATGACAAACTATTTAGACAAAATGATAG-GATTTCCCGAACATGGAATG
1 AAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGAT-GCGATTTCCCGAGCATGGAATG
* * * * ** *
21069482 TTTAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTATGAAACTAAAATTATAAAAGAA
64 TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * *
21069547 CTCGTAAAAGTTTGAAAAGTTCGAAAGTTCGTCCAAGAACCAAAAGAGAAACAATTCACATGTAA
129 CTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACC--AAGAGAAACAATTCTCACGTAA
*
21069612 ATAAGTATTTAATTCAAAGACCA
192 ATAAGTTTTTAATTCAAAGACCA
* * * *
21069635 AAAGTTGTTTACAAAATGACAAACTATTTAAACCAAATGATACGATTTCTCGAGCATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21069700 CAGAAAATTGCTCAAAGGAATGGATCATCTTGAATACTGTAAGGAA-CTAAGTTGTAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * * * * *
21069764 CGTAAAAGTTTGAAAAGTTCGAAAGTTCGTCCAACAGCCAAGAAAAATAATTCTCACGTAAATAA
131 CGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAA
*
21069829 GTTTTTGTATT-AAAGTA-CA
196 GTTTTT-AATTCAAAG-ACCA
* * * * * *
21069848 AAA-TTGTATACAAAACGAAAAACTATTTAGACTAAATGATGTGATTTCCCGAGAATGGAATGTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* *
21069912 CA-AAAATTGCTCAAAGGAATGGATCGTCTTGAATACATTAAGGAACCGAAGTTATAAAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * * * *
21069976 CGTAAAAGTTTGAAAAGATT-GGAACTTCATCCAAGAACCAAGAGAAAAAATTCTCACGTATATA
131 CGTAAAAGTTTGACAAG-TTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATA
*
21070040 AGTTTTTAATTTAAAGACCA
195 AGTTTTTAATTCAAAGACCA
* * * * *** * *
21070060 AAACATGTTTACAAAATGACAATCAATTTAGA-AAAATGATGCGATTTTTTGAGCATAGAATTTT
1 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * * * *
21070124 CAGAAAGTTGCTCGAAGGAATGTATCGTCTAGAATACTGTAAGGAACCGAAGTTATACAAGAACT
66 CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* *
21070189 CGTAAAATTTTGACAAGTTCGGAAGTTCGT-CAAGAACCACGAGAGAAAAAATTCTCACGTAAAT
131 CGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCA--AGAGAAACAATTCTCACGTAAAT
* *
21070253 AAGTTCTTTTAATTCAAACACAA
194 AAG-T-TTTTAATTCAAAGACCA
* *
21070276 AAATTTGTTTACAAAATAACAAACTATTTA
1 AAACTTGTTTACAAAATGACAAACTATTTA
21070306 ATTCAAAGAC
Statistics
Matches: 1503, Mismatches: 212, Indels: 59
0.85 0.12 0.03
Matches are distributed among these distances:
211 44 0.03
212 216 0.14
213 433 0.29
214 215 0.14
215 55 0.04
216 383 0.25
217 157 0.10
ACGTcount: A:0.42, C:0.14, G:0.16, T:0.28
Consensus pattern (214 bp):
AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
CAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
CGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAA
GTTTTTAATTCAAAGACCA
Found at i:21079819 original size:214 final size:212
Alignment explanation
Indices: 21078583--21079820 Score: 1330
Period size: 214 Copynumber: 5.8 Consensus size: 212
21078573 GAATGTATCG
* * * * * * *
21078583 AAAGAGCTCGTAAAGTTTTACACGTTCGAAAATTCGTCCAATAACCAAGAGAGAAAAAATTCTCA
1 AAAGAACTCGTAAAGTTTAACAAGTTCGGAAGTTCGTCCAACAACC-A-AGAGAAACAATTCTCA
* * * * * *
21078648 CGTAAATAAATGTTAAATTCAAAGACCAAAAGTTTTTTTACATAATGACAAACTATTTAGACCAA
64 CGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACCAA
* * * * * *
21078713 TTGATGCGATTTCCCGAGCATGGAATGTTC-GAAAAATAGCTTGAAAGAGTGGA-CTGTCTTGAA
128 ATGATGCGATTTCCCGAGAATGGAATGTTCAG-AAAATTGCTCGAAAGAATGGATC-GTCTTAAA
*
21078776 TACTTTAAGGAACTGAAGTTGTA
191 TACTTTAAGGAAC-GAAGTTATA
* * * * * * *
21078799 AAAGAACTCGTACAAGTTTGACTAGTTTGGAAGTTCGTCAAAGAACCAAGGGAGAACAATCCTCA
1 AAAGAACTCGTA-AAGTTTAACAAGTTCGGAAGTTCGTCCAACAACCAAGAGA-AACAATTCTCA
* * * *
21078864 CGTAAACAGGTGTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAA
64 CGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAA
* *
21078929 TGATGCGATTTCTCGAGCATGGAATGTTC-GAAAAATTGCTCGAAAGAATGGATCGTCTTAAATA
129 TGATGCGATTTCCCGAGAATGGAATGTTCAG-AAAATTGCTCGAAAGAATGGATCGTCTTAAATA
* *
21078993 CTGTAAGGAACCAAGTTATA
193 CTTTAAGGAACGAAGTTATA
** *
21079013 AAAGAACTCGTAAAAGTTTGAA-AAGTTCAAAAGTTCGTCCAACAGCCAAGAGAAACAATTCTCA
1 AAAGAACTCGT-AAAGTTT-AACAAGTTCGGAAGTTCGTCCAACAACCAAGAGAAACAATTCTCA
*** * * * * * * *
21079077 CGTAAATAAGTTTTCGTTTTAAAGACAAAAACTTGTTTACGAAATGAAAAACTACTTAGTCTAAA
64 CGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAA
21079142 TGATGCGATTTCCCGAGAATGGAATGTTCA-AAAATTGCTC-AAAGGAATGGATCGTCTTAAATA
129 TGATGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAA-GAATGGATCGTCTTAAATA
* *
21079205 CCTTAAGGAACCGAAGTTACA
193 CTTTAAGGAA-CGAAGTTATA
* * *
21079226 AAAGAACTCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAATAACCAAGAGAGAGAAACAATTC
1 AAAGAACTCGT-AAAGTTTAACAAGTTCGGAAGTTCGTCCAACAACC---A-AGAGAAACAATTC
* *
21079291 TCACATAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACC
61 TCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACC
* * * *
21079356 AAATGATACGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAATGAATGGATCGTCTTAAA
126 AAATGATGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAAGAATGGATCGTCTTAAA
*
21079421 TACTTCAAGGAATCGAAGTTATA
191 TACTTTAAGGAA-CGAAGTTATA
* * * * *
21079444 AAAGAACTCAT-AA----AAGAAGTTCGGAAGTTCATCTAAGAACCAAGAGAAACAATTCTCACG
1 AAAGAACTCGTAAAGTTTAACAAGTTCGGAAGTTCGTCCAACAACCAAGAGAAACAATTCTCACG
* * * * * * * * * *
21079504 TAAATAAGTTTTTGATTTAACGACCAAACCTTGTTTACAAGATGGCAATCCATTTAGAGCAAATT
66 TAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATG
* * * * * * *
21079569 ATGCGATTTCCCGAGAATGTAATGCTT-AGGAAATTGCTCGAAGGAGTCGATCATCTTGAATACT
131 ATGCGATTTCCCGAGAATGGAATG-TTCAGAAAATTGCTCGAAAGAATGGATCGTCTTAAATACT
*
21079633 TTTAGGAATCGAAGTTATA
195 TTAAGGAA-CGAAGTTATA
* * *
21079652 AAAGAAGTCGTAATAGTTTAACAAGTTCAGAAGTTCGTCCAACAACCAAGAGAAGCAATTCTCAC
1 AAAGAACTCGTAA-AGTTTAACAAGTTCGGAAGTTCGTCCAACAACCAAGAGAAACAATTCTCAC
* * * * *
21079717 GTAAAAAAGTTTTTGATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAAT
65 GTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAAT
** * * *
21079782 GATAAGACTTCCCAATAATGGAATGTTCAGAAAATTGCT
130 GATGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCT
21079821 TTAAGGAATG
Statistics
Matches: 859, Mismatches: 140, Indels: 48
0.82 0.13 0.05
Matches are distributed among these distances:
208 150 0.17
209 4 0.00
210 1 0.00
211 3 0.00
212 60 0.07
213 137 0.16
214 169 0.20
215 103 0.12
216 52 0.06
217 122 0.14
218 56 0.07
219 2 0.00
ACGTcount: A:0.40, C:0.16, G:0.17, T:0.27
Consensus pattern (212 bp):
AAAGAACTCGTAAAGTTTAACAAGTTCGGAAGTTCGTCCAACAACCAAGAGAAACAATTCTCACG
TAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATG
ATGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAAGAATGGATCGTCTTAAATACTT
TAAGGAACGAAGTTATA
Found at i:21079996 original size:186 final size:184
Alignment explanation
Indices: 21079659--21080007 Score: 416
Period size: 186 Copynumber: 1.9 Consensus size: 184
21079649 ATAAAAGAAG
* **
21079659 TCGTAATAGTTTAACAAGTTCAGAAGTTCGTCCAACAACCAAGAGAAGCAATTCTCACGTAAAAA
1 TCGTAATAGTTTAACAAGTTCAGAAATTCGTCCAACAACCAAGAGAAAAAATTCTCACGTAAAAA
* **
21079724 AGTTTTTGATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGATAAGA
66 AGTGTTAAATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGATAAGA
* *
21079789 CTTCCCAATAATGGAATGTTCAGAAAATTGCTTTAAGGAATGTATCGAAAGAGC
131 CTTCCCAAGAATGGAATGTTCAGAAAATAGCTTTAAGGAATGTATCGAAAGAGC
* * *
21079843 TCGTAA-AGTTTTACACGTTC-GAAAATTCGTCCAATAACCAAGAGAGAAAAAATTCTCACGTAA
1 TCGTAATAGTTTAACAAGTTCAG-AAATTCGTCCAACAACC-A-AGAGAAAAAATTCTCACGTAA
* * ** * * *
21079906 ATAAA-TGTTAAATTCAAAGACCAAAAGTTTTTTTACATAATGACAAACTATTTAGACCAATTGA
63 A-AAAGTGTTAAATTAAAAGACCAAAA-CTTGATTACAAAATGACAAACTATTTAGACAAAATGA
** * * * *
21079970 TGCGATTTCTCGAGCATGGAATGTTCAGAAAATAGCTT
126 TAAGACTTCCCAAGAATGGAATGTTCAGAAAATAGCTT
21080008 GAAAGAGTGG
Statistics
Matches: 136, Mismatches: 24, Indels: 8
0.81 0.14 0.05
Matches are distributed among these distances:
182 1 0.01
183 27 0.20
184 7 0.05
185 37 0.27
186 64 0.47
ACGTcount: A:0.42, C:0.15, G:0.15, T:0.28
Consensus pattern (184 bp):
TCGTAATAGTTTAACAAGTTCAGAAATTCGTCCAACAACCAAGAGAAAAAATTCTCACGTAAAAA
AGTGTTAAATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGATAAGA
CTTCCCAAGAATGGAATGTTCAGAAAATAGCTTTAAGGAATGTATCGAAAGAGC
Found at i:21081249 original size:186 final size:184
Alignment explanation
Indices: 21080912--21081255 Score: 415
Period size: 186 Copynumber: 1.9 Consensus size: 184
21080902 ATAAAAGAAG
* **
21080912 TCGTAATAGTTTAACAAGTTCAGAAGTTCGTCCAACAACCAAGAGAAGCAATTCTCACGTAAAAA
1 TCGTAATAGTTTAACAAGTTCAGAAATTCGTCCAACAACCAAGAGAAAAAATTCTCACGTAAAAA
* **
21080977 AGTTTTTGATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGATAAGA
66 AGTGTTAAATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGATAAGA
*
21081042 CTTCCCAATAATGGAATGTTCAGAAAATTACTTTAAGGAATGTATCGAAAGAGC
131 CTTCCCAAGAATGGAATGTTCAGAAAATTACTTTAAGGAATGTATCGAAAGAGC
* * *
21081096 TCGTAA-AGTTTTACACGTTC-GAAAATTCGTCCAATAACCAAGAGAGAAAAAATTCTCACGTAA
1 TCGTAATAGTTTAACAAGTTCAG-AAATTCGTCCAACAACC-A-AGAGAAAAAATTCTCACGTAA
* * ** * * *
21081159 ATAAA-TGTTAAATTCAAAGACCAAAAGTTTTTTTACATAATGACAAACTATTTAGACCAATTGA
63 A-AAAGTGTTAAATTAAAAGACCAAAA-CTTGATTACAAAATGACAAACTATTTAGACAAAATGA
** * * * *
21081223 TGCGATTTCTCGAGCATGGAATGTTCAGAAAAT
126 TAAGACTTCCCAAGAATGGAATGTTCAGAAAAT
21081256 AGCTTGAAAG
Statistics
Matches: 132, Mismatches: 23, Indels: 8
0.81 0.14 0.05
Matches are distributed among these distances:
182 1 0.01
183 27 0.20
184 7 0.05
185 37 0.28
186 60 0.45
ACGTcount: A:0.42, C:0.15, G:0.15, T:0.28
Consensus pattern (184 bp):
TCGTAATAGTTTAACAAGTTCAGAAATTCGTCCAACAACCAAGAGAAAAAATTCTCACGTAAAAA
AGTGTTAAATTAAAAGACCAAAACTTGATTACAAAATGACAAACTATTTAGACAAAATGATAAGA
CTTCCCAAGAATGGAATGTTCAGAAAATTACTTTAAGGAATGTATCGAAAGAGC
Found at i:21082325 original size:214 final size:211
Alignment explanation
Indices: 21081089--21082341 Score: 1275
Period size: 214 Copynumber: 5.9 Consensus size: 211
21081079 GAATGTATCG
* * * * * * *
21081089 AAAGAGCTCGTAAAGTTTTACACGTTCGAAAATTCGTCCAATAACCAAGAGAGAAAAAATTCTCA
1 AAAGAACTCGTAAAGTTTAACAAGTTCGGAAGTTCGTCCAACAACC-A-AGAGAAACAATTCTCA
* * * * *
21081154 CGTAAATAAATGTTAAATTCAAAGACCAAAAGTTTTTTTACATAATGACAAACTATTTAGACCAA
64 CGTAAAAAAAT-TTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACCAA
* * * * * * *
21081219 TTGATGCGATTTCTCGAGCATGGAATGTTCAGAAAATAGCTTGAAAGAGTGGA-CTGTCTTGAAT
127 ATGATGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATC-GTCTTGAAT
*
21081283 ACTTTAAGGAACTGAAGTTGTA
191 ACTTTAAGGAAC-GAAGTTATA
* * * * * * *
21081305 AAAGAACTCGTACAAGTTTGACTAGTTTGGAAGTTCGTCAAAGAACCAAGGGAGAACAATCCTCA
1 AAAGAACTCGTA-AAGTTTAACAAGTTCGGAAGTTCGTCCAACAACCAAGAGA-AACAATTCTCA
* ** *
21081370 CGTAAACAGGTGTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAA
64 CGTAAAAAAAT-TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAA
* * * * * *
21081435 TAATGCGATTTCTCGAGCATTGAATGTTC-GAAAAATTGCTCGAAAGAATGGATCGTCTTAAATA
128 TGATGCGATTTCCCGAGAATGGAATGTTCAG-AAAATTGCTCGAAGGAATGGATCGTCTTGAATA
* *
21081499 CTGTAAGGAACCAAGTTATA
192 CTTTAAGGAACGAAGTTATA
** *
21081519 AAAGAACTCGTAAAAGTTTGAA-AAGTTCAAAAGTTCGTCCAACAGCCAAGAGAAACAATTCTCA
1 AAAGAACTCGT-AAAGTTT-AACAAGTTCGGAAGTTCGTCCAACAACCAAGAGAAACAATTCTCA
* * ** * * * * * *
21081583 CGTAAATAAGTTTTCGTTTTAAAGACAAAAACTTGTTTACGAAATGAAAAACTATTTAGTCTAAA
64 CGTAAAAAAATTTT-AATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAA
* * *
21081648 TGATGCCATTTCCCGAGAATGGAATGTTCA-AAAATTGCTCAAAGGAATGGATCGTCTTAAATAC
128 TGATGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATAC
*
21081712 CTTAAGGAACCGAAGTTATA
193 TTTAAGGAA-CGAAGTTATA
* * *
21081732 AAAGAACTCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCAATAACCAAGAGAGAGAAACAATTC
1 AAAGAACTCGT-AAAGTTTAACAAGTTCGGAAGTTCGTCCAACAACC---A-AGAGAAACAATTC
* ** *
21081797 TCACATAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACC
61 TCACGTAAA-AAAATTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACC
* * * * *
21081862 AAATGATACGATTTCCCGAGCATGGAATGTTTAGAAAATTGTTCGAATGAATGGATCGTCTTGAA
125 AAATGATGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAA
*
21081927 TACTTCAAGGAATCGAAGTTATA
190 TACTTTAAGGAA-CGAAGTTATA
* * * * *
21081950 AAAGAACTCAT-AA----AAGAAGTTCGGAAGTTCATCTAAGAACCAAGAGAAACAATTCTCACG
1 AAAGAACTCGTAAAGTTTAACAAGTTCGGAAGTTCGTCCAACAACCAAGAGAAACAATTCTCACG
** * * * * * * * * * *
21082010 TAAATAAGTTTTTGATTTAACGACCAAACCTTGTTTACAAGATGGCAATCCATTTAGAGCAAATT
66 TAAA-AAAATTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATG
* * * * *
21082075 ATGCGATTTCCCGAGAATGTAATGCTT-AGGAAATTGCTCGAAGGAGTCGATCATCTTGAATACT
130 ATGCGATTTCCCGAGAATGGAATG-TTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACT
*
21082139 TTTAGGAATCGAAGTTATA
194 TTAAGGAA-CGAAGTTATA
* * *
21082158 AAAGAAGTCGTAATAGTTTAACAAGTTCAGAAGTTCGTCCAACAACCAAGAGAAGCAATTCTCAC
1 AAAGAACTCGTAA-AGTTTAACAAGTTCGGAAGTTCGTCCAACAACCAAGAGAAACAATTCTCAC
* **
21082223 GTAAAAAAAATTTTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGAAAAAAT
65 GT-AAAAAAATTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAAT
* * * * *
21082288 GATGAGACTTCCCAATAATGGAATGTTCAGAAAATTGCTCAAAGGAATGGATCG
129 GATGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCG
21082342 AAAGAGCTAG
Statistics
Matches: 863, Mismatches: 149, Indels: 52
0.81 0.14 0.05
Matches are distributed among these distances:
208 150 0.17
209 4 0.00
210 1 0.00
212 65 0.08
213 134 0.16
214 178 0.21
215 103 0.12
216 52 0.06
217 114 0.13
218 62 0.07
ACGTcount: A:0.40, C:0.15, G:0.17, T:0.27
Consensus pattern (211 bp):
AAAGAACTCGTAAAGTTTAACAAGTTCGGAAGTTCGTCCAACAACCAAGAGAAACAATTCTCACG
TAAAAAAATTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGA
TGCGATTTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTT
AAGGAACGAAGTTATA
Found at i:21083328 original size:214 final size:212
Alignment explanation
Indices: 21082353--21083554 Score: 1391
Period size: 214 Copynumber: 5.6 Consensus size: 212
21082343 AAGAGCTAGT
* * * * * * *
21082353 AAAGTTTTACAAGTTCGAAAATTCGTCCAATAACCAAGAGAGAAAAAATTCTCATGTAAATAAAT
1 AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAGT
* * * * * * * *
21082418 GTTTAATTCAAAGATCAAAACTTTTTTTTACATAATCACAAACTATTTAGACTAATTGATGCGAT
64 TTTTGATTCAAAGACCAAAAC--TTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGAT
* ** *
21082483 TTCCCGAGCATGGAATGTTCGGAAAACAGCTTGAAGGAGTGGA-CTGTCTTGAATACTTTAAGGA
127 TTCCCGAGCATGGAATGTTCAGAAAATTGCTTGAAGGAATGGATC-GTCTTGAATAC-TTAAGGA
*
21082547 ACTGAAGTTGTAAAAGAACTCGTA
190 AC-GAAGTTATAAAAGAACTCGTA
* ** * * * * * *
21082571 AAAGTTTGACTAGTTCGGAAGTTCGTTAAAGAACCAAGGGAGAACAATCCTTAGGTAAATAGGTG
1 AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGA-AACAATTCTCACGTAAATAAGTT
* *
21082636 TTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTC
65 TTTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTC
* * * * *
21082701 CCGAGCATGGAAAGTTCAGAAAATAGCTCGAAGGAATGGATCATCTTGAATACTGTAAGGAACCA
130 CCGAGCATGGAATGTTCAGAAAATTGCTTGAAGGAATGGATCGTCTTGAATACT-TAAGGAACGA
21082766 AGTTATAAAAGAACTCGTA
194 AGTTATAAAAGAACTCGTA
* * * * *
21082785 AAAGTTTAAAAAGTTCGAAAGTTCGTCCAACAGCCAAGAGAAACAATTCTCACGTAAATAAGTTT
1 AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAGTTT
* * * * * * *
21082850 TTGTTTTAAAGATCAAAACTTGTTTTCAAAATGAAAAACTATTTAGACTAAATGATGCGATTTCT
66 TTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCC
* ** *
21082915 CGAGAATGGAATGTTCA-AAAATTGCTCAAAGGAATGGATCGTCTTAAATACCTTAAGGAACCGA
131 CGAGCATGGAATGTTCAGAAAATTGCTTGAAGGAATGGATCGTCTTGAATA-CTTAAGGAA-CGA
21082979 AGTTATAAAAGAACTCGTA
194 AGTTATAAAAGAACTCGTA
* * * *
21082998 AAAATTTGAAAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGAGAAACAATTCTCACATAAATAA
1 AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACC---A-AGAGAAACAATTCTCACGTAAATAA
* * **
21083063 GTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGATATGAT
62 GTTTTTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGAT
* * *
21083128 TTCCCGAGCATGGACTGTTTAGAAAATTGCTTGAATGAATGGATCGTCTTGAATACTTCAAGGAA
127 TTCCCGAGCATGGAATGTTCAGAAAATTGCTTGAAGGAATGGATCGTCTTGAATACTT-AAGGAA
* *
21083193 TCGAAGTTATAAAAGAATTCATA
191 -CGAAGTTATAAAAGAACTCGTA
* * *
21083216 AAAGTTGGACAAGTTCGGAAGTTCATCAAAGAACCAAGAGAAACAATTCTCACGTAAATAAGTTT
1 AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAGTTT
* * ** * * *
21083281 TTGATTTAAAGACCAAAACTTGTTTACAAGATGGGAATCCATTTAGACCAAATTATGCGATTTCC
66 TTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCC
* * * * * * *
21083346 CGAGAATGTAATGTTTAGAAAATTGCTTGAAGGAGTCGATCATCTTGAATACTTTTAGGAATCGA
131 CGAGCATGGAATGTTCAGAAAATTGCTTGAAGGAATGGATCGTCTTGAATAC-TTAAGGAA-CGA
21083411 AGTTATAAAAGAACTCGTA
194 AGTTATAAAAGAACTCGTA
* * * * * * * **
21083430 ATAGTTTAACAAGTTCAGAAGTTCATCCAACAACCAAGAGAAGCAATTCTCACGTAAAAAAAATT
1 AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAGTTT
*
21083495 TTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACAAAATGATGCGA
66 TTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGA
21083555 CATCTGGATA
Statistics
Matches: 840, Mismatches: 132, Indels: 28
0.84 0.13 0.03
Matches are distributed among these distances:
212 36 0.04
213 142 0.17
214 313 0.37
215 96 0.11
216 6 0.01
217 135 0.16
218 112 0.13
ACGTcount: A:0.41, C:0.14, G:0.17, T:0.28
Consensus pattern (212 bp):
AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAAACAATTCTCACGTAAATAAGTTT
TTGATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCC
CGAGCATGGAATGTTCAGAAAATTGCTTGAAGGAATGGATCGTCTTGAATACTTAAGGAACGAAG
TTATAAAAGAACTCGTA
Found at i:21086912 original size:187 final size:185
Alignment explanation
Indices: 21086604--21086941 Score: 478
Period size: 187 Copynumber: 1.8 Consensus size: 185
21086594 AGTTCAGAAG
* * * *
21086604 TTCGTCCAATAACCACGAGAAGCAATTCTCACGTAAAAAAGTTTTTGACTCAAAGACCAAAACTT
1 TTCGTCCAATAACCAAGAGAAACAATTCTCACGTAAAAAAGTGTTTAACTCAAAGACCAAAACTT
21086669 GTTTACAAAATGACAAACTATTTAGACAAAATGAAGCGACTTCCCGACAATGGAATGTTCAAAAA
66 GTTTACAAAATGACAAACTATTTAGACAAAATGAAGCGACTTCCCGACAATGGAATGTTCAAAAA
21086734 ATTGCTCAAAGGAATGGATCGAAAGAGCTTTTGTAAAGTTTTACAAGTTTGAAAA
131 ATTGCTCAAAGGAATGGATCGAAAGAGCTTTTGTAAAGTTTTACAAGTTTGAAAA
* * * * *
21086789 TTCGTCCAATAACCAAGAGAGAAACAATTTTCACGTAAATAAGTGTTTAATTCAAAGGCCAAAAG
1 TTCGTCCAATAACC-A-AGAGAAACAATTCTCACGTAAAAAAGTGTTTAACTCAAAGACCAAAAC
* * * * * * *** *
21086854 TTTTTTACAAAATGGCAAACTATTTAGACCAATTGATGCGATTTCCCGAGTGTGGAATGTTCAGA
64 TTGTTTACAAAATGACAAACTATTTAGACAAAATGAAGCGACTTCCCGACAATGGAATGTTCAAA
*
21086919 AAATTGCTCGAAGGAATGGATCG
129 AAATTGCTCAAAGGAATGGATCG
21086942 CCTTGAATAC
Statistics
Matches: 131, Mismatches: 20, Indels: 2
0.86 0.13 0.01
Matches are distributed among these distances:
185 14 0.11
186 1 0.01
187 116 0.89
ACGTcount: A:0.39, C:0.16, G:0.18, T:0.27
Consensus pattern (185 bp):
TTCGTCCAATAACCAAGAGAAACAATTCTCACGTAAAAAAGTGTTTAACTCAAAGACCAAAACTT
GTTTACAAAATGACAAACTATTTAGACAAAATGAAGCGACTTCCCGACAATGGAATGTTCAAAAA
ATTGCTCAAAGGAATGGATCGAAAGAGCTTTTGTAAAGTTTTACAAGTTTGAAAA
Found at i:21087510 original size:216 final size:215
Alignment explanation
Indices: 21086768--21089058 Score: 2372
Period size: 214 Copynumber: 10.8 Consensus size: 215
21086758 GAGCTTTTGT
* * * * *
21086768 AAAGTTTTACAAGTTTGAAAATTCGTCCAATAACCAAGAGAGAAACAATTTTCACGTAAATAAGT
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * * * *
21086833 GTTTAATTCAAAGGCCAAAAGTTTTTTACAAAATGGCAAACTATTTAGACCAATTGATGCGATTT
66 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGAGATTT
** * *
21086898 CCCGAGTGTGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTGTAAGGAACC
131 CCCGAGAATGGAATGTTCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
* *
21086963 GATGTTATAAATGAACTCGTA
195 GAAGTTATAAAAGAACTCGTA
* *
21086984 AAAGTTTGACAAGTTTC-AAAGTTTGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAAAAG
1 AAAGTTTGACAAG-TTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG
* * * * *
21087048 TTTTTAATTTAAAGGCAAAAACTTGTTTACAAAATGACAAACAATTTAGA-AAAATGATGCA-AT
65 TTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATG-AGAT
* * * * * * * * *
21087111 TTTCCGAGCATAGAATGTTTAGTAAGTTGCTCGAAGGAATGTATCGTCTTGAA-ACTATAGGGAA
129 TTCCCGAGAATGGAATGTTCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA
* *
21087175 CCGGAGTTATAAAAGAACTCATA
193 CCGAAGTTATAAAAGAACTCGTA
* * * *
21087198 AAAGTTTGAAAAGTTCGGAAGTTTGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAGA
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * *
21087261 TTTTGATTCAAAGACCAAAAGTTGTTTCCAAAATGACAAACTATTTAGACCAAATGCTGATATTT
66 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGAGATTT
* * *
21087326 CCCGAGAATGGAATGTTCGAAAAATTGCCCGAAGGAATGGATCATCTTGAATACTTTAAGAAACC
131 CCCGAGAATGGAATGTTC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
* *
21087391 GAAGTTATGAAAGAACTGGTA
195 GAAGTTATAAAAGAACTCGTA
* *
21087412 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGACCCAAGAGAGAAATAATTCTCACGTAAATAAGT
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * * *
21087477 TTTTAATTCAAACAACAAAACCTT-TTTCCAAAATGACAACCTATTTAAACCAAGTGAT-ACGAT
66 TTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGA-GAT
* * * * * * *
21087540 TTCCCTAGCATGAAATGTACTGAAAATTGCTCGAAAGAATGGATCGTCTTGAATACTTTACGGAA
129 TTCCCGAGAATGGAATGTTC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA
* *
21087605 CTGAAATTATAAAAGAACTCGTA
193 CCGAAGTTATAAAAGAACTCGTA
* * ** * * *
21087628 AAAGTTTG--AA-----AAA-TT-AT--AA-AA-GAACTGA-TAATAATTGTCACGTAAATAAGT
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-
* * * *
21087679 TCTTTTAATTCAAACACAAAAATTTGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCA-A
65 T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATG-AGA
* * * * *
21087742 TTTCCCAAGCATGGAATGTTCGAAAAATTG-TCGAAGGAGTGGATCGTCTTGAATTCATTAAGGA
128 TTTCCCGAGAATGGAATGTTC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGA
* * *
21087806 ACCAAAGTTATAAAATAACCCGTA
192 ACCGAAGTTATAAAAGAACTCGTA
* * *
21087830 AAAG-TT--C-----CG-AAGTTCTTCCAAGAACCAAGAGAGAAACAATTCTCATGTAAAAAAGT
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-
* * * * * * *
21087886 TCTTTTAATTCAAACACAAAAACTTGTCTACAAAATTAGAAACTATTTATACCAAATGATGCGAT
65 T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGAGAT
* * * * * *
21087951 ATCCCGA-ATGTGGAAAGTTCAAAAAATTGCTCGGAGGAGTGGATTGTCTTGAATACTTTAAGGA
129 TTCCCGAGA-ATGGAATGTTC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGA
*
21088015 ACCGAAGTTGTAAAAGAACTCGTA
192 ACCGAAGTTATAAAAGAACTCGTA
* * * * * *
21088039 AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGGGAG-AATAATCCTCAGGTAAATAAGG
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * *
21088103 GTTTAATTGAAAGACCAAAAGTTGTTTACAAAATGACACACTATTTATACCAAATGAT-ATGATT
66 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGA-GATT
* *
21088167 TCCC-------GAATGTTCGAAAAATTGCTCGAAGGAATGGATCGCCTTGAATACTGTAAGGAAC
130 TCCCGAGAATGGAATGTTC-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
*
21088225 C-AAGCTATAAAAGAACTCGTA
194 CGAAGTTATAAAAGAACTCGTA
** * * * * *
21088246 AATTTTTGAAAAGTTTGGAAGTTCGTCCAACAGCC-A-AGAGAAAC-ATTCTCACGTAAATAAGT
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
*** * * * * *
21088308 TTTCGTTTTAAAGACCAAAACTTGTTTAAAAAATGA-AAACTATTTAAACTAAATGATGTGATTT
66 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGAGATTT
* *
21088372 CTCGAGAATGGAATATTCAAAAATTGCTC-ATAGGAATGGATCGTCTTGAATACTTTAAGGAACC
131 CCCGAGAATGGAATGTTCAAAAATTGCTCGA-AGGAATGGATCGTCTTGAATACTTTAAGGAACC
* *
21088436 GAAATTATAAAACAACTCGTA
195 GAAGTTATAAAAGAACTCGTA
* * * *
21088457 AAAGTTTGACAAGTTTGGAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCATGTAAATAAGT
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* *
21088522 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACAATTTAGACCAAATGAT-ACGAGT
66 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGA-GATT
* * * * *
21088586 TCCCGAGCATGGAATGTTTAGAAAATTGCTCGAATGAAAGGATCGTCTTGAATACTTTAAGGAAT
130 TCCCGAGAATGGAATGTTCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
* *
21088651 CGAAGTTGTAAACGAACTCGTA
194 CGAAGTTATAAAAGAACTCGTA
* * **
21088673 AAAGTTGGACAAGTTCAAAAGTTCGTCCAAGAATTAAG-G-GAAACAATTCTCACGTAAATAAGT
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * * *
21088736 TTTTGATTTAAAGACCAAAACTTGTTTACAAAATGGCAATCTATTTAGACCAAATTATGCGATTT
66 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGAGATTT
* * * * *
21088801 CCCGAGAATGTAATGTTCAGAAAATTGCTCGAAGGAGTCGATCATCTTGAATACTTTAAGGAATC
131 CCCGAGAATGGAATGTTCA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
* * *
21088866 GATGTTATAAAAGAATTCTTA
195 GAAGTTATAAAAGAACTCGTA
* *
21088887 AAAGTTTGACAAGTTC-AGAAGTTCGTCCAAGAACC-A-AGAGAAGCAATTCTCACGTAAAAAAG
1 AAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG
* * ** * *
21088949 TTTTTGATTCAAAGACCAAAACTAGTTTACAAAATGACAAACTAAATAGACAAAATGATGAGACT
65 TTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGAGATT
* * *
21089014 TCCCAATAATGGAATGTTCAGAAAATTGCTCAAAGGAATGGATCG
130 TCCCGAGAATGGAATGTTCA-AAAATTGCTCGAAGGAATGGATCG
21089059 AAAGAGCTCG
Statistics
Matches: 1731, Mismatches: 282, Indels: 126
0.81 0.13 0.06
Matches are distributed among these distances:
200 2 0.00
201 4 0.00
202 73 0.04
203 42 0.02
204 66 0.04
205 52 0.03
206 7 0.00
207 111 0.06
208 85 0.05
209 58 0.03
210 44 0.03
211 53 0.03
212 70 0.04
213 66 0.04
214 462 0.27
215 149 0.09
216 341 0.20
217 24 0.01
218 22 0.01
ACGTcount: A:0.40, C:0.15, G:0.17, T:0.27
Consensus pattern (215 bp):
AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGAGATTT
CCCGAGAATGGAATGTTCAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
AAGTTATAAAAGAACTCGTA
Found at i:21087819 original size:202 final size:207
Alignment explanation
Indices: 21087225--21104915 Score: 2923
Period size: 214 Copynumber: 83.0 Consensus size: 207
21087215 GAAGTTTGTC
* * * * * *
21087225 CAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAG--ATTTTGATTCAAAGACCAAAAGTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * ** * *
21087286 TTCCAAAATGACAAACTATTTAGACCAAATGCTGATATTTCCCGAGAATGGAATGTTCGAAAAAT
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAAT
* * * * * * *
21087351 TGCCCGAAGGAATGGATCATCTTGAATACTTTAAGAAACCGAAGTTATGAAAGAACTGGTAAAAG
130 TGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAG
*
21087416 TTTGACAAGTTCGAAAGTTCGTC
195 TTTG--AA----GAAA--T--TA
* * *
21087439 CAAGACCCAAGAGAGAAATAATTCTCACGTAAATAAG-T-TTTTAATTCAAACAACAAAACCTT-
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAAC-ACAAAAACTTG
* * * * * * * *
21087501 TTTCCAAAATGACAACCTATTTAAACCAAGTGATACGATTTCCCTAGCATGAAATGTACTG-AAA
65 TTTACAAAATAACAAACTATTT-AACCAAATGATGCGATTTCCCAAGCATGGAATGTTC-GAAAA
* * * *
21087565 ATTGCTCGAAAGAATGGATCGTCTTGAATACTTTACGGAACTGAAA-TTATAAAAGAACTCGTAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAAC-CAAAGTTATAAAAGAACTCGTAA
21087629 AAGTTTGAA-AAATTA
192 AAGTTTGAAGAAATTA
* * * * * *
21087644 TAA-AA-GAACTGA-TAATAATTGTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAATTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
*
21087706 TTACAAAATAACAAACTATTTAACCAAATGATGCAATTTCCCAAGCATGGAATGTTCGAAAAATT
66 TTACAAAATAACAAACTATTTAACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATT
* * * *
21087771 G-TCGAAGGAGTGGATCGTCTTGAATTCATTAAGGAACCAAAGTTATAAAATAACCCGTAAAAGT
131 GCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGT
* *** *
21087835 TCCGAAGTTCTTC
196 T-TGAAGAAATTA
* * * *
21087848 CAAGAACCAAGAGAGAAACAATTCTCATGTAAAAAAGTTCTTTTAATTCAAACACAAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * *
21087913 CTACAAAATTAGAAACTATTTATACCAAATGATGCGATATCCCGAATG--TGGAAAGTTCAAAAA
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCC-AA-GCATGGAATGTTCGAAAA
* * * *
21087976 ATTGCTCGGAGGAGTGGATTGTCTTGAATACTTTAAGGAACCGAAGTTGTAAAAGAACTCGTAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
* *
21088041 AGTTTGACAAGTTCGGAAGTTCGTC
193 AGTTTG--AA-----GAA-AT--TA
** * * ** * * * *
21088066 CAAGAACCAAGGGAG-AATAATCCTCAGGTAAATAAG--GGTTTAATTGAAAGACCAAAAGTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * **
21088128 TTACAAAATGACACACTATTTATACCAAATGATATGATTT-CC---C---GAATGTTCGAAAAAT
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAAT
* * * * **
21088186 TGCTCGAAGGAATGGATCGCCTTGAATACTGTAAGGAACC-AAGCTATAAAAGAACTCGTAAATT
130 TGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAG
* *
21088250 TTTGAA-AAGTTTG
195 TTTGAAGAA-ATTA
* ** *
21088263 GAAGTTCGTCCAACAGCCAAGAGAA-ACATTCTCACGTAAATAAGTT-TTCGTT--TT-AAAGAC
1 CAAG---AACCAACAG---AGA-AATA-ATTCTCACGTAAATAAGTTCTT--TTAATTCAAACAC
* * * * * * * * *
21088323 CAAAACTTGTTTAAAAAATGA-AAACTATTTAAACTAAATGATGTGATTTCTCGAGAATGGAATA
56 AAAAACTTGTTTACAAAATAACAAACTATTT-AACCAAATGATGCGATTTCCCAAGCATGGAATG
* *
21088387 TTC-AAAAATTGCTC-ATAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAA-TTATAAAAC
120 TTCGAAAAATTGCTCGA-AGGAGTGGATCGTCTTGAATACTTTAAGGAACC-AAAGTTATAAAAG
* *
21088449 AACTCGTAAAAGTTTGACAAGTTTGGAAGTTCGTC
183 AACTCGTAAAAGTTTG--AA-----GAA-AT--TA
* * * * * *
21088484 CAAGAACAAAGAGAGAAACAATTCTCATGTAAATAAG-T-TTTTAATTCAAAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * *
21088547 TTACAAAATGACAAACAATTTAGACCAAATGATACGAGTTCCCGAGCATGGAATGTT-TAGAAAA
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AAAA
* ** * * * *
21088611 TTGCTCGAATGAAAGGATCGTCTTGAATACTTTAAGGAATCGAAGTTGTAAACGAACTCGTAAAA
129 TTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAA
* *
21088676 GTTGGACAAGTTCAAAAGTTCGTC
194 GTTTG--AAG----AAA--T--TA
** * * * * * *
21088700 CAAGAA-TTA-AGGGAAACAATTCTCACGTAAATAAG-T-TTTTGATTTAAAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
** * * * * *
21088761 TTACAAAATGGCAATCTATTTAGACCAAATTATGCGATTTCCCGAGAATGTAATGTTC-AGAAAA
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AAAA
* * * * * * *
21088825 TTGCTCGAAGGAGTCGATCATCTTGAATACTTTAAGGAATCGATGTTATAAAAGAATTCTTAAAA
129 TTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAA
*
21088890 GTTTGACAAGTTCAGAAGTTCGTC
194 GTTTG--AAG---A-AA--T--TA
** * * * * *
21088914 CAAGAACC-A-AGAGAAGCAATTCTCACGTAAAAAAG-T-TTTTGATTCAAAGACCAAAACTAGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* ** * * * **
21088975 TTACAAAATGACAAACTAAATAGACAAAATGATGAGACTTCCCAATAATGGAATGTTC-AGAAAA
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AAAA
* * * * * * ** * * ** *
21089039 TTGCTCAAAGGAATGGATCGAAAGAGCTCGTAA-AGTTTTACAAGTTCGGAAA-TTCGTCCAATA
129 TTGCTCGAAGGAGTGGATC----G-TCTTG-AATA-CTTTA-AGGAAC-CAAAGTT-ATAAAAGA
* * * *
21089102 AC-C--AAGAG--AGAAAAAATTCT
184 ACTCGTAAAAGTTTGAAGAAATT-A
* ** * ** * * * *
21089122 CACGTAAAGAA-A-TG-TTTAATTC-AAAG-ACCAA-AAGTT-TTTT-A--CAAA-AGGACAAAC
1 CAAG-AACCAACAGAGAAATAATTCTCACGTA--AATAAGTTCTTTTAATTCAAACA-CAAAAAC
* * * ** ** * * ** * *
21089176 -TATTTAGACCAAT-TGATGCGATTT-CCCGAGCGTGGAATGTTCAGAAAATTGCTCCAAGGAAT
62 TTGTTTACA-AAATAACAAACTATTTAACC-A-AAT-G-ATG--C-G---ATTTC-CCAA-GCAT
* * * *** * * * **
21089238 GG-ATCGTCTTG-AATACTG-T--AAGGAACCGA-AGT-TAT-AA-A--TGAA-CACATAAAAGT
114 GGAAT-GT-TCGAAAAATTGCTCGAAGGAGTGGATCGTCT-TGAATACTTTAAGGA-ACCAAAGT
* * ** * ***
21089291 T-TGACAAG---T-TTGGAAGTTTATCCAAGAACCAA
175 TAT-AAAAGAACTCGTAAAAG-TT-T-GAAGAAATTA
* * ** * * * ** * *** * *
21089323 GAGAGAAACAATTCTCACGTAAAAAAGTTTTTAATTTAAAGGCAAAAACTTTT--TACAAA-ATG
1 CA-AGAACCAA--CAGA-G-AAATAA--TTCTCACGTAAA--TAAGTTCTTTTAATTCAAACA-C
* ** * ** * *
21089385 ACAAAC-AATTT-----A-GA-AAA--A--T-----AAT---GCGATTTTTCGAGCATAGAATGT
56 AAAAACTTGTTTACAAAATAACAAACTATTTAACCAAATGATGCGATTTCCCAAGCATGGAATG-
* * * * * * ** * * **
21089430 TTAG-AAAGTTGCTCGAAGGAATGTATCATCTTGAA-GCTGCAGGGAATCGGAGTTATAAAAGAA
120 TTCGAAAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAA
* * *
21089493 CTCATAAAAGTTTGAAAAGTTCGGAAGTTTGTC
185 CTCGTAAAAGTTTG--AA-----GAA--AT-TA
* * * *
21089526 CAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAG-T-TTTTGATTCAAATACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * * * *
21089587 TTCCAAAATGACAAACTATTTAGACCAAATGCTGCTATTTCCCGAGAATGAAATGTTCAAAAAAT
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAAT
* * * * * * *
21089652 TGCTCAAAGGAATGGATCATCTTGAATACTTTAAGAAACCGAAGTTATGAAAGAACTGGTAAAAG
130 TGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAG
*
21089717 TTTGACAAGTTCGAAAGTTCGTC
195 TTTG--AA----GAAA--T--TA
* *
21089740 CAAGAACCAAGAGAGAAATAATTCTCACGTAAATAAG-T-TTTTAATTCAAACAACAAAACCTT-
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAAC-ACAAAAACTTG
* * *
21089802 TTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCTCGAGCATGGAA--TTCGAAAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAA
* * * * * *
21089865 TAGCTCGAAGGAATGGATTGACTTGAATACTTTATGGAACCGAAA-TTATAAAAGAACTTGTAAA
129 TTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACC-AAAGTTATAAAAGAACTCGTAAA
21089929 AGTTTGAGAAGATCGAAAGTTCA
193 AGTTT--G-A-A--GAAA-TT-A
* * * * * * *
21089952 TCCAAGAACTAAAAGAGAAACAATTCTCACGTAAATAAG-T-GTTTAATTCAAAGACCAAAAGTT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* *
21090015 GTGTACAAAATAACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * *
21090080 ATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGAAACCAAAGTTATAAAAGAACTCATAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
*
21090145 AGTTTGAAAAGTTCAATAGTTCGT
193 AGTTTG--AAG---AA-A-TT--A
* * * *
21090169 CAAAGAACCAAGAGAGAAACAATTCTCACGT-AATAAG-T-TTTTAATCCAAAGACCAAAAGTTT
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACA-CAAAA----
** * * * ** *
21090231 TTTTTTTTACAAAATGACACACTATTTATACCAAATGATGTC-ATTTCCTGAGCATGTAATGTT-
60 ACTTGTTTACAAAATAACAAACTATTTA-ACCAAATGATG-CGATTTCCCAAGCATGGAATGTTC
* * * * * *
21090294 TAGAAAATTGCTCGAAGGAATGGATTGTCTTGAATAATGTAAGGAACCAAAGTTATAAAAGAAAT
123 GA-AAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACT
* * *
21090359 CGGAAAAGTTT-AACAAGTT-
187 CGTAAAAGTTTGAAGAAATTA
* * * * * * **
21090378 CGGAAGTTCGTCCAAGCACCAAGAGAAACAATTCTCATGTAAATAA-AT-TTTTGATTCAAAGGG
1 C--AA----G---AACCAAC-AGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAA-CA
* * * * * * *
21090441 C-AAAACTTGTTTCCAAAATGAA-GAACTATTTAGACCAAATGCTGCTATCTCCCGAGAATGGAA
55 CAAAAACTTGTTTACAAAAT-AACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAA
* * *
21090504 TGTTC-AGAAAATTGCTCGAAGGCA-TGGATCATCTTGAATGCTTTAAGGAACCGAAGTTATAAA
118 TGTTCGA-AAAATTGCTCGAAGG-AGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAA
* *
21090567 AGAACTTGTAAAAGTTTGACAAGTTCGAAAGTTCTTC
181 AGAACTCGTAAAAGTTTG--AA----GAAA----TTA
* * * * *
21090604 CAAGAACCAAGAGAGAAACAATTCTTACGTAAATAAG-T-TTTTAATTCCCAAGAGAGAAACAA-
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATT--CAA-ACACAAA-AAC
* * * * * * ** * ** ** * **
21090666 TT-CTTAC---GTAACTAAGTTTTTAATTCAATCAACAAGACTTTTTTACAA-AATAACAAACTA
62 TTGTTTACAAAATAACAAACTATTTAA-CCAA--ATGATG-CGATTTCCCAAGCAT--GGAA-T-
* * * * * * * * ** ** *
21090726 TTTAGACCAAATGATGCGATTTCCG-AGCA-TGGAAT-GT-TTTAAAAATTGATCGAAGGAATG-
119 GTTCGA-AAAAT--TGC----T-CGAAGGAGTGG-ATCGTCTTGAATACTTTAAGGAACCAAAGT
* * * * *
21090786 GAT---CG-TCTTG-AATACA-TTATGGAACTGAATTATA
175 TATAAAAGAACTCGTAA-A-AGTT-T-GAA--GAAAT-TA
* * * * * ****** *
21090820 AAAGAACTCGTAAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG-AACCA-AAATAGAAACAACT
1 CAAGAAC-C---AACAG--AGA-AA--T---AA-TTC-T-CACGTAA--ATAAGTTCTTTTAATT
** ** * * * * * **
21090883 CTCACGTAAATAAGTATGTAATT-C-GAAGACCAAAACTTTTTTACAAAATGACAAACAATTTAG
49 CAAACACAAA-AACT-TGT--TTACAAAATAAC-AAAC-TATTT----AA-CC---A-AA--T-G
* * * * * * * * *
21090946 AAAAATGATACGATTTTCTAAGCATAGAATATT-TAGAAAGTTGCTCCAAGGAATGTATCGTCTT
96 ----ATG---CGATTTCCCAAGCATGGAATGTTCGA-AAAATTGCTCGAAGGAGTGGATCGTCTT
* * * *
21091010 GAATA-TTGTAAGGAACCGAATTTATAAAAGAACTCGTAAAATTTTGATAAGTTCAAAAGTTTGT
153 GAATACTT-TAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTG--AAG----AAA--TT-A
* * * *
21091074 CTAAGAACCAAGAGAGAAACAATTCTCATGTAAAAAAGTTCTTTTAATTCAAACACAAAAACTTG
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * *
21091139 TTCACAAAATGATAAACTATTTATACCAAATAATGCGATTTCCCGAA-CATGGAATGTTCGAAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCC-AAGCATGGAATGTTCGAAAA
*** * * * *
21091203 ATAATTTGAAGGAGTGGATTGTCTTGAATACTTTAAGGAACCGAAGTTGTAAAAGAACTCGTAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
21091268 AGTTTGATTAGTTCGAAAGTTCA
193 AGTTTGA--A----GAAA-TT-A
** * * * * * *
21091291 TCAAAGAACCAAGGGAG-AACAATCCTCACGTAAATAAG-T-ATTTAATTCAAAGACTAAAAGTT
1 -C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* * * ** * * *
21091353 GTTTACAAATTGACAAACTATTCAGAGTAAATGATGCAATTTCTCGAGCATGGAATGTTCGAAAA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * * * *
21091418 ATTGCTCGAAGGAATGGATCGTCTTTAATACTATAAGGAACC-AAGTTATAAAATAACTCATAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
* *
21091482 TGTTTGAA-AAGTT-
193 AGTTTGAAGAAATTA
* * * *
21091495 CGGAAGTTCATCCAAGAGCCAAGAGAAACAATTCTCACGTAAATAAGTT-TTCATT--TTTAAAG
1 C--AAG---AACC-A-A--C-AGAGAAATAATTCTCACGTAAATAAGTTCTT--TTAATTCAAAC
* * * * * *
21091557 ACCAAAACTTGTTTACAAAATGAAAAAACTATTTAGACTAAATGATGCGATTTCCCGAGAATAGA
54 ACAAAAACTTGTTTACAAAAT-AACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGA
* * *
21091622 ATGTTC-AAAAATTGCTC-AATGGAATGGATCGTTTTGAATACTTTAAGGAACCGAAGTTATAAA
117 ATGTTCGAAAAATTGCTCGAA-GGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAA
*
21091685 AGAACTCGTAAAAGTTTGACAAGTTTGGAAGTTCA
181 AGAACTCGTAAAAGTTTG--AA-----GAAATT-A
* * * * * * *
21091720 TCCAAGAACCGAGAGAGAAACAACTCTCACGTAAATAAG-T-ATTTAATTCAAAGAC-CAAACTT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
** ** * ** * * *
21091782 GTTTACAAAAGGACAAA-TAATTTAAAAAAATGATGTGATTTTTCGAGCATAGAATGTT-TAGAA
64 GTTTACAAAATAACAAACT-ATTTAACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AA
* * * * * * * *
21091845 AGTTGCTCGAAGGAATGTACCATCTTGAATAATGTAAGGAACCGAAGTTATAAAAGAACTCGTAA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA
* * *
21091910 ATGCTTGACAAGTTCGGAAGTTCA
192 AAGTTTG--AA-----GAAATT-A
* * * * *
21091934 TCCAAGAACC-AC-GAGAAACAATTCTCACGT--A-AA--T-TTTTGATTTAAAGACCAAAACTT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* * * * ** * * * *
21091991 GTTTCCAAAATGACAAACTTTTTAGACCAAATGCTGTTA-TTCCCGAGAACGGAATGTTCAAAAA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * * * * * * *
21092055 ATTGATCAAAGGAATGGATCATCTTGAATA-TTTAAGGAATCGAAGTTATGAAAGAACTCATAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
21092119 AGTTTGACCAGTTCGAAAGTTCA
193 AGTTTGA--A----GAAA-TT-A
* * * *
21092142 TCCAAGAACCAAGAGACAAAACAACTCTCACGTAAATAAG---TTTTAATTCAAACA-ATAAAAC
1 --CAAGAACCAACAGA-GAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAAC
* * * * * * * * *
21092203 TTTTTTATAAAATGACAAACTTTTTAGACCAAATAATGCCATTTCCCATGCATGAAATATTC-AG
62 TTGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-
* * * * * *
21092267 AAAACTGCTCAAAGGAATGGATCGTCTTGAATACTTTATGGAACTGATA-TTATAAAA-AAGCTC
125 AAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAAC-CAAAGTTATAAAAGAA-CTC
*
21092330 GTAAAAGTTTGACAGGTTTGGAAGTTCA
188 GTAAAAGTTTGA-A------GAAATT-A
* * * * * *
21092358 TCCAAGAACCAAAAGAGAAACAATTCTCACATAAATGAG-T-ATTTAATTCAAATACAAAAACTT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
** * ** **** * *
21092421 GTTTACAAAAGGACAAACAATTTAGAAAAAATGATGCGATTTTTTGAGCATAGAATGTT-TAGAA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AA
** * * ** * *
21092485 TGTTGCTCGAAGGAATGTATCGTCTTGAATACGGTAAGGAA-TAGAAGTTATAAAAGAACACGTA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCA-AAGTTATAAAAGAACTCGTA
*
21092549 AATGTTTGACAGGTTCAGAAGTTCA
191 AAAGTTTGA-A-G---A-AA-TT-A
* * * *
21092574 TCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAGTT-TTTT-ATTCAAAGACCAAAATTT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* * * * * *
21092635 GTTT-CAAAATGACAAACT-TCTTGAACCAAATGCTGCTATTTCCCGAGAATGGAATGTT-TAGA
64 GTTTACAAAATAACAAACTAT-TT-AACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-A
* * *** * *
21092697 AAATTGCTCGAAGGAATGGATCGTCTTCAATACTTTAAGGAATTGAAGTTATGAAAGAACTCATA
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTA
*
21092762 AAATTTTGACCAGTTCAAAAGTT-
191 AAAGTTTGA--AG----AAA-TTA
* * *
21092785 CGTGTAAGAATCAAGAGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAACA-ACAAAA
1 C----AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAA
* * * * ** ** * * *
21092847 CTTTTTTACAAAATGACACATTATTTATATAAAATGATGTC-ATTTCCTGATCATGTAATGTT-T
61 CTTGTTTACAAAATAACAAACTATTTA-ACCAAATGATG-CGATTTCCCAAGCATGGAATGTTCG
* * * *
21092910 AGAAAATTGCTCGAAGGAATGGATCGTCTTGAATAATGTAAGGAACCAAAGTTATAAAACAACTC
124 A-AAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTC
* *
21092975 GTAAAAGTTTGACCAGTTCGGAAGTTCGTC
188 GTAAAAGTTTGA--A-----GAA-AT--TA
** * * * *
21093005 CAAGAA-CAA-AGAGAAGCAATTCTCACGTAAATAA---ATTTTGATTCAAAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * * *
21093065 TT-CTAAAATGAA-GAACTATTTAGACCAAATGCTACTATCTCCCGAGAATGGAATGTTC-AGAA
66 TTAC-AAAAT-AACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AA
* ** * * *
21093127 AATTGCTCGAAGGAATGGATCGTCTTGAATACTTT-AGGAGTCGAAGGTATCAAAGAACTCGTAA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA
** *
21093191 AAGTTTG-ACCAGTT-
192 AAGTTTGAAGAAATTA
* * * * * *
21093205 CAA-AATTCGTCCA-AGAGAAACAATTCTCACGTAAA-AAG-T-GTTTAATTCAAAGACCAAAAG
1 CAAGAA--C--CAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAAC
* * * *
21093265 TTATTCACAAAATAACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTGAA
62 TTGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAA
* * * * ** *
21093330 AAATTGCTCTAAGGAATGGATCGTCTTGAATACTCTAAGAAACTGAAGTTATAAAAGAACTCATA
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTA
* *
21093395 AAAGTTTGAAAAGTTCGGAAGTTCGT
191 AAAGTTTG--AA-----GAAATT--A
* * * * * * **
21093421 CAAAGAACCAAAAGAGAAACAATTTTCACGT-AATAAG-T-GTTTAATCCAAAGATC-AAAGTTT
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACA-CAAAAACTT
* * * * * * *
21093482 TTTTACAGAATGACACACTATTTATACAAAATGATGTC-ATTTCCCGAGCATGGAATGTT-TAGA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATG-CGATTTCCCAAGCATGGAATGTTCGA-A
* * * * * ** * *
21093545 AAATTGCTCGATGGAATGGATTGTCTTGAATAATGTAAGGAACTGAAGTTATAAAAAAAACTCAT
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTAT-AAAAGAACTCGT
* *
21093610 -AAAGTTTGACAAGTTCGGAAGTTCGTT
190 AAAAGTTTG--AA-----GAA-AT--TA
* * * * * * *
21093637 CAACAACC-A-AGAGAAACAATTCTCACGTAAATAA-AT-TTTTGATTCACAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * *
21093698 TTCCAAAATGAA-GAACTATTTAGACCAAATGATGCTATCTT-CCGAGAATGAAATGTTC-ATAA
66 TTACAAAAT-AACAAACTATTTA-ACCAAATGATGCGAT-TTCCCAAGCATGGAATGTTCGA-AA
* * * * * * *
21093760 AA-TGCT-GGAGAAATGGATCGTCTTGAATGCTTTAAGGAGCCGAAGTTATGAAAGAACTCGTAA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA
21093823 AAGTTTGATCAGTTCAAAAGTTTA
192 AAGTTTGA--AG----AAA--TTA
* * *
21093847 TCCAAGAACCAAGAGAGAAA-CATTCTCAC----A-AAG-T-TTTTAATTCAAA-AAACAAAACT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAACT
* * * *
21093903 TTTTTACAAAATGACAAACTATTTAGACCAAAATGATGTGATTTCCCAAGCATGAAATGTTCG-A
63 TGTTTACAAAATAACAAACTATTTA-ACC-AAATGATGCGATTTCCCAAGCATGGAATGTTCGAA
* * * * *
21093967 AAATTGCTCGAAGGAATGGATCGTCTTGAGTACTCT-AGAAACCGAAGTTATAAAAGAACTCGTA
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTA
* * *
21094031 AAAGTTTGAGGAACTTCGT
191 AAAGTTTGAAGAAATT--A
* * * * * * * *
21094050 CAAAGAACCAATAGAGAAACAATTCTCACGT-AATAAG-T-GTTTAATCCAAAGACCAAAAGTTT
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * * * * *
21094112 TTTACAAAATGACATACTATTTATACCAAATGATGCCATTTCCCGAGCATGTAATATTTAGAAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAAT-GTTCGAAAA
* * * * *
21094177 ATTGCTCGAAGGAATGGATCGTCTTGAGTACTCTAAGAAACCGAAGTTATAAAAAGAACTCGTAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTAT-AAAAGAACTCGTAA
*
21094242 AAGTTTGAAAAGTTTGGAACTTCGTCAAA
192 AAGTTTG--AA-----GAA-AT--T---A
* ** * * * *
21094271 GAAAGAACCAATTGAGAAACAATTCTCACGTAAATAA---ATTTTGATTCAAAGACAAAAACTTT
1 -CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAAC---
* * * * ** *
21094333 GTTGTTTCCAAAAT---GAA-TATTTAGACCAAATGATGCTATCTCCGGAGAATGGAATGTTC-A
62 -TTGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA
* * * *
21094393 GAAAATTGCTCGACGGAATGGATCGTCTTGAATACTTGAAGGAA-CAGAAGTTATGAAAGAACTC
125 -AAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCA-AAGTTATAAAAGAACTC
*
21094457 GTAAAAGTTTGACAAGTTCGAAAGTTCTTC
188 GTAAAAGTTTG--AA----GAAA----TTA
* * * * * *
21094487 CAAGAATCAAGAGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAACAAAACAAATTTT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAA-AAACTTG
* * * * * *
21094550 TTTCACAAAATGACAAACTATTTAGACAAAATGATGCAATTTCCCGAGCATGGAATGTTTGGAAA
65 TTT-ACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * * * * *
21094615 ATTGCTCGAAGGAATGGACCATCTTGAATACTTTATGGAACTGAAA-TTATAAAAGAAGTCGTAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAAC-CAAAGTTATAAAAGAACTCGTAA
* * *
21094679 AAGTTTAACAAGTTCGAATGTTCGT
192 AAGTTT--GAA----GAA-ATT--A
* * * * * * * * * *
21094704 CAAAGAACTAAGAGTGAAACAATTCTCACGT-AATAAG-T-GTTTAATCCAAAGACCAAAAGTTT
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * * * * *
21094766 TTTACAAAATGACAGACTATTTATACCAAATGATGCCATTTCTCGAGCATGTAATGTTCAAAAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAA
* * * * * * * *
21094831 GTGCTCGAAGGAATGGATCATCTTGAATAATGTAAGGAGCCGAAGTTATAAAATAACTCGTAAAA
129 TTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAA
*
21094896 GTTTGACAAGTTCGAAAGTTCGTC
194 GTTTG--AA----GAAA--T--TA
* * * * *
21094920 CAAGAACC-A-AGAGGAACAATTCTCACGTAAATAAG-T-TTTTGATTCAAAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * * * * * * *
21094981 TTCCAAAGTGAA-GAACTATTTCGACTAAATGTTACTATCTCCCGAGAAT-GAATGTTC-AGAAA
66 TTACAAAAT-AACAAACTATTT-AACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AAA
* * * * * * * *
21095043 ATTGATCGAAGGAATGCATCATC-TGAATGCTTTAAGGAGCCGAAGTTATGAAAGAACTCGTAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
*
21095107 AGTTTGACCAGTTCGAAAGTTCTTC
193 AGTTTGA--A----GAAA----TTA
* * * *
21095132 CAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAGCA-ACAAAACTTT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAACTTG
* * * * *
21095194 TTTAGAAAAAATGACAAACTATTTAGACCAAATGATGCGA--TCCC-AGCATGGAATATTTGGAA
65 TTT--ACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAA
* * * ** *
21095256 AATTGCTCGAAGGAATGGATCGTCTTGAATACATTATGGAACTGAA-TTATAAAAGAACTCGCAA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA
* *
21095320 AAGTTTAACAAGTTTGAAAGTTCGTC
192 AAGTTT--GAA----GAAA--T--TA
* * * * * * *
21095346 CAAGAACCAAAAGACAAAAAAAATTCTCACGTAAATAAG-T-ATGTAATTCAAAGAC-CAAACTT
1 CAAGAACCAACAG--AGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* * * * * * * *
21095408 TTTTACAAAATGACAAACAATTTAGA-AAAATGATGCGATTTTCCGAGCATAGAATGTT-TAGAA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AA
* * * *
21095471 AGTTGCTCGAAGGAATGTATCGTCTTGAATA-TTGTAAGG-A--GAAGTTATAAAAGAACTCGTA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTT-TAAGGAACCAAAGTTATAAAAGAACTCGTA
*
21095532 AAA-TTTGACTAGTTCAGAAGTTTTT
191 AAAGTTTGA--AG---A-AA---TTA
* * * * *
21095557 CTAAGAACCAAGAGAGAAACAATTCTCATGTAAAAAAATTCTTTTAATTCAAACACAAAAACTTG
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * * * ** *
21095622 TTTACAAAATGACAAACTAATTATGCCAAATGATGTGATTTCCCGATTATGGAATGTTCGGAAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAA
* * ** *
21095687 TAGCTTGAAGGAG-GGA-CTGTCTTGAATACTTTAAGGAACTGAAGTTGTAAAAGAACTCGTAAA
129 TTGCTCGAAGGAGTGGATC-GTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
* *
21095750 AGTTTGATTAGTTCGGAAGTCGTC
193 AGTTTGA--A-----GAAAT--TA
* * ** * * * * * * *
21095774 CAAAGAAACAA-AGGGAGAGCAATCCTCAAGTAAAT-AGGT-GTTTAATTCAAAGACCAAAA-GT
1 C-AAGAACCAACAGAGA-AATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* * * *
21095835 ATTTACAAAATGACAAACTATTTAGAGCAAATGATGCGATTTCCCGAGCATGGAATGTT-GAAAA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * * * * *
21095899 ATTGCTCGAAAGAATGAATCGTCTTGAATACTGTAAGAAACC-GAGTTATAAAAGAACTCGTAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
*
21095963 AG-TTGAA-AAGTT-
193 AGTTTGAAGAAATTA
* * * * *
21095975 CGGAAGTTCATGCAATAGTCAAGAGAAACAATTCTCACGTAAATAAGTT-TTCTT--TTTAAAGA
1 C--AAG---A-ACCA-A--C-AGAGAAATAATTCTCACGTAAATAAGTTCTT-TTAATTCAAACA
* * * * *
21096037 CCAAAACTTGTTTACAAAATGAA-AAACTATTTTGACTAAATGATGCTATTTCCCAAGAATGGAA
55 CAAAAACTTGTTTACAAAAT-AACAAACTA-TTTAACCAAATGATGCGATTTCCCAAGCATGGAA
* * * *
21096101 TGTT-TACAAATTGCTC-AATGGAATGGATCGTCTTGAATACTTT-AGGAACCGAAGTTATAAAA
118 TGTTCGAAAAATTGCTCGAA-GGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAA
* * * *
21096163 AAACTTGTAAAAGTTTGACAAGTTTGGAAGTCTGTC
182 GAACTCGTAAAAGTTTG--AA-----GAA--AT-TA
* * * * * *
21096199 CAAGAACCGAGAGAGAAACAATTCTCACGTAAATAAG-T-ATTTAATTCAAAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
** * * * ** * ******
21096262 TTACAAAAGGACAAACAATTTAGA-AAAATGAAGCGATTTTTCGAGNNNNNNNNNNNNNNNNNNN
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAG-------------CATGGA
*****************************************************************
21096326 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
117 ATGTTCGAAAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAA
**************** *
21096391 NNNNNNNNNNNNNNNNGTAA-AAGTTTGA
182 GAACTCGTAAAAGTTTG-AAGAA-ATT-A
* *
21096419 CAAGTTTGGAAGTTCGTCCAAGAACAAAGAGAGAAACAATTCTCATGTAAATAAG-T-TTTT-AT
1 CAA-----GAA------CC---AAC----AGAGAAATAATTCTCACGTAAATAAGTTCTTTTAAT
* * * * * * *
21096481 TCAAAGACCAAAACTTGTTTAC-AAATGACAAACAATTTAGACCAAATGATACGAGTTCCCGAGC
48 TCAAACACAAAAACTTGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGC
* * * ** * *
21096545 ATGGGAATGTT-TAGAAATTGCTCGAATGAAAGGATCGTCTTGAATACTTTAAGGAATC-GAGTG
112 AT-GGAATGTTCGAAAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGT-
* *
21096608 TA-AAAACGAACTCGT-AAAGTTGGACAAGTTCAAAAGTTCGTC
175 TATAAAA-GAACTCGTAAAAGTTTG--AAG----AAA--T--TA
** * * * * * * *
21096650 CAAGAA-TTA-AGGGAAACAATTCTCACGTAAATAAGTT-TTTGATTTTAAAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
** * * * * * *
21096712 TTACAAAATGGCAATCTATTTAGACCAAATTATGCGATTTCCCGAGAATGTAATGTTCAGAAAAT
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTC-GAAAAA
* * * * * * *
21096777 TTGCTCGAA-GAGTCGATCATCTTGAATACTTTAAGGAATCGATGTTATAAAAGAATTC-TTAAA
129 TTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAA
*
21096840 GTTTGACAAGTTCAGAAGTTCGTC
194 GTTTG--AAG---A-AA--T--TA
** * * * *
21096864 CAAGAACC-A-AGAGAAGCAATTCTCACGTAAAAAAG-T-TTTTGATTCAAAGACCAAAAACTAG
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACA-CAAAAACTTG
* ** * * * **
21096925 TTTACAAAATGAC-AACTAAATAGACAAAATGATGAGACTTCCCAATAATGGAATGTTC-AGAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AAA
* * * ** * * ** *
21096988 A-TGCTCAAAGGA-TGGATCGAAAGAGCTCGTAAGT--TTTACA-GTTCGGAAA-TTCGTCCAAT
128 ATTGCTCGAAGGAGTGGATC----G-TCTTG-AA-TACTTTA-AGGAAC-CAAAGTT-ATAAAAG
* * *
21097047 AAC-C--AAGAG--AGAA-AAATTCT
183 AACTCGTAAAAGTTTGAAGAAATT-A
* * * ** * * * * *
21097067 CACGTA--AAGA-ATG-TTTAAAT-TCAAG-ACCAA-AAG-T-TTTT--TCCAAA-AGGACAAAC
1 CAAGAACCAACAGA-GAAATAATTCTCACGTA--AATAAGTTCTTTTAATTCAAACA-CAAAAAC
* * * ** ** * * ** * *
21097120 -TATTTAGACCAAT-TGATGCGATTT-CCCGAGCGTGGAATGTTCAGAAAATTGCTCCAAGGAAT
62 TTGTTTACA-AAATAACAAACTATTTAACC-A-AAT-G-ATG--C-G---ATTTC-CCAA-GCAT
* * * *** * * *
21097182 GG-ATCGTCTTG-AATACTG-T--AAGGAACCGA-AG--TT--ATA----AATGAA-C--A--CA
114 GGAAT-GT-TCGAAAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTA
** * * *
21097228 TAAAAG-TTTTG-ACAAGTTTGGAAG--TTTA
177 TAAAAGAACTCGTAAAAGTTT-GAAGAAATTA
* * * *
21097256 TCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAAAAG-T-TTTTAATTTAAA-AGGCAAAAAC
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACA--CAAAAAC
* * * * * * * *
21097318 TT-TTTACAAAATGACAAACAATTTAGA-AAAATAATGCGATTT-TCGAGCATAGAATGTTAG-A
62 TTGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAA
* * * * * ** * * ** *
21097379 AAGTTGCTCGAAGGAATGTATCATC-TGAA-GCTGCAGGGAATCGGAGTTATAAAAGAACTCAAT
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTC-GT
* *
21097442 AAAAGTTTGAAAAGTTCGGAAGTTTGTC
190 AAAAGTTTG--AA-----GAA--AT-TA
* * * *
21097470 CAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAG-T-TTTTGATTCAAATACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * * * *
21097531 TTCCAAAATGACAAACTATTTAGACCAAATGCTGCTATTTCCCGAGAATGAAATGTTCAAAAAAT
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAAT
* * * * * * *
21097596 TGCTCAAAGGAATGGATCATCTTGAATACTTTAAGAAACC-GAGTTATGAAAGAACTGGTAAAAG
130 TGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAG
*
21097660 TTTGACAAGTTCGAAAGTTCGTC
195 TTTG--AA----GAAA--T--TA
* *
21097683 CAAGAA-CAAGAGAGAAATAATTCTCACGTAAATAAG-T-TTTTAATTCAAACAACAAAACCTT-
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAAC-ACAAAAACTTG
* * *
21097744 TTTAC-AAATGACAAACTATTTAGACCAAATGAATGCGATTTCTCGAGCATGGAA--TTCGAAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATG-ATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * * * * *
21097806 ATAGCTCGAAGAGAATGGATTGACTTGAATACTTTATGGAACCGAAA-TTATAAAAGAACTTGTA
128 ATTGCTCGAAG-GAGTGGATCGTCTTGAATACTTTAAGGAACC-AAAGTTATAAAAGAACTCGTA
21097870 AAAGTTTGAGAAATCGAAAGTTCA
191 AAAGTTT--G-AA--GAAA-TT-A
* * * * * * * *
21097894 TCCAAGAACTAAAAG-GAAACAA-GCTCACGTAAATAAG-T-GTTTAATTCAAAGACCAAAAGTT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* * *
21097955 GTGTACAAAATAACAAACTATTTAGACAAATGATGATGCGATTTCCCGAGCATGGAATGTTCGAA
64 GTTTACAAAATAACAAACTATTTA-ACCAA--ATGATGCGATTTCCCAAGCATGGAATGTTCGAA
* * *
21098020 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGAAACCAAAGTTATAAAAGAACTCATA
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTA
*
21098085 AAA-TTTGAAAAGTTCAATAGTTCGT
191 AAAGTTTG--AAG---AA-A-TT--A
* * * *
21098110 CAAAGAACCAAGAGAGAAA-CATTCTCACGT-AATAAG-T-TTTTAATCCAAAGACCAAAAGTTT
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACA-CAAAA----
** * * ** *
21098171 TTTTTTTTAC-AAATGACACACACTATTTATACCAAATGATGTC-ATTTCCTGAGCATGTAATGT
60 ACTTGTTTACAAAAT-A-ACAAACTATTTA-ACCAAATGATG-CGATTTCCCAAGCATGGAATGT
* * * * * *
21098234 T-TAGAAAATTGCTCGAATGAATGGATTGTCTTGAATAATGTAAGGAACCAAAGTTATAAAAGAA
121 TCGA-AAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAA
* * * *
21098298 ATCGGAAAAGTTT-AACAAGTT-
185 CTCGTAAAAGTTTGAAGAAATTA
* * ** * * **
21098319 CGGAAGTTCGTCCAAGCACCAAGAGAAACCATTCTCATGT-AATAA--T-TTTTGATTCAAAGGC
1 C--AA----G---AACCAAC-AGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACAC
* * * * * *
21098380 -AAAACTTGTTTCCAAAATGAA-GAACTATTTAGACCAAATGCTGCTATCTCCCGAG-ATGGAAT
56 AAAAACTTGTTTACAAAAT-AACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAAT
* * * * *
21098442 GTTC-AGAAAGTGCTCGAAGGCA-TGGATCATCTTGAATGCTTTAAGGAACCGAAGTTAT-AAAG
119 GTTCGAAAAATTGCTCGAAGG-AGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAG
*
21098504 AACT-GTAAAAGTTTGACAAGTTCGAAAGTTCTTC
183 AACTCGTAAAAGTTTG--AA----GAAA----TTA
* * * * *
21098538 CAAGAACCAAGAGAGAAACAATTCTTACGT--ATAAGTT-TTTTAATTCCCAAGAGAGAAACAA-
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATT--CAA-ACACAAA-AAC
* * * * * * ** * ** ** ** *** *
21098599 TT-CTTAC---GTAACTAAGTTTTTAATTCAATCAACAAGACTTTTTTACAAATAACAAACTATT
62 TTGTTTACAAAATAACAAACTATTTAA-CCAA--ATGATG-CGATTTCCCAAGCATGGAA-TGTT
* * * * * *
21098660 AGACCAAATGATGCGATTTCCG-AGCA-TGGAAT-GT-TTTAAAAATTGATCGAAGGAATGGATC
122 CGA-AAAAT--TGC----T-CGAAGGAGTGG-ATCGTCTTGAATACTT--T--AAGG-A---A-C
* *
21098721 GTCTTGAATACATTATGGAACTGAATTATAAAAGAACTCGTAAAAAG-TTGACAAGTTCGGAAGT
169 --C------A-A--A--G--TT-----ATAAAAGAACTCGT-AAAAGTTTG--AA-----GAA-A
*
21098785 TCGTC
205 T--TA
* * * * * * * * *
21098790 CAAGAACC-ACAATAGAAACAACTCTCACGTAAATAAG-T-ATGTAATTCGAAGACCAAAACTTT
1 CAAGAACCAAC-AGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * * * * * * *
21098852 TTTACAAAATGACAAACAATTTAGA-AAAATGATACGATTTTCTAAGCA--AAATATT-TAGAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AAA
* * * * * *
21098913 GTTGCTCCAAGGAATGTATCGTCTTG-ATA-TTGTAAGGAACCGAATTTATAAAAGAACTCGT-A
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTT-TAAGGAACCAAAGTTATAAAAGAACTCGTAA
* *
21098975 AATTTTGATAAGTTCAAAAGTTTGT
192 AAGTTTG--AAG----AAA--TT-A
* * *
21099000 CTAAGAACCAAGAGAGAAACAATTCTCA-GTAAAAAAGTTCTTTTAATTCAAAC-CACAAAACTT
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAACTT
* * * *
21099063 GTTCACAAAATGATAAACTATTTATACC-AATAATGCGATTTCCCGAA-CATGGAATGTTCGAAA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCC-AAGCATGGAATGTTCG-AA
* * *
21099126 ATAATT--T-GAAGGAGTGGATTGTCTTGAATACTTTAAGGAACC-GAGTTGTAAAAG-ACTCGT
126 A-AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGT
21099186 AAAAGTTTGATTAGTTTCGAAAGTTCA
190 AAAAGTTTGA--A-----GAAA-TT-A
* * * * * *
21099213 TCAAAGAACCAA-GGAG-AACAATCCTCACGTAAATAAG---TTTTAATTCAAAGAC-TAAAGTT
1 -C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* * * * * *
21099272 GTTTACACAATTGACAAACTATTCAGACACCAAAATTGATGCAATTTCTCGAGCATGGAATGTTC
64 GTTTACA-AAATAACAAACTATT--TA-ACC-AAA-TGATGCGATTTCCCAAGCATGGAATGTTC
* * * *
21099337 GAAAAATTGCTCGAAGGAATGGATCGTCTTAAATACTATAAGGAACC-AAGTTATAAAATAACTC
123 GAAAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTC
* * *
21099401 AT-AATGTTTGAAAGTTCGGAAGTTCA
188 GTAAAAGTTTG-AA-----GAAATT-A
* * * * * *
21099427 TCCAAGAGCC-A-AGAGAAACAATTCTCACGTAAATAAGTT-TTCATTCATTTTAAGAGACCAAA
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTT--TT-AATTCAA-ACACAAAA
* * * * *
21099489 ACTTGTTTACAAAATGAA-AAACTATTTAGACTAAATGATGCGA-TTCCCGAGAATAGAATTTTC
60 ACTTGTTTACAAAAT-AACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTC
* * * *
21099552 -AAAAATTGCTC-AATGAATGGATCGTTTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
123 GAAAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTC
*
21099615 GT-AAAGTTTGACAAGTTGGAAGTTCA
188 GTAAAAGTTTG--AA----GAAATT-A
* * * * * * * *
21099641 TCCAAGAACCGAGAGAGAAA-CACTCTCACGTAAATAAG-T-ATTGAATTCAAAGACCAAAACTT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
** * ** * * *
21099703 GTTTACACAAA-AGGACAAA-TAATTTAAAAAAATGATGTGATTTTTTCGAGCATAGAATGTTTA
64 GTTTACA-AAATA--ACAAACT-ATTTAACCAAATGATGCGA-TTTCCCAAGCATGGAATG-TTC
** * * * * * * *
21099766 GAAAGTTTGCTCGAAGGAATGTACCATCTTGAATAATGTAAGGAACCGAAGTTATAAAAGAACTC
123 GAAAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTC
* * *
21099831 GTAAATGCTTGACAAGTTTCGGAAGTTCA
188 GTAAAAGTTTG--AA------GAAATT-A
* * * * *
21099860 TCAAGAACC-AC-GAGAAACAATTCTCACGTAAAT---TT-TTTTGATTTAAAGACAAAACCTTG
1 -CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * ** * * * *
21099919 TTTCCAAAATGAC-AACT-TTTAGACCAAATGCTGTTATTTTTCCCGAGAACGG-ATGTTCAAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGA--TTTCCCAAGCATGGAATGTTCGAAA
* * * * * * *
21099981 AATTGATCAAAGGAATGGATCATCTTG-ATA-TTTAAGGAATCGAAGTTATGAAAAGAACTCATA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTAT-AAAAGAACTCGTA
21100044 AAAGTTTGACCAGTTCGAAAGTTCA
191 AAAGTTTGA--A----GAAA-TT-A
* * * *
21100069 TCCAAGAACCAAGAGACAAACAACTCTCACGTAAATAAG-T-TTTTAATTCAAACA-ATAAAACT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAACT
* * * * * * *
21100131 TTTTTATAAAATGACAAACTTTTTAGACCAAATAATGCCATTTCCCAATGCAT-GAATATTC-AG
63 TGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAA-GCATGGAATGTTCGA-
* * * * * * *
21100194 AAAACTGCTCAAAGGAATGGATCGTCTTGAATACTTTATGGAACTGATA-TTATAAAA-AGCTCG
125 AAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAAC-CAAAGTTATAAAAGAACTCG
*
21100257 TAAAAGTTTGACAGGTTTGGAAGTTCA
189 TAAAAGTTTGA-A------GAAATT-A
* * * * * * *
21100284 TCCAGAACCAAAAGAGAAA-CATTCTCACAT-AATGAG-T-ATTTAATTCAAATACAAAAACTTG
1 -CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
** * * **** * *
21100345 TTTACAAAAGGACAAACAATTTAGA-AAAATGATGCGATTTTTTGAGCATAG-ATGTT-TAAGAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAA-AA
* * * ** * *
21100407 TGTTGCTCGAAGGAATGTATCGTCTTGAATACGGTAAGGAA-TAGAAGTT-TATAAAGAACACGT
128 -ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCA-AAGTTATA-AAAGAACTCGT
*
21100470 AAATGTTTGACAGGTTCAGAAGTTCA
190 AAAAGTTTGA-A-G---A-AA-TT-A
* * * * *
21100496 TCAAGAACC-A-AGAGAAACAATTCTC-CGTAAATAAGTT-TTTTTATTCAAAGACCAAAATTTG
1 -CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * * * * * *
21100557 TTT-CCAAATGACAAACT-TCTTGAACCAAATGCTGCTATTTCCCGAGAATGGAATGTT-TAGAA
65 TTTACAAAATAACAAACTAT-TT-AACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * *** * * *
21100619 ATTGCTCGAAGGAATGGATCGTCTTCAATACTTTAAGGAATTGAAGTGATGAAAGAACTCATAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
*
21100684 ATTTTTGACCAGTTCAAAAGTT-
193 A-GTTTGA--AG----AAA-TTA
* * * *
21100706 CGTGTAAG-ATCAAGAGAGAAACAATTCTCACGTAAATAAG---TTTTAATTCAAACAC-CAAAC
1 C----AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAAC
* * * * ** ** * *
21100766 TTTTTTATTACAAAATGACACATTATTTATATAAAATGATGTC-ATTTCCTGATCATGTAATGTT
62 --TTGT-TTACAAAATAACAAACTATTTA-ACCAAATGATG-CGATTTCCCAAGCATGGAATGTT
* * * * * * *
21100830 -TAGAAATTGCTCGAAGGAATGGATCGTCTTGAATAATGTAAGGAACCAAATTTAT-AAACAACT
122 CGAAAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACT
* *
21100893 CGTAAAAGTTTGACACAGTTCGGAAGTTCGTC
187 CGTAAAAGTTTG--A-A-----GAA-AT--TA
** ** * * *
21100925 CAAGAA-CAA-AGAGAAGCAATTCTCACGTAAATAAAAT-TTTTGATTCAAAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * * * * *
21100987 TT-CTAAAATGA-GAACTATTTAGACCAAATGCTACTATCTCCCGAGAATGGAATGTTC-AGAAA
66 TTAC-AAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAA
* ** * * *
21101049 TTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAGTCGAAGGT-T-CAAGAACTCGT-AAA
129 TTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAA
** *
21101111 GTTTG-ACCAGTTCA
194 GTTTGAAGAAATT-A
* ** * * * * * *
21101125 AAAGTTCGTCCA-AGAGAAACAATTCTCACGTAAATAAG-T-GTTT-ATTCAAAGA-ACCAAAGT
1 CAAGAAC--CAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAACT
* * * *
21101185 TATTCACAAAATAACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTGAAA
63 TGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCG-AA
* * * * ** *
21101250 AAATTGC-CTAAGGAATGGATCGTCTTGAATACTCTAAGAAACTGAAGTTATAAAAGAACTCATA
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTA
* *
21101314 AAAGTTTGAAAAGTTCGGAAGTTCGT
191 AAAGTTTG--AA-----GAAATT--A
* * * * *
21101340 CAAAGAACCAA-AGAGAAACAATTTTCACGT-AATAAGTGT-TTTGTAAAATCCAAGATC-AAAA
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGT-TCTTT-T-AATTCAAACA-CAAAAA
* * * * * * *
21101401 GTTTTTTAC-AAATGACACACTA-TTATACAAAATGATGTC-ATTTCCCGAGCATGGAATGTT-T
61 CTTGTTTACAAAATAACAAACTATTTA-ACCAAATGATG-CGATTTCCCAAGCATGGAATGTTCG
* * * ** **
21101462 AGAAAATTGCTCGATGGAATGGATTGTCTTGAATA-AGTAAGGAACTGAAGTTATAAAA-AACTC
124 A-AAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTC
* * *
21101525 AT-AAAGTTTGACAAGTTCGGAAGTTCGTT
188 GTAAAAGTTTG--AA-----GAA-AT--TA
* * * * * * *
21101554 CAACAACC-A-AGAG-AACAATTCTCACGTAAATAA-AT-TTTTGATTCACAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * * *
21101614 TTCCAAAATGAA-GAACTATTTAGACCAAATGATGCTATCTT-CCGAGAATGAAATGTTC-ATAA
66 TTACAAAAT-AACAAACTATTTA-ACCAAATGATGCGAT-TTCCCAAGCATGGAATGTTCGAAAA
* * * * * *
21101676 ATTGCT-GAAGAAATGGATCGTCTTGAATGCTTTAAGGAGCCGAAGTTATGAAAGAACTCGTAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
*
21101740 AGTTTGATCATTTCAAAAGTTTA
193 AGTTTGA--A----GAAA--TTA
* * *
21101763 TCCAAGAACCAAGAGAGAAACAATTCTCAC----ATAAG-T-TTTTAATTCAAA-AAACAAAACT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAACT
* * * *
21101821 TTTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCC-AGCATGAAATGTTCGAAA
63 TGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAA
* * * * *
21101885 AATTGCTCGAAGGAATGGATCGTCTTGAGTACTCT-AGAAAACCGAAGTTATAAAAGAACTCGTA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAG-GAACCAAAGTTATAAAAGAACTCGTA
* * *
21101949 AAAGTTTGAGGAACTTCGT
191 AAAGTTTGAAGAAATT--A
* * * * * ** *
21101968 CAAGAACCAATAGAGAAACAATTCTCACGT-AATAAG-TGTTTTAATCCAAAGACAAAAGTTTTT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * * *
21102031 TTACAAAATGACATACTATTTATACCAAATGATGC-ATTTCCCGAGCATGTAATTTTAG-AAAAT
66 TTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAAT
* * * * *
21102094 TGCTCGAAGGAATGGATCGTCTTGAGTACTCTAAGAAACCGAAGTTAT-AAAGAACTCGTAAAAG
130 TGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAG
* *
21102158 -TTGAAAAGTTTGGAACTTCGT
195 TTTG--AA-----GAAATT--A
** * * * * *
21102179 CAAAGAACCAATTGAGAAACAATTCTCACGTAAATAA-AT-TTTTGATTCAAAGAC-ACAACTTG
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * * * **
21102241 -TTCCAAAATGA-ATA-T-TTTAGACCAAATGATGCTATCTCCGGAG-ATGGAATGTTC-AGAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-AAA
* * * *
21102300 ATTGCTCG-ACGAATGGATCGTCTTGAATACTTGAAGGAA-CAGAAGTT-TATGAAGAACTCGT-
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCA-AAGTTATA-AAAGAACTCGTA
*
21102361 AAAGTTTGACAAGTTCGAAAGTTCTTC
191 AAAGTTTG--AA----GAAA----TTA
* * * * * *
21102388 CAAGAATCAAGAGAGAAACAATTCTCACGTAAAT-AG-T-TTTTAATTCAAACA-ACAAATTTTT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * * * *
21102449 TTCACAAAATGACAAACTATTTAGACAAAATGATGCAATTTCCCGAGCATGGAATGTTTG-AAAA
66 TT-ACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAA
* * * * * *
21102513 TTGCTCGAAGGAATGGACCATCTTGAATACTTTATGGAACGAAA-TTATAAAAGAAGTCGTAAAA
129 TTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAA
* * *
21102577 GTTTAACAAGTTCGAATGTTCGT
194 GTTT--GAA----GAA-ATT--A
* * * * * * * ** *
21102600 CAAAGAA-CAAGAGTGAAACAATTCTCACGT-AATAAG--GTTTTAATCCAAAGACCAAAGTTTT
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * * * * *
21102661 TTTAAACAAAATGACAGACTATTTATACC-AATGATGCCATTTCTCGAGCATGTAATGTTCAAAA
65 TTT--ACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAA
* * * * * * * *
21102725 AAGTGCTCGAAGGAATGGATCATCTTGAATAATGTAAGGAGCCGAAGTTATAAAATAACTCGTAA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGT-A
* *
21102790 AAAGTTTG-ACAAGTT-
191 AAAGTTTGAAGAAATTA
** * * * * *
21102805 CGTAAGTTCGTCCAAGAACAAAGAAACAATTCTCACGTAAATAAG-T-TTTTGATTCAAAGACCA
1 C--AAG---AACC---AACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAA
* * * * * * * * * * *
21102868 AAAC-TGTTT-CCAAATGA-GAACTATTTCGACTAAATGTTACTA-TCCTCCGAGAATGGAATGT
58 AAACTTGTTTACAAAATAACAAACTATTT-AACCAAATGATGCGATTTC-CCAAGCATGGAATGT
* * * * * * * *
21102929 TC-AGAAAATTGATCGAAGGAATGCATCATCTTGAATGCTTT-AGGAGCCGAAGTTATGAAAGAA
121 TCGA-AAAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAA
*
21102992 CTCGTAAAAGTTTGACCAGTTCGAAAGTTCTTC
185 CTCGTAAAAGTTTGA--A----GAAA----TTA
* * *
21103025 CAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAGTT-TTTTAATTCAAGCA-ACAAAACTTT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACA-AAAACTTG
* * * * *
21103086 TTTAGAAAATGACAAACTATTTAGACCAAATGATGCGA-TTCCC-A-CATGGAATATTTGGAAAA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAA
* * * ** *
21103148 TTGCTCGAAGGAATGGATCGTCTTGAATACATTATGGAACTGAA-TTAT-AAAGAACTCGCAAAA
129 TTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAA
* *
21103211 GTTTAACAAGTTGAAAGTTCGTC
194 GTTT--GAA---GAAA--T--TA
* * * * * * *
21103234 CAAGAACCAAAAGACAAAAAAATTCTCTCACGTAAATAAG-T-ATGTAATTCAAAGACCAAAACT
1 CAAGAACCAACAGA-GAAATAA-T-TCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACT
* * * * * * * *
21103297 TTTTTACAAAATGACAAACAATTTAGA-AAAATGATGCGATTTTCCGAGCATAGAATGTT-TAGA
63 TGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-A
* * * *
21103360 AAGTTGCTCGAAGGAATGTATCGTCTTGAATA-TTGTAAGG-A--GAAGTTATAAAAGAACTCGT
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTT-TAAGGAACCAAAGTTATAAAAGAACTCGT
* *
21103421 AAAATTTTGACTAGTTCAGAAGTTTTT
190 AAAAGTTTGA--AG---A-AA---TTA
* * * * *
21103448 CTAAGAACCAAGAGAGAAACAA-TCTCATGTAAAAAAATTCTTTTAATTC-AACACAAAAACTTG
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * * * **
21103511 TTTACAAAATGACAAACTAATTATGCCAAATGATGTGATTTTTCCCGATTATGGAATGTTCG-AA
65 TTTACAAAATAACAAACTATTTA-ACCAAATGATGCGA--TTTCCCAAGCATGGAATGTTCGAAA
* * ** *
21103575 AATAGCTTGAAGGAGT-GA-CTGTCTTGAATACTTTAAGGAACTGAAG-TGTAAAAGAACTCGTA
127 AATTGCTCGAAGGAGTGGATC-GTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTA
* *
21103637 AAAGTTTGATTAGTTCGGAAGTTCGT
191 AAAGTTTGA--A-----GAAATT--A
** ** * * * * * * * *
21103663 CAAAGAACC-AGGGAG-AGCAATCCTCAAGTAAAT-AGGT-GTTTAATTCAAAGACCAAAAGTTA
1 C-AAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTG
* * * *
21103724 TTTAC-AAATGACAAACTATTTAGAGGCAAATGATGCGATTTCCCGAGCATGGAATGTTTGAAAA
65 TTTACAAAATAACAAACTATTTA-A-CCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * * * *
21103788 ATTGCTCGAAAGAATGAATCGTCTTGAATACTGTAAGGAACC-GAGTTATAAAAGAACTCGT-AA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
*
21103851 AGTTTGAA-AAGTT-
193 AGTTTGAAGAAATTA
* * * * * *
21103864 CGGAAGTTCATGCAATAGTCAAGAGAAACAATTCTCACGTAAATAAGTT-TTTCT-TTTTAAAGA
1 C--AAG---A-ACCA-A--C-AGAGAAATAATTCTCACGTAAATAAGTTCTTT-TAATTCAAACA
* * * * * *
21103927 CCAAAACTTGTTTACAAAATGA-AAACTATTTTGACTAAATGATGCTATTTCCC-AGAATGGAAT
55 CAAAAACTTGTTTACAAAATAACAAACTA-TTTAACCAAATGATGCGATTTCCCAAGCATGGAAT
** * * * *
21103990 GTTTTACAAATTGCTC-AATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAA
119 GTTCGAAAAATTGCTCGAA-GGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAG
* * *
21104054 AACTTGTAAAAGTTTGACAAGTTTGGAAGTCTGTC
183 AACTCGTAAAAGTTTG--AA-----GAA--AT-TA
* * * * * *
21104089 CAAGAACCGAGAGAGAAACAATTCTCACGTAAATAAG-T-ATTTAATTCAAAGACCAAAACTTGT
1 CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
* * ** * * * * *
21104152 TTACAAAA-AGGACAAACAATTTAGA--AAATGAAGCGATTTTTCGAGCGTAGAATGTT-TAGAA
66 TTACAAAATA--ACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAA
* * * * **
21104213 ATTGCTCGAAGGAATGTATCGTCTTGAATAATGTAAGGAACTGAAGTTATAAAAGAACTCGTAAA
128 ATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAA
* *
21104278 TGTTTGACAAGTTCGGAAGTTCA
193 AGTTTG--AA-----GAAATT-A
* * *
21104301 TCCAAGAACC-A-AGAG-AATAATTCTCACGT-AATAA--T-TTTTGATTCAAAGACCAAAACTT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTT
* * * ** * * *
21104359 GATTCCAAAATGACAAACTATTTAGACCAAATCCTGCTATTT-CCAGAGAATAGAATGTTC-AGA
64 GTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCA-AGCATGGAATGTTCGA-A
* * * *
21104422 AAATTGCTCGAA-GAATGGATCGTCTTGAATACTTTAAGGAATCGAAGTTATGAAAGAACTCGTA
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTA
*
21104486 AAAGTTTGACCAGTTCGAAGTTCA
191 AAAGTTTGA--A----GAAATT-A
* * *
21104510 TCCAAGAACCAAGAGAGAAACAA-TCTCACGTAAATAAGTT-TTTTAATTCAAACA-ACAAACAT
1 --CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAAC-T
* * * *
21104572 T-TTTACATAATGAC-AACTATTTAGACCAAATGATGCGATTTCTCGAGCATGG-ATGTTC-AGA
63 TGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGA-A
* * * * *
21104633 AAATTGCTCGAAGGAATGGATCGCCTAGAATACTTTATGGAACCGAA-TTATAAAAGAACTCGTA
126 AAATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTA
*
21104697 AAAGTTTGACAAGTTCGAATTTCA
191 AAAGTTTG--AA----GAAATT-A
* * * * *
21104721 TCCAAGAACCAA-AGAGAGAACAATTCTCACGTAAATAAG-T-ATTTAATTCAAAAACTAAAATT
1 --CAAGAACCAACAGAGA-AATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACT
* * *
21104783 TGTTTACAAAATGACAAAC-ATATAGACCAAATGATGCGATTTCCCAAGCATGGAATGTTCAAAA
63 TGTTTACAAAATAACAAACTATTTA-ACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAA
* * * *
21104847 AATTGCTCGAAGGA-TGGATCGTCTTGAATACTCTAAGAAACCGAAGTTAT-AAAGAACTCATAA
127 AATTGCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA
21104910 AAGTTT
192 AAGTTT
21104916 AACAAGTTTG
Statistics
Matches: 13347, Mismatches: 2713, Indels: 2836
0.71 0.14 0.15
Matches are distributed among these distances:
185 17 0.00
186 13 0.00
187 10 0.00
188 17 0.00
189 6 0.00
190 11 0.00
191 8 0.00
192 25 0.00
193 15 0.00
194 15 0.00
195 25 0.00
196 13 0.00
197 23 0.00
198 41 0.00
199 21 0.00
200 30 0.00
201 52 0.00
202 163 0.01
203 180 0.01
204 227 0.02
205 124 0.01
206 132 0.01
207 327 0.02
208 414 0.03
209 504 0.04
210 707 0.05
211 877 0.07
212 1090 0.08
213 1449 0.11
214 2389 0.18
215 1415 0.11
216 1271 0.10
217 265 0.02
218 351 0.03
219 206 0.02
220 222 0.02
221 143 0.01
222 36 0.00
223 21 0.00
224 11 0.00
225 26 0.00
226 18 0.00
227 8 0.00
228 10 0.00
229 9 0.00
230 12 0.00
231 11 0.00
232 6 0.00
233 5 0.00
234 2 0.00
235 2 0.00
236 26 0.00
237 50 0.00
238 39 0.00
239 7 0.00
240 23 0.00
241 10 0.00
242 9 0.00
243 9 0.00
244 10 0.00
245 12 0.00
246 7 0.00
247 7 0.00
248 7 0.00
249 11 0.00
250 28 0.00
251 26 0.00
252 39 0.00
253 27 0.00
254 18 0.00
255 7 0.00
ACGTcount: A:0.40, C:0.15, G:0.17, T:0.28
Consensus pattern (207 bp):
CAAGAACCAACAGAGAAATAATTCTCACGTAAATAAGTTCTTTTAATTCAAACACAAAAACTTGT
TTACAAAATAACAAACTATTTAACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATT
GCTCGAAGGAGTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGT
TTGAAGAAATTA
Found at i:21089214 original size:185 final size:183
Alignment explanation
Indices: 21088887--21089243 Score: 473
Period size: 185 Copynumber: 1.9 Consensus size: 183
21088877 AGAATTCTTA
* ** *
21088887 AAAGTTTGACAAGTTCAGAAGTTCGTCCAAGAACCAAGAGAAGCAATTCTCACGTAAAAAAGTTT
1 AAAGTTTGACAAGTTCAGAAATTCGTCCAAGAACCAAGAGAAAAAATTCTCACGTAAAAAAGTGT
* *
21088952 TTGATTCAAAGACCAAAACTAGTTTACAAAATGACAAACTAAATAGACAAAATGATGAGACTTCC
66 TTAATTCAAAGACCAAAACTAGTTTACAAAAGGACAAACTAAATAGACAAAATGATGAGACTTCC
*
21089017 CAATAATGGAATGTTCAGAAAATTGCTCAAAGGAATGGATCGAAAGAGCTCGT
131 CAAGAATGGAATGTTCAGAAAATTGCTCAAAGGAATGGATCGAAAGAGCTCGT
* * *
21089070 AAAGTTTTACAAGTTCGGAAATTCGTCCAATAACCAAGAGAGAAAAAATTCTCACGTAAAGAAA-
1 AAAGTTTGACAAGTTCAGAAATTCGTCCAAGAACC-A-AGAGAAAAAATTCTCACGTAAA-AAAG
* ** ** * * * *
21089134 TGTTTAATTCAAAGACCAAAAGTTTTTTACAAAAGGACAAACTATTTAGACCAATTGATGCGATT
63 TGTTTAATTCAAAGACCAAAACTAGTTTACAAAAGGACAAACTAAATAGACAAAATGATGAGACT
* ** *
21089199 TCCCGAGCGTGGAATGTTCAGAAAATTGCTCCAAGGAATGGATCG
128 TCCCAAGAATGGAATGTTCAGAAAATTGCTCAAAGGAATGGATCG
21089244 TCTTGAATAC
Statistics
Matches: 148, Mismatches: 23, Indels: 4
0.85 0.13 0.02
Matches are distributed among these distances:
183 31 0.21
184 1 0.01
185 113 0.76
186 3 0.02
ACGTcount: A:0.41, C:0.16, G:0.18, T:0.24
Consensus pattern (183 bp):
AAAGTTTGACAAGTTCAGAAATTCGTCCAAGAACCAAGAGAAAAAATTCTCACGTAAAAAAGTGT
TTAATTCAAAGACCAAAACTAGTTTACAAAAGGACAAACTAAATAGACAAAATGATGAGACTTCC
CAAGAATGGAATGTTCAGAAAATTGCTCAAAGGAATGGATCGAAAGAGCTCGT
Found at i:21089747 original size:214 final size:216
Alignment explanation
Indices: 21089059--21096300 Score: 6885
Period size: 214 Copynumber: 33.7 Consensus size: 216
21089049 GAATGGATCG
* * * *
21089059 AAAGAGCTCGT-AAAGTTTTACAAGTTCGGAAA-TTCGTCCAATAACCAAGAGAGAAAAAATTCT
1 AAAGAACTCGTAAAAGTTTGACAAGTTC-GAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCT
* * * * * *
21089122 CACGTAAAGAAATGTTTAATTCAAAGACCAAAAGTTTTTTACAAAAGGACAAACTATTTAGACCA
65 CACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCA
* * * *
21089187 ATTGATGCGATTTCCCGAGCGTGGAATGTTCAGAAAATTGCTCCAAGGAATGGATCGTCTTGAAT
130 AATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAAT
*
21089252 ACTGTAAGGAACCGAAGTTATA
195 ACTTTAAGGAACCGAAGTTATA
* * * * * **
21089274 AATGAACACATAAAAGTTTGACAAGTTTGGAAGTTTATCCAAGAACCAAGAGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * * *
21089339 ACGTAAAAAAGTTTTTAATTTAAAGGCAAAAACTT-TTTACAAAATGACAAACAATTTAGA-AAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* ** * * * * *
21089402 ATAATGCGATTTTTCGAGCATAGAATGTTTAGAAAGTTGCTCGAAGGAATGTATCATCTTGAA-G
131 ATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAATA
** * * *
21089466 CTGCAGGGAATCGGAGTTATA
196 CTTTAAGGAACCGAAGTTATA
* * * *
21089487 AAAGAACTCATAAAAGTTTGAAAAGTTCGGAAGTTTGTCCAAGAACC-A-AGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * *
21089550 ACGTAAATAAGTTTTTGATTCAAATACCAAAACTTGTTTCCAAAATGACAAACTATTTAGACCAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* * * * * *
21089615 ATGCTGCTATTTCCCGAGAATGAAATGTTCAAAAAATTGCTCAAAGGAATGGATCATCTTGAATA
131 ATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAATA
* *
21089680 CTTTAAGAAACCGAAGTTATG
196 CTTTAAGGAACCGAAGTTATA
* *
21089701 AAAGAACTGGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAATAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* *
21089766 ACGTAAATAAGTTTTTAATTCAAACAACAAAACCTT-TTTACAAAATGACAAACTATTTAGACCA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACCA
* * *
21089830 AATGATGCGATTTCTCGAGCATGGAA--TTC-GAAAAATAGCTCGAAGGAATGGATTGA-CTTGA
130 AATGATGCGATTTCCCGAGCATGGAATGTTCAG-AAAATTGCTCGAAGGAATGGA-TCATCTTGA
* *
21089891 ATACTTTATGGAACCGAAATTATA
193 ATACTTTAAGGAACCGAAGTTATA
* * * * * *
21089915 AAAGAACTTGTAAAAGTTTGAGAAGATCGAAAGTTCATCCAAGAACTAAAAGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * *
21089980 ACGTAAATAAGTGTTTAATTCAAAGACCAAAAGTTGTGTACAAAATAACAAACTATTTAGACCAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
*
21090045 ATGATGCGATTTCCCGAGCATGGAATGTTC-GAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
131 ATGATGCGATTTCCCGAGCATGGAATGTTCAG-AAAATTGCTCGAAGGAATGGATCATCTTGAAT
* *
21090109 ACTTTAAGAAACCAAAGTTATA
195 ACTTTAAGGAACCGAAGTTATA
* * *
21090131 AAAGAACTCATAAAAGTTTGAAAAGTTC-AATAGTTCGTCAAAGAACCAAGAGAGAAACAATTCT
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAA-AGTTCGTCCAAGAACCAAGAGAGAAACAATTCT
* * * *
21090195 CACGT-AATAAGTTTTTAATCCAAAGACCAAAAGTTTTTTTTTTTACAAAATGACACACTATTTA
65 CACGTAAATAAGTTTTTAATTCAAAGACCAAAA-----CTTGTTTACAAAATGACAAACTATTTA
* * * * **
21090259 TACCAAATGATGTC-ATTTCCTGAGCATGTAATGTTTAGAAAATTGCTCGAAGGAATGGATTGTC
125 GACCAAATGATG-CGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATC
* * *
21090323 TTGAATAATGTAAGGAACCAAAGTTATA
189 TTGAATACTTTAAGGAACCGAAGTTATA
* * * * *
21090351 AAAGAAATCGGAAAAGTTTAACAAGTTCGGAAGTTCGTCCAAGCACC-A-AGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * ** *
21090414 ATGTAAATAAATTTTTGATTCAAAGGGCAAAACTTGTTTCCAAAATGA-AGAACTATTTAGACCA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACCA
* * * * *
21090478 AATGCTGCTATCTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAGGCATGGATCATCTTGAAT
130 AATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAAT
*
21090543 GCTTTAAGGAACCGAAGTTATA
195 ACTTTAAGGAACCGAAGTTATA
* * *
21090565 AAAGAACTTGTAAAAGTTTGACAAGTTCGAAAGTTCTTCCAAGAACCAAGAGAGAAACAATTCTT
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * * * * *
21090630 ACGTAAATAAGTTTTTAATTCCCAAGAGA-GAAACAATT-CTTAC---GTAACTAAGTTTTTA-A
66 ACGTAAATAAGTTTTTAATT--CAA-AGACCAAA-ACTTGTTTACAAAATGACAAACTATTTAGA
* ** * ** ** ** ** * *
21090689 TTCAATCAACAAGACTTTTTTAC-AAAATAACAAACTATTTAGACCAAATGATGCGATTTCCG-A
127 -CCAA--ATGATG-CGATTTCCCGAGCAT--GGAA-TGTTCAGA--AAAT--TGC----T-CGAA
* * * * * *
21090752 -GCATGGA--ATGTTTTAAAAATTGATCGAAGGAATGGATCGTCTTGAATACATTATGGAA
176 GGAATGGATCAT-CTTGAATACTT--T--AAGG-A---A-C--C--G-A-A-GTTAT---A
* * *
21090810 CTGAATTATAAAAGAACTCGTAAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAATAG
1 ----------AAAGAACTCGT-AAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAG
* * * * * *
21090875 AAACAACTCTCACGTAAATAAGTATGTAATTCGAAGACCAAAACTTTTTTACAAAATGACAAACA
55 AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACT
* * * ** * * * * * *
21090940 ATTTAGA-AAAATGATACGATTTTCTAAGCATAGAATATTTAGAAAGTTGCTCCAAGGAATGTAT
120 ATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGAT
* *
21091004 CGTCTTGAATA-TTGTAAGGAACCGAATTTATA
185 CATCTTGAATACTT-TAAGGAACCGAAGTTATA
* * * * *
21091036 AAAGAACTCGTAAAATTTTGATAAGTTCAAAAGTTTGTCTAAGAACCAAGAGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * * * *
21091101 ATGTAAAAAAGTTCTTTTAATTCAAACACAAAAACTTGTTCACAAAATGATAAACTATTTATACC
66 ACGTAAATAAG-T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACC
* * *** * * **
21091166 AAATAATGCGATTTCCCGAACATGGAATGTTC-GAAAAATAATTTGAAGGAGTGGATTGTCTTGA
129 AAATGATGCGATTTCCCGAGCATGGAATGTTCAG-AAAATTGCTCGAAGGAATGGATCATCTTGA
*
21091230 ATACTTTAAGGAACCGAAGTTGTA
193 ATACTTTAAGGAACCGAAGTTATA
** * * * *
21091254 AAAGAACTCGTAAAAGTTTGATTAGTTCGAAAGTTCATCAAAGAACCAAGGGAG-AACAATCCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * * **
21091318 ACGTAAATAAGTATTTAATTCAAAGACTAAAAGTTGTTTACAAATTGACAAACTATTCAGAGTAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* * * *
21091383 ATGATGCAATTTCTCGAGCATGGAATGTTC-GAAAAATTGCTCGAAGGAATGGATCGTCTTTAAT
131 ATGATGCGATTTCCCGAGCATGGAATGTTCAG-AAAATTGCTCGAAGGAATGGATCATCTTGAAT
*
21091447 ACTATAAGGAACC-AAGTTATA
195 ACTTTAAGGAACCGAAGTTATA
* * * * * * *
21091468 AAATAACTCATAAATGTTTGAAAAGTTCGGAAGTTCATCCAAGAGCC-A-AGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * *
21091531 ACGTAAATAAGTTTTCATTTTTAAAGACCAAAACTTGTTTACAAAATGAAAAAACTATTTAGACT
66 ACGTAAATAAGTTTTTA-ATTCAAAGACCAAAACTTGTTTACAAAATG-ACAAACTATTTAGACC
* * * *
21091596 AAATGATGCGATTTCCCGAGAATAGAATGTTCA-AAAATTGCTC-AATGGAATGGATCGTTTTGA
129 AAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAA-GGAATGGATCATCTTGA
21091659 ATACTTTAAGGAACCGAAGTTATA
193 ATACTTTAAGGAACCGAAGTTATA
* * * * *
21091683 AAAGAACTCGTAAAAGTTTGACAAGTTTGGAAGTTCATCCAAGAACCGAGAGAGAAACAACTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * **
21091748 ACGTAAATAAGTATTTAATTCAAAGACC-AAACTTGTTTACAAAAGGACAAA-TAATTTA-AAAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACT-ATTTAGACCA
* ** * * * * *
21091810 AATGATGTGATTTTTCGAGCATAGAATGTTTAGAAAGTTGCTCGAAGGAATGTACCATCTTGAAT
130 AATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAAT
* *
21091875 AATGTAAGGAACCGAAGTTATA
195 ACTTTAAGGAACCGAAGTTATA
* * * * *
21091897 AAAGAACTCGTAAATGCTTGACAAGTTCGGAAGTTCATCCAAGAACC-A-CGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * *
21091960 ACGT--A-AA-TTTTTGATTTAAAGACCAAAACTTGTTTCCAAAATGACAAACTTTTTAGACCAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* ** * * * * *
21092021 ATGCTGTTA-TTCCCGAGAACGGAATGTTCAAAAAATTGATCAAAGGAATGGATCATCTTGAATA
131 ATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAATA
* *
21092085 -TTTAAGGAATCGAAGTTATG
196 CTTTAAGGAACCGAAGTTATA
* * * * *
21092105 AAAGAACTCATAAAAGTTTGACCAGTTCGAAAGTTCATCCAAGAACCAAGAGACAAAACAACTCT
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGA-GAAACAATTCT
* ** * * *
21092170 CACGTAAATAAG-TTTTAATTCAAACAATAAAACTTTTTTATAAAATGACAAACTTTTTAGACCA
65 CACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCA
* * * * * * *
21092234 AATAATGCCATTTCCC-ATGCATGAAATATTCAGAAAACTGCTCAAAGGAATGGATCGTCTTGAA
130 AATGATGCGATTTCCCGA-GCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAA
* *
21092298 TACTTTATGGAACTGATA-TTATA
194 TACTTTAAGGAACCGA-AGTTATA
* * * * *
21092321 AAA-AAGCTCGTAAAAGTTTGACAGGTTTGGAAGTTCATCCAAGAACCAAAAGAGAAACAATTCT
1 AAAGAA-CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCT
* * * * * * * **
21092385 CACATAAATGAGTATTTAATTCAAATACAAAAACTTGTTTACAAAAGGACAAACAATTTAGAAAA
65 CACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCA
*** * * ** * *
21092450 AATGATGCGATTTTTTGAGCATAGAATGTTTAGAATGTTGCTCGAAGGAATGTATCGTCTTGAAT
130 AATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAAT
** **
21092515 ACGGTAAGGAATAGAAGTTATA
195 ACTTTAAGGAACCGAAGTTATA
* * * *
21092537 AAAGAACACGTAAATGTTTGACAGGTTC-AGAAGTTCATCCAAGAACC-A-AGAGAAACAATTCT
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCT
* *
21092599 CACGTAAATAAGTTTTTTATTCAAAGACCAAAATTTGTTT-CAAAATGACAAACT-TCTT-GAAC
65 CACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTAT-TTAG-AC
* * * * * *
21092661 CAAATGCTGCTATTTCCCGAGAATGGAATGTTTAGAAAATTGCTCGAAGGAATGGATCGTCTTCA
128 CAAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGA
** *
21092726 ATACTTTAAGGAATTGAAGTTATG
193 ATACTTTAAGGAACCGAAGTTATA
* * * * ** *
21092750 AAAGAACTCATAAAATTTTGACCAGTTCAAAAGTTCGTGTAAGAATCAAGAGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * * * **
21092815 ACGTAAATAAGTTTTTAATTCAAACAACAAAACTTTTTTACAAAATGACACATTATTTATATAAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* * * * *
21092880 ATGATGTC-ATTTCCTGATCATGTAATGTTTAGAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
131 ATGATG-CGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAAT
* * *
21092944 AATGTAAGGAACCAAAGTTATA
195 ACTTTAAGGAACCGAAGTTATA
* * * *
21092966 AAACAACTCGTAAAAGTTTGACCAGTTCGGAAGTTCGTCCAAGAA-CAA-AGAGAAGCAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* *
21093029 ACGTAAATAA-ATTTTGATTCAAAGACCAAAACTTGTTT-CTAAAATGA-AGAACTATTTAGACC
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTAC-AAAATGACA-AACTATTTAGACC
* * * * * *
21093091 AAATGCTACTATCTCCCGAGAATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCGTCTTGAA
129 AAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAA
** * *
21093156 TACTTT-AGGAGTCGAAGGTATC
194 TACTTTAAGGAACCGAAGTTATA
* *
21093178 AAAGAACTCGTAAAAGTTTGACCAGTTC-AAAATTCGT-------CC-A-AGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * *
21093233 ACGTAAA-AAGTGTTTAATTCAAAGACCAAAAGTTATTCACAAAATAACAAACTATTTAGACCAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* * *
21093297 ATGATGCGATTTCCCGAGCATGGAATGTT-TGAAAAATTGCTCTAAGGAATGGATCGTCTTGAAT
131 ATGATGCGATTTCCCGAGCATGGAATGTTCAG-AAAATTGCTCGAAGGAATGGATCATCTTGAAT
* * *
21093361 ACTCTAAGAAACTGAAGTTATA
195 ACTTTAAGGAACCGAAGTTATA
* * * * * *
21093383 AAAGAACTCATAAAAGTTTGAAAAGTTCGGAAGTTCGTCAAAGAACCAAAAGAGAAACAATTTTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * ** * * * * *
21093448 ACGT-AATAAGTGTTTAATCCAAAGATCAAAGTTTTTTTACAGAATGACACACTATTTATACAAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* * **
21093512 ATGATGTC-ATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGATGGAATGGATTGTCTTGAAT
131 ATGATG-CGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAAT
* * *
21093576 AATGTAAGGAACTGAAGTTATAA
195 ACTTTAAGGAACCGAAGTTAT-A
* * * * *
21093599 AAAAAACTCAT-AAAGTTTGACAAGTTCGGAAGTTCGTTCAACAACC-A-AGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * *
21093661 ACGTAAATAAATTTTTGATTCACAGACCAAAACTTGTTTCCAAAATGA-AGAACTATTTAGACCA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACCA
* * * * * * *
21093725 AATGATGCTATCTT-CCGAGAATGAAATGTTCATAAAA-TGCT-GGAGAAATGGATCGTCTTGAA
130 AATGATGCGAT-TTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAA
* * *
21093787 TGCTTTAAGGAGCCGAAGTTATG
194 TACTTTAAGGAACCGAAGTTATA
* **
21093810 AAAGAACTCGTAAAAGTTTGATC-AGTTCAAAAGTTTATCCAAGAACCAAGAGAGAAAC-ATTCT
1 AAAGAACTCGTAAAAGTTTGA-CAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCT
* * *
21093873 CAC----A-AAGTTTTTAATTCAAAAAACAAAACTTTTTTACAAAATGACAAACTATTTAGACCA
65 CACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACC-
* * * * *
21093933 AAATGATGTGATTTCCCAAGCATGAAATGTTC-GAAAATTGCTCGAAGGAATGGATCGTCTTGAG
129 AAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAA
* *
21093997 TACTCT-AGAAACCGAAGTTATA
194 TACTTTAAGGAACCGAAGTTATA
* * *
21094019 AAAGAACTCGTAAAAGTTTG---AG---G-AACTTCGTCAAAGAACCAATAGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * * *
21094077 ACGT-AATAAGTGTTTAATCCAAAGACCAAAAGTTTTTTACAAAATGACATACTATTTATACCAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* * * * * *
21094141 ATGATGCCATTTCCCGAGCATGTAATATTTAGAAAAATTGCTCGAAGGAATGGATCGTCTTGAGT
131 ATGATGCGATTTCCCGAGCATGGAATGTTCAG-AAAATTGCTCGAAGGAATGGATCATCTTGAAT
* *
21094206 ACTCTAAGAAACCGAAGTTATAA
195 ACTTTAAGGAACCGAAGTTAT-A
* * * * * **
21094229 AAAGAACTCGTAAAAGTTTGAAAAGTTTGGAACTTCGTCAAAGAAAGAACCAATTGAGAAACAAT
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTC----CAAGAACCAAGAGAGAAACAAT
* * * *
21094294 TCTCACGTAAATAA-ATTTTGATTCAAAGACAAAAACTTTGTTGTTTCCAAAATG---AA-TATT
62 TCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAC----TTGTTTACAAAATGACAAACTATT
* * * * * *
21094354 TAGACCAAATGATGCTATCTCCGGAGAATGGAATGTTCAGAAAATTGCTCGACGGAATGGATCGT
123 TAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCAT
* * *
21094419 CTTGAATACTTGAAGGAACAGAAGTTATG
188 CTTGAATACTTTAAGGAACCGAAGTTATA
* *
21094448 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCTTCCAAGAATCAAGAGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* ** * * *
21094513 ACGTAAATAAGTTTTTAATTCAAACAAAACAAATTTTTTTCACAAAATGACAAACTATTTAGACA
66 ACGTAAATAAGTTTTTAATTCAAAGACCA-AAACTTGTTT-ACAAAATGACAAACTATTTAGACC
* ** *
21094578 AAATGATGCAATTTCCCGAGCATGGAATGTTTGGAAAATTGCTCGAAGGAATGGACCATCTTGAA
129 AAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAA
* * *
21094643 TACTTTATGGAACTGAAATTATA
194 TACTTTAAGGAACCGAAGTTATA
* * * * * *
21094666 AAAGAAGTCGTAAAAGTTTAACAAGTTCGAATGTTCGTCAAAGAACTAAGAGTGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * * *
21094731 ACGT-AATAAGTGTTTAATCCAAAGACCAAAAGTTTTTTACAAAATGACAGACTATTTATACCAA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
* * * * *
21094795 ATGATGCCATTTCTCGAGCATGTAATGTTCAAAAAAGTGCTCGAAGGAATGGATCATCTTGAATA
131 ATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAATA
* * *
21094860 ATGTAAGGAGCCGAAGTTATA
196 CTTTAAGGAACCGAAGTTATA
*
21094881 AAATAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAG-G-AACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * *
21094944 ACGTAAATAAGTTTTTGATTCAAAGACCAAAACTTGTTTCCAAAGTGA-AGAACTATTTCGACTA
66 ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACCA
* * * * * * *
21095008 AATGTTACTATCTCCCGAGAAT-GAATGTTCAGAAAATTGATCGAAGGAATGCATCATC-TGAAT
130 AATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAAT
* * *
21095071 GCTTTAAGGAGCCGAAGTTATG
195 ACTTTAAGGAACCGAAGTTATA
* *
21095093 AAAGAACTCGTAAAAGTTTGACCAGTTCGAAAGTTCTTCCAAGAACCAAGAGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * *
21095158 ACGTAAATAAGTTTTTAATTC-AAGCAACAAAACTTTTTTAGAAAAAATGACAAACTATTTAGAC
66 ACGTAAATAAGTTTTTAATTCAAAG-ACCAAAACTTGTTT--ACAAAATGACAAACTATTTAGAC
* ** *
21095222 CAAATGATGCGA--TCCC-AGCATGGAATATTTGGAAAATTGCTCGAAGGAATGGATCGTCTTGA
128 CAAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGA
* * *
21095284 ATACATTATGGAACTGAA-TTATA
193 ATACTTTAAGGAACCGAAGTTATA
* * * * * *
21095307 AAAGAACTCGCAAAAGTTTAACAAGTTTGAAAGTTCGTCCAAGAACCAAAAGACAAAAAAAATTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC--AAGAGAGAAACAATTC
* * * * *
21095372 TCACGTAAATAAGTATGTAATTCAAAGACC-AAACTTTTTTACAAAATGACAAACAATTTAGA-A
64 TCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACC
* * * * * *
21095435 AAATGATGCGATTTTCCGAGCATAGAATGTTTAGAAAGTTGCTCGAAGGAATGTATCGTCTTGAA
129 AAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAA
21095500 TA-TTGTAAGG-A--GAAGTTATA
194 TACTT-TAAGGAACCGAAGTTATA
* ** *
21095520 AAAGAACTCGTAAAA-TTTGACTAGTTC-AGAAGTTTTTCTAAGAACCAAGAGAGAAACAATTCT
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCT
* * * * * *
21095583 CATGTAAAAAAATTCTTTTAATTCAAACACAAAAACTTGTTTACAAAATGACAAACTAATTATG-
65 CACGT-AAATAAGT-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTA-GA
* ** * * * * *
21095647 CCAAATGATGTGATTTCCCGATTATGGAATGTTCGGAAAATAGCTTGAAGG-AGGGA-CTGTCTT
127 CCAAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATC-ATCTT
* *
21095710 GAATACTTTAAGGAACTGAAGTTGTA
191 GAATACTTTAAGGAACCGAAGTTATA
** * * * * *
21095736 AAAGAACTCGTAAAAGTTTGATTAGTTCGGAAG-TCGTCCAAAGAAACAA-AGGGAGAGCAATCC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCC-AAGAACCAAGAGAGA-AACAATTC
* * * * * *
21095799 TCAAGTAAATAGGTGTTTAATTCAAAGACCAAAA-GTATTTACAAAATGACAAACTATTTAGAGC
64 TCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACC
* * * *
21095863 AAATGATGCGATTTCCCGAGCATGGAATGTTGA-AAAATTGCTCGAAAGAATGAATCGTCTTGAA
129 AAATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAA
* *
21095927 TACTGTAAGAAACCG-AGTTATA
194 TACTTTAAGGAACCGAAGTTATA
* * * * * **
21095949 AAAGAACTCGTAAAAG-TTGAAAAGTTCGGAAGTTCATGCAATAGTC-A-AGAGAAACAATTCTC
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* * * * *
21096011 ACGTAAATAAGTTTTCT-TTTTAAAGACCAAAACTTGTTTACAAAATGAAAAACTATTTTGACTA
66 ACGTAAATAAGTTTT-TAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCA
* * * * * *
21096075 AATGATGCTATTTCCCAAGAATGGAATGTTTA-CAAATTGCTC-AATGGAATGGATCGTCTTGAA
130 AATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAA-GGAATGGATCATCTTGAA
21096138 TACTTT-AGGAACCGAAGTTATA
194 TACTTTAAGGAACCGAAGTTATA
* * * * *
21096160 AAAAAACTTGTAAAAGTTTGACAAGTTTGGAAG-TCTGTCCAAGAACCGAGAGAGAAACAATTCT
1 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-GTCCAAGAACCAAGAGAGAAACAATTCT
* * * *
21096224 CACGTAAATAAGTATTTAATTCAAAGACCAAAACTTGTTTACAAAAGGACAAACAATTTAGA-AA
65 CACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCA
*
21096288 AATGAAGCGATTT
130 AATGATGCGATTT
21096301 TTCGAGNNNN
Statistics
Matches: 5781, Mismatches: 996, Indels: 502
0.79 0.14 0.07
Matches are distributed among these distances:
202 23 0.00
203 11 0.00
204 124 0.02
205 38 0.01
206 36 0.01
207 49 0.01
208 162 0.03
209 150 0.03
210 117 0.02
211 193 0.03
212 308 0.05
213 628 0.11
214 1231 0.21
215 903 0.16
216 785 0.14
217 172 0.03
218 286 0.05
219 66 0.01
220 192 0.03
221 84 0.01
222 10 0.00
224 3 0.00
225 14 0.00
226 7 0.00
227 7 0.00
228 3 0.00
229 6 0.00
230 5 0.00
231 2 0.00
232 1 0.00
234 2 0.00
235 1 0.00
236 1 0.00
237 2 0.00
239 1 0.00
240 2 0.00
241 5 0.00
242 5 0.00
243 3 0.00
244 7 0.00
245 6 0.00
246 1 0.00
247 3 0.00
249 3 0.00
251 8 0.00
252 2 0.00
253 11 0.00
254 14 0.00
255 10 0.00
256 68 0.01
257 9 0.00
258 1 0.00
ACGTcount: A:0.41, C:0.15, G:0.17, T:0.28
Consensus pattern (216 bp):
AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA
ATGATGCGATTTCCCGAGCATGGAATGTTCAGAAAATTGCTCGAAGGAATGGATCATCTTGAATA
CTTTAAGGAACCGAAGTTATA
Found at i:21090655 original size:41 final size:41
Alignment explanation
Indices: 21090610--21090691 Score: 155
Period size: 41 Copynumber: 2.0 Consensus size: 41
21090600 CTTCCAAGAA
21090610 CCAAGAGAGAAACAATTCTTACGTAAATAAGTTTTTAATTC
1 CCAAGAGAGAAACAATTCTTACGTAAATAAGTTTTTAATTC
*
21090651 CCAAGAGAGAAACAATTCTTACGTAACTAAGTTTTTAATTC
1 CCAAGAGAGAAACAATTCTTACGTAAATAAGTTTTTAATTC
21090692 AATCAACAAG
Statistics
Matches: 40, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
41 40 1.00
ACGTcount: A:0.40, C:0.16, G:0.12, T:0.32
Consensus pattern (41 bp):
CCAAGAGAGAAACAATTCTTACGTAAATAAGTTTTTAATTC
Found at i:21091094 original size:215 final size:215
Alignment explanation
Indices: 21090651--21096300 Score: 5612
Period size: 215 Copynumber: 26.5 Consensus size: 215
21090641 TTTTTAATTC
* * ** * *
21090651 CCAAGAGAGAAACAATTCTTACGTAACTAAGTTTTTAATTCAATCAACAAGACTTTTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* *
21090716 TAACAAACTATTTAGACCAAATGATGCGATTT-CCGAGCATGGAATGTTTTA-AAAATTGATCGA
66 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATG-TTTAGAAAATTGCTCGA
* * *
21090779 AGGAATGGATCGTCTTGAATACATTATGGAACTGAA-TTATAAAAGAACTCGTAAAAAGTTTGAC
130 AGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGT-AAAAGTTTGAC
21090843 AAGTTCGGAAGTTCGTCCAAGAA
193 AAGTTCGGAAGTTCGTCCAAGAA
* * * * * *
21090866 CCAAAATAGAAACAACTCTCACGTAAATAAGTATGTAATTCGAAGACCAAAACTTTTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * * * ** * * * *
21090931 TGACAAACAATTTAGA-AAAATGATACGATTTTCTAAGCATAGAATATTTAGAAAGTTGCTCCAA
66 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAA
* * * *
21090995 GGAATGTATCGTCTTGAATATTGTAAGGAACCGAATTTATAAAAGAACTCGTAAAATTTTGATAA
131 GGAATGGATCGTCTTGAATATT-TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAA
** * *
21091060 GTTCAAAAGTTTGTCTAAGAA
195 GTTCGGAAGTTCGTCCAAGAA
* * * * * *
21091081 CCAAGAGAGAAACAATTCTCATGTAAAAAAGTTCTTTTAATTCAAACACAAAAACTTGTTCACAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAG-T-TTTTAATTCAAAGACCAAAACTTTTTTACAA
* * * * * *** *
21091146 AATGATAAACTATTTATACCAAATAATGCGATTTCCCGAACATGGAATG-TTCGAAAAATAATTT
64 AATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAG-AAAATTGCTC
* * *
21091210 GAAGGAGTGGATTGTCTTGAATACTTTAAGGAACCGAAGTTGTAAAAGAACTCGTAAAAGTTTGA
128 GAAGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA
** * * *
21091275 TTAGTTCGAAAGTTCATCAAAGAA
192 CAAGTTCGGAAGTTCGTCCAAGAA
* * * * * * *
21091299 CCAAGGGAG-AACAATCCTCACGTAAATAAGTATTTAATTCAAAGACTAAAAGTTGTTTACAAAT
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* ** * * *
21091363 TGACAAACTATTCAGAGTAAATGATGCAATTTCTCGAGCATGGAATG-TTCGAAAAATTGCTCGA
66 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAG-AAAATTGCTCGA
* * * * * *
21091427 AGGAATGGATCGTCTTTAATACTATAAGGAACC-AAGTTATAAAATAACTCATAAATGTTTGAAA
130 AGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACA
* *
21091491 AGTTCGGAAGTTCATCCAAGAG
194 AGTTCGGAAGTTCGTCCAAGAA
* * * *
21091513 CC-A-AGAGAAACAATTCTCACGTAAATAAGTTTTCATTTTTAAAGACCAAAACTTGTTTACAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTA-ATTCAAAGACCAAAACTTTTTTACAAA
* * * * *
21091576 ATGAAAAAACTATTTAGACTAAATGATGCGATTTCCCGAGAATAGAATGTTCA-AAAATTGCTC-
65 ATG-ACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCG
*
21091639 AATGGAATGGATCGTTTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA
129 AA-GGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA
* *
21091704 CAAGTTTGGAAGTTCATCCAAGAA
192 CAAGTTCGGAAGTTCGTCCAAGAA
* * * *
21091728 CCGAGAGAGAAACAACTCTCACGTAAATAAGTATTTAATTCAAAGACC-AAACTTGTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* ** * ** * *
21091792 GGACAAA-TAATTTA-AAAAAATGATGTGATTTTTCGAGCATAGAATGTTTAGAAAGTTGCTCGA
66 TGACAAACT-ATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGA
* * * * * *
21091855 AGGAATGTACCATCTTGAATAATGTAAGGAACCGAAGTTATAAAAGAACTCGTAAATGCTTGACA
130 AGGAATGGATCGTCTTGAAT-ATTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACA
*
21091920 AGTTCGGAAGTTCATCCAAGAA
194 AGTTCGGAAGTTCGTCCAAGAA
* * * * *
21091942 CC-A-CGAGAAACAATTCTCACGT--A-AA-TTTTTGATTTAAAGACCAAAACTTGTTTCCAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * ** * * * * * *
21092001 TGACAAACTTTTTAGACCAAATGCTGTTA-TTCCCGAGAACGGAATGTTCAAAAAATTGATCAAA
66 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAA
* * * * *
21092065 GGAATGGATCATCTTGAATATTTAAGGAATCGAAGTTATGAAAGAACTCATAAAAGTTTGACCAG
131 GGAATGGATCGTCTTGAATATTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG
* *
21092130 TTCGAAAGTTCATCCAAGAA
196 TTCGGAAGTTCGTCCAAGAA
* * * ** *
21092150 CCAAGAGACAAAACAACTCTCACGTAAATAAG-TTTTAATTCAAACAATAAAACTTTTTTATAAA
1 CCAAGAGA-GAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAA
* * * * * * * *
21092214 ATGACAAACTTTTTAGACCAAATAATGCCATTTCCC-ATGCATGAAATATTCAGAAAACTGCTCA
65 ATGACAAACTATTTAGACCAAATGATGCGATTTCCCGA-GCATGGAATGTTTAGAAAATTGCTCG
* *
21092278 AAGGAATGGATCGTCTTGAATACTTTATGGAACTGATA-TTATAAAA-AAGCTCGTAAAAGTTTG
129 AAGGAATGGATCGTCTTGAATA-TTTAAGGAACCGA-AGTTATAAAAGAA-CTCGTAAAAGTTTG
* * *
21092341 ACAGGTTTGGAAGTTCATCCAAGAA
191 ACAAGTTCGGAAGTTCGTCCAAGAA
* * * * * * *
21092366 CCAAAAGAGAAACAATTCTCACATAAATGAGTATTTAATTCAAATACAAAAACTTGTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * ** *** * **
21092431 GGACAAACAATTTAGAAAAAATGATGCGATTTTTTGAGCATAGAATGTTTAGAATGTTGCTCGAA
66 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAA
* ** ** * * *
21092496 GGAATGTATCGTCTTGAATACGGTAAGGAATAGAAGTTATAAAAGAACACGTAAATGTTTGACAG
131 GGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAA
* *
21092561 GTTCAGAAGTTCATCCAAGAA
195 GTTCGGAAGTTCGTCCAAGAA
*
21092582 CC-A-AGAGAAACAATTCTCACGTAAATAAGTTTTTTATTCAAAGACCAAAA-TTTGTTT-CAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTT-TTTACAAA
* * *
21092643 ATGACAAACT-TCTT-GAACCAAATGCTGCTATTTCCCGAGAATGGAATGTTTAGAAAATTGCTC
65 ATGACAAACTAT-TTAG-ACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTC
* ** * * *
21092706 GAAGGAATGGATCGTCTTCAATACTTTAAGGAATTGAAGTTATGAAAGAACTCATAAAATTTTGA
128 GAAGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA
* ** **
21092771 CCAGTTCAAAAGTTCGTGTAAGAA
192 CAAGTTCGGAAGTTCGTCCAAGAA
* * *
21092795 TCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAACAACAAAACTTTTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * * ** * * *
21092860 TGACACATTATTTATATAAAATGATGTC-ATTTCCTGATCATGTAATGTTTAGAAAATTGCTCGA
66 TGACAAACTATTTAGACCAAATGATG-CGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGA
* * * *
21092924 AGGAATGGATCGTCTTGAATAATGTAAGGAACCAAAGTTATAAAACAACTCGTAAAAGTTTGACC
130 AGGAATGGATCGTCTTGAAT-ATTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACA
21092989 AGTTCGGAAGTTCGTCCAAGAA
194 AGTTCGGAAGTTCGTCCAAGAA
* * * *
21093011 -CAA-AGAGAAGCAATTCTCACGTAAATAA-ATTTTGATTCAAAGACCAAAACTTGTTT-CTAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTAC-AAA
* * * * * *
21093072 ATGA-AGAACTATTTAGACCAAATGCTACTATCTCCCGAGAATGGAATGTTCAGAAAATTGCTCG
65 ATGACA-AACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCG
** * *
21093136 AAGGAATGGATCGTCTTGAATACTTT-AGGAGTCGAAGGTATCAAAGAACTCGTAAAAGTTTGAC
129 AAGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAC
* * *
21093200 CAGTTC-AAAATTCGT-------
193 AAGTTCGGAAGTTCGTCCAAGAA
* * * *
21093215 CC-A-AGAGAAACAATTCTCACGTAAA-AAGTGTTTAATTCAAAGACCAAAAGTTATTCACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* *
21093277 TAACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTT-GAAAAATTGCTCTA
66 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAG-AAAATTGCTCGA
* * * * *
21093341 AGGAATGGATCGTCTTGAATACTCTAAGAAACTGAAGTTATAAAAGAACTCATAAAAGTTTGAAA
130 AGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACA
*
21093406 AGTTCGGAAGTTCGTCAAAGAA
194 AGTTCGGAAGTTCGTCCAAGAA
* * * * * ** *
21093428 CCAAAAGAGAAACAATTTTCACGT-AATAAGTGTTTAATCCAAAGATCAAAGTTTTTTTACAGAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * *
21093492 TGACACACTATTTATACAAAATGATGTC-ATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGA
66 TGACAAACTATTTAGACCAAATGATG-CGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGA
* * * * * *
21093556 TGGAATGGATTGTCTTGAATAATGTAAGGAACTGAAGTTATAAAAAAAACTCAT-AAAGTTTGAC
130 AGGAATGGATCGTCTTGAAT-ATTTAAGGAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGAC
* *
21093620 AAGTTCGGAAGTTCGTTCAACAA
193 AAGTTCGGAAGTTCGTCCAAGAA
* * * * *
21093643 CC-A-AGAGAAACAATTCTCACGTAAATAAATTTTTGATTCACAGACCAAAACTTGTTTCCAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * * * *
21093706 TGA-AGAACTATTTAGACCAAATGATGCTATCTT-CCGAGAATGAAATGTTCATAAAA-TGCT-G
66 TGACA-AACTATTTAGACCAAATGATGCGAT-TTCCCGAGCATGGAATGTTTAGAAAATTGCTCG
* * * * *
21093767 GAGAAATGGATCGTCTTGAATGCTTTAAGGAGCCGAAGTTATGAAAGAACTCGTAAAAGTTTGAT
129 AAGGAATGGATCGTCTTGAAT-ATTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA-
** **
21093832 C-AGTTCAAAAGTTTATCCAAGAA
192 CAAGTTCGGAAGTTCGTCCAAGAA
* *
21093855 CCAAGAGAGAAAC-ATTCTCAC----A-AAGTTTTTAATTCAAAAAACAAAACTTTTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * * *
21093914 TGACAAACTATTTAGACCAAAATGATGTGATTTCCCAAGCATGAAATG-TTCGAAAATTGCTCGA
66 TGACAAACTATTTAGACC-AAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGA
* * *
21093978 AGGAATGGATCGTCTTGAGTACTCT-AGAAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---
130 AGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACA
* *
21094039 A----GGAACTTCGTCAAAGAA
194 AGTTCGGAAGTTCGTCCAAGAA
* * * *
21094057 CCAATAGAGAAACAATTCTCACGT-AATAAGTGTTTAATCCAAAGACCAAAAGTTTTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * * * *
21094121 TGACATACTATTTATACCAAATGATGCCATTTCCCGAGCATGTAATATTTAGAAAAATTGCTCGA
66 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAG-AAAATTGCTCGA
* * * *
21094186 AGGAATGGATCGTCTTGAGTACTCTAAGAAACCGAAGTTATAAAAAGAACTCGTAAAAGTTTGAA
130 AGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGAC
* * *
21094251 AAGTTTGGAACTTCGTCAAAGAAAGAA
193 AAGTTCGGAAGTTCGTC----CAAGAA
** * * * *
21094278 CCAATTGAGAAACAATTCTCACGTAAATAA-ATTTTGATTCAAAGACAAAAACTTTGTTGTTTCC
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAC--T-TT-TTTAC
* * * * *
21094342 AAAATG---AA-TATTTAGACCAAATGATGCTATCTCCGGAGAATGGAATGTTCAGAAAATTGCT
62 AAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCT
* * * *
21094403 CGACGGAATGGATCGTCTTGAATACTTGAAGGAACAGAAGTTATGAAAGAACTCGTAAAAGTTTG
127 CGAAGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG
* *
21094468 ACAAGTTCGAAAGTTCTTCCAAGAA
191 ACAAGTTCGGAAGTTCGTCCAAGAA
* * ** *
21094493 TCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAACAAAACAAATTTTTTTCACAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA-AAACTTTTTT-ACAA
* * *
21094558 AATGACAAACTATTTAGACAAAATGATGCAATTTCCCGAGCATGGAATGTTTGGAAAATTGCTCG
64 AATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCG
* * * * * * *
21094623 AAGGAATGGACCATCTTGAATACTTTATGGAACTGAAATTATAAAAGAAGTCGTAAAAGTTTAAC
129 AAGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAC
*
21094688 AAGTTC-GAATGTTCGTCAAAGAA
193 AAGTTCGGAA-GTTCGTCCAAGAA
* * * * *
21094711 CTAAGAGTGAAACAATTCTCACGT-AATAAGTGTTTAATCCAAAGACCAAAAGTTTTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * * * * * * *
21094775 TGACAGACTATTTATACCAAATGATGCCATTTCTCGAGCATGTAATGTTCAAAAAAGTGCTCGAA
66 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAA
* * * *
21094840 GGAATGGATCATCTTGAATAATGTAAGGAGCCGAAGTTATAAAATAACTCGTAAAAGTTTGACAA
131 GGAATGGATCGTCTTGAAT-ATTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAA
*
21094905 GTTCGAAAGTTCGTCCAAGAA
195 GTTCGGAAGTTCGTCCAAGAA
* * * *
21094926 CCAAGAG-G-AACAATTCTCACGTAAATAAGTTTTTGATTCAAAGACCAAAACTTGTTTCCAAAG
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * * * * * * * *
21094989 TGA-AGAACTATTTCGACTAAATGTTACTATCTCCCGAGAAT-GAATGTTCAGAAAATTGATCGA
66 TGACA-AACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGA
* * * * * *
21095052 AGGAATGCATCATC-TGAATGCTTTAAGGAGCCGAAGTTATGAAAGAACTCGTAAAAGTTTGACC
130 AGGAATGGATCGTCTTGAAT-ATTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACA
* *
21095116 AGTTCGAAAGTTCTTCCAAGAA
194 AGTTCGGAAGTTCGTCCAAGAA
* *
21095138 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTC-AAGCAACAAAACTTTTTTAGAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAG-ACCAAAACTTTTTT--ACA
* *
21095202 AAATGACAAACTATTTAGACCAAATGATGCGA--TCCC-AGCATGGAATATTTGGAAAATTGCTC
63 AAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTC
* * * * *
21095264 GAAGGAATGGATCGTCTTGAATACATTATGGAACTGAA-TTATAAAAGAACTCGCAAAAGTTTAA
128 GAAGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA
* *
21095328 CAAGTTTGAAAGTTCGTCCAAGAA
192 CAAGTTCGGAAGTTCGTCCAAGAA
* * * * *
21095352 CCAAAAGACAAAAAAAATTCTCACGTAAATAAGTATGTAATTCAAAGACC-AAACTTTTTTACAA
1 CC--AAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAA
* * * * *
21095416 AATGACAAACAATTTAGA-AAAATGATGCGATTTTCCGAGCATAGAATGTTTAGAAAGTTGCTCG
64 AATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCG
*
21095480 AAGGAATGTATCGTCTTGAATATTGTAAGG-A--GAAGTTATAAAAGAACTCGTAAAA-TTTGAC
129 AAGGAATGGATCGTCTTGAATATT-TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAC
* * ** *
21095541 TAGTTCAGAAGTTTTTCTAAGAA
193 AAGTTCGGAAGTTCGTCCAAGAA
* * * * * *
21095564 CCAAGAGAGAAACAATTCTCATGTAAAAAAATTCTTTTAATTCAAACACAAAAACTTGTTTACAA
1 CCAAGAGAGAAACAATTCTCACGT-AAATAAGT-TTTTAATTCAAAGACCAAAACTTTTTTACAA
* * ** ** * *
21095629 AATGACAAACTAATTATG-CCAAATGATGTGATTTCCCGATTATGGAATGTTCGGAAAATAGCTT
64 AATGACAAACTATTTA-GACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTC
* * *
21095693 GAAGG-AGGGA-CTGTCTTGAATACTTTAAGGAACTGAAGTTGTAAAAGAACTCGTAAAAGTTTG
128 GAAGGAATGGATC-GTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG
**
21095756 ATTAGTTCGGAAG-TCGTCCAAAGAA
191 ACAAGTTCGGAAGTTCGTCC-AAGAA
* * * * * * * * *
21095781 ACAA-AGGGAGAGCAATCCTCAAGTAAATAGGTGTTTAATTCAAAGACCAAAA-GTATTTACAAA
1 CCAAGAGAGA-AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAA
* *
21095844 ATGACAAACTATTTAGAGCAAATGATGCGATTTCCCGAGCATGGAATGTTGA-AAAATTGCTCGA
65 ATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGA
* * * * *
21095908 AAGAATGAATCGTCTTGAATACTGTAAGAAACCG-AGTTATAAAAGAACTCGTAAAAG-TTGAAA
130 AGGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACA
* * * *
21095971 AGTTCGGAAGTTCATGCAATAG
194 AGTTCGGAAGTTCGTCCAAGAA
* * * *
21095993 TC-A-AGAGAAACAATTCTCACGTAAATAAGTTTTCT-TTTTAAAGACCAAAACTTGTTTACAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTT-TAATTCAAAGACCAAAACTTTTTTACAAA
* * * * * * *
21096055 ATGAAAAACTATTTTGACTAAATGATGCTATTTCCCAAGAATGGAATGTTTA-CAAATTGCTC-A
65 ATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGA
* *
21096118 ATGGAATGGATCGTCTTGAATACTTT-AGGAACCGAAGTTATAAAAAAACTTGTAAAAGTTTGAC
130 A-GGAATGGATCGTCTTGAATA-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAC
*
21096182 AAGTTTGGAAG-TCTGTCCAAGAA
193 AAGTTCGGAAGTTC-GTCCAAGAA
* * *
21096205 CCGAGAGAGAAACAATTCTCACGTAAATAAGTATTTAATTCAAAGACCAAAACTTGTTTACAAAA
1 CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
* * * *
21096270 GGACAAACAATTTAGA-AAAATGAAGCGATTT
66 TGACAAACTATTTAGACCAAATGATGCGATTT
21096301 TTCGAGNNNN
Statistics
Matches: 4498, Mismatches: 767, Indels: 342
0.80 0.14 0.06
Matches are distributed among these distances:
202 23 0.01
203 11 0.00
204 124 0.03
205 38 0.01
206 33 0.01
207 51 0.01
208 164 0.04
209 146 0.03
210 116 0.03
211 148 0.03
212 285 0.06
213 512 0.11
214 813 0.18
215 934 0.21
216 497 0.11
217 171 0.04
218 249 0.06
219 36 0.01
220 47 0.01
221 81 0.02
222 6 0.00
223 1 0.00
224 2 0.00
225 10 0.00
ACGTcount: A:0.41, C:0.15, G:0.17, T:0.28
Consensus pattern (215 bp):
CCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTTTTTACAAAA
TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGAA
GGAATGGATCGTCTTGAATATTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG
TTCGGAAGTTCGTCCAAGAA
Found at i:21097721 original size:214 final size:216
Alignment explanation
Indices: 21097018--21105030 Score: 6918
Period size: 212 Copynumber: 37.6 Consensus size: 216
21097008 AAGAGCTCGT
* * *
21097018 AAGTTTTAC-AGTTCGGAAA-TTCGTCCAATAACCAAGAGAGAAA-AATTCTCACGTAAAGAA-T
1 AAGTTTGACAAGTTC-GAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * * * *
21097079 GTTTAAATTC-AAGACCAAAAGTTTTTTCCAAAAGGACAAACTATTTAGACCAATTGATGCGATT
65 -TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATT
* * * *
21097143 TCCCGAGCGTGGAATGTTCAGAAAATTGCTCCAAGGAATGGATCGTCTTGAATACTGTAAGGAAC
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
* * *
21097208 CGAAGTTATAAATGAACACATAA
194 CGAAGTTATAAAAGAACTCGTAA
* * ** *
21097231 AAGTTTTGACAAGTTTGGAAGTTTATCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAAAAGT
1 AAG-TTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * * * *
21097296 TTTTAATTTAAAAGGCAAAAACTT-TTTACAAAATGACAAACAATTTAGA-AAAATAATGCGATT
65 TTTTAA-TTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATT
* * * * * * * ** * *
21097359 T-TCGAGCATAGAATGTT-AGAAAGTTGCTCGAAGGAATGTATCATC-TGAA-GCTGCAGGGAAT
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
* *
21097420 CGGAGTTATAAAAGAACTCAATAA
194 CGAAGTTATAAAAGAACTC-GTAA
* * *
21097444 AAGTTTGAAAAGTTCGGAAGTTTGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * *
21097507 TTTGATTCAAATACCAAAACTTGTTTCCAAAATGACAAACTATTTAGACCAAATGCTGCTATTTC
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTTC
* * * * *
21097572 CCGAGAATGAAATGTTCAAAAAATTGCTCAAAGGAATGGATCATCTTGAATACTTTAAGAAACCG
131 CCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
21097637 -AGTTATGAAAGAACTGGTAA
196 AAGTTATAAAAGAACTCGTAA
*
21097657 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAA-CAAGAGAGAAATAATTCTCACGTAAATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * *
21097721 TTTAATTCAAACAACAAAACCTT-TTTAC-AAATGACAAACTATTTAGACCAAATGAATGCGATT
66 TTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATG-ATGCTATT
* * * * * *
21097784 TCTCGAGCATGGAA--TTCGAAAAATAGCTCGAAGAGAATGGATTGACTTGAATACTTTATGGAA
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAG-GAATGGATCGTCTTGAATACTTTAAGGAA
* *
21097847 CCGAAATTATAAAAGAACTTGTAA
193 CCGAAGTTATAAAAGAACTCGTAA
* * * * * * *
21097871 AAGTTTGAGAA-ATCGAAAGTTCATCCAAGAACTAAAAG-GAAACAA-GCTCACGTAAATAAGTG
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * * *
21097933 TTTAATTCAAAGACCAAAAGTTGTGTACAAAATAACAAACTATTTAGACAAATGATGATGCGATT
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAA--ATGATGCTATT
* *
21097998 TCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGAAAC
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
* *
21098063 CAAAGTTATAAAAGAACTCATAA
194 CGAAGTTATAAAAGAACTCGTAA
* *
21098086 AA-TTTGAAAAGTTC-AATAGTTCGTCAAAGAACCAAGAGAGAAAC-ATTCTCACGT-AATAAGT
1 AAGTTTGACAAGTTCGAA-AGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * *
21098147 TTTTAATCCAAAGACCAAAAGTTTTTTTTTTTAC-AAATGACACACACTATTTATACCAAATGAT
65 TTTTAATTCAAAGACCAAAA-----CTTGTTTACAAAATGACA-A-ACTATTTAGACCAAATGAT
* * * * * * * *
21098211 G-TCATTTCCTGAGCATGTAATGTTTAGAAAATTGCTCGAATGAATGGATTGTCTTGAATAATGT
123 GCT-ATTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTT
* * *
21098275 AAGGAACCAAAGTTATAAAAGAAATCGGAA
187 AAGGAACCGAAGTTATAAAAGAACTCGTAA
* * * * *
21098305 AAGTTTAACAAGTTCGGAAGTTCGTCCAAGCACC-A-AGAGAAACCATTCTCATGT-AATAA-TT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * * *
21098366 TTTGATTCAAAG-GCAAAACTTGTTTCCAAAATGA-AGAACTATTTAGACCAAATGCTGCTATCT
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACCAAATGATGCTATTT
* * * * *
21098429 CCCGAG-ATGGAATGTTC-AGAAAGTGCTCGAAGGCATGGATCATCTTGAATGCTTTAAGGAACC
130 CCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
21098492 GAAGTTAT-AAAGAACT-GTAA
195 GAAGTTATAAAAGAACTCGTAA
* *
21098512 AAGTTTGACAAGTTCGAAAGTTCTTCCAAGAACCAAGAGAGAAACAATTCTTACGT--ATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-T
* * * * * * * * * ** *
21098575 TTTTAATTCCCAAGAGA-GAAACAATT-CTTAC---GTAACTAAGTTTTTA-ATTCAATCAACAA
65 TTTTAATT--CAA-AGACCAAA-ACTTGTTTACAAAATGACAAACTATTTAGA-CCAA--ATGAT
* ** * ** *** * * *
21098634 GACTTTTTTACAAATAACAAACTATT-AGACCAAATGATGCGATTTCCG-A-GCATGGAAT-GT-
123 G-CTATTTCCCGAGCATGGAA-TGTTCA-A-AAAAT--TGC----T-CGAAGGAATGG-ATCGTC
* * * *
21098694 TTTAAAAATTGATCGAAGGAATGGATCGTCTTGAATACATTATGGAACTGAATTATAAAAGAACT
176 TTGAATACTT--T--AAGG-A---A-C--C--G-A-A-GTTAT---A----------AAAGAACT
21098759 CGTAAA
212 CGT-AA
* * *
21098765 AAG-TTGACAAGTTCGGAAGTTCGTCCAAGAACCACA-ATAGAAACAACTCTCACGTAAATAAGT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCA-AGAGAGAAACAATTCTCACGTAAATAAGT
* * * * * * * *
21098828 ATGTAATTCGAAGACCAAAACTTTTTTACAAAATGACAAACAATTTAGA-AAAATGATACGATTT
65 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTT
* ** * * * * * * *
21098892 TCTAAGCA--AAATATTTAGAAAGTTGCTCCAAGGAATGTATCGTCTTG-ATA-TTGTAAGGAAC
130 CCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTT-TAAGGAAC
*
21098953 CGAATTTATAAAAGAACTCGT-A
194 CGAAGTTATAAAAGAACTCGTAA
* * * * * *
21098975 AATTTTGATAAGTTCAAAAGTTTGTCTAAGAACCAAGAGAGAAACAATTCTCA-GTAAAAAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-T
* * * * * *
21099039 CTTTTAATTCAAA-CCACAAAACTTGTTCACAAAATGATAAACTATTTATACC-AATAATGCGAT
65 -TTTTAATTCAAAGAC-CAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTAT
* * *
21099102 TTCCCGAACATGGAATGTTCGAAAATAATT--T-GAAGGAGTGGATTGTCTTGAATACTTTAAGG
128 TTCCCGAGCATGGAATGTTC-AAAA-AATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
*
21099164 AACCG-AGTTGTAAAAG-ACTCGTAA
191 AACCGAAGTTATAAAAGAACTCGTAA
** * * *
21099188 AAGTTTGATTAGTTTCGAAAGTTCATCAAAGAACCAAG-GAG-AACAATCCTCACGTAAATAAG-
1 AAGTTTGACAAG-TTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * *
21099250 TTTTAATTCAAAGA-CTAAAGTTGTTTACACAATTGACAAACTATTCAGACACCAAAATTGATGC
65 TTTTAATTCAAAGACCAAAACTTGTTTACA-AAATGACAAACTATTTAG--ACC-AAA-TGATGC
* * * * *
21099314 AATTTCTCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTAAATACTATAAG
125 TATTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
* *
21099379 GAACC-AAGTTATAAAATAACTCAT-A
190 GAACCGAAGTTATAAAAGAACTCGTAA
* * * *
21099404 ATGTTTGA-AAGTTCGGAAGTTCATCCAAGAGCC-A-AGAGAAACAATTCTCACGTAAATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-T
* * * * *
21099466 TTCATTCATTTTAAGAGACCAAAACTTGTTTACAAAATGAAAAACTATTTAGACTAAATGATGCG
65 TT--TT-AATTCAA-AGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCT
* * * * *
21099531 A-TTCCCGAGAATAGAATTTTC-AAAAATTGCTC-AATGAATGGATCGTTTTGAATACTTTAAGG
126 ATTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
21099593 AACCGAAGTTATAAAAGAACTCGT-A
191 AACCGAAGTTATAAAAGAACTCGTAA
* * * * *
21099618 AAGTTTGACAAGTT-GGAAGTTCATCCAAGAACCGAGAGAGAAAC-ACTCTCACGTAAATAAGTA
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * **
21099681 TTGAATTCAAAGACCAAAACTTGTTTACACAAAAGGACAAA-TAATTTA-AAAAAATGATG-TGA
66 TTTAATTCAAAGACCAAAACTTGTTT--ACAAAATGACAAACT-ATTTAGACCAAATGATGCT-A
** * * ** * * * * *
21099743 TTTTTTCGAGCATAGAATGTTTAGAAAGTTTGCTCGAAGGAATGTACCATCTTGAATAATGTAAG
127 -TTTCCCGAGCATGGAATGTTCA-AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
21099808 GAACCGAAGTTATAAAAGAACTCGTAA
190 GAACCGAAGTTATAAAAGAACTCGTAA
* * * * * *
21099835 ATGCTTGACAAGTTTCGGAAGTTCAT-CAAGAACC-A-CGAGAAACAATTCTCACGTAAAT--TT
1 AAGTTTGACAAG-TTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * *
21099895 TTTTGATTTAAAGA-CAAAACCTTGTTTCCAAAATGAC-AACT-TTTAGACCAAATGCTGTTATT
65 TTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTA--
* * * * *
21099957 TTTCCCGAGAACGG-ATGTTCAAAAAATTGATCAAAGGAATGGATCATCTTG-ATA-TTTAAGGA
127 TTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGA
* *
21100019 ATCGAAGTTATGAAAAGAACTCATAA
192 ACCGAAGTTAT-AAAAGAACTCGTAA
* * * *
21100045 AAGTTTGACCAGTTCGAAAGTTCATCCAAGAACCAAGAGACAAACAACTCTCACGTAAATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* ** * * * * *
21100110 TTTAATTCAAACAATAAAACTTTTTTATAAAATGACAAACTTTTTAGACCAAATAATGCCATTTC
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTTC
* * * * * * *
21100175 CCAATGCAT-GAATATTCAGAAAACTGCTCAAAGGAATGGATCGTCTTGAATACTTTATGGAACT
131 CCGA-GCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
*
21100239 GATA-TTATAAAA-AGCTCGTAA
195 GA-AGTTATAAAAGAACTCGTAA
* * * * * * * *
21100260 AAGTTTGACAGGTTTGGAAGTTCATCC-AGAACCAAAAGAGAAAC-ATTCTCACAT-AATGAGTA
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * * * * *
21100322 TTTAATTCAAATACAAAAACTTGTTTACAAAAGGACAAACAATTTAGA-AAAATGATGCGATTTT
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTTC
** * * ** * ** **
21100386 TTGAGCATAG-ATGTTTAAGAATGTTGCTCGAAGGAATGTATCGTCTTGAATACGGTAAGGAATA
131 CCGAGCATGGAATGTTCAA-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
*
21100450 GAAGTT-TATAAAGAACACGTAA
195 GAAGTTATA-AAAGAACTCGTAA
* * *
21100472 ATGTTTGACAGGTTC-AGAAGTTCAT-CAAGAACC-A-AGAGAAACAATTCTC-CGTAAATAAGT
1 AAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-
* * * *
21100532 TTTTTTATTCAAAGACCAAAATTTGTTT-CCAAATGACAAACT-TCTT-GAACCAAATGCTGCTA
64 TTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTAT-TTAG-ACCAAATGATGCTA
* * * *
21100594 TTTCCCGAGAATGGAATGTT-TAGAAATTGCTCGAAGGAATGGATCGTCTTCAATACTTTAAGGA
127 TTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGA
** * * *
21100658 ATTGAAGTGATGAAAGAACTCATAA
192 ACCGAAGTTATAAAAGAACTCGTAA
* * * ** *
21100683 AATTTTTGACCAGTTCAAAAGTTCGTGTAAG-ATCAAGAGAGAAACAATTCTCACGTAAATAAG-
1 AA-GTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * * **
21100746 TTTTAATTCAAACACC-AAACTTTTTTATTACAAAATGACACATTATTTATATAAAATGATG-TC
65 TTTTAATTCAAAGACCAAAAC--TTGT-TTACAAAATGACAAACTATTTAGACCAAATGATGCT-
* * * * * * *
21100809 ATTTCCTGATCATGTAATGTT-TAGAAATTGCTCGAAGGAATGGATCGTCTTGAATAATGTAAGG
126 ATTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
* * *
21100873 AACCAAATTTAT-AAACAACTCGTAA
191 AACCGAAGTTATAAAAGAACTCGTAA
* * *
21100898 AAGTTTGACACAGTTCGGAAGTTCGTCCAAGAA-CAA-AGAGAAGCAATTCTCACGTAAATAAAA
1 AAGTTTGACA-AGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAT-AAG
* * * *
21100961 TTTTTGATTCAAAGACCAAAACTTGTTT-CTAAAATGA-GAACTATTTAGACCAAATGCTACTAT
64 TTTTTAATTCAAAGACCAAAACTTGTTTAC-AAAATGACAAACTATTTAGACCAAATGATGCTAT
* * * *
21101024 CTCCCGAGAATGGAATGTTC-AGAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAG
128 TTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA
* * *
21101088 TCGAAGGT-T-CAAGAACTCGT-A
193 CCGAAGTTATAAAAGAACTCGTAA
* * *
21101109 AAGTTTGACCAGTTCAAAAGTTCGT-------CC-A-AGAGAAACAATTCTCACGTAAATAAGTG
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * * *
21101165 TTT-ATTCAAAGAACC-AAAGTTATTCACAAAATAACAAACTATTTAGACCAAATGATGCGATTT
66 TTTAATTCAAAG-ACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTT
* * * *
21101228 CCCGAGCATGGAATGTTTGAAAAAATTGC-CTAAGGAATGGATCGTCTTGAATACTCTAAGAAAC
130 CCCGAGCATGGAATG-TTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
* *
21101292 TGAAGTTATAAAAGAACTCATAA
194 CGAAGTTATAAAAGAACTCGTAA
* * * *
21101315 AAGTTTGAAAAGTTCGGAAGTTCGTCAAAGAACCAA-AGAGAAACAATTTTCACGT-AATAAGTG
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAA--G
* * * * * * * *
21101378 TTTTGTAAAATCCAAGATCAAAAGTTTTTTAC-AAATGACACACTA-TTATACAAAATGATG-TC
64 TTTT-T-AATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCT-
* * * * **
21101440 ATTTCCCGAGCATGGAATGTTTAGAAAATTGCTCGATGGAATGGATTGTCTTGAATA-AGTAAGG
126 ATTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
* *
21101504 AACTGAAGTTATAAAA-AACTCAT-A
191 AACCGAAGTTATAAAAGAACTCGTAA
* * * *
21101528 AAGTTTGACAAGTTCGGAAGTTCGTTCAACAACC-A-AGAG-AACAATTCTCACGTAAATAAATT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * *
21101590 TTTGATTCACAGACCAAAACTTGTTTCCAAAATGA-AGAACTATTTAGACCAAATGATGCTATCT
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACA-AACTATTTAGACCAAATGATGCTAT-T
* * * * * *
21101654 T-CCGAGAATGAAATGTTC-ATAAATTGCT-GAAGAAATGGATCGTCTTGAATGCTTTAAGGAGC
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
*
21101716 CGAAGTTATGAAAGAACTCGTAA
194 CGAAGTTATAAAAGAACTCGTAA
* * **
21101739 AAGTTTGATC-ATTTCAAAAGTTTATCCAAGAACCAAGAGAGAAACAATTCTCAC----ATAAGT
1 AAGTTTGA-CAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * *
21101799 TTTTAATTCAAAAAACAAAACTTTTTTACAAAATGACAAACTATTTAGACCAAATGATG-TGATT
65 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCT-ATT
* * * * *
21101863 TCCC-AGCATGAAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAGTACTCT-AGAAAA
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG-GAA
21101926 CCGAAGTTATAAAAGAACTCGTAA
193 CCGAAGTTATAAAAGAACTCGTAA
* *
21101950 AAGTTTG---AG---G-AACTTCGT-CAAGAACCAATAGAGAAACAATTCTCACGT-AATAAGTG
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT-
* * * * *
21102006 TTTTAATCCAAAGA-CAAAAGTTTTTTTACAAAATGACATACTATTTATACCAAATGATGC-ATT
65 TTTTAATTCAAAGACCAAAA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATT
* * * * * *
21102069 TCCCGAGCATGTAAT-TTTAGAAAATTGCTCGAAGGAATGGATCGTCTTGAGTACTCTAAGAAAC
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
21102133 CGAAGTTAT-AAAGAACTCGTAA
194 CGAAGTTATAAAAGAACTCGTAA
* * * * * ** *
21102155 AAG-TTGAAAAGTTTGGAACTTCGTCAAAGAACCAATTGAGAAACAATTCTCACGTAAATAAATT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * * *
21102219 TTTGATTCAAAGA-CACAACTTG-TTCCAAAATGA-ATA-T-TTTAGACCAAATGATGCTATCTC
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTTC
* * * * *
21102279 CGGAG-ATGGAATGTTCAGAAAATTGCTCG-ACGAATGGATCGTCTTGAATACTTGAAGGAACAG
131 CCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
*
21102342 AAGTT-TATGAAGAACTCGT-A
196 AAGTTATA-AAAGAACTCGTAA
* *
21102362 AAGTTTGACAAGTTCGAAAGTTCTTCCAAGAATCAAGAGAGAAACAATTCTCACGTAAAT-AGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * * * *
21102426 TTTAATTCAAACAAC-AAATTTTTTTCACAAAATGACAAACTATTTAGACAAAATGATGCAATTT
66 TTTAATTCAAAGACCAAAACTTGTTT-ACAAAATGACAAACTATTTAGACCAAATGATGCTATTT
** * * *
21102490 CCCGAGCATGGAATGTT-TGAAAATTGCTCGAAGGAATGGACCATCTTGAATACTTTATGGAA-C
130 CCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
* *
21102553 GAAATTATAAAAGAAGTCGTAA
195 GAAGTTATAAAAGAACTCGTAA
* * * * *
21102575 AAGTTTAACAAGTTCGAATGTTCGTCAAAGAA-CAAGAGTGAAACAATTCTCACGT-AATAAGGT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* ** * * * *
21102638 TTTAATCCAAAGACCAAAGTTTTTTTAAACAAAATGACAGACTATTTATACC-AATGATGCCATT
66 TTTAATTCAAAGACCAAAACTTGTTT--ACAAAATGACAAACTATTTAGACCAAATGATGCTATT
* * * * * * *
21102702 TCTCGAGCATGTAATGTTCAAAAAAGTGCTCGAAGGAATGGATCATCTTGAATAATGTAAGGAGC
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
*
21102767 CGAAGTTATAAAATAACTCGTAAA
194 CGAAGTTATAAAAGAACTCGT-AA
*
21102791 AAGTTTGACAAGTTCGTAAGTTCGTCCAAGAA-C-A-A-AGAAACAATTCTCACGTAAATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * * * * * *
21102852 TTTGATTCAAAGACCAAAAC-TGTTT-CCAAATGA-GAACTATTTCGACTAAATGTTACTA-TCC
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTTC
* * * * * * *
21102913 TCCGAGAATGGAATGTTCAGAAAATTGATCGAAGGAATGCATCATCTTGAATGCTTT-AGGAGCC
131 -CCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
*
21102977 GAAGTTATGAAAGAACTCGTAA
195 GAAGTTATAAAAGAACTCGTAA
* *
21102999 AAGTTTGACCAGTTCGAAAGTTCTTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-T
* * * *
21103062 TTTTAATTC-AAGCAACAAAACTTTTTTAGAAAATGACAAACTATTTAGACCAAATGATGCGA-T
65 TTTTAATTCAAAG-ACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATT
* *** * *
21103125 TCCC-A-CATGGAATATTTGGAAAATTGCTCGAAGGAATGGATCGTCTTGAATACATTATGGAAC
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
* *
21103188 TGAA-TTAT-AAAGAACTCGCAA
194 CGAAGTTATAAAAGAACTCGTAA
* * * *
21103209 AAGTTTAACAAGTT-GAAAGTTCGTCCAAGAACCAAAAGACAAAAAAATTCTCTCACGTAAATAA
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGA-GAAACAA-T-TCTCACGTAAATAA
* * * * * *
21103273 GTATGTAATTCAAAGACCAAAACTTTTTTACAAAATGACAAACAATTTAGA-AAAATGATGCGAT
63 GTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTAT
* * * * * *
21103337 TTTCCGAGCATAGAATGTTTAGAAAGTTGCTCGAAGGAATGTATCGTCTTGAATA-TTGTAAGG-
128 TTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTT-TAAGGA
21103400 A--GAAGTTATAAAAGAACTCGTAA
192 ACCGAAGTTATAAAAGAACTCGTAA
* * ** * * * *
21103423 AATTTTGACTAGTTC-AGAAGTTTTTCTAAGAACCAAGAGAGAAACAA-TCTCATGTAAAAAAAT
1 AAGTTTGACAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGT-AAATAAG
* * *
21103486 TCTTTTAATTC-AACACAAAAACTTGTTTACAAAATGACAAACTAATTATG-CCAAATGATG-TG
64 T-TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTA-GACCAAATGATGCT-
** * * * *
21103548 ATTTTTCCCGATTATGGAATGTTC-GAAAATAGCTTGAAGGAGT-GA-CTGTCTTGAATACTTTA
126 A--TTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATC-GTCTTGAATACTTTA
* *
21103610 AGGAACTGAAG-TGTAAAAGAACTCGTAA
188 AGGAACCGAAGTTATAAAAGAACTCGTAA
** * * * * * * * *
21103638 AAGTTTGATTAGTTCGGAAGTTCGTCAAAGAACC-AGGGAG-AGCAATCCTCAAGTAAATAGGTG
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * *
21103701 TTTAATTCAAAGACCAAAAGTTATTTAC-AAATGACAAACTATTTAGAGGCAAATGATGCGATTT
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGA-CCAAATGATGCTATTT
** * * *
21103765 CCCGAGCATGGAATGTTTGAAAAATTGCTCGAAAGAATGAATCGTCTTGAATACTGTAAGGAACC
130 CCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
21103830 G-AGTTATAAAAGAACTCGT-A
195 GAAGTTATAAAAGAACTCGTAA
* * * * * **
21103850 AAGTTTGAAAAGTTCGGAAGTTCATGCAATAGTC-A-AGAGAAACAATTCTCACGTAAATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
** * * *
21103913 TTTCTTTTTAAAGACCAAAACTTGTTTACAAAATGA-AAACTATTTTGACTAAATGATGCTATTT
66 TTT-AATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTT
* ** *
21103977 CCC-AGAATGGAATGTTTTACAAATTGCTC-AATGGAATGGATCGTCTTGAATACTTTAAGGAAC
130 CCCGAGCATGGAATGTTCAAAAAATTGCTCGAA-GGAATGGATCGTCTTGAATACTTTAAGGAAC
* *
21104040 CGAAGTTATAAAAAAACTTGTAA
194 CGAAGTTATAAAAGAACTCGTAA
* * *
21104063 AAGTTTGACAAGTTTGGAAG-TCTGTCCAAGAACCGAGAGAGAAACAATTCTCACGTAAATAAGT
1 AAGTTTGACAAGTTCGAAAGTTC-GTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT
* * * * *
21104127 ATTTAATTCAAAGACCAAAACTTGTTTACAAAAAGGACAAACAATTTAGA--AAATGAAGCGATT
65 TTTTAATTCAAAGACCAAAACTTGTTTAC-AAAATGACAAACTATTTAGACCAAATGATGCTATT
** * * * * * * *
21104190 TTTCGAGCGTAGAATGTT-TAGAAATTGCTCGAAGGAATGTATCGTCTTGAATAATGTAAGGAAC
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
*
21104254 TGAAGTTATAAAAGAACTCGTAA
194 CGAAGTTATAAAAGAACTCGTAA
* * * *
21104277 ATGTTTGACAAGTTCGGAAGTTCATCCAAGAACC-A-AGAG-AATAATTCTCACGT-AATAA-TT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * * **
21104337 TTTGATTCAAAGACCAAAACTTGATTCCAAAATGACAAACTATTTAGACCAAATCCTGCTATTTC
66 TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTTC
* * * * *
21104402 CAGAGAATAGAATGTTCAGAAAATTGCTCGAA-GAATGGATCGTCTTGAATACTTTAAGGAATCG
131 CCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
*
21104466 AAGTTATGAAAGAACTCGTAA
196 AAGTTATAAAAGAACTCGTAA
* *
21104487 AAGTTTGACCAGTTCG-AAGTTCATCCAAGAACCAAGAGAGAAACAA-TCTCACGTAAATAAGTT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG-T
* * * *
21104550 TTTTAATTCAAACAAC-AAACATT-TTTACATAATGAC-AACTATTTAGACCAAATGATGCGATT
65 TTTTAATTCAAAGACCAAAAC-TTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATT
* * * * *
21104612 TCTCGAGCATGG-ATGTTCAGAAAATTGCTCGAAGGAATGGATCGCCTAGAATACTTTATGGAAC
129 TCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
21104676 CGAA-TTATAAAAGAACTCGTAA
194 CGAAGTTATAAAAGAACTCGTAA
* *
21104698 AAGTTTGACAAGTTCG-AATTTCATCCAAGAACCAA-AGAGAGAACAATTCTCACGTAAATAAGT
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGA-AACAATTCTCACGTAAATAAGT
* * * * * *
21104761 ATTTAATTCAAAAACTAAAATTTGTTTACAAAATGACAAAC-ATATAGACCAAATGATGCGATTT
65 TTTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTT
* * *
21104825 CCCAAGCATGGAATGTTCAAAAAATTGCTCGAAGG-ATGGATCGTCTTGAATACTCTAAGAAACC
130 CCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
*
21104889 GAAGTTAT-AAAGAACTCATAA
195 GAAGTTATAAAAGAACTCGTAA
* * ** * * *
21104910 AAGTTTAACAAGTTTGAAAGTTCGTTAAAGAACCAAGAGAG--ATAATTCTCACGT-AATATGTG
1 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
* * ** * *
21104972 TTTAATCCAAAGACCAAAAGTT-TTTAACAAAATGACACTCTATTTATACCGAATGATGC
66 TTTAATTCAAAGACCAAAACTTGTTT-ACAAAATGACAAACTATTTAGACCAAATGATGC
21105031 CATTACTCGA
Statistics
Matches: 6353, Mismatches: 1057, Indels: 782
0.78 0.13 0.10
Matches are distributed among these distances:
201 21 0.00
202 47 0.01
203 87 0.01
204 18 0.00
205 25 0.00
206 93 0.01
207 171 0.03
208 183 0.03
209 281 0.04
210 574 0.09
211 687 0.11
212 947 0.15
213 863 0.14
214 801 0.13
215 595 0.09
216 407 0.06
217 98 0.02
218 61 0.01
219 126 0.02
220 49 0.01
221 32 0.01
222 8 0.00
223 5 0.00
224 2 0.00
225 8 0.00
226 2 0.00
227 1 0.00
228 1 0.00
229 1 0.00
230 2 0.00
232 2 0.00
233 1 0.00
234 1 0.00
235 1 0.00
236 2 0.00
237 8 0.00
239 2 0.00
240 6 0.00
241 8 0.00
242 2 0.00
244 3 0.00
246 3 0.00
247 4 0.00
248 4 0.00
250 14 0.00
251 19 0.00
252 47 0.01
253 15 0.00
254 14 0.00
255 1 0.00
ACGTcount: A:0.40, C:0.15, G:0.17, T:0.28
Consensus pattern (216 bp):
AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT
TTTAATTCAAAGACCAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCTATTTC
CCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
AAGTTATAAAAGAACTCGTAA
Found at i:21098588 original size:40 final size:41
Alignment explanation
Indices: 21098544--21098624 Score: 139
Period size: 40 Copynumber: 2.0 Consensus size: 41
21098534 CTTCCAAGAA
21098544 CCAAGAGAGAAACAATTCTTACGT-A-TAAGTTTTTTAATTC
1 CCAAGAGAGAAACAATTCTTACGTAACTAAG-TTTTTAATTC
21098584 CCAAGAGAGAAACAATTCTTACGTAACTAAGTTTTTAATTC
1 CCAAGAGAGAAACAATTCTTACGTAACTAAGTTTTTAATTC
21098625 AATCAACAAG
Statistics
Matches: 39, Mismatches: 0, Indels: 3
0.93 0.00 0.07
Matches are distributed among these distances:
40 24 0.62
41 11 0.28
42 4 0.10
ACGTcount: A:0.38, C:0.16, G:0.12, T:0.33
Consensus pattern (41 bp):
CCAAGAGAGAAACAATTCTTACGTAACTAAGTTTTTAATTC
Found at i:21105452 original size:214 final size:215
Alignment explanation
Indices: 21105041--21108121 Score: 3584
Period size: 215 Copynumber: 14.4 Consensus size: 215
21105031 CATTACTCGA
* * * * *
21105041 GATCGTCTTAAATAATGTAAGG-ATCGAAGTTAT-AAAGAACTCGTAAAAATTTGACAAGTTCGG
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* *
21105104 AAGTTCGTCCAAGAA-C-A-AGAGAACCAATTCTCACGTAAATAAGTTTTTGATTCAAAGATCAA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA-CAA
* * * * * * *
21105166 AACTAGTTTCCAAAATGA-AGACTATTTAGACCAAATGCTGCTATTTCCCGAGAATGGAGTGTTC
130 AACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTC
21105230 AG-AAATTGCTCGAAGGAATG
195 AGAAAATTGCTCGAAGGAATG
* * * *
21105250 GATCGTCTTGAATGCTTTAAGGAACCAAAGTTATGAAAGAACTCGTAAAAGTTTGACAAGTTCGA
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* * * **
21105315 AAGTTCTTCCAAGAACCAAGAGAAAAACAATTCTCACATAAATAAGTTTTTAATTCAAAGA-ATT
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACAAA
** * * *
21105379 TTTTTTTTTCAAAATGACAAACTATTTAGACCAAATGATGCCGATTT-CCAAGCATGGAATGTTC
131 ACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATG-CGATTTCCCGAGCATGGAATGTTC
* *
21105443 GGAAAATTGCTTGAAGGAATG
195 AGAAAATTGCTCGAAGGAATG
* * * *
21105464 GAT-GTCTTGAATACTTTATGGAACTGAAATTAT-AAAGAACTCGTAAAAGTTTGACAAGTTTGG
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* * *
21105527 AAGTTCGTCCAAGCACCAA-AGAGAAACAATTCTCACGTAAATAAGTATTTAATTCAAAAACCAA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA-CAA
* *
21105591 AACTTGTTTACAAAATGACAAA-TAATTTAGA--AAATGATGCGATTTTCCGAGCATAGAATGTT
130 AACTTGTTTACAAAATGACAAACT-ATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * *
21105653 TAGAAAGTTGCTCGAAGGAATA
194 CAGAAAATTGCTCGAAGGAATG
* * * * * *
21105675 TATCATCTTGAATACTGTAAGGAACCGAAGTTACAAAAGAACTCGTAAAATTTTGACAAGTTCAG
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
** * * * * *
21105740 AAGTTCGTATAAGAACTAAAAGAGAAACAATTCTCATGTAAA-AAATTCTTTAATTCAAAACACA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTT-TTTAATTC-AAAGACA
* *
21105804 AAACTTGTTTACAAAATGACAAACTATTTATACCAAATGATGCGATTTCCCGAGAATGGAATGTT
129 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* * *
21105869 CGGAAAATTGCTCGAATGAGTG
194 CAGAAAATTGCTCGAAGGAATG
* * * * * *
21105891 GATTGTCTTGAATACTTTATGGAATCGAAGTTGTAAAAAAAACTCGTAAAAGTTTGACTAGTTCG
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCG
* * * * * *
21105956 GAAGTTTGTCAAAGAACCAAG-GAG-AACAATCCTCGCGTAAATGAGTGTTTT-ATTCAAAGACC
65 GAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGT-TTTTAATTCAAAGACA
*
21106018 AAACATTGTTTACAAAATGACAAACTATTTAGAGCAAATGATGCGATTTCCCGAGCATGGAATGT
129 AAAC-TTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGT
* *
21106083 T-TGAAAAATTGCTCGAAAGAATG
193 TCAG-AAAATTGCTCGAAGGAATG
* * *
21106106 AATCGTCTTGAATACTGTAAGGAACCG-AGTTTATAAAAGAACTCGTAAAAGTTTGAAAAAGTTC
1 GATCGTCTTGAATACTTTAAGGAACCGAAG-TTATAAAAGAACTCGTAAAAGTTTG-ACAAGTTC
* * * ** ** *
21106170 GG-AGTTCATGCAATAGTC---AGAGAAACAATTCTCACGTAAATAAGTTTTTTTCGTTTTAAAG
64 GGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAG--TTTTT-AATTCAAAG
* * * * * * * *
21106231 ACCAAACCTGTTTACAAAATGAAAAACTATTTAGACTAAATGATACAATTTACCAGAGAATGGAA
126 ACAAAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTT-CCCGAGCATGGAA
*
21106296 TGTTCA-AAAATTGCTC-ATTGGAATG
190 TGTTCAGAAAATTGCTCGA-AGGAATG
* *
21106321 GATCGTCTTGAATACTTTAAGGAATCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTGG
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* * *
21106386 AAGTTCGTCCAAGAATCGAGAGAGAAACAATTCTCACGTAAATAAGTATTTAATTCAAAGACCAA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA-CAA
* * * * ** * *
21106451 AACTTGTTTACAAAAGGACAAACAATTTAGA-AAAATGATGCAATTTTTCGAGCATAGAATGTTT
130 AACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTC
*
21106515 AGAAAGTTGCTCGAAGGAATG
195 AGAAAATTGCTCGAAGGAATG
* ** *
21106536 TATCGTCTTGAATAACCGTAAGG-A-C----TTATAAAA-AACTCGTAAATGTTTGACAAGTTCG
1 GATCGTCTTGAAT-ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCG
* * * * * *
21106594 GAAGTTCATACAAGAACC-A-AGAGAAACAATTCTCAAGTAAATAAGTTTCTGATTCTAAGATCA
65 GAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA-CA
* * * * *
21106657 AAACTTGTTTCCAAAATGAAAAACTATTTAGACCAAATGCTGCTATTTCCCGAGAATGGAATGTT
129 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* *
21106722 CAAAAAATTGCTCAAAGGAATG
194 CAGAAAATTGCTCGAAGGAATG
* * *
21106744 GATCGTCTTGAATACTTGAAGGAACCGAAGTTATGAAAGAACTCGTAAAAGTTTGACAAGTTCGA
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* * *
21106809 AAGTTCTTCCAAGAACCAAGAGAGAAACAATTTTCACGTAAATAAG-TTTTAATTCAAACAACAA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAA-GACAA
* ** *
21106873 AACTTTTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTTTCGAGCATGGAATGTTT
130 AACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTC
*
21106938 GGAAAATTGCTCGAAGGAATG
195 AGAAAATTGCTCGAAGGAATG
* * * * * * *
21106959 GATCGTCTTGAATACTTTATGGAACTGAAATTATAAAACAAGTAGTAAAAGTTTGACAAGTTCGA
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* * *
21107024 AAGTTCGT-CAAGAACCAAGAGAGAAACAATTCTCACAT-AATAAGTGTTTAATCCAAAGACCAA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA-CAA
* * * * * * * * *
21107087 AAGTTTTTTATAGAATGACACACTATTTATACCAGATGATGCCATTTCCCGAGCATGTAATGTTC
130 AACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTC
*
21107152 AGAAAAATGCTCGAAGGAATG
195 AGAAAATTGCTCGAAGGAATG
* * * * *
21107173 GATCGCCTTGAATAATGTAAGGAACCGAAGTTATAAAAAAACTTGTAAAAGTTTGACAAGTTCGG
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* * *
21107238 AAGTTC-TCC-AGAACC-A-AGAGAAATAGTTCTCACGTAAATAAGTTTTTGATTCAAAGACCAA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA-CAA
* * * *
21107299 AACTTGTTTCCAAAATGA-AGAACTATTTAGACCAAATGCTGCTATTTCCCGAGAATGGAATGTT
130 AACTTGTTTACAAAATGACA-AACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
*
21107363 CAGAAAATTGCTCTAAGGAATG
194 CAGAAAATTGCTCGAAGGAATG
* * * * *
21107385 GATTGTCTTGAATGCTTTAAGGAACCGAAGTTATGAAAGAACACGTAAAAGTTTGACAAGTTCGA
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* * *
21107450 AAGTTCTTCCAAGAACTAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAACAACAA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAA-GACAA
*
21107515 AACCTT-TTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
130 AA-CTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
*
21107579 -TGAAAAATTGCTCGAAGGAATG
194 CAG-AAAATTGCTCGAAGGAATG
* ** *
21107601 GAT-GTCTTGAATACTTTATGGAACTAAAATTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* * * *
21107665 AAGTTCGTCCAAGAACCAAAAGAGAAATAATGCTCACGTAAATAAGTATTTAATTCAAAGAGCAA
66 AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA-CAA
* * * * * * * *
21107730 AGCTTGTTTGCAAAATGACAAACAATTTAGA-AAAATGATGAGATTTTCCGAGCATAGAATGTTT
130 AACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTC
*
21107794 AGAAAGTTGCTCGAAGGAATG
195 AGAAAATTGCTCGAAGGAATG
*
21107815 TATCGTCTTGAATA-TTGTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCG
1 GATCGTCTTGAATACTT-TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCG
*
21107879 GAAGTTCGTCCAAGAACC-A-AGAGAAACAATTCTCACGTAAATAAGTTTTTGATTCAAAGACCA
65 GAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA-CA
* * * * ** *
21107942 AAACTTGTTTCCAAAATGACAAATTATTTAGACCAAACGCTGTTATTTCCCGAGAATGGAATGTT
129 AAACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
* *
21108007 CAAAAAATTGTTCGAAGGAATG
194 CAGAAAATTGCTCGAAGGAATG
* * * * * *
21108029 GATCGTCTTGAATACTTTAAGGAATCAAAGTTATGAAAGAACTCGTAATAGTTTGACCAGTTCGA
1 GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
* *
21108094 AAGTTTGTCCATGAACCAAGAGAGAAAC
66 AAGTTCGTCCAAGAACCAAGAGAGAAAC
21108122 TACATACCAT
Statistics
Matches: 2427, Mismatches: 367, Indels: 149
0.82 0.12 0.05
Matches are distributed among these distances:
207 72 0.03
208 57 0.02
209 57 0.02
210 23 0.01
211 137 0.06
212 241 0.10
213 240 0.10
214 576 0.24
215 655 0.27
216 295 0.12
217 48 0.02
218 26 0.01
ACGTcount: A:0.40, C:0.14, G:0.18, T:0.28
Consensus pattern (215 bp):
GATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACAAA
ACTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCA
GAAAATTGCTCGAAGGAATG
Done.