Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: CP032247.1 Gossypioides kirkii chromosome KI_05
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 50980411
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 1700 characters in sequence are not A, C, G, or T
File 120 of 171
Found at i:38043516 original size:25 final size:24
Alignment explanation
Indices: 38043488--38043564 Score: 73
Period size: 25 Copynumber: 3.0 Consensus size: 24
38043478 TTTTTTATCT
38043488 CTATTTTACCCTAGTAAAATTTTGA
1 CTATTTTACCCT-GTAAAATTTTGA
*
38043513 CTATTTTAACCCCTGATAAAAATTTGA
1 CTATTTT-A-CCCTG-TAAAATTTTGA
** *
38043540 AGATTTTACCTTGGTAAAATTTTGA
1 CTATTTTACCCT-GTAAAATTTTGA
38043565 TAAAATATGT
Statistics
Matches: 43, Mismatches: 5, Indels: 8
0.77 0.09 0.14
Matches are distributed among these distances:
25 20 0.47
26 4 0.09
27 19 0.44
ACGTcount: A:0.34, C:0.14, G:0.10, T:0.42
Consensus pattern (24 bp):
CTATTTTACCCTGTAAAATTTTGA
Found at i:38044385 original size:20 final size:19
Alignment explanation
Indices: 38044358--38044404 Score: 58
Period size: 19 Copynumber: 2.4 Consensus size: 19
38044348 TACAAAAAAA
38044358 TCAAAATAACTTTCAAATTT
1 TCAAAATAA-TTTCAAATTT
* **
38044378 TGAAAATAATTTTTAATTT
1 TCAAAATAATTTCAAATTT
38044397 TCAAAATA
1 TCAAAATA
38044405 TTTATAAAAA
Statistics
Matches: 23, Mismatches: 4, Indels: 1
0.82 0.14 0.04
Matches are distributed among these distances:
19 15 0.65
20 8 0.35
ACGTcount: A:0.47, C:0.09, G:0.02, T:0.43
Consensus pattern (19 bp):
TCAAAATAATTTCAAATTT
Found at i:38044468 original size:21 final size:21
Alignment explanation
Indices: 38044442--38044491 Score: 57
Period size: 21 Copynumber: 2.4 Consensus size: 21
38044432 TTAAAAAGTT
38044442 AAAAAA-ATAAAAATATATATA
1 AAAAAATATAAAAAT-TATATA
* *
38044463 AAAAAATTTAAAAATTTTATA
1 AAAAAATATAAAAATTATATA
*
38044484 AAATAATA
1 AAAAAATA
38044492 ATTCTGAAAT
Statistics
Matches: 24, Mismatches: 4, Indels: 2
0.80 0.13 0.07
Matches are distributed among these distances:
21 17 0.71
22 7 0.29
ACGTcount: A:0.70, C:0.00, G:0.00, T:0.30
Consensus pattern (21 bp):
AAAAAATATAAAAATTATATA
Found at i:38052883 original size:16 final size:16
Alignment explanation
Indices: 38052848--38052880 Score: 52
Period size: 16 Copynumber: 2.2 Consensus size: 16
38052838 TAATTGTTTT
38052848 GTTA-TAAATTACTCA
1 GTTACTAAATTACTCA
38052863 GTTACTAAATTACT-A
1 GTTACTAAATTACTCA
38052878 GTT
1 GTT
38052881 TACCCTTTAT
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
15 8 0.47
16 9 0.53
ACGTcount: A:0.36, C:0.12, G:0.09, T:0.42
Consensus pattern (16 bp):
GTTACTAAATTACTCA
Found at i:38055115 original size:14 final size:13
Alignment explanation
Indices: 38055092--38055126 Score: 52
Period size: 14 Copynumber: 2.6 Consensus size: 13
38055082 ACATCCAAAA
38055092 AAATCAAGTTAGT
1 AAATCAAGTTAGT
*
38055105 ATAATCGAGTTAGT
1 A-AATCAAGTTAGT
38055119 AAATCAAG
1 AAATCAAG
38055127 GGTTAGTGAA
Statistics
Matches: 19, Mismatches: 2, Indels: 2
0.83 0.09 0.09
Matches are distributed among these distances:
13 7 0.37
14 12 0.63
ACGTcount: A:0.46, C:0.09, G:0.17, T:0.29
Consensus pattern (13 bp):
AAATCAAGTTAGT
Found at i:38063299 original size:23 final size:23
Alignment explanation
Indices: 38063258--38063301 Score: 61
Period size: 23 Copynumber: 1.9 Consensus size: 23
38063248 CCCTAAACCA
*
38063258 TAAAAACCTTAACCCTAATAAAT
1 TAAAAACCCTAACCCTAATAAAT
* *
38063281 TAAAAACCCTAATCTTAATAA
1 TAAAAACCCTAACCCTAATAA
38063302 GTCTTGGTCA
Statistics
Matches: 18, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
23 18 1.00
ACGTcount: A:0.52, C:0.20, G:0.00, T:0.27
Consensus pattern (23 bp):
TAAAAACCCTAACCCTAATAAAT
Found at i:38063412 original size:23 final size:23
Alignment explanation
Indices: 38063379--38063436 Score: 89
Period size: 23 Copynumber: 2.5 Consensus size: 23
38063369 TTAAACCCCA
* *
38063379 AAAACCCTAACCTTAATAAATTT
1 AAAACCTTAACCCTAATAAATTT
38063402 AAAACCTTAACCCTAATAAATTT
1 AAAACCTTAACCCTAATAAATTT
38063425 AAAACCCTTAAC
1 AAAA-CCTTAAC
38063437 TCTGGAGAGA
Statistics
Matches: 32, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
23 25 0.78
24 7 0.22
ACGTcount: A:0.48, C:0.24, G:0.00, T:0.28
Consensus pattern (23 bp):
AAAACCTTAACCCTAATAAATTT
Found at i:38065817 original size:240 final size:240
Alignment explanation
Indices: 38065394--38065874 Score: 935
Period size: 240 Copynumber: 2.0 Consensus size: 240
38065384 CAATTCCCTT
*
38065394 CCAATCATGATAGTTAAGAAACCAGACATCTGTAATGTATATATGTAAGCATCAATCGTAAAGCT
1 CCAATCATGATAGTTAAGAAACCAGACATCTGTAATGTATATATGTAAGCATCAATCCTAAAGCT
* *
38065459 TCTATTGCACTAAGGCATATTGAAGTTCTTGCTTATTTATTTATTTTTTTATCATGAAATCAAAG
66 TCTATTGCACTAAAGCATATTGAAGTTCTTGCTTATTTATTTATTTATTTATCATGAAATCAAAG
38065524 TTCTAGTCTTAGTTTTCCTTAAGGATCACCTGATAAATGCTTTGAGAGAGTTGTTATGTCAGGAT
131 TTCTAGTCTTAGTTTTCCTTAAGGATCACCTGATAAATGCTTTGAGAGAGTTGTTATGTCAGGAT
38065589 TGCTTAGCATTCCATGACGACTACCACCAAGCATAAAAACTTCTC
196 TGCTTAGCATTCCATGACGACTACCACCAAGCATAAAAACTTCTC
38065634 CCAATCATGATAGTTAAGAAACCAGACATCTGTAATGTATATATGTAAGCATCAATCCTAAAGCT
1 CCAATCATGATAGTTAAGAAACCAGACATCTGTAATGTATATATGTAAGCATCAATCCTAAAGCT
38065699 TCTATTGCACTAAAGCATATTGAAGTTCTTGCTTATTTATTTATTTATTTATCATGAAATCAAAG
66 TCTATTGCACTAAAGCATATTGAAGTTCTTGCTTATTTATTTATTTATTTATCATGAAATCAAAG
38065764 TTCTAGTCTTAGTTTTCCTTAAGGATCACCTGATAAATGCTTTGAGAGAGTTGTTATGTCAGGAT
131 TTCTAGTCTTAGTTTTCCTTAAGGATCACCTGATAAATGCTTTGAGAGAGTTGTTATGTCAGGAT
38065829 TGCTTAGCATTCCATGACGACTACCACCAAGCATAAAAACTTCTC
196 TGCTTAGCATTCCATGACGACTACCACCAAGCATAAAAACTTCTC
38065874 C
1 C
38065875 ATTATCTGTA
Statistics
Matches: 238, Mismatches: 3, Indels: 0
0.99 0.01 0.00
Matches are distributed among these distances:
240 238 1.00
ACGTcount: A:0.32, C:0.18, G:0.15, T:0.35
Consensus pattern (240 bp):
CCAATCATGATAGTTAAGAAACCAGACATCTGTAATGTATATATGTAAGCATCAATCCTAAAGCT
TCTATTGCACTAAAGCATATTGAAGTTCTTGCTTATTTATTTATTTATTTATCATGAAATCAAAG
TTCTAGTCTTAGTTTTCCTTAAGGATCACCTGATAAATGCTTTGAGAGAGTTGTTATGTCAGGAT
TGCTTAGCATTCCATGACGACTACCACCAAGCATAAAAACTTCTC
Found at i:38069014 original size:31 final size:31
Alignment explanation
Indices: 38068915--38069076 Score: 109
Period size: 31 Copynumber: 5.4 Consensus size: 31
38068905 TTAATATAAC
* * ** *
38068915 ATTTGGTACTTGAACTCGACATTTTTTTTTG
1 ATTTGGTACCTGAACTTGACATTTTTTCCTA
* **
38068946 ATTTGGTACCTAAACTT----TTTTTGACTCA
1 ATTTGGTACCTGAACTTGACATTTTTTCCT-A
38068974 ATTTGGTACCTGAACTTGACATTTTTTCCTA
1 ATTTGGTACCTGAACTTGACATTTTTTCCTA
* * *** *****
38069005 ATTTAGTACCTAAACTTTTTA-AAGGACCTA
1 ATTTGGTACCTGAACTTGACATTTTTTCCTA
*
38069035 ATTTGATACCTGAACTTGACATTTTTTCCTA
1 ATTTGGTACCTGAACTTGACATTTTTTCCTA
38069066 ATTTGGTACCT
1 ATTTGGTACCT
38069077 AATCTTTTTT
Statistics
Matches: 93, Mismatches: 32, Indels: 12
0.68 0.23 0.09
Matches are distributed among these distances:
27 6 0.06
28 16 0.17
30 19 0.20
31 45 0.48
32 7 0.08
ACGTcount: A:0.25, C:0.17, G:0.12, T:0.45
Consensus pattern (31 bp):
ATTTGGTACCTGAACTTGACATTTTTTCCTA
Found at i:38069014 original size:59 final size:59
Alignment explanation
Indices: 38068915--38069087 Score: 222
Period size: 61 Copynumber: 2.9 Consensus size: 59
38068905 TTAATATAAC
* * ** *
38068915 ATTTGGTACTTGAACTCGACATTTTTTTTTGATTTGGTACCTAAACTTTTTTTGA-CTCA
1 ATTTGGTACCTGAACTTGACATTTTTTCCTAATTTGGTACCTAAACTTTTTTTGACCT-A
* **
38068974 ATTTGGTACCTGAACTTGACATTTTTTCCTAATTTAGTACCTAAACTTTTTAAAGGACCTA
1 ATTTGGTACCTGAACTTGACATTTTTTCCTAATTTGGTACCTAAACTTTTT--TTGACCTA
* *
38069035 ATTTGATACCTGAACTTGACATTTTTTCCTAATTTGGTACCTAATCTTTTTTT
1 ATTTGGTACCTGAACTTGACATTTTTTCCTAATTTGGTACCTAAACTTTTTTT
38069088 AAATTAAATT
Statistics
Matches: 98, Mismatches: 13, Indels: 6
0.84 0.11 0.05
Matches are distributed among these distances:
59 45 0.46
61 51 0.52
62 2 0.02
ACGTcount: A:0.25, C:0.17, G:0.12, T:0.47
Consensus pattern (59 bp):
ATTTGGTACCTGAACTTGACATTTTTTCCTAATTTGGTACCTAAACTTTTTTTGACCTA
Found at i:38072494 original size:31 final size:31
Alignment explanation
Indices: 38072456--38072589 Score: 111
Period size: 31 Copynumber: 4.5 Consensus size: 31
38072446 TATTAAAAAA
38072456 TTAGGTACCAAATTAGGAAAAAGAGTCAAGT
1 TTAGGTACCAAATTAGGAAAAAGAGTCAAGT
**
38072487 TTAGGTACCAAATT-GGACCCCAA-A---AAGT
1 TTAGGTACCAAATTAGGA--AAAAGAGTCAAGT
* * * * *
38072515 TTAAGTACCAACTTA-AAAAAAGTGTTAAGT
1 TTAGGTACCAAATTAGGAAAAAGAGTCAAGT
* *
38072545 TTAGGTACTAAATTAGGAAAAAGTGTCAAGT
1 TTAGGTACCAAATTAGGAAAAAGAGTCAAGT
38072576 TT-GAGTACCAAATT
1 TTAG-GTACCAAATT
38072590 GGACCAAAAA
Statistics
Matches: 80, Mismatches: 14, Indels: 18
0.71 0.12 0.16
Matches are distributed among these distances:
26 2 0.03
28 17 0.21
30 20 0.25
31 39 0.49
32 2 0.03
ACGTcount: A:0.43, C:0.12, G:0.19, T:0.27
Consensus pattern (31 bp):
TTAGGTACCAAATTAGGAAAAAGAGTCAAGT
Found at i:38072634 original size:89 final size:88
Alignment explanation
Indices: 38072456--38072646 Score: 233
Period size: 89 Copynumber: 2.1 Consensus size: 88
38072446 TATTAAAAAA
**
38072456 TTAGGTACCAAATTAGGAAAAAGAGTCAAGTTTAGGTACCAAATTGGACCCCAAAAAGTTTAAGT
1 TTAGGTACCAAATTAGGAAAAAGAGTCAAGTTTAGGTACCAAATTGGACCAAAAAAAGTTTAAGT
* *
38072521 ACCAACTTAAAAAAAGTGTTAAGT
66 ACCAAATTAAAAAAAG-GTCAAGT
* *
38072545 TTAGGTACTAAATTAGGAAAAAGTGTCAAGTTT-GAGTACCAAATTGGACCAAAAAAAAAGTTTA
1 TTAGGTACCAAATTAGGAAAAAGAGTCAAGTTTAG-GTACCAAATTGGACC--AAAAAAAGTTTA
** *
38072609 AGTATTAAATTAAAAGAA-GTCAAGT
63 AGTACCAAATTAAAAAAAGGTCAAGT
* *
38072634 TCAAGTACCAAAT
1 TTAGGTACCAAAT
38072647 GTTATATTAA
Statistics
Matches: 87, Mismatches: 12, Indels: 6
0.83 0.11 0.06
Matches are distributed among these distances:
88 1 0.01
89 62 0.71
91 24 0.28
ACGTcount: A:0.46, C:0.12, G:0.17, T:0.26
Consensus pattern (88 bp):
TTAGGTACCAAATTAGGAAAAAGAGTCAAGTTTAGGTACCAAATTGGACCAAAAAAAGTTTAAGT
ACCAAATTAAAAAAAGGTCAAGT
Found at i:38076019 original size:16 final size:16
Alignment explanation
Indices: 38075998--38076028 Score: 53
Period size: 16 Copynumber: 1.9 Consensus size: 16
38075988 ATAATGTGAA
38075998 AATAAAGATAAAATGT
1 AATAAAGATAAAATGT
*
38076014 AATAAAGGTAAAATG
1 AATAAAGATAAAATG
38076029 GGATCCACAA
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
16 14 1.00
ACGTcount: A:0.61, C:0.00, G:0.16, T:0.23
Consensus pattern (16 bp):
AATAAAGATAAAATGT
Found at i:38076882 original size:26 final size:26
Alignment explanation
Indices: 38076821--38076870 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
38076811 AATCCTGGGC
*
38076821 ACAATTCTGGACATGTTTATGCAGCA
1 ACAATTCTGGACATGTTCATGCAGCA
38076847 ACAATTCTGGACATGTTCATGCAG
1 ACAATTCTGGACATGTTCATGCAG
38076871 TGACATTTCT
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.20, G:0.20, T:0.30
Consensus pattern (26 bp):
ACAATTCTGGACATGTTCATGCAGCA
Found at i:38076906 original size:37 final size:38
Alignment explanation
Indices: 38076865--38076952 Score: 117
Period size: 38 Copynumber: 2.3 Consensus size: 38
38076855 GGACATGTTC
*
38076865 ATGCAGTGACA-TTTCTGGGTGCAA-TTGAAGAATACTT
1 ATGCAGTGACAGTTT-TGGATGCAATTTGAAGAATACTT
* * *
38076902 ATGCAGCGATAGTTTTGGATGCAATTTGAAGAATATTT
1 ATGCAGTGACAGTTTTGGATGCAATTTGAAGAATACTT
38076940 ATGCAGTGACAGT
1 ATGCAGTGACAGT
38076953 CTTAGGTGCA
Statistics
Matches: 43, Mismatches: 6, Indels: 3
0.83 0.12 0.06
Matches are distributed among these distances:
37 17 0.40
38 26 0.60
ACGTcount: A:0.31, C:0.11, G:0.25, T:0.33
Consensus pattern (38 bp):
ATGCAGTGACAGTTTTGGATGCAATTTGAAGAATACTT
Found at i:38078116 original size:17 final size:17
Alignment explanation
Indices: 38078077--38078125 Score: 53
Period size: 17 Copynumber: 2.9 Consensus size: 17
38078067 ATATATATGG
*
38078077 AAATGCAATGACAATAT
1 AAATGCAATGACAATAA
* * *
38078094 AGATGCAGTGATAATAA
1 AAATGCAATGACAATAA
*
38078111 AAATGCAAGGACAAT
1 AAATGCAATGACAAT
38078126 TATACTACAG
Statistics
Matches: 24, Mismatches: 8, Indels: 0
0.75 0.25 0.00
Matches are distributed among these distances:
17 24 1.00
ACGTcount: A:0.51, C:0.10, G:0.18, T:0.20
Consensus pattern (17 bp):
AAATGCAATGACAATAA
Found at i:38081165 original size:26 final size:26
Alignment explanation
Indices: 38081129--38081179 Score: 66
Period size: 26 Copynumber: 2.0 Consensus size: 26
38081119 TCCTGGGCGC
* * *
38081129 AATTCTGGACACGTTTATGCAGCGAT
1 AATTCTAGACACGATCATGCAGCGAT
*
38081155 AATTCTAGACATGATCATGCAGCGA
1 AATTCTAGACACGATCATGCAGCGA
38081180 CATTCCTGGG
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.31, C:0.20, G:0.22, T:0.27
Consensus pattern (26 bp):
AATTCTAGACACGATCATGCAGCGAT
Found at i:38081337 original size:36 final size:35
Alignment explanation
Indices: 38081284--38081365 Score: 101
Period size: 35 Copynumber: 2.3 Consensus size: 35
38081274 TAAATATTCT
*
38081284 TGCAGCGACAGTTTTTGGTACAATCTAGAAGTGCTCA
1 TGCAGCGACA-ATTTTGG-ACAATCTAGAAGTGCTCA
* * * *
38081321 TGCGGCGACAATTTTGGGCACTGTAGAAGTGCTCA
1 TGCAGCGACAATTTTGGACAATCTAGAAGTGCTCA
38081356 TGCAGCGACA
1 TGCAGCGACA
38081366 TTAGTAGTAA
Statistics
Matches: 39, Mismatches: 6, Indels: 2
0.83 0.13 0.04
Matches are distributed among these distances:
35 24 0.62
36 6 0.15
37 9 0.23
ACGTcount: A:0.26, C:0.21, G:0.28, T:0.26
Consensus pattern (35 bp):
TGCAGCGACAATTTTGGACAATCTAGAAGTGCTCA
Found at i:38082067 original size:40 final size:40
Alignment explanation
Indices: 38082023--38082109 Score: 111
Period size: 40 Copynumber: 2.2 Consensus size: 40
38082013 GTATATATAA
* * *
38082023 TGTCACTGCTAGTTCAATTGTAATCTTGCAGTATTTACAG
1 TGTCACTGCTAGTTCAATTATAATCCTGCAATATTTACAG
* * * *
38082063 TGTCATTGTTAGTTCAGTTATAATCCTGCAATGTTTACAG
1 TGTCACTGCTAGTTCAATTATAATCCTGCAATATTTACAG
38082103 TGTCACT
1 TGTCACT
38082110 ACCAATTCAG
Statistics
Matches: 39, Mismatches: 8, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
40 39 1.00
ACGTcount: A:0.24, C:0.17, G:0.17, T:0.41
Consensus pattern (40 bp):
TGTCACTGCTAGTTCAATTATAATCCTGCAATATTTACAG
Found at i:38082638 original size:56 final size:56
Alignment explanation
Indices: 38082562--38082713 Score: 187
Period size: 56 Copynumber: 2.7 Consensus size: 56
38082552 CCTTAAATCA
* * * **
38082562 CAAAATAGTATGCACGCACGGTCTGACACACGCTCGTGTGGCCAGCTTGTGTGCCC
1 CAAAACAGTATACACACACGGTCTGACACACGCTCGTGTGGCCAGCCCGTGTGCCC
* *
38082618 CAAAACAGTATACGCACACGGTCTGACACACGCTCGTGTGGCTAGCCCGTGTGCCC
1 CAAAACAGTATACACACACGGTCTGACACACGCTCGTGTGGCCAGCCCGTGTGCCC
* * * * * *
38082674 TAAAACTGTATACACACATGGTTTGACACAAGCTCATGTG
1 CAAAACAGTATACACACACGGTCTGACACACGCTCGTGTG
38082714 TCCCTTGAAA
Statistics
Matches: 82, Mismatches: 14, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
56 82 1.00
ACGTcount: A:0.26, C:0.29, G:0.24, T:0.22
Consensus pattern (56 bp):
CAAAACAGTATACACACACGGTCTGACACACGCTCGTGTGGCCAGCCCGTGTGCCC
Found at i:38083445 original size:21 final size:21
Alignment explanation
Indices: 38083419--38083468 Score: 68
Period size: 21 Copynumber: 2.4 Consensus size: 21
38083409 TGCTAGCTCC
38083419 ACCGATACAAGT-ATG-ATTTCT
1 ACCGATACAAGTCATGCA--TCT
38083440 ACCGATACAAGTCATGCATCT
1 ACCGATACAAGTCATGCATCT
38083461 ACCGATAC
1 ACCGATAC
38083469 CAAAAACTCA
Statistics
Matches: 27, Mismatches: 0, Indels: 4
0.87 0.00 0.13
Matches are distributed among these distances:
21 23 0.85
22 3 0.11
23 1 0.04
ACGTcount: A:0.34, C:0.26, G:0.14, T:0.26
Consensus pattern (21 bp):
ACCGATACAAGTCATGCATCT
Found at i:38090261 original size:12 final size:12
Alignment explanation
Indices: 38090240--38090301 Score: 56
Period size: 12 Copynumber: 5.2 Consensus size: 12
38090230 TATTGTGGAG
*
38090240 GAGAAGGAAGAA
1 GAGAAAGAAGAA
38090252 GAGAAAGAAGAA
1 GAGAAAGAAGAA
*
38090264 -AAATAAGAAGAA
1 GAGA-AAGAAGAA
*
38090276 -AGAAAGGAAGAC
1 GAGAAA-GAAGAA
*
38090288 GAGAAAGAGGAA
1 GAGAAAGAAGAA
38090300 GA
1 GA
38090302 ATTTGTCGCA
Statistics
Matches: 41, Mismatches: 6, Indels: 6
0.77 0.11 0.11
Matches are distributed among these distances:
11 4 0.10
12 32 0.78
13 5 0.12
ACGTcount: A:0.63, C:0.02, G:0.34, T:0.02
Consensus pattern (12 bp):
GAGAAAGAAGAA
Found at i:38106889 original size:22 final size:21
Alignment explanation
Indices: 38106846--38106885 Score: 55
Period size: 21 Copynumber: 1.9 Consensus size: 21
38106836 TTATTAGTTT
*
38106846 ATTTGAAAAGTAAAGGTTCAA
1 ATTTGAAAAGTAAAGATTCAA
38106867 ATTTGAAAACGTAAA-ATTC
1 ATTTGAAAA-GTAAAGATTC
38106886 CAAACAATTT
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
21 12 0.71
22 5 0.29
ACGTcount: A:0.47, C:0.07, G:0.15, T:0.30
Consensus pattern (21 bp):
ATTTGAAAAGTAAAGATTCAA
Found at i:38113574 original size:16 final size:16
Alignment explanation
Indices: 38113550--38113583 Score: 59
Period size: 16 Copynumber: 2.1 Consensus size: 16
38113540 CAAACCACAT
*
38113550 CTGCGACAATGAACAC
1 CTGCAACAATGAACAC
38113566 CTGCAACAATGAACAC
1 CTGCAACAATGAACAC
38113582 CT
1 CT
38113584 TTAACCATTA
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
16 17 1.00
ACGTcount: A:0.38, C:0.32, G:0.15, T:0.15
Consensus pattern (16 bp):
CTGCAACAATGAACAC
Found at i:38116927 original size:17 final size:17
Alignment explanation
Indices: 38116901--38116933 Score: 57
Period size: 17 Copynumber: 1.9 Consensus size: 17
38116891 GTCACAGTGG
*
38116901 AGGAATAAAAAATGAAT
1 AGGAAGAAAAAATGAAT
38116918 AGGAAGAAAAAATGAA
1 AGGAAGAAAAAATGAA
38116934 AAAAAGTGAG
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
17 15 1.00
ACGTcount: A:0.67, C:0.00, G:0.21, T:0.12
Consensus pattern (17 bp):
AGGAAGAAAAAATGAAT
Found at i:38140800 original size:215 final size:214
Alignment explanation
Indices: 38140416--38141100 Score: 975
Period size: 215 Copynumber: 3.2 Consensus size: 214
38140406 ACTTTTTCTC
* * * * *
38140416 TTTGAATTAAAAACATATTTACGTGAGAATTGTTTCTGTCTTAGTTCTTGGCCAAACTTCCGAAA
1 TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTT-GGTCTTGGCCGAACTT-CGAAC
*
38140481 TTGTCAAACTTTTATGAGCTCTTTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCC
64 TTGTCAAACTTTTATGAGCTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCC
* *
38140546 TTCGAGCAATTTTTCGAACATTCCATGCTCGGAAAATCGCATCATTTGGTCCAAATAATTTGTCA
129 TTCGAGCAATTTTTCGAACATTCAATGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA
*
38140611 TTTTTTAATCAATTTTTTGTA
194 TTTTGTAATCAATTTTTTGTA
38140632 TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGGTCTTGGCCGAACTTCAGAAC
1 TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTT-GGTCTTGGCCGAACTTC-GAAC
* * *
38140697 TTGTCAAGCTTTTATGAG-T-TTTTCATAACTTCGGTTCCTTAAAGCATTCAAGACGATACATTC
64 TTGTCAAACTTTTATGAGCTCTTTT-ATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTC
* * * *
38140760 CTAT-GAGCAATTTTTCGAACATTCTATGGTC-GAGAAATCGCATAATTTGGTCCAAATAGTTCG
128 CT-TCGAGCAATTTTTCGAACATTCAATGCTCGGA-AAATCGCATCATTTGGTCCAAATAGTTTG
*
38140823 TCATTTTGTAAACAATTTTTTGTA
191 TCATTTTGTAATCAATTTTTTGTA
* * * *
38140847 TTTGAATTAAAAATTTATTTAAGTGAGAATTCTTTCTCTGTTGGTGCTTGGCCGAACTTTCGAAC
1 TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGT-CTTGGCCGAAC-TTCGAAC
* * * * *
38140912 TTGTCAAACTATTATGAGCTCTTTTATAACTTCGGTTTCGTAAAGTATTCAAGATGATCCAGTCC
64 TTGTCAAACTTTTATGAGCTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCC
* * *
38140977 TTCGAGCAATTTTCCGAACATTCAATACTTGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA
129 TTCGAGCAATTTTTCGAACATTCAATGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA
*
38141042 TTTTGTAATC-AGTTTTTGTA
194 TTTTGTAATCAATTTTTTGTA
*
38141062 TTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT
1 TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT
38141101 TCTGGTATTT
Statistics
Matches: 417, Mismatches: 42, Indels: 21
0.87 0.09 0.04
Matches are distributed among these distances:
214 9 0.02
215 227 0.54
216 175 0.42
217 6 0.01
ACGTcount: A:0.28, C:0.17, G:0.15, T:0.40
Consensus pattern (214 bp):
TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTCTTGGCCGAACTTCGAACTT
GTCAAACTTTTATGAGCTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTT
CGAGCAATTTTTCGAACATTCAATGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATT
TTGTAATCAATTTTTTGTA
Found at i:38141126 original size:46 final size:46
Alignment explanation
Indices: 38141059--38141190 Score: 221
Period size: 46 Copynumber: 2.9 Consensus size: 46
38141049 ATCAGTTTTT
38141059 GTATTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTG
1 GTATTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTG
38141105 GTATTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTG
1 GTATTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTG
* * *
38141151 GTATTTGAATTAAAAACTTCTTT-CATGGAGAATTGTTTCT
1 GTATTTAAATTAAAAACTTATTTACGT-GAGAATTGTTTCT
38141191 TTGTTGGTTT
Statistics
Matches: 82, Mismatches: 3, Indels: 2
0.94 0.03 0.02
Matches are distributed among these distances:
45 2 0.02
46 80 0.98
ACGTcount: A:0.30, C:0.11, G:0.14, T:0.45
Consensus pattern (46 bp):
GTATTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTG
Found at i:38141612 original size:523 final size:522
Alignment explanation
Indices: 38140629--38141623 Score: 1336
Period size: 523 Copynumber: 1.9 Consensus size: 522
38140619 TCAATTTTTT
38140629 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGGTCTTGGCCGAACTTCAG
1 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGGTCTTGGCCGAACTTCAG
* * * *
38140694 AACTTGTCAAGCTTTTATGAGTTTTTCATAACTTCGGTTCCTTAAAGCATTCAAGACGATACATT
66 AACTTATAAAACTTTTACGAGTTTTTCATAACTTCGGTTCCTTAAAGCATTCAAGACGATACATT
* * * * *
38140759 CCTATGAGCAATTTTTCGAACATTCTATGGTCGAGAAATCGCATAATTTGGTCCAAATAGTTCGT
131 CCTATGAGCAATTTTTCGAAAATTCTATGCTAGAGAAATCACATAATTTGATCCAAATAGTTCGT
* * * * **
38140824 CATTTTGTAAACAATTTTTTGTATTTGAATTAAAAATTTATTTAAGTGAGAATTCTTTCTCTGTT
196 CATTTTCTAAACAACTTTTGGTATTTGAATTAAAAACTTATTTAAGTGAGAATTCTTTCTCACTT
* * * * * *
38140889 GGTGCTTGGCCGAACTTTCGAACTTGTCAAACTATTATGAGCTCTTTTATAACTTCGGTTTCGTA
261 GGTGCTTGGCCGAACTTCCAAACTTGTCAAACTATTACGAGCTCTTTTACAACTTCGATTCCGTA
* * * *
38140954 AAGTATTCAAGATGATCCAGTCCTTCGAGCAATTTTCCGAACATTCAATACTTGGAAAATCGCAT
326 AAGTATTCAAGACGATCCAGTCCATCGAGCAATTTTCCGAACATTCAACACTCGGAAAATCGCAT
* * * *
38141019 CATTTGGTCCAAATAGTTTGTCATTTTGTAATCAGTTTTTGTATTTAAATTAAAAACTTATTTAC
391 CATTTGCTCCAAAAAGTTTGTCATTTTCTAAACAGTTTTTGTATTTAAATTAAAAACTTATTTAC
38141084 GTGAGAATTGTTTCTCTTCTGGTATTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC
456 GTGAGAATTGTTTCTCTTCTGGTATTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC
38141149 TG
521 TG
* * * * * *
38141151 GTATTTGAATTAAAAACTTCTTT-CATGGAGAATTGTTTCTTTGTTGGTTTTTGGCCGAACTTCC
1 GTATTTGAATTAAAAACTTATTTACGT-GAGAATTGTTTCTCTCTTGGGTCTTGGCCGAACTT-C
* * *
38141215 A-AACTTATAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCC
64 AGAACTTATAAAACTTTTACGAGTT-TTTCATAACTTCGGTTCCTTAAAGCATTCAAGACGATAC
* *
38141279 ATT-CTTTCGAGCAATTTTTCGAAAATTCCT-TGCTA-AGGAAATCACATTATTTGATCCAAATA
128 ATTCCTAT-GAGCAATTTTTCGAAAATT-CTATGCTAGA-GAAATCACATAATTTGATCCAAATA
* * * * *
38141341 GTTTGTCATTTTCTTAACAACTTTTGGTGTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTC
190 GTTCGTCATTTTCTAAACAACTTTTGGTATTTGAATTAAAAACTTATTTAAGTGAGAATTCTTTC
* * * *
38141406 TCACTTGGTTCTTGGCCGAACTTCCAAACTTGTC-AACTTTTACGAGTTCTTTTACAACTTTGAT
255 TCACTTGGTGCTTGGCCGAACTTCCAAACTTGTCAAACTATTACGAGCTCTTTTACAACTTCGAT
* * * * * * * * *
38141470 TCCTTAAAGTATTCAAGACGCTCCATTCCATCGAGTAGTTTTTCGAACATTCCACGCTCGGGAAA
320 TCCGTAAAGTATTCAAGACGATCCAGTCCATCGAGCAATTTTCCGAACATTCAACACTCGGAAAA
* * *
38141535 TTGCATCATTTGCTCCAAAAAGTTTGTCATTTTCTAAACAATTTTTTGTATTTGAATTAAAAACT
385 TCGCATCATTTGCTCCAAAAAGTTTGTCATTTTCTAAAC-AGTTTTTGTATTTAAATTAAAAACT
38141600 TATTTACGTGAGAATTGTTTCTCT
449 TATTTACGTGAGAATTGTTTCTCT
38141624 CTTGGTTTTT
Statistics
Matches: 405, Mismatches: 61, Indels: 13
0.85 0.13 0.03
Matches are distributed among these distances:
521 2 0.00
522 185 0.46
523 216 0.53
524 2 0.00
ACGTcount: A:0.28, C:0.16, G:0.15, T:0.41
Consensus pattern (522 bp):
GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGGTCTTGGCCGAACTTCAG
AACTTATAAAACTTTTACGAGTTTTTCATAACTTCGGTTCCTTAAAGCATTCAAGACGATACATT
CCTATGAGCAATTTTTCGAAAATTCTATGCTAGAGAAATCACATAATTTGATCCAAATAGTTCGT
CATTTTCTAAACAACTTTTGGTATTTGAATTAAAAACTTATTTAAGTGAGAATTCTTTCTCACTT
GGTGCTTGGCCGAACTTCCAAACTTGTCAAACTATTACGAGCTCTTTTACAACTTCGATTCCGTA
AAGTATTCAAGACGATCCAGTCCATCGAGCAATTTTCCGAACATTCAACACTCGGAAAATCGCAT
CATTTGCTCCAAAAAGTTTGTCATTTTCTAAACAGTTTTTGTATTTAAATTAAAAACTTATTTAC
GTGAGAATTGTTTCTCTTCTGGTATTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC
TG
Found at i:38141896 original size:217 final size:217
Alignment explanation
Indices: 38141151--38142310 Score: 1433
Period size: 216 Copynumber: 5.4 Consensus size: 217
38141141 TTCTCTTCTG
* * * * *
38141151 GTATTTGAATTAAAAACTTCTTT-CATGGAGAATTGTTTCTTTGTTGGTTTTTGGCCGAACTTCC
1 GTATTTGAATTAAAAACTTATTTACGT-GAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCC
* *
38141215 AAACTTATAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCA
65 AAACTTGTAAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCA
* * * * * *
38141280 TTCTTTCGAGCAATTTTTCGAAAATTCCTTGCT-AAGGAAATCACATTATTTGATCCAAATAGTT
130 TTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGA-GAAATCGCATTATTTGCTCCAAATAGTT
* *
38141344 TGTCATTTTCT-T-AACAACTTTTG
194 TGTCATTTT-TGTAAACAATTTTTT
* *
38141367 GTGTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCACTTGGTTCTTGGCCGAACTTCCA
1 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCA
* * * *
38141432 AACTTGT-CAACTTTTACGAGTTCTTTTACAACTTTGATTCCTTAAAGTATTCAAGACGCTCCAT
66 AACTTGTAAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * * * * *
38141496 TCCATCGAGTAGTTTTTCGAACATTCCACGCTCGGGAAATTGCATCATTTGCTCCAAAAAGTTTG
131 TCCTTCGAGCAATTTTTCGAACATTCCATGCTCGAGAAATCGCATTATTTGCTCCAAATAGTTTG
*
38141561 TCA-TTTTCTAAACAATTTTTT
196 TCATTTTTGTAAACAATTTTTT
* *
38141582 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTTTTGGTCGAACTTCCA
1 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCA
* * *
38141647 AACTTGTAAAACTTTTTCAAGTTTTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCAT
66 AACTTGTAAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCAT
* * * *
38141712 TCCTTC-ATGCAATTTTTTGAACATTCCGTGCTCGACAAATCGCATTATTTCCTCCAAATAGTTT
131 TCCTTCGA-GCAATTTTTCGAACATTCCATGCTCGAGAAATCGCATTATTTGCTCCAAATAGTTT
*
38141776 GTCATTTTTGTAAACATTTTTTT
195 GTCATTTTTGTAAACAATTTTTT
* * * * *
38141799 GTATTTGAATTAAAAACTTATTTAAGTGAGAATTCTTTCTCTGTTGGCTCTTGGCCGAACTTCCG
1 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCA
* * * * *
38141864 AACTTTTTAAACTTTTACGAGTTATTTTATAACTTTGGTTGCTTAAAGTATTCAAGACGGTCCAT
66 AACTTGTAAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCAT
* * * ** *
38141929 TCCTTCGAGCAATTTTCCAAAAATTCCATGCTTTAGAAATCGCATTATTTGGTCCAAATAGTTTG
131 TCCTTCGAGCAATTTTTCGAACATTCCATGCTCGAGAAATCGCATTATTTGCTCCAAATAGTTTG
* *
38141994 TGATTTTCTG--AACAACTTTTT
196 TCATTTT-TGTAAACAATTTTTT
* * * * * * **
38142015 GTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTTTGTCTTAGTTCTTGGCCAAACTTCTG
1 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCA
* * *
38142080 AACTTGTCAAACTTTTATGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCAT
66 AACTTGTAAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * ** * *
38142145 TCTTTCGAGCAATTTTTTGAACATACCATGCTTG-GAAAATCGCATCGTTTGGTCCAAATAATTT
131 TCCTTCGAGCAATTTTTCGAACATTCCATGCTCGAG-AAATCGCATTATTTGCTCCAAATAGTTT
*
38142209 GTCATTTTTGTAATCAATTTTTT
195 GTCATTTTTGTAAACAATTTTTT
* * *
38142232 GTATTTGAATTAAAAACTTATTTACGTGAGTATTGTTTCTCT-TCTGGTTCTTCGCCGAACTTTC
1 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCT-TGGTTCTTGGCCGAACTTCC
* *
38142296 GAACTTGTCAAACTT
65 AAACTTGTAAAACTT
38142311 GTCAATACTC
Statistics
Matches: 810, Mismatches: 121, Indels: 25
0.85 0.13 0.03
Matches are distributed among these distances:
213 1 0.00
214 4 0.00
215 186 0.23
216 347 0.43
217 269 0.33
218 3 0.00
ACGTcount: A:0.27, C:0.17, G:0.14, T:0.42
Consensus pattern (217 bp):
GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCA
AACTTGTAAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCAT
TCCTTCGAGCAATTTTTCGAACATTCCATGCTCGAGAAATCGCATTATTTGCTCCAAATAGTTTG
TCATTTTTGTAAACAATTTTTT
Found at i:38142086 original size:433 final size:429
Alignment explanation
Indices: 38141151--38142310 Score: 1504
Period size: 433 Copynumber: 2.7 Consensus size: 429
38141141 TTCTCTTCTG
* *
38141151 GTATTTGAATTAAAAACTTCTTTCATG-GAGAATTGTTTCTTTGTTGGTTTTTGGCCGAACTTCC
1 GTATTTGAATTAAAAACTTATTT-ATGTGAGAATTGTTT-TTTCTTGGTTTTTGGCCGAACTTCC
* *
38141215 AAACTTATAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCA
64 AAACTTGTAAAACTTTTTCGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCA
* * * * *
38141280 TTCTTTCGAGCAATTTTTCGAAAATTCCTTGCTAAGGAAATCACATTATTTGATCCAAATAGTTT
129 TTCTTTCGAGCAATTTTTTGAACATTCCATGCT--GAAAATCGCATTATTTGATCCAAATAGTTT
* * *
38141345 GTCATTTTCT-T-AACAACTTTTGGTGTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTC
192 GTCATTTT-TGTAAACAATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTC
* * * * *
38141408 ACTTGGTTCTTGGCCGAACTTCCAAAC-TTGTCAACTTTTACGAGTTCTTTTACAACTTTGATTC
256 -TTTGGTTCTTGGCCGAACTTCCGAACTTTTTAAACTTTTACGAGTTATTTTACAACTTTGATTC
* * * * * * *
38141472 CTTAAAGTATTCAAGACGCTCCATTCCATCGAGTAGTTTTTCGAACATTCCACGCTCGGGAAATT
320 CTTAAAGTATTCAAGACGCTCCATTCCATCGAGCAATTTTCCAAAAATTCCACGCTCGAGAAATC
*
38141537 GCATCATTTGCTCCAAAAAGTTTGTCATTTTCTAAACAATTTTTT
385 GCATCATTTGCTCCAAAAAGTTTGTCATTTTCTAAACAACTTTTT
* * *
38141582 GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTTTTGGTCGAACTTCCA
1 GTATTTGAATTAAAAACTTATTTATGTGAGAATTGTTT-TTTCTTGGTTTTTGGCCGAACTTCCA
* * *
38141647 AACTTGTAAAACTTTTTCAAGTTTTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCAT
65 AACTTGTAAAACTTTTTCGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCAT
* * **
38141712 TCCTTC-ATGCAATTTTTTGAACATTCCGTGCTCGACAAATCGCATTATTTCCTCCAAATAGTTT
130 TCTTTCGA-GCAATTTTTTGAACATTCCATGCT-GA-AAATCGCATTATTTGATCCAAATAGTTT
* * *
38141776 GTCATTTTTGTAAACATTTTTTTGTATTTGAATTAAAAACTTATTTAAGTGAGAATTCTTTCTCT
192 GTCATTTTTGTAAACAATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT
* * * *
38141841 GTTGGCTCTTGGCCGAACTTCCGAACTTTTTAAACTTTTACGAGTTATTTTATAACTTTGGTTGC
257 -TTGGTTCTTGGCCGAACTTCCGAACTTTTTAAACTTTTACGAGTTATTTTACAACTTTGATTCC
* * * **
38141906 TTAAAGTATTCAAGACGGTCCATTCCTTCGAGCAATTTTCCAAAAATTCCATGCTTTAGAAATCG
321 TTAAAGTATTCAAGACGCTCCATTCCATCGAGCAATTTTCCAAAAATTCCACGCTCGAGAAATCG
* * * * *
38141971 CATTATTTGGTCCAAATAGTTTGTGATTTTCTGAACAACTTTTT
386 CATCATTTGCTCCAAAAAGTTTGTCATTTTCTAAACAACTTTTT
* * * * **
38142015 GTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTTTGTCTTAGTTCTTGGCCAAACTTCTG
1 GTATTTGAATTAAAAACTTATTTATGTGAGAATTGTTTTT-TCTTGGTTTTTGGCCGAACTTCCA
*
38142080 AACTTGTCAAACTTTTAT-GAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCA
65 AACTTGTAAAACTTTT-TCGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCA
* ** * *
38142144 TTCTTTCGAGCAATTTTTTGAACATACCATGCTTGGAAAATCGCATCGTTTGGTCCAAATAATTT
129 TTCTTTCGAGCAATTTTTTGAACATTCCATGC-T-GAAAATCGCATTATTTGATCCAAATAGTTT
* *
38142209 GTCATTTTTGTAATCAATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGTATTGTTTCTCT
192 GTCATTTTTGTAAACAATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT
* * * *
38142274 TCTGGTTCTTCGCCGAACTTTCGAACTTGTCAAACTT
257 T-TGGTTCTTGGCCGAACTTCCGAACTTTTTAAACTT
38142311 GTCAATACTC
Statistics
Matches: 633, Mismatches: 84, Indels: 22
0.86 0.11 0.03
Matches are distributed among these distances:
430 5 0.01
431 177 0.28
432 71 0.11
433 375 0.59
434 5 0.01
ACGTcount: A:0.27, C:0.17, G:0.14, T:0.42
Consensus pattern (429 bp):
GTATTTGAATTAAAAACTTATTTATGTGAGAATTGTTTTTTCTTGGTTTTTGGCCGAACTTCCAA
ACTTGTAAAACTTTTTCGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATT
CTTTCGAGCAATTTTTTGAACATTCCATGCTGAAAATCGCATTATTTGATCCAAATAGTTTGTCA
TTTTTGTAAACAATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTTGG
TTCTTGGCCGAACTTCCGAACTTTTTAAACTTTTACGAGTTATTTTACAACTTTGATTCCTTAAA
GTATTCAAGACGCTCCATTCCATCGAGCAATTTTCCAAAAATTCCACGCTCGAGAAATCGCATCA
TTTGCTCCAAAAAGTTTGTCATTTTCTAAACAACTTTTT
Found at i:38142886 original size:216 final size:214
Alignment explanation
Indices: 38142322--38145071 Score: 2521
Period size: 216 Copynumber: 12.7 Consensus size: 214
38142312 TCAATACTCC
* ** * *
38142322 GGAAGTTGCATCATTTGCACCAAATAGTTTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ATTTGAATTAA
** * * * * *
38142387 AAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCTGAA-TTTCTGAACTT-TTCAAA
65 AAACTTATTTACGTGAGAATTGTTTCTCT-TTGGTTCTCGCCTGAACTTTC-GAACTTGTT-AAA
* * * * *
38142450 CTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAGC
127 CTTTTACGAG-TTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC
* *
38142515 AATTTTTTGAACATTTCATGCTCG
191 AATTTTTCGAACATTCCATGCTCG
** * ** * * ** * * * ** *
38142539 AAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCGTAAAAAAATAAGTT--TTTGAATTCA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACT-TTTTGATTTGAATTAA
* * * * *
38142602 AAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTG-GTCGAACTTTCGAACTTGTCAGAC
65 AAACTTATTTACGTGAGAATTGTTTCTCT-TTGGTTCTCGCCT-GAACTTTCGAACTTGTTAAAC
* * * *
38142666 TTTTACGATTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAATACGATCCATTTCTTCGAGAAA
128 TTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAA
* *
38142731 TTTTCCGAATATTCCATGCTCG
193 TTTTTCGAACATTCCATGCTCG
* * * *
38142753 GGAAATTGCATTATTTGGTTCAAATAGTTTGTCATTTTTTAAACAACTTTTTGACTTTCAATTAA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGA-TTTGAATTAA
* * *
38142818 AAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTCACCTGAACTTTCGAACTTGTTAAACT
65 AAACTTATTTACGTGAGAATTGTTTCTCTT-TGGTTCTCGCCTGAACTTTCGAACTTGTTAAACT
* * * *
38142883 TTTATGAATTC--TTA-AAGCTTTGGTTCCTTAAAGTATTCAAGACGATTCATTCCTTCGAGCAA
129 TTTACGAGTTCTTTTATAA-TTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAA
*
38142945 TTTTTCGAACATTCCGTGCTC-
193 TTTTTCGAACATTCCATGCTCG
** * * *
38142966 GGAGAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTA
1 GGA-AATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ATTTGAATTA
* * * * * * *
38143031 CAAACTTATTTACGAGAGAATTGTTTCCCTCTTGGTTCTTGGCC-GAACTTCCAAACTTGTCAAA
64 AAAACTTATTTACGTGAGAATTGTTTCTCT-TTGGTTC-TCGCCTGAACTTTCGAACTTGTTAAA
* * * *
38143095 CTTTTATGAGTTCTTTTATAACTTTGATTCCATAAAGTATTCAAGACGATCCATTCCTTCGAGCA
127 CTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCA
** * * *
38143160 ATTTTTTTAACATGCTATGCTTG
192 ATTTTTCGAACATTCCATGCTCG
* * * * *
38143183 GAAAATCGCATCATTTGGTCCAAAAAATTTGTCATTTTTGTAATA-AATTTTTTGTATTTGAATT
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA-ACAACTTTTTG-ATTTGAATT
* * * *
38143247 AAAAACTTATTTACGTGAGAATTGTTTCCCTTCTAGTTCTTCGTC-GAACTTTCGAACTTGTCAA
63 AAAAACTTATTTACGTGAGAATTGTTTCTCTT-TGGTTC-TCGCCTGAACTTTCGAACTTGTTAA
* * *** * * * * * *
38143311 GCTTTTATGAGTTCTTTTATAATTTCATTTCATTAATGAATTCAAGACGATCCGTTCCATCAAGC
126 ACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC
* ** * * *
38143376 AACTTACCAAACATTCAATACTCG
191 AATTTTTCGAACATTCCATGCTCG
* * ** * * * *
38143400 GGAGATAGCATCATTTGCACCAAATAGTTTGTCATTTTGTAAAGAACTTTTGGTACTTGAATGAA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ATTTGAATTAA
** * * * * *
38143465 AAACTTGCTCACATGAGAATCGTTTCTTTCTTGGTTCTTGGCC-GAAC-TTCTGAACTT-TTCAA
65 AAACTTATTTACGTGAGAATTGTTTCTCT-TTGGTTC-TCGCCTGAACTTTC-GAACTTGTT-AA
* * * * *
38143527 ACTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAG
126 ACTTTTACGAG-TTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAG
* *
38143592 CAATTTTTTGAACATTTCATGCTCG
190 CAATTTTTCGAACATTCCATGCTCG
** ** * ** * * * * *
38143617 AAAAATTGCATCATTTACTCCAAATAGTTTTTCAAATCGTAAAAAAATATGT-ATTTGAATTAAA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGATTTGAATTAAA
* * * * *
38143681 AAGTTATTTACGTGAGAATTCTTTCTCTATTGGCTCTTGGCTGAACTTTCGAACTT-TTCAAACT
66 AACTTATTTACGTGAGAATTGTTTCTCT-TTGGTTCTCGCCTGAACTTTCGAACTTGTT-AAACT
* * * *
38143745 TTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTACTCAAGATGATCCATTTCTTCGAGAAAT
129 TTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
*
38143810 TTTTCAAACATTCCATGCTCG
194 TTTTCGAACATTCCATGCTCG
* * * * * * *
38143831 GGAAATTACATTATTTGTTCCAAATAGTTTTTCATTTTGTAAACAACCTTTTGACTTTCAATTTA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGA-TTTGAATTAA
* * * * *
38143896 AAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTCACCCGAACTTCCGAACTTGTTAAACT
65 AAACTTATTTACGTGAGAATTGTTTCTCTT-TGGTTCTCGCCTGAACTTTCGAACTTGTTAAACT
* * *
38143961 TTTATGAGTTCTTTTATAACTTTGGTTCCATAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
129 TTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
**
38144026 TTTTCGAACATTCTGTGCTC-
194 TTTTCGAACATTCCATGCTCG
** * * * *
38144046 GGAGAATCACATCATTTGTTCCAACTAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTA
1 GGA-AATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ATTTGAATTA
* * * *
38144111 CAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCC-GAAC-TTCTAAACTTGTCAA
64 AAAACTTATTTACGTGAGAATTGTTTCTCT-TTGGTTC-TCGCCTGAACTTTC-GAACTTGTTAA
* * *
38144174 AGTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC
126 ACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC
* * * *
38144239 AATTTTTTGAACATACTATGCTTG
191 AATTTTTCGAACATTCCATGCTCG
* ** * * *
38144263 GAAAATAACATCATTTGGTCCAAATAATTTGTCATTTTTGTAATCAA-TTTTTCTATTTGAATTA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAAACAACTTTTT-GATTTGAATTA
* * *
38144327 AAAACTTATTTACGTGAGAATTGTTTCTCCTCTGGTTCTTCGCC-GAACTTTCGAACTTGTCAAG
64 AAAACTTATTTACGTGAGAATTGTTTCT-CTTTGGTTC-TCGCCTGAACTTTCGAACTTGTTAAA
* * * * * * *
38144391 CTTTTATGAGTTCTTTTATAATTTTGTTTCATTAATGTATTCAAGACGATCCGTTCCATCAAGCA
127 CTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCA
* ** * * *
38144456 ACTTACCAAACAATCAATGCTCG
192 ATTTTTCGAACATTCCATGCTCG
** * *
38144479 GGAAATTGCATCATTTGCACCAAATAGTTTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ATTTGAATTAA
** * * * *
38144544 AAACTTGCTCACATGAGAATTGTTTCT-TACTTGGTTCTTGGCTGAA-TTTCTGAACTT-TTCAA
65 AAACTTATTTACGTGAGAATTGTTTCTCT--TTGGTTCTCGCCTGAACTTTC-GAACTTGTT-AA
* * * * * *
38144606 ACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAAGCCGATCTATTCCTTCGA
126 ACTTTTACGAG--TTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* *
38144671 GCAATTTTTTGAACATTTCATGCTCG
189 GCAATTTTTCGAACATTCCATGCTCG
** ** * ** * *** * *
38144697 AAAAATTGCATCATTTACTCCAAATAGTTTTTCAAATCGTAAA-AAAAATATGTATTTGACTTAA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ATTTGAATTAA
* * *
38144761 AAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTGGCC-GAACTTTCGAACTTGTCAAAC
65 AAACTTATTTACGTGAGAATTGTTTCTCT-TTGGTTC-TCGCCTGAACTTTCGAACTTGTTAAAC
* * * *
38144825 TTTTACGATTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGATGATCCATTTCTTCGAGAAA
128 TTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAA
* *
38144890 TTTTCCGAACATTCCATGCTCA
193 TTTTTCGAACATTCCATGCTCG
* *
38144912 GGAAATTGCATTATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGACTTTCAATTAA
1 GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGA-TTTGAATTAA
* * * * * *
38144977 AAACTTATTTAAGTAAGAATTATTTCTCTTGTGGTTCTCCCCCGAACTTCCGAACTTGTTGTTAA
65 AAACTTATTTACGTGAGAATTGTTTCTCTT-TGGTTCTCGCCTGAACTTTCGAAC---TTGTTAA
* * *
38145042 ACCTTTATGAGTTCTTTTACAACTTTTGGT
126 ACTTTTACGAGTTCTTTTATAA-TTTTGGT
38145072 CTTTGAATTA
Statistics
Matches: 2045, Mismatches: 425, Indels: 123
0.79 0.16 0.05
Matches are distributed among these distances:
213 7 0.00
214 380 0.19
215 263 0.13
216 864 0.42
217 396 0.19
218 104 0.05
219 24 0.01
220 7 0.00
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (214 bp):
GGAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGATTTGAATTAAA
AACTTATTTACGTGAGAATTGTTTCTCTTTGGTTCTCGCCTGAACTTTCGAACTTGTTAAACTTT
TACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTT
TTCGAACATTCCATGCTCG
Found at i:38145751 original size:216 final size:214
Alignment explanation
Indices: 38145062--38170454 Score: 18314
Period size: 216 Copynumber: 117.1 Consensus size: 214
38145052 GTTCTTTTAC
* * * * **
38145062 AACTTTTGGTCTTTGAATTACAAACCTATTTACGAGAGAATTGTTTCCCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** *
38145127 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * *
38145192 TGATCCATTCCTTCGAGCAATTTTTTGAACATACTAAGCTTGGAAAATCGCATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* *
38145257 ATAATTTGTCATTTTTGTAATCA
194 ATAGTTTGTCA-TTTTGTAA-AA
** * *
38145280 ATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * *
38145344 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * * ** * * * **
38145407 GATGATCCGTTCCATCAAGCAAGTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38145472 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * *
38145495 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * *
38145560 AACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG--TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * **
38145625 GCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGAATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38145690 AAATAGTTTTTAAAATCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * *
38145713 AAAATATGTATTTG-ATTAAAAAGTTATTTACGTGAGAATTCTTTCTCTATTGGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
** * * ** *
38145777 ACTT-TCGAACTTGTCAGGCTTTTACGATTTCTTTTATAGTTTTGGTTCCTAAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * * * * *
38145841 TGATCCATTTCTTTGAGAAATTTTCCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTGCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38145906 ATAGTTTGTCATTTTGTAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * * * ***
38145927 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTCACC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * *
38145990 CGAACTTCCGAACTTGTTGTTAAACCTTTATGAG-TCTTTTATAACTTTGGTTCCTTAAAGTATT
63 CGAACTTCTGAAC---TTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATT
* * ** * * *
38146054 CAAGATGATTCATTCCTTCGAGCAATTTCCCGAACATTCCGTGCTCGTAGAAT-GACATCATTTG
125 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCG-CATCATTTG
* *
38146118 GTCCAACTAGTTTGTCATTTTGTAAAC
188 GTCCAAATAGTTTGTCATTTTGTAAAA
* * * ** *
38146145 AACTTTTGGTCTTTGAATTACAAACTTATTTACGAGAGAATTGTTTCCCTCTTGGTTCTTGCCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* ** * * *
38146210 AACTCCCAAACTTGTCAAACTTTTATAAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTTAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * *
38146275 TGATCCATTCCTTCGAGCAATTTTTTGAACATACTAAGCTTGGAAAATTGCATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* *
38146340 ATAATTTGTCATTTTTGTAATCA
194 ATAGTTTGTCA-TTTTGTAA-AA
** * * *
38146363 ATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38146427 AACTT-TCGAACTTGTCAAGCTTTTAAGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * * **
38146490 GACGATCCGTTCCATCAAGCAAGTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38146555 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * *
38146578 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * *
38146643 AACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG--TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * **
38146708 GCCGATCCATTCCTTCGACCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** * *
38146773 AAATAATTTTTCAAATCGAAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * * *
38146796 AAAATATGTATTTGAATTAAAAAGTTATTTACGTCAGAATTCTTTCTCTATTGGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* ** * * **
38146861 ACTT-TCGAACATGTCAGGCTTTTACGATTTCTTTTATAGTTTTGGTTCC-TAAGAGTATTCAAG
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAA-AGTATTCAAG
* * * * * *
38146924 ATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTC-GAGAAATTGGATTATTTGGTCC
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGA-AAATCGCATCATTTGGTCC
*
38146988 AAATAGTTTGTCATTTTGTAAAT
192 AAATAGTTTGTCATTTTGTAAAA
* * * * *
38147011 AACTGTTTG-ACTTTCAATTACAAACTTATTTATGAGAGAATTGTTTCTCTCTTGGTTCTTGGCC
1 AACT-TTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCC
** *
38147075 GAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAG
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * *
38147140 ACGATCCATTCCTTCGAGCAATTTTCCAAACATTCTGTGCTCGGAGAATCACATCATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
*
38147205 ACTAGTTTGTCATTTTGTAAACA
193 AATAGTTTGTCATTTTGTAAA-A
* * * *
38147228 ACCTTTTGTATTTGGATTAAAAACTTATTTACGTGAGTATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * *
38147292 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * * **
38147355 GACGATCCGTTCCATCAAGCAAGTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38147420 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * *
38147443 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * *
38147508 AACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAAG
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * * ** *
38147573 CCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTTGAAAAATCACATCATTTACTCAA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCCA
* ** *
38147638 AATAGTTTTTCAAATCGTAAAA
193 AATAGTTTGTCATTTTGTAAAA
** * * * * * * * *
38147660 AAAATATGTATTTCACTTAAAAAGTTATTTACGTGAGAATTCTTTCTCTATTGGCTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * * *
38147725 ACTT-TCGAACTTTTCAAACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAATACTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * ** * *
38147789 TGATCCATTTCTTCGAGAAATTTTTCAAACATTTCATGCTCGGGAAATTACATTATTTGTTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38147854 ATAGTTTTTCATTTTGTAAACA
194 ATAGTTTGTCATTTTGTAAA-A
* ** * * * * ***
38147876 ACCTTTTG-ACTTTTCATTTAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTCACCC
1 AACTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCC
* * * *
38147939 GAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCATAAAGTATTCAAG
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * *
38148004 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTGTGCTCAGAGAATCACATCATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
* *
38148069 ACTAGTTTGTCATTTTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * *
38148091 AACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * *
38148156 AACTTCTAAACTTGTCAAAGTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * ** *
38148221 CGATCCATTCCTTCGAGCAATTTTTTGAACATACTATGCTTGGAAAATAACATCATTTGGTTCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* **
38148286 ATAATTTGTCATTTTTGTAATC
194 ATAGTTTGTCA-TTTTGTAAAA
* * *
38148308 AATTTTTCTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * *
38148372 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * *
38148435 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAGTGCTCGGGAAATCGCATCATTT-GTAC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCA-TGCTCGGAAAATCGCATCATTTGGTCC
*
38148499 AGAATAGTTTGTCATTTTGTAAAC
192 A-AATAGTTTGTCATTTTGTAAAA
* ** * * * * *
38148523 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTACTGGGTTCTTGGCTG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * *
38148588 AATTTCTGAACTTTTCAAACTTTTATGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG--TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * * **
38148653 GCCGATCTATTCCTTCGAGAAATTTTTTGAACATTTCATGCTCGAAAAATTGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* ** *
38148718 AAATAGTTTTTCAAATCGTAAAAA
192 AAATAGTTTGTCATTTTGT-AAAA
** * * * * * *
38148742 AAAATATGTATTTGACTTAAAAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTGACCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * * *
38148807 ACTT-TCAAACTTGTCAAACTTTTACGATTTCTTTTATAATTTTGGTTCCTTAAAGTATACAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * *
38148871 TGATCCATTTCTTCGAGAAATTTTCCGAACATTCCATGCTCAGG-AAATTGCATTATTTGGTCCA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTC-GGAAAATCGCATCATTTGGTCCA
* * * *
38148935 AATAGCTTGTTATTTTTTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * * * ***
38148957 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTATTTCTCTT-GTGGTTCTCCCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * * * * *
38149020 CGAACTTCCGAACTTGTTGTTAAACCTTTATGAGTTCTTTTACAACTTTTGG-TCTTTGAA-T-T
63 CGAACTTCTGAAC---TTGTCAAACTTTTATGAGTTCTTTTATAA-ATTTGGTTCCTTAAAGTAT
* * * * * *** * * ** *
38149082 ACAA-AC---CTATT--TACGAGAGAATTGCTTCCCTCTTGGTTCTTGGC-C-GAACTTC-CA-A
124 TCAAGACGATCCATTCCTTCGAG-CAATT-TTTCGAAC---ATTCAT-GCTCGGAAAATCGCATC
* * * * *
38149137 ACTT-GT-CAAACT--TTTATGAGTTCTT-T-TAT
183 ATTTGGTCCAAA-TAGTTTGTCA-TT-TTGTAAAA
* * * * * * * * * * *
38149166 AACTTTGGT-TCCTTAAAGTATTCAAGA-TGATCCATTCCTTCGAGCAATTTTTTGAACATACTA
1 AACTTTTGTAT--TT---GAATTAAAAACTTAT---TTACGT-GAG-AATTGTTT---CTTTCTT
* ** * * * *
38149229 AG--CTT-G--GAAAATC-GCATCATTTGGTCCAAA-TAATT-TGTAATT-TTTGTAATCAATTT
53 GGTTCTTGGCCGAACTTCTG-A--ACTT-GT-CAAACT-TTTATG-AGTTCTTT-T-ATAAATTT
** * * * * *** *** * *
38149285 --TT--TGTATTTGAATTAAAAAC--T-TATTTAGGT-GAG-AATTGTTTCTCTTC-TGGTTATT
109 GGTTCCT-TA-AAGTATTCAAGACGATCCA-TTCCTTCGAGCAATT-TTTC-GAACAT--TCATG
* * ** * * * * * *
38149340 CGCCGAACTTTCG-A--ACTT-GT-CAAGCT--TTTATGAGTTCTTTTATAAT
167 CTCGGAA-AATCGCATCATTTGGTCCAA-ATAGTTTGTCA-TT-TTGTA-AAA
** * * * * * * * * * * *** **
38149386 TTCGTTT-CATTAATGTATTCAAGAC-GATCCGTTCCATCAAGCAA--GTTACCAAACATTCAAT
1 AACTTTTGTATT--TGAATTAAAAACTTAT---TTACGT-GAG-AATTGTT-TCTTTC-TT-GGT
* * * * * * * * *
38149447 ACTCGG--GAA-ATC-GCATCATT-TGCACCAAATAGTTTGTCA-TT-TTGTAAACAACTTTTGG
56 TCTTGGCCGAACTTCTG-AAC-TTGT-CA--AACT--TTTATGAGTTCTTTTATA-AA--TTTGG
* * * * * *** * *
38149505 TAT--TTGAA-TGA---AAAAC-TTGC--TCACAT-GAG-AATTGTTTCTTTCTTGGTTCTTGGC
111 T-TCCTTAAAGT-ATTCAAGACGATCCATTC-CTTCGAGCAATT-TTTCGAAC---ATTCAT-GC
** * *** * * *
38149559 -C-GAATTTCTG-AAC-TTT--T-CAAACT--TTTACGAGTTTTTTTTATA
168 TCGGAAAATC-GCATCATTTGGTCCAAA-TAGTTT--GTCATTTTGTAAAA
* * * * ** * * * ** *
38149601 AA-TTTGGT-TGCTTAAAGTATTAAAGCCGATCCATTCCTTCAAGCAATT-TTT-TGAACAT--T
1 AACTTTTGTAT--TTGAA-T-TAAAAACTTAT---TTACGT-GAG-AATTGTTTCT-TTCTTGGT
* ** * * * ** *** *
38149660 TCAT-GCTCGAAAAATC-GAATCATTTACTCCAAA-TAGTTTTTCAAATCGTAAAAAAAATATGT
56 TCTTGGC-CG-AACTTCTGAA-C--TT-GT-CAAACT--TTTATGAGTTC-TTTTATAAAT-T-T
** * ** *
38149722 ATTTCACTTAAAAAGTTATTTACGTGAGAATTCTTTCTCTATTGGCTCTT-G-GCCGAA-CTTTC
109 GGTTC-CTT--AAAG-TA-TT-C--AAG-A--CGATC-C-ATT--C-CTTCGAG-C-AATTTTTC
* ** *** ** ** * * *
38149784 GAACTTTTCAAACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTACTCAAGATGATCCA
156 GAAC-ATTCATGCTCGGA--AAATC--GCATCA-TTTGG-TCC--AAA-TAGT----TTG-T-CA
* *
38149849 TTTCT-TCGAGA
205 TTT-TGT-AAAA
* ** * ** * * *
38149860 AATTTTTCAAACATTCCATGCTCGGGAAATTACATTATTT--GTTCCA-AATAG-TT-TTTCATT
1 AACTTTT-GTA-TTTGAAT--T----AAA-AAC-TTATTTACG-T-GAGAATTGTTTCTTTC-TT
* *** * ** * * * * *
38149920 --TT-GTAAAC-AACCTTTTG-ACTT-TC-AA---TTAAAACTTATTTAAGTAAGAATTGTTTCT
53 GGTTCTTGGCCGAA-CTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTA-TAA-ATTTGGTTC-
*** * * * *** * * * *
38149975 CTTGTGGT-TCTCACCCGAAC-TTCCGA--ACTT-GTTAAACTTTTAT-GAGTTCTTTTATAACT
114 CTTAAAGTAT-TCA--AG-ACGATCC-ATTCCTTCGAGCAA-TTTT-TCGA--ACATTCAT-GC-
* * *** * * ** * * **
38150034 TTGGTTCCATAAA--GTATTCAAGAGATCC-ATTCCTTCGAGCAATTTT-TCGAA
168 TCGG----A-AAATCGCA-TCATTTGGTCCAAATAGTTTG-TC-ATTTTGTAAAA
* * ** * * * ** * *** * * * ***
38150085 CA-TTCTGTGCTCGGA-GAATCACATCATTT--GTTCCAACTAG-TT-TGTCATT--TT-GTAAA
1 AACTTTTGTATTTGAATTAAAAAC-TTATTTACGTGAGAA-TTGTTTCTTTC-TTGGTTCTTGGC
* ** * * *
38150141 C-AACTTTTGGTCTTTGAATTACAAACTTATATACGTGAGAATTGTTTCTCT---CTTGGTT-CT
63 CGAACTTCTGAAC-TTG---T-CAAACTT-T-TA--TGAG--TTCTTT-TATAAATTTGGTTCCT
*** * * * * ** * ** * **
38150201 TGGCCGAACTTCTAA-ACTTG-TCAAAGTT--TTATGAG--TTCTTTTATAACTTTGGTTC-CTT
116 T-AAAGTA-TTC-AAGAC--GATC-CA-TTCCTT-CGAGCAAT-TTTTCGAACATTCATGCTCGG
*** * ** * *
38150259 AAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTTGAACATACTATGCTTGGAAAA
172 AAA--A-TC--G-C-AT-CATTTGGTCCA--AATAGTTTG----T-C-AT-TTTGTAAAA
* * * * * ** * * * *
38150319 TAAC--AT-CATTTG-GTCCAAATAATTTGTCATTTTTGTAATCAATT-TTTCTAT-TTGAATT-
1 -AACTTTTGTATTTGAAT-TAAA-AA-CT-T-ATTTACGTGA-GAATTGTTTCTTTCTTG-GTTC
***** ** * * ** * * **** * * ** * *
38150377 AAAAACTTATTTACGTGAGAATTGT--TTCTCTTCTG-GTTCTTCGCCGAACTTTCGAACTTGTC
58 TTGGCCGAACTT-C-TGA-ACTTGTCAAACTTTTATGAGTTCTT-TTATAAATTTGGTTCCT-TA
* * * * * ** * * * * *
38150439 AAGCT-TTTATGA-GTTCTTTTATAATTTCGTTTC-ATTAATGTATTCAAGACGATCCGTTCCAT
118 AAG-TATTCAAGACGATC------CA-TTC-CTTCGAGCAAT-TTTTCGA-AC-ATTC-ATGC-T
* ** * * * * *
38150501 CAAGCAACTTAC-CAAACATTCAGTGATCGGGAAATCGCATCATTTGCACCCAATAGTTTGTCAT
169 C--GGAAAAT-CGC-ATCATT---TGGTC--CAAAT---A--GTTTG---TC-AT--TTTGT-A-
38150565 TTTGTAAA
212 -----AAA
* ** * * ** * *
38150573 CAACTTTTG-GTATTTGAATGAAAAACT-TGCT-CGCATGAGAATTGTTTCTTTCTTGGTTTTTG
1 -AACTTTTGTAT-TTGAATTAAAAACTTAT-TTACG--TGAGAATTGTTTCTTTCTTGGTTCTTG
* * * * * *
38150635 GCTGAATTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTACTTAAAGTAT
61 GCCGAACTTCTGAACTTGTCAAACTTTTATGAG--TTCTTTTATAAATTTGGTTCCTTAAAGTAT
* * * * ** *
38150700 TAAAGCCGATCCATTCCTTCGCA-CAATTTTTTGAACATTTCATGCCCAAAAAATCGCATCGTTT
124 TCAAGACGATCCATTCCTTCG-AGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTT
** ** *
38150764 ACTCCAAATAGTTT-TCAAATCGTAAAA
187 GGTCCAAATAGTTTGTCATTTTGTAAAA
*** ** * * * *
38150791 AAAAATTGTATTTGAATTAAAATGTTATTTATGTGAGAATTGTTTCTCTATTTGTTCTTGG-CGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * *
38150855 ACTT-TCAAACTTGTCAGACTTTTACT-ATTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAG
66 ACTTCT-GAACTTGTCAAACTTTTA-TGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * * * * ** *
38150918 ATGATCCATTTCTTCAAGAAATTTTCCAAACATTCCATGCTCGGGAAATTACATTATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
* *
38150983 AATAGTTTTTCATTTTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * * * *
38151005 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCCTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * * * * *
38151068 CGAACTACCGAACTTGTTAAACTTTTACGAGTTCTTTTATCACTTTGGTTTCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * ** * *
38151133 TACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTGTGCTAAGATAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38151198 AACTAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * * * *
38151221 AACTCTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGCCCG
1 AACT-TTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * *
38151286 AACTTCCGAACTTGTTAAACTTTTATGAGTTTTTTTATAACTTTGGTTTCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * *
38151351 TGATCCATTCTTTCGAGCAATTTTTCAAACATTCTGTGCTCGGAGAATCACATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* *
38151416 CTAGTTTGTCATTTTGTAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * *
38151437 AACTTTTGTTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTTG-TATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** * *
38151502 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTTAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
** * * * *
38151567 CGATCCATTCCTTCGAGCAATTTTTTTAACATACTAAGCTTGGAAAATCGCATCATTTGGTGCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38151632 ATAATTTGTCATTTTTGTAATAA
194 ATAGTTTGTCA-TTTTGTAA-AA
*** * *
38151655 TTTTTTTGTATTTGAATTAAAAACTTATTTACGTGACAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38151719 AACTT-TCGAACTTGTGAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * **
38151782 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATGCTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38151847 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * * * ***
38151870 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTCACC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * *
38151933 CGAACTTCCGAACTTGTTGTTAAACCTTTTATGAGTTCTTTTATAACTTTGGTTGCTTAAAGTAT
63 CGAACTTCTGAAC---TTGTCAAA-CTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTAT
* * * * *
38151998 TAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTA
124 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTG
* * * ** *
38152063 CTCCAAATAATTTTTCAAATCGTAAAA
188 GTCCAAATAGTTTGTCATTTTGTAAAA
* * * * * * *
38152090 AA-ATATGTATTTGAATTAAAAAGTTATTTACATGAGAATTGTTTCTCTATTGGTTCTTGGCCAA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * *
38152154 AATT-TCAAACTTGTCAGACTTTTACGAGTTCTTTTA-AAATTTTGGTTCCTTAAAGTATTCAAG
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAA-TTTGGTTCCTTAAAGTATTCAAG
* * * * * * *
38152217 ATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
*
38152282 AATAGTTTGTCATTTTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * * *
38152304 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
** * * *
38152367 CGAACTTCCAAACTTCTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * *
38152432 GACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGCTCGGAGAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38152497 AACTAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * *
38152520 AACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** *
38152585 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * *
38152650 CGATCCATTCCTTCCAGCAATTTTTTGAACATACTAAGCTTGGAAATTCGCATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38152715 ATAGTTTGTCATTTTTGTAATCA
194 ATAGTTTGTCA-TTTTGTAA-AA
** * * *
38152738 ATTTTTTGTATTTGGATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCT
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38152802 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTCT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * * * * ** * * * **
38152865 GATGATTCACTCCATCAAGTAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38152930 AAATAGTTTGTCATTTTGTACAC
192 AAATAGTTTGTCATTTTGTAAAA
* * ** * * *
38152953 AACTTTTAGTATTTGAATGAAAATCTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCTG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * *
38153018 AATTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG--TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * **
38153083 GCCGATCCATTCCTTCGACCAATTTTTTGAACATTTCATGCTCGAAAAATCACATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38153148 AAATAATTTTTCAAGTCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * *
38153171 AAAATATGTATTTGAATTAAAAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
** ** * ***
38153236 ACTT-TCGAACTTGTCAGGCTTTTACCATTTCTTTTATTGTTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * *
38153300 TGATCCATAT-CTTTGAGAAATTTTCCGAACATTCCATGCTCGGGAAATTGCATTATTTGGTCCA
130 CGATCCAT-TCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
*
38153364 AATAGTTTGTCATTTTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * * ***
38153386 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTCACC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * * *
38153449 CGAACTTCCGAACTTGTTGTTAAACCTTTATGAGTTCTTTTATAACTTTGGTTGCTTAAAGTATT
63 CGAACTTCTGAAC---TTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATT
* * * * **
38153514 AAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTAC
125 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGG
* * ** *
38153579 TCCAAATAATTTTTCAAATCGTAAAA
189 TCCAAATAGTTTGTCATTTTGTAAAA
** * * * * *
38153605 AAAATATGTATTTGAACTAAAAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
** ** ** * *
38153670 ACTT-TCGAACTTGTCAGGCTTTTACCA-TTCTTTTAT-TGTTTCGGTTCCTTAAGGGATTCAAG
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAAG
* * ** * * * * *
38153732 ATGATCCATTTCTTTAAG-AAATTTTCTGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCC
129 ACGATCCATTCCTTCGAGCAATTTTTC-GAACATT-CATGCTCGGAAAATCGCATCATTTGGTCC
*
38153796 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * * * *
38153819 AACTTTT-TGACTTTCAATT-AAAACTTATTTATGTAAGAATTGTTTCTCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
** * * *
38153881 CGAACTTCCAAACTTCTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * * *
38153946 GACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGCTCGGAGAATCACATCATTTGGTCT
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38154011 AACTAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * *
38154034 AACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** *
38154099 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * *
38154164 CGATCCATTCCTTCCAGCAACATTTT-GAACATACTAAGCTCGGAAAATCGCATCATTTGGTCCA
130 CGATCCATTCCTTCGAGCAA-TTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
*
38154228 AATAGTTTGTCATTTTTGTAATCA
193 AATAGTTTGTCA-TTTTGTAA-AA
** * * *
38154252 ATTTTTTGTATTTGAAATAAAAACTTATTTACGTGACAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38154316 AACTT-TCGAACTTGTGAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * **
38154379 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATGCTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38154444 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * * * ***
38154467 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTCACC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * *
38154530 CGAACTTCCGAACTTGTTGTTAAACCTTTTATGAGTTCTTTTATAACTTTGGTTGCTTAAAGTAT
63 CGAACTTCTGAAC---TTGTCAAA-CTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTAT
* * * * *
38154595 TAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTA
124 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTG
* * * ** *
38154660 CTCCAAATAATTTTTCAAATCGTAAAA
188 GTCCAAATAGTTTGTCATTTTGTAAAA
** * * * * * *
38154687 AAAATATGTATTTGAATTAAAAAGTTATTTACATGAGAATTGTTTCTCTATTGGTTCTTGGCCAA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * * * *
38154752 AATTTTGAACTTGTCAGACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGAT
66 ACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGAC
* * * * * * *
38154817 GATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCACA
131 GATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAAA
*
38154882 TAGTTTGTCATTTTGTAAAC
195 TAGTTTGTCATTTTGTAAAA
* * * * * *
38154902 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCCCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTT-CTTTCTTGGTTCTTGGC
* * * * *
38154965 CGAACTTCCGAACTTATTAAACTTTTATGAGTTCTTTTATAACTTTGGTACCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * ** * *
38155030 GACGATCCATTCATTCGAACAATTTTCCGAACATTTTGTGCTCGGAGAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * *
38155095 AACTAGTTTGTCATTTTGTATAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** *
38155118 AACTTTTGGTCTTTGAATTACTAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** *
38155183 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * *
38155248 CGATCCATTCCTTCCAGCAACATTTT-GAACATACTAAGCTCGGAAAATCGCATCATTTGGTCCA
130 CGATCCATTCCTTCGAGCAA-TTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
* *
38155312 AATAATTTGTCATTTTTGTAATCA
193 AATAGTTTGTCA-TTTTGTAA-AA
** * *
38155336 ATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38155400 AACTT-TCGAACTTGTCAAGCTTTTATTAGTTCTTTTAT-AATTTCGTCTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGT-TCCTTAAAGTATTCAA
* * * * * ** * * * **
38155463 GACGATCCGTCCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38155528 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * *
38155551 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * * *
38155616 AATTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAATTATTAAAG
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * **
38155681 CCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCCA
* * ** *
38155746 AATAATTTTTCAAATCGTAAAA
193 AATAGTTTGTCATTTTGTAAAA
** * * * *
38155768 AAAATATGTATTTGAATTAAAAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
** ** * ***
38155833 ACTT-TCGAACTTGTCAGGCTTTTACCATTTCTTTTATTGTTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * *
38155897 TGATCCATTTCTTCGAG-AAATTTTCGGAACATTCCATGCTCGGGAAATTGCATTATTTGGTCCA
130 CGATCCATTCCTTCGAGCAATTTTTC-GAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
* *
38155961 AATAGTTTGTCATTCTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * * *
38155983 AACTTTT-TGACTTTCAATTACAAACTTATTTACGAGAGAATTGTTTCTCTCTTGGTTCTTGGTC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCC
** * *
38156047 GAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAG
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * *
38156112 ACGATACATTCCTTCGAGCAATTTTTTGAACGTACTATGCTTGGAAAATCGCATCATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
* *
38156177 AATAATTTGTTATTTTTGTAATCAA
193 AATAGTTTGTCA-TTTTGTAA--AA
*** * * ** ** * *
38156202 TTTTTTTGTATTTGAAATAAAAACTTATTTAC--CA-AACTT-TCGAACTTGTCAAGCTT-TTAT
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAA-TTGT--TTCTT-TCTTGGTTCTT-G
* ** * * * * * * ** * * ** * * *
38156262 G-AGTTCTT-TTATAATT-TC--A-TTTCATTAATGTATTCAAGACGA-TCCGTTCCATCAAGCA
61 GCCGAACTTCTGA-ACTTGTCAAACTTTTATGAGT-TCTTTTATA-AATTTGGTTCCTTAAAG-T
* * * * * * * *
38156320 ACTTACCAA-AC-ATTCAATAC-TCG-GGAA---ATCGCATCATT--TGCAC--AAAATAG-ATT
122 A-TT--CAAGACGATCCATTCCTTCGAGCAATTTTTCG-AACATTCATGCTCGGAAAATCGCA--
* * *
38156373 GTCATTTTGT--AAAGAACTTTTGGT-A-TTTG-----
181 -TCATTTGGTCCAAA-TA-GTTT-GTCATTTTGTAAAA
** * * * *
38156402 -A-------A--TG----AAAAACTTGCTCACATGAGAATTGTTTCTTTCTAGGTTCTTGGCTGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * * * * * *
38156453 ATTTTTGAACTTTTCAAAATTTTACGAGTTTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAA
66 ACTTCTGAACTTGTCAAACTTTTATGAG---TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * **
38156518 GCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTTGAAAAATCGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38156583 AAATAATTTTTCAAATCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * *
38156606 AAAATATGTATTTGAATTAAAAA-TTATTTACGTGACAATTGTTTCTCTATTAGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * *
38156670 ACTT-TCGAACTTGTCAGACTTTTACGAGTTCTTGTATAATTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * *
38156734 TGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38156799 ATAGTTTGTCATTTTGTAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * * * *
38156820 AACTTTT-TGACTTTCAATTAAAAACTTATTTATGTAAGAATTGTTTCTCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
** * * *
38156883 CGAACTTCCAAACTTCTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * *
38156948 GACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGCTCGGAGAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* * * *
38157013 AACTAGTTTGTCAATTTGTATAC
192 AAATAGTTTGTCATTTTGTAAAA
* *
38157036 AACTTTT-TGACTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCC
** *
38157100 GAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAG
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* *
38157165 ACGATCCATTCCTTCGAGCAACTTTTT-GAACATACTAAGCTCGGAAAATCGCATCATTTGGTCC
129 ACGATCCATTCCTTCGAGCAA-TTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* * *
38157229 TAATAATTTGTCATTTTTGTAATCA
192 AAATAGTTTGTCA-TTTTGTAA-AA
** * *
38157254 ATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * *
38157318 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * * **
38157381 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38157446 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** *
38157469 AACTTTTGGTATTTGAATGAAAAACTTGCTCACAG-GAGAATTGTTTCTTTCTTGGTTCTTGGCC
1 AACTTTT-GTATTTGAATTAAAAACTTATTTAC-GTGAGAATTGTTTCTTTCTTGGTTCTTGGCC
* * * * * *
38157533 GAACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAGGTATTAAA
64 GAACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * **
38157598 GCCGATCCATTCCTTCGAGAAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38157663 AAATAATTTTTCAAATCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * * * *
38157686 AAAATATGTAATCGAATTAAAAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTGGCCAA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * *
38157751 AATT-TCAAACTTGTCAGACTTTTACGAGTTCTTTTA-AAATTTTGGTTCCTTAAAGTATTCAAG
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAA-TTTGGTTCCTTAAAGTATTCAAG
* * * * * * *
38157814 ATGATCCATTTCTTCGAGAAATTTTCCGAACATTCCATGCTCGGGAAATTGCATTATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
*
38157879 AATAGTTTGTCATTTTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * * * * *
38157901 AACTTTT-TGACATTCAATTACAAACTTATTTACGAGAGAATTGTTTCTCTCTTTGTTCTTGGCT
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCC
** *
38157965 GAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTA-AAACTTTGGTTCCTTAAGGTATTCAA
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAA-TTTGGTTCCTTAAAGTATTCAA
* * * *
38158029 GACGATCAATTCCTTCCAGCAAATTTTT-GAACATACTATGCTTGGAAAATCGCATCATTTGGTC
128 GACGATCCATTCCTTCGAGC-AATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTC
* *
38158093 CAAATAATTTGTCATTTTTGTAATCA
191 CAAATAGTTTGTCA-TTTTGTAA-AA
* * *
38158119 AA-TTTTTTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* ** * *
38158182 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCATTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * * ** *
38158245 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACA
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38158310 AAATAGATTGTCATTTTGTAAAG
192 AAATAGTTTGTCATTTTGTAAAA
* ** * * * *
38158333 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTAGGTTCTTGGCTG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * * * * *
38158398 AATTTTTGAACTTTTCAAAATTTTACGAGTTTTTTTTTTATAATTTGGTTGCTTAAAGTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATA-AATTTGGTTCCTTAAAGTATTCAA
* * * * **
38158463 GCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTTGAAAAATCGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38158528 AAATAATTTTTCAAATCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * *
38158551 AAAATATGTATTTGAATTAAAAA-TTATTTACGTGACAATTGTTTCTCTATTAGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * *
38158615 ACTT-TCGAACTTGTCAGACTTTTACGAGTTCTTGTATAATTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * *
38158679 TGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAA
38158744 ATAGTTTGTCATTTTGTAAACA
194 ATAGTTTGTCATTTTGTAAA-A
* * * * *
38158766 ACCTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTT-GCT
1 AACTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC-
* *
38158828 CGAACTTCTGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * ** * * * *
38158893 GATGATCCATTCTTTCGAATAATTTTTCGAACATTCTGTGCTTGGAGAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* * * *
38158958 AACTAGTTTGTCAATTTGTATAC
192 AAATAGTTTGTCATTTTGTAAAA
* * ** *
38158981 AACTTTTGGTCTTTCAATTACTAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** *
38159046 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * *
38159111 CGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGCTCGGAAAATCGCATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* *
38159176 AT-GATTTATCATTTTTGTAATCA
194 ATAG-TTTGTCA-TTTTGTAA-AA
** * *
38159199 ATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGCTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38159263 AACTT-TCGAACTTTTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAACGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * * *** * * * **
38159326 GACGATCCGTTCCATCAAGGAACTAACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38159391 AAATAGATTGTCATTTTGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
* ** * * * *
38159414 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTAGGTTCTTGGCTG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * *
38159479 AATTTCTGAACTTTTCAAAC-TTTATGAGTTTGTTTTTATAAATTTGGTTGCTTAAAGTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TT-CTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * **
38159543 GCCGGTCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38159608 AAATAATTTTTCAAATCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * * *
38159631 AAAATATGTATTTGAATTAAAAAGTTATTTACGTGAGAATTCTTTCTCTATTGGTTCTTGGCCAA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * * *
38159696 AATT-TCAAACTTGTCAGACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * * *
38159760 TGGTCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAA
* *
38159825 ATAGTTTGTCATTTTGGAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * * * *
38159846 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * * * * * *
38159909 CGAACTTCCGAACTTGTTAAACTTTTATAAGCTCTTTTACAACTTTTGTTCCTTAAAGTATTCAG
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * ** *
38159974 GACGATCCATTCTTTCGAGCAA-TTTTCTGAGCACTCTATGCTTGGAGGATCACATCATTTGGTC
128 GACGATCCATTCCTTCGAGCAATTTTTC-GAACATTC-ATGCTCGGAAAATCGCATCATTTGGTC
* *
38160038 CAACTAGTTTGTCATTTTGTAAAC
191 CAAATAGTTTGTCATTTTGTAAAA
* * *
38160062 AACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* ** * * *
38160127 AACCTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGTTTCCTTAAAGTATTCCAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * *
38160192 CGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGCTTGGAAAATCGCATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* *
38160257 ATAATTTGTCATTTTTGTAATCA
194 ATAGTTTGTCA-TTTTGTAA-AA
** * *
38160280 ATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * *
38160344 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * * **
38160407 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGAACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38160472 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * *
38160495 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * *
38160560 AACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTGTAAATTTGGTTGCTTAAAGTATTAAAG
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * **
38160625 CCGATCCATTCCTTCGAGCAATTTTTTGAA-TTTCATGCTCGAAAAATCGCATCATTTACTCCAA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTCATGCTCGGAAAATCGCATCATTTGGTCCAA
* * ** *
38160689 ATAATTTTTCAAATCGTAAAA
194 ATAGTTTGTCATTTTGTAAAA
** * * * * * * *
38160710 AAAATATGTATTTGAATTAAAAAGTTATTTACGTCAGAATTCTTTCTCTATTGGTTCTTGGCCTA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
** * * ** *
38160775 ACTT-TCGAACTTGTCAGGCTTTT-CGATTTCTTTTATAGTTTTGGTTCCTAAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * *
38160838 TGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTC-GAGAAATTGGATTATTTGGTCCA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGA-AAATCGCATCATTTGGTCCA
*
38160902 AATAGTTTGTCATTTTGTAAAT
193 AATAGTTTGTCATTTTGTAAAA
* * * *
38160924 AACTTTT-TGACTTTCAATTACAAACTTATTTACGAGAGAATTGTTTCTCTCTTGGTTCTTGGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCC
** *
38160988 GAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAG
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * *
38161053 ACGATCCATTCCTTCGAGCAATTTTCCAAACATTCTGTGCTCGGAGAATCACATCATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
*
38161118 ACTAGTTTGTCATTTTGTAAACA
193 AATAGTTTGTCATTTTGTAAA-A
* * * *
38161141 ACCTTTTGTATTTGGATTAAAAACTTATTTACGTGAGTATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* ** * *
38161205 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCATTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * * ** * * * * **
38161268 GACTATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTTGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* * *
38161333 CAATAGTTTATCATTTTGTAAAG
192 AAATAGTTTGTCATTTTGTAAAA
* ** ** * *
38161356 AACTTTTGGTATTTGAATGAAAAACTTGCTCGCATGAGAATTGTTTCTTTCTTGGTTCTTGGCTG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * * *
38161421 AATTTCTGAACTTTTCAAACTTTTACGAATTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAAG
65 AACTTCTGAACTTGTCAAACTTTTATG-AGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * **
38161486 CCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTC-AAAAATCGCATCGTTTACTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCCA
** **
38161550 AATAGTTT-TCAAATCATAAAAA
193 AATAGTTTGTCATTTTGT-AAAA
*** * * * * *
38161572 AAAAATT-TATTTGAATTAAAAAGTTATTTATGTGAGAATTGTTTCTCTATTTGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * *
38161636 ACTT-TCGAACTTGTCAGACTTTTACGATTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * ** *
38161700 TGATCCATTTCTTCAAG-AAATTTTCTGAACATTCCATGCTCGGGAAATTACATTATTTGGTCCA
130 CGATCCATTCCTTCGAGCAATTTTTC-GAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
*
38161764 AATAGTTTGTCATTTTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * * *
38161786 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * * * * *
38161849 CGAACTACCGAACTTGTTAAACTTTTACGAGTTCTTTTATCACTTTGGTTTCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * *
38161914 GACAATCCATTCCTTCGAGCAATTTTTCGAACATTCTGTGCTCGGATAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38161979 AACTAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * * * *
38162002 AACTCTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGCCCG
1 AACT-TTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * *
38162067 AACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTTCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * *
38162132 TGATCCATTCTTTCGAGCAATTTTTCAAACATTCTGTGCTCGGAGAATCACATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* *
38162197 CTAGTTTGTCATTTTGTAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * *
38162218 AACTTTTGTTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTTG-TATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** * *
38162283 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTTAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
** * * * *
38162348 CGATCCATTCCTTCGAGCAATTTTTTTAACATACTAAGCTTGGAAAATCGCATCATTTGGTGCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38162413 ATAATTTGTCATTTTTGTAATAA
194 ATAGTTTGTCA-TTTTGTAA-AA
*** * *
38162436 TTTTTTTGTATTTGAATTAAAAACTTATTTACGTGACAATTGTTTCTCTTC-TGGTTCTTTGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * * *
38162500 AACTT-TCAAACTTGTGAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * **
38162563 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATGCTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* * *
38162628 AAACAGATTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * * *
38162651 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAAAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * *
38162716 AACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAATTTGGTT-CTTAAAGTATTAAAG
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * * **
38162780 CCGATCCATTCCTTCGACCAATTTTTTGAACATTTCATGCTCGAAAAATCACATCATTTACTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCCA
* * ** *
38162845 AATAATTTTTCAAATCGTAAAA
193 AATAGTTTGTCATTTTGTAAAA
** * ** * * * *
38162867 AAAATATGTATTTGAATTAAAAAGATATTTACATGAGAATTGTTTCTCTATTGGTTCTTGGCCAA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * *
38162932 AATT-TCGAACTTGTCAGACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * **
38162996 TGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTATTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38163061 ATAGTTTGTCATTTTGTAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * * * **
38163082 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTTACC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * *
38163145 CGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * *
38163210 GACGATCCATTCTTTCGAACAATTTTTCGAACATTCTGTGCTCGGAGAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38163275 AACTAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * *
38163298 AACTTTTGGTCTTTGAATTGCAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCCTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* *
38163363 AACTTGC-AAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAG
65 AACTT-CTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * *
38163427 ACGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGCTTGGAAAATTGCATCATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
*
38163492 AATAGTTTGTCATTTTTGTAATCA
193 AATAGTTTGTCA-TTTTGTAA-AA
** * * *
38163516 ATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGTATTGTTTCTCTTC-TGGTTCTTCGTCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38163580 AACTT-TCGAACTTATCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * * ** * * * **
38163643 GATGATCCACTCCATCAAGCAACTTACCAAACATTCAATACTC-AAGAAATCGCATCATTTGCAC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGA-AAATCGCATCATTTGGTC
*
38163707 CAAATAGTTTGTCATTTTGTAAAC
191 CAAATAGTTTGTCATTTTGTAAAA
* ** * *
38163731 AACTTTTTGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AAC-TTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * *
38163796 AACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAATTATTAAAG
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * **
38163861 TCGATCCATTCCTTTGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCCA
* * ** *
38163926 AATAATTTTTCAAATCGTAAAA
193 AATAGTTTGTCATTTTGTAAAA
** * * * * * * *
38163948 AAAATATGTATTTGAATTAAAAAGTTATTTATGTGAGAATTGTTTCTCTATTGGTTCTTGTCCAA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
** ** * ***
38164013 ACTT-TCGAACTTGTCAGGCTTTTACCATTTCTTTTATTGTTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * *
38164077 TGATCCA-TCTCTTCGAGCAATTTTCCAAACATTCCATGGTCGGGAAATTGCATTATTTGGTCCA
130 CGATCCATTC-CTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
* *
38164141 AATAG-TTGTCATTTTGTGAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * *
38164162 AACTTTT-TGACTTTCAATTACAAACTTATTTACGAGAGAATTGTTTCTCTCTTGGTTCTTGGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCC
** * *
38164226 GAACTTCCAAACTTGTCAAACTTTTATGAGTTGTTTTATAACTTTGGTTCCTTAAAGTATTCAAG
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * *
38164291 ACGATCCATTCCTTCGAGCAATTTTTTGAACGTACTATGCTTGGAAAATCTCATCATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
* *
38164356 AATAATTTGTCATTTTTGTAATCA
193 AATAGTTTGTCA-TTTTGTAA-AA
** * * * *
38164380 ATTTTTTGTCTTTGAAATAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TAGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38164444 AACTT-TCGAACTTTTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * * **
38164507 AACGATCCATTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* ** *
38164572 AAACAAATTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * ** * * *
38164595 AACTTTTGGTGTTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCTG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * *
38164660 AATTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG--TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * **
38164725 GCCGATCCATTCCTTCGACCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38164790 AAATAATTTTTCAAATCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * *
38164813 AAAATATGTATTTGAATTAAAAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTGG-TGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG-
* * * *
38164877 AAATT-TCGAACTTGTCAGACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAG
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * * * *
38164941 ATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
*
38165006 AATAGTTTGTCATTTTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* * * * *
38165028 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * *
38165091 CGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * *
38165156 GATGATCCATTCTTTCGAGCAATTTTCCGAACATTCTGTGCTCGGAGAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38165221 AACTAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * * *
38165244 AACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTTGGTTCCTGGCC
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTC-TTGGTTCTTGGCC
** * *
38165309 GAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTCCCTTAAAGTATTCAAG
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * *
38165374 ACGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGCTTGGAAAATCGCATCATTTGGTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
*
38165439 AATAGTTTGTCATTTTTGTAATCA
193 AATAGTTTGTCA-TTTTGTAA-AA
** * * *
38165463 ATTTTTTGTATTTGGATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38165527 AACTT-TCGAACATGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * * ** * * * **
38165590 GATGATCCACTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38165655 AAATAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * *
38165678 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * * *
38165743 AACTTTTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAATTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG--TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * **
38165808 GTCGATCCATTCCTTTGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38165873 AAATAATTTTTCAAATCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * * *
38165896 AAAATATATATTTGAATTAAAAAGTTATTTACGTGACAATTGTTTCTCTATTGGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
** ** * * ***
38165961 ACTT-TCGAACTTGTCAGGCTTTTTTTACCATTTCCTTTATTGTTTTGGTTCCTTAAAGTATTCA
66 ACTTCT-GAACTTGTCAAAC---TTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCA
* ** * * * * * *
38166025 AGATGATCCATTTTTTCGAGAAATTTTCCGAACATTCCATGGTCGGGAAATTGCATTATTTGGTC
127 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTC
*
38166090 CAAATAGTTTGTCATTTTGTAAAC
191 CAAATAGTTTGTCATTTTGTAAAA
* * * * *
38166114 AACTTTT-TGACTTTCAATTACAAACTTATTTATGAGAGAATTGTTTCTCTCTTGGTTCTTGGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCC
* * *
38166178 GAACTTC-GAAACATGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAT
64 GAACTTCTG-AACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * *
38166242 GACGATCCATTCCTTCGAGAAATTTTTTGAACGTACTATGCTTGGAAAATCTCATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38166307 AAATAATTTGTCATTTTTGTAATCA
192 AAATAGTTTGTCA-TTTTGTAA-AA
** * * *
38166332 ATTTTTTGTCTTTGAAATAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38166396 AACTT-TCGAACTTTTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * ** * * * * **
38166459 AACGATCCATTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATTGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* ** *
38166524 AAACAAATTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* ** * * * *
38166547 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGACTG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * *
38166612 AATTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAAGTATTAAAG
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * ** **
38166677 CCGATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTCTAAAAATCGCATCATTTACTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCCA
* * ** *
38166742 AATAATTTTTCAAATCGTAAAA
193 AATAGTTTGTCATTTTGTAAAA
* * * * * *
38166764 AA-ATATGTATTTGAATTAAAAAGTTATTTACGTGAGAATTGTTTCTCTATTGGTTCTTGGCCAA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * ** * * *
38166828 AATT-TCGAACTTATCAGTCTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAAA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * *
38166892 TGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38166957 ATAGTTTGTCATTTTGTAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * * * *
38166978 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * *
38167041 CGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAA
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * * * *
38167106 AACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGCTCGGAGAATCACATCATTTAGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* *
38167171 AACTAGTTTGTCATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * * *
38167194 AACTTTTGGTCTTTCAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** *
38167259 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * *
38167324 TGATCCATTCCTTCGAGCAATTTTTTGAACATACTAAGCTTGGAAAATCGCATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* **
38167389 ATAATTTGTCATTTTTGTAATC
194 ATAGTTTGTCA-TTTTGTAAAA
* * * * * *
38167411 AATTTTTTTATTTGAATTCAAAACTTATTTAGGTGAGAATTGTTTCTCTTC-TGGTTCTTCGTCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * * *
38167475 AACTT-TCGAACTTTTCAAGCTTTTATGAGTTCTTTTATAATTTTGTTTCATTAATGTATTCAAG
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * ** * * * **
38167539 ACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCA
* *
38167604 AATAGTTTATCATTTTGTAAAC
193 AATAGTTTGTCATTTTGTAAAA
* ** * *
38167626 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * *
38167691 AACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAATTATTAAA
65 AACTTCTGAACTTGTCAAACTTTTATGAG--TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * **
38167756 GCCAATCCATTCCTTCGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCC
* * ** *
38167821 AAATAATTTTTCAAATCGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
** * * * * * * * *
38167844 AAAATATGTATTTGAATTAAAAAGTTATTTATGTGAGAATTCTATCTCTATTGGCTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * *
38167909 ACTT-TCGAACTTTTCAAACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTACTT-AAG
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTA-TTCAAG
* * * * ** * *
38167972 AAGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTACATTATTTGTTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCA
*
38168037 AATAGTTTTTCATTTTGTAAACA
193 AATAGTTTGTCATTTTGTAAA-A
* * * * * * *
38168060 ACCTTTTG-ACTTTCAATTTAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTTGCCC
1 AACTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCC
* * * * * *
38168123 GAACTTCCGAACTTGTTAAATTTTTATAAGTTCTTTTATAACTTTGGTTCCTTAAAGTATT-TAG
64 GAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * * *
38168187 AACGATCCATTCCTTCGACCAAATTTTCGAACATTCTGTGCTCGGAGAATCACAACATTTGGTCC
129 -ACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* * *
38168252 AACTAGTTTGTAATTTTGTAAAC
192 AAATAGTTTGTCATTTTGTAAAA
* * * *
38168275 AACTTTTGGTCTTTGAATTACAAACTTATTTGCGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** **
38168340 AACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAGCTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * *
38168405 CGATCCATTCCTTCGAGCAATTTTTTGAACATGCTACGCTTGGAAAATCGCATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* *
38168470 ATAATTTGTCATTTTTGTAATCA
194 ATAGTTTGTCA-TTTTGTAA-AA
** *
38168493 ATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTT-GTTCTTCGCCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * *
38168557 AACTT-TCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * * ** * * * * ** *
38168620 AACGATCCATTCCATCAAGGAACTTACCAAACATTCAGTACTCGGGAAATCACATCATTTGCACA
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCA-TGCTCGGAAAATCGCATCATTTGGTCC
* *
38168685 AAATAGATTGTCATTTTGTAAAG
192 AAATAGTTTGTCATTTTGTAAAA
* ** * * * **
38168708 AACTTTTGATATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTTAGTTCTTGGCTA
1 AACTTTTG-TATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * *
38168773 AATTTCTGAACTTTTCAAACTTTTACT-AGTTTTTATTTATAAATTTGGTTGCTTAAAGTATTAA
65 AACTTCTGAACTTGTCAAACTTTTA-TGAG-TTCT-TTTATAAATTTGGTTCCTTAAAGTATTCA
* * * * * **
38168837 AGCCGATCCATTCCTTCGACCAATTTTTTGAACATTTCATGCTCGAAAAATCACATCATTTACTC
127 AGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTC
* * ** *
38168902 CAAATAATTTTTCAAATCGTAAAA
191 CAAATAGTTTGTCATTTTGTAAAA
** * * * * * *
38168926 AAAATATGTATTTGAATTAAAAAGTTATTTACATGAGAATTGTTTCTCTATTAGTTCTTGGCCGA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * *
38168991 ACTT-TCGAACTTGTCAGACTTTTACGAGTTCTTGTATAATTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * *
38169055 TGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38169120 ATAGTTTGTCATTTTGTAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * * *
38169141 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTC--TCTTGCGGTTCTTGC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTT--GGTTCTTGG
* * * *
38169203 CCGAACTTTTGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCATAAAGTATTCA
62 CCGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCA
* * * * * *
38169268 AGACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGCTCGGAGAATCACATCATTTGGTC
127 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTC
* *
38169333 CAACTAGTTTGTCATTTTGTAAAC
191 CAAATAGTTTGTCATTTTGTAAAA
* * *
38169357 AACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCG
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
** * *
38169422 AACTTCCAAACTTGTCAAACTTTTATGTGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA
65 AACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * *
38169487 TGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGCTTGGAAAATCGCATCATTTGGTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCCAA
* **
38169552 ATAATTTGTCATTTTTGTAATC
194 ATAGTTTGTCA-TTTTGTAAAA
* * *
38169574 AATTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTCGTCG
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGCCG
* * * * *
38169638 AACTT-TCGAACTTTTCAAGCTTTTATGAGTTCTTTTAT-AATTTCGTTTCATTAATGTATTCAA
65 AACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTT-GGTTCCTTAAAGTATTCAA
* * * * * * *** * * * **
38169701 GACAATCCGTTCCATCAAGAAACTAACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
*
38169766 AAATAGATTGTCATTTTGTAAAA
192 AAATAGTTTGTCATTTTGTAAAA
* ** * * * * **
38169789 AACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCTTTCTAGGTTCTTAGCTA
1 AACTTTT-GTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCG
* * * * * *
38169854 AATTTTTGAACTTTTCAAAC-TTTATGAGTTTTTTTTATAAATTTTGTTCCTTAAAGTATTAAAG
65 AACTTCTGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAG
* * * * * **
38169918 CCGGTCCATGCCTTCGAGCAATTTTTTGAACATTTCATGCTCGAAAAATCGCATCATTTACTCCA
129 ACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCATGCTCGGAAAATCGCATCATTTGGTCCA
* * ** *
38169983 AATAATTTTTCAAATCGTAAAA
193 AATAGTTTGTCATTTTGTAAAA
** * * * * * *
38170005 AAAATATGTATTTGAATTAAAAAGTTATTTACGTGAGAATTCTTTCTCTATTGGTTCTTGGCCAA
1 AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
* * * * *
38170070 AATT-TCAAACTTGTCAGACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCAAGA
66 ACTTCT-GAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGA
* * * * * * * *
38170134 TGGTCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTCCAA
130 CGATCCATTCCTTCGAGCAATTTTTCGAACATT-CATGCTCGGAAAATCGCATCATTTGGTCCAA
*
38170199 ATAGTTTGTCATTTTGTAAAC
194 ATAGTTTGTCATTTTGTAAAA
* * * * *
38170220 AACTTTT-TGACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTT-GTGGTTCTTGCC
1 AACTTTTGT-A-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT-TTCTTGGTTCTTGGC
* * * * * * * *
38170283 CGAACTTCCGAACTTGTTAAACTTTTATAAGCTCTTTTACAACTTT-GTTCCTTAATGTATTCAG
63 CGAACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAA
* * * * * * * * *
38170347 GACGATCAATTCTTTTGAGCAATTTTCCGAACACTCTGTGCTTGGAGAATCACATCATTTGGTCC
128 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-ATGCTCGGAAAATCGCATCATTTGGTCC
* * *
38170412 AACTAGTTTGTCATTTTATAAAC
192 AAATAGTTTGTCATTTTGTAAAA
*
38170435 AACTTTTGGTCTTTGAATTA
1 AACTTTT-GTATTTGAATTA
38170455 CAAGATGATA
Statistics
Matches: 19752, Mismatches: 4448, Indels: 1953
0.76 0.17 0.07
Matches are distributed among these distances:
186 18 0.00
187 11 0.00
188 7 0.00
189 5 0.00
190 4 0.00
191 13 0.00
192 6 0.00
193 17 0.00
194 1 0.00
195 3 0.00
196 4 0.00
197 1 0.00
198 14 0.00
199 3 0.00
200 9 0.00
201 1 0.00
205 1 0.00
206 1 0.00
207 14 0.00
208 1 0.00
209 28 0.00
210 10 0.00
211 15 0.00
212 83 0.00
213 213 0.01
214 1032 0.05
215 2440 0.12
216 9172 0.46
217 4001 0.20
218 1499 0.08
219 385 0.02
220 239 0.01
221 21 0.00
222 2 0.00
223 6 0.00
224 14 0.00
225 19 0.00
226 18 0.00
227 9 0.00
228 8 0.00
230 6 0.00
231 11 0.00
232 12 0.00
233 10 0.00
234 19 0.00
235 15 0.00
236 9 0.00
237 17 0.00
238 8 0.00
239 15 0.00
240 20 0.00
241 21 0.00
242 18 0.00
243 15 0.00
244 8 0.00
245 6 0.00
246 9 0.00
247 21 0.00
248 19 0.00
249 8 0.00
250 3 0.00
252 12 0.00
253 9 0.00
254 26 0.00
255 16 0.00
256 17 0.00
257 8 0.00
258 8 0.00
259 7 0.00
260 8 0.00
261 13 0.00
263 3 0.00
264 2 0.00
265 2 0.00
266 1 0.00
267 2 0.00
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (214 bp):
AACTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTTGGCCGA
ACTTCTGAACTTGTCAAACTTTTATGAGTTCTTTTATAAATTTGGTTCCTTAAAGTATTCAAGAC
GATCCATTCCTTCGAGCAATTTTTCGAACATTCATGCTCGGAAAATCGCATCATTTGGTCCAAAT
AGTTTGTCATTTTGTAAAA
Found at i:38146633 original size:433 final size:431
Alignment explanation
Indices: 38145060--38170454 Score: 22101
Period size: 432 Copynumber: 58.5 Consensus size: 431
38145050 GAGTTCTTTT
* * * * * *
38145060 ACAACTTTTGGTCTTTGAATTACAAACCTATTTACGAGAGAATTGTTTC-CCTCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * *
38145124 CCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * *
38145189 AGATGATCCATTCCTTCGAGCAATTTTTTGAACATACTAA-GCTTGGAAAATCGCATCATTTGGT
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-AATGCTCGGGAAATCGCATCATTTGCT
* * * *
38145253 CCAAATAATTTGTCATTTTTGTAATCAATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGA
193 CCAAATAGTTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGA
* * *
38145318 ATTGTTTCTCTTC-TGGTTCTTCGCCGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT
257 ATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * * * * * * ** * *
38145382 AA-TTTCGTTTCATTAATGTATTCAAGATGATCCGTTCCATCAAGCAAGTTACCAAACATTCAAT
321 AACTTT-GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTAT
* * **
38145446 ACTCGGGAAATCGCATCATTTGCACCAAATAGTTTGTCATTTTGTAA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * ** * *
38145493 ACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCT-TTCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * * * *
38145557 CCGAAC-TTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTAT
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAG--TTCTTTTAT-AATTTGTTTCCTTAAAGTAT
* * * ** *
38145621 TAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTC-ATGCTCGAAAAATCGAATCATTT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTT
* * * ** * *** * *
38145685 ACTCCAAATAGTTTTTAAAATCGTAAA-AAAAATATGTATTTG-ATTAAAAAGTTATTTACGTGA
190 GCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
* * * * ** * *
38145748 GAATTCTTTCTCTATTGGTTCTTGGCCGAACTTTCGAACTTGTCAGGCTTTTACGATTTCTTTTA
255 GAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
** * * * * * * *
38145813 TAGTTTTGGTTCCTAAAAGTATTCAAGATGATCCATTTCTTTGAGAAATTTTCCGAACATTCCAT
320 TAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTAT
* * * * *
38145878 GCTCGGGAAATTGCATTATTTGTTGCAAATAGTTTGTCATTTTGTAA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * ***
38145925 ACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTCAC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * *
38145989 CCGAACTTCCGAACTTGTTGTTAAACCTTTATGAG-TCTTTTATAACTTTGGTTCCTTAAAGTAT
65 CCGAACTTTCGAAC---TTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTAT
* * ** ** *
38146053 TCAAGATGATTCATTCCTTCGAGCAATTTCCCGAACATTCCGTGCTC-GTAGAAT-GACATCATT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCG-CATCATT
* * * * * *
38146116 TGGTCCAACTAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTACAAACTTATTTACGAG
189 TGCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTG
** * * * *
38146181 AGAATTGTTTCCCTCTTGGTTCTTGCCCGAACTCCCAAACTTGTCAAACTTTTATAAGTTCTTTT
254 AGAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTT
* * * *
38146246 ATAACTTTGGTTCCTTAAAGTATTTAAGATGATCCATTCCTTCGAGCAATTTTTTGAACATACTA
319 ATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTA
* * * *
38146311 AGCTTGGAAAATTGCATCATTTGGTCCAAATAATTTGTCATTTTTGTAA
384 TGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * * *
38146360 TCAATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * * * *
38146425 CAAACTTTCGAACTTGTCAAGCTTTTAAGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * ** * * *
38146490 GACGATCCGTTCCATCAAGCAAGTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * ** * *
38146555 AAATAGTTTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATT
* * * *
38146620 GTTTCTTTCTTGGTTCTTGGCCGAACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAA
260 GTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG--TTCTTTTATAA
* * * * * *
38146685 ATTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGACCAATTTTTTGAACATT-TCATGC
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-ATGC
* ** * * ** *
38146749 TCGAAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCG-AA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* *** * * * *
38146793 AAAAAAATATGTATTTGAATTAAAAAGTTATTTACGTCAGAATTCTTTCTCTAT-TGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* ** * * * *
38146857 CCGAACTTTCGAACATGTCAGGCTTTTACGATTTCTTTTATAGTTTTGGTTCC-TAAGAGTATTC
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATA-ATTTGTTTCCTTAA-AGTATTC
* * * * * * * * *
38146921 AAGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGAGAAATTGGATTATTTGGT
128 AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCT
* * * * * *
38146986 CCAAATAGTTTGTCATTTTGTAAATAACTGTTTG-ACTTTCAATTACAAACTTATTTATGAGAGA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGA
* *
38147050 ATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATA
257 ATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * *
38147115 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCAAACATTCTGTGC
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGC
* * *
38147180 TCGGAGAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * *
38147225 ACAACCTTTTGTATTTGGATTAAAAACTTATTTACGTGAGTATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * *
38147290 CGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * ** * * *
38147355 GACGATCCGTTCCATCAAGCAAGTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * ** * *
38147420 AAATAGTTTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATT
* * * * *
38147485 GTTTCTTTCTTGGTTCTTGGCCGAACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAA
260 GTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAC
* * * *
38147550 TTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATT-TCATGCT
324 TTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-ATGCT
* * * ** * * ** *
38147614 TGAAAAATCACATCATTTACTCAAAATAGTTTTTCAAATCGTAA
388 CGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
*** * * * * * *
38147658 A-AAAAATATGTATTTCACTTAAAAAGTTATTTACGTGAGAATTCTTTCTCTAT-TGGCTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * * *
38147721 CCGAACTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAATACTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * ** * *
38147786 AGATGATCCATTTCTTCGAGAAATTTTTCAAACATTTC-ATGCTCGGGAAATTACATTATTTGTT
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTTGCT
* * ** * * *
38147850 CCAAATAGTTTTTCATTTTGTAAACAACCTTTTG-ACTTTTCATTTAAAACTTATTTAAGTAAGA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGA
* *** *
38147914 ATTGTTTCTCTT-GTGGTTCTCACCCGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTAT
257 ATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* *
38147978 AACTTTGGTTCCATAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTGTG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* * * *
38148043 CTCAGAGAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * *
38148089 ACAACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * *
38148153 CCGAAC-TTCTAAACTTGTCAAAGTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTC
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTC
* * * * * ** *
38148217 AAGACGATCCATTCCTTCGAGCAATTTTTTGAACATACTATGCTTGGAAAATAACATCATTTGGT
128 AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCT
* * * *
38148282 TCAAATAATTTGTCATTTTTGTAATCAA-TTTTTCTATTTGAATTAAAAACTTATTTACGTGAGA
193 CCAAATAGTTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGA
* * *
38148346 ATTGTTTCTCTTC-TGGTTCTTCGCCGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTAT
257 ATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * * * * * ** *
38148410 AA-TTTCGTTTCATTAATGTATTCAAGACGATCCGTTCCATCAAGCAACTTACCAAACATTC-AG
321 AACTTT-GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTA-
* *
38148473 TGCTCGGGAAATCGCATCATTT-GTACAGAATAGTTTGTCATTTTGTAA
384 TGCTCGGAAAATCGCATCATTTGGTCCA-AATAGTTTGTCATTTTGTAA
* * ** * * *
38148521 ACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCT-TACTGGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCT-GGTTCTTGG
* * * * *
38148585 CTGAA-TTTCTGAACTTTTCAAACTTTTATGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTAT
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAG--TTCTTTTAT-AATTTGTTTCCTTAAAGTAT
* * * * * ** *
38148649 TAAAGCCGATCTATTCCTTCGAGAAATTTTTTGAACATTTC-ATGCTCGAAAAATTGCATCATTT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTT
* * ** * * *** * * *
38148713 ACTCCAAATAGTTTTTCAAATCGTAAAAAAAAATATGTATTTGACTTAAAAAGTTATTTACGTGA
190 GCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
* * * * * * *
38148778 GAATTGTTTCTCTATTGGTTCTTGACCGAACTTTCAAACTTGTCAAACTTTTACGATTTCTTTTA
255 GAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
* * * * * * *
38148843 TAATTTTGGTTCCTTAAAGTATACAAGATGATCCATTTCTTCGAGAAATTTTCCGAACATTCCAT
320 TAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTAT
* * * * *
38148908 GCTCAGG-AAATTGCATTATTTGGTCCAAATAGCTTGTTATTTTTTAA
385 GCTC-GGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * * ***
38148955 ACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAATTATTTCTCTTGTGGTTCTCCC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * * * * *
38149019 CCGAACTTCCGAACTTGTTGTTAAACCTTTATGAGTTCTTTTACAACTTT-TGGTCTTTGAA-T-
65 CCGAACTTTCGAAC---TTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGT-TTCCTTAAAGTA
* * * * * *** ** * * *
38149081 TACAA-AC---CTATT--TACGAGAGAATTGCTTCCCTC-TT-GGTTCTTGGCCGAACTTC-CA-
125 TTCAAGACGATCCATTCCTTCGAG-CAATT-TTTCGAACATTCAATGCTCGG--GAA-ATCGCAT
* * * * * * * * * *
38149136 AACTTG-T-CAAACT--TTTATGAGTTCTT-T-TATAAC-TTTGGT-TCCTTAAAGTATTCAAGA
185 CATTTGCTCCAAA-TAGTTTGTCA-TT-TTGTAAACAACTTTTTGTAT--TT---GAATTAAAAA
* * * * * * ** ** *
38149193 -TGATCCATTCCTTCGAGCAATTTTTTGAACATACTAAG--CTT-G--GAAAAT-CGCATCATTT
242 CTTAT---TTACGT-GAG-AATTGTTT---CTTTCTTGGTTCTTGGCCGAACTTCCG-A--ACTT
* * * * ** * *
38149251 GGTCCAAA-TAATT-TGTAATT-TTTGTAATCAATTTTTTGTATTTGAATTAAAAACTTATTTAG
296 -GT-CAAACT-TTTATG-AGTTCTTT-T-AT-AA--CTTTG--GTT-CCTT--AAA-GTATTCA-
* *** ** *** * * * * ** *
38149313 GTGA-GAATTGTTTCTCTTCTG-GTTATTCGCCGAACTTTCGA-ACT-TGTCAA--GC-T-TTTA
345 -AGACG-ATCCATTC-CTTC-GAGCAATTTTTCGAACATTCTATGCTCGGAAAATCGCATCATT-
*** * * *
38149370 TGAGTTCTTTTATAATTTCGTTTCATTAATGTAT
405 TG-G-TC-CAAATAGTTT-G--TCATT-TTGTAA
* ** ** ** * * * *
38149404 TCAAGACGATCCGTTCCATCAAGCAAGTTACCAAACATTCA-ATAC-TCGGGAAATCGCATCATT
1 AC-A-AC--T-TTTTGTAT-TTG-AA-TTA-AAAAC-TT-ATTTACGT-GAG-AAT----T-GTT
* * * ** * * * * *
38149467 TGCACCAAATAGT-TTGTCATTTTGTAAAC-AACTTTTGGTATTTGAATGAAAAACTTGCTCACA
48 T-C-TC---T--TCTGGT--TCTTG--GCCGAAC-TTTCGAACTTG--T--CAAACTT--T--TA
* * *** * * ** * ** *
38149530 TGAGAATTGTTTCT-T--TCTTGGTT-CTTGGCCGAATTTC-TGAACTTTTCAAACTTTTACGAG
93 TGAG--TTCTTT-TATAAT-TTGTTTCCTT-AAAGTA-TTCAAG-ACGATCCATTC-CTT-CGAG
*** ** *** ** * * * * **
38149590 TTTTTTTTATAA-ATTTGGTTGCTTAAAGTATTAA-AGCCGATCCA-TTCCTTCAAGCAATTTTT
149 CAATTTTTCGAACA-TTCAATGC-T-CGGGA--AATCG-C-AT-CATTTGC-TCCA--AATAGTT
* * *
38149652 TGAACATTTCATGCTCGAAAAATCGAATCATTTACTCCAAATAGTTTTTCAAATCGTAAAAAAAA
203 TG-TCATTT--TG-T----AAA-C-AA-C-TTT--T-----T-GTATTT-GAAT--T---AAAAA
* * ** * *
38149717 TATGTATTTCAC-TTA-AAAAGTTAT-TTACGTGAGAATTCTTTCTCTATTGGCTCTTGGCCGAA
242 -CT-TATTT-ACGTGAGAATTGTT-TCTTTCTTG-G--TT---------------CTTGGCCGAA
* * * * * *
38149779 CTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTACTCAAGATG
285 CTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACG
* * * * * ** * *
38149844 ATCCATTTCTTCGAGAAATTTTTCAAACATTCCATGCTCGGGAAATTACATTATTTGTTCCAAAT
350 ATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGCTCGGAAAATCGCATCATTTGGTCCAAAT
*
38149909 AGTTTTTCATTTTGTAA
415 AGTTTGTCATTTTGTAA
* * * * * ***
38149926 ACAACCTTTTG-ACTTTCAATT-AAAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTCAC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * *
38149989 CCGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCATAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
** * *
38150054 AGA-GATCCATTCCTTCGAGCAATTTTTCGAACATTCTGTGCTC-GGAGAATCACATCATTTGTT
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCGCATCATTTGCT
* * * * *
38150117 CCAACTAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTACAAACTTATATACGTGAGAA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAA
* ** *
38150182 TTGTTTCTCTCTTGGTTCTTGGCCGAACTTCTAAACTTGTCAAAGTTTTATGAGTTCTTTTATAA
258 TTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA
* *
38150247 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTTGAACATACTATGCT
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGCT
* ** *
38150312 TGGAAAATAACATCATTTGGTCCAAATAATTTGTCATTTTTGTAA
388 CGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * *
38150357 TCAA-TTTTTCTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * *
38150421 CGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * ** * * * *
38150486 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAGTGATCGGGAAATCGCATCATTTGCACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * * ** ** *
38150551 CAATAGTTTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAAAAACTTGCTCGCATGAGAATT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATT
* * * * * * *
38150616 GTTTCTTTCTTGGTTTTTGGCTGAATTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAA
260 GTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG--TTCTTTTATAA
* * * * *
38150681 ATTTGGTTACTTAAAGTATTAAAGCCGATCCATTCCTTCGCA-CAATTTTTTGAACATT-TCATG
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG-AGCAATTTTTCGAACATTCT-ATG
* ** * ** ** *
38150744 CCCAAAAAATCGCATCGTTTACTCCAAATAGTTT-TCAAATCGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
**** ** * *
38150789 A-AAAAAATTGTATTTGAATTAAAATGTTATTTATGTGAGAATTGTTTCTCTAT-TTGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * *
38150852 -CGAACTTTCAAACTTGTCAGACTTTTACT-ATTTCTTTTATAATTTTGGTTCCTTAAAGTATTC
65 CCGAACTTTCGAACTTGTCAAACTTTTA-TGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTC
* * * * * * * ** * *
38150915 AAGATGATCCATTTCTTCAAGAAATTTTCCAAACATTCCATGCTCGGGAAATTACATTATTTGGT
128 AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCT
* * * *
38150980 CCAAATAGTTTTTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGA
* * * * * *
38151044 ATTGTTTCTCTT-GTGGTTCCTGCCCGAACTACCGAACTTGTTAAACTTTTACGAGTTCTTTTAT
257 ATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * *
38151108 CACTTTGGTTTCTTAAAGTATTCAATACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTGTG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
** * * *
38151173 CTAAGATAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * *
38151219 ACAACTCTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCTTGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * *
38151283 CCGAACTTCCGAACTTGTTAAACTTTTATGAGTTTTTTTATAACTTTGGTTT-CTTAAAGTATTC
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTT-GTTTCCTTAAAGTATTC
* * * ** * *
38151347 AAGATGATCCATTCTTTCGAGCAATTTTTCAAACATTCTGTGCTC-GGAGAATCACATCATTTGG
128 AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCGCATCATTTGC
* * *
38151411 TCCAACTAGTTTGTCATTTTGTAAACAAC-TTTTGTTCTTTGAATTACAAACTTATTTACGTGAG
192 TCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-TATTTGAATTAAAAACTTATTTACGTGAG
* *
38151475 AATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTAT
256 AATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* ** * *
38151540 AACTTTGGTTCCTTAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTTTAACATACTAAG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* * *
38151605 CTTGGAAAATCGCATCATTTGGTGCAAATAATTTGTCATTTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
** * *
38151652 TA-ATTTTTTTGTATTTGAATTAAAAACTTATTTACGTGACAATTGTTTCTCTTCTGGTTCTTCG
1 -ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * *
38151716 CCGAACTTTCGAACTTGTGAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCA
* * * * ** * *
38151781 AGACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATGCTCGGGAAATCGCATCATTTGCAC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * *
38151846 CAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* *** *
38151910 TTGTTTCTCTT-GTGGTTCTCACCCGAACTTCCGAACTTGTTGTTAAACCTTTTATGAGTTCTTT
258 TTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAAC---TTGTCAAA-CTTTTATGAGTTCTTT
* * * *
38151974 TATAACTTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATT-T
318 TATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT
* ** * * ** *
38152038 CATGCTCGAAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCGTAA
383 -ATGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
** * * *
38152088 A-AA-AATATGTATTTGAATTAAAAAGTTATTTACATGAGAATTGTTTCTCTAT-TGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * * * * *
38152150 CCAAAATTTCAAACTTGTCAGACTTTTACGAGTTCTTTTAAAATTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * *
38152215 AGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * *
38152280 CAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* * * * *
38152344 TTGTTTCTCTT-GTGGTTCTTGCCCGAACTTCCAAACTTCTTAAACTTTTATGAGTTCTTTTATA
258 TTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * * *
38152408 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGC
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGC
* * *
38152473 TCGGAGAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * *
38152518 ACAACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * *
38152582 CCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * *
38152647 AGACGATCCATTCCTTCCAGCAATTTTTTGAACATACTAA-GCT-TGGAAATTCGCATCATTTGG
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-AATGCTCGGGAAA-TCGCATCATTTGC
* * *
38152710 TCCAAATAGTTTGTCATTTTTGTAATCAATTTTTTGTATTTGGATTAAAAACTTATTTACGTGAG
192 TCCAAATAGTTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAG
* * * * *
38152775 AATTGTTTCTCTTC-TGGTTCTTCGCCTAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTC
256 AATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
* * * * * * * * * * ** * *
38152839 TAA-TTTCGTTTCATTAATGTATTCAAGATGATTCACTCCATCAAGTAACTTACCAAACATTCAA
320 TAACTTT-GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTA
* * ** *
38152903 TACTCGGGAAATCGCATCATTTGCACCAAATAGTTTGTCATTTTGTAC
384 TGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * ** * *
38152951 ACAACTTTTAGTATTTGAATGAAAATCTTGCTCACATGAGAATTGTTTCT-TTCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * * * * *
38153015 CTGAA-TTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTAT
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAG--TTCTTTTAT-AATTTGTTTCCTTAAAGTAT
* * * * ** *
38153079 TAAAGCCGATCCATTCCTTCGACCAATTTTTTGAACATTTC-ATGCTCGAAAAATCACATCATTT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTT
* * * ** * *** * *
38153143 ACTCCAAATAATTTTTCAAGTCGTAAA-AAAAATATGTATTTGAATTAAAAAGTTATTTACGTGA
190 GCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
* * * ** ** *
38153207 GAATTGTTTCTCTATTGGTTCTTGGCCGAACTTTCGAACTTGTCAGGCTTTTACCATTTCTTTTA
255 GAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
*** * * * * *
38153272 TTGTTTTGGTTCCTTAAAGTATTCAAGATGATCCATAT-CTTTGAGAAATTTTCCGAACATTCCA
320 TAACTTTGGTTCCTTAAAGTATTCAAGACGATCCAT-TCCTTCGAGCAATTTTTCGAACATTCTA
* * *
38153336 TGCTCGGGAAATTGCATTATTTGGTCCAAATAGTTTGTCATTTTGTAA
384 TGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * ***
38153384 ACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTCAC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * * *
38153448 CCGAACTTCCGAACTTGTTGTTAAACCTTTATGAGTTCTTTTATAACTTTGGTTGCTTAAAGTAT
65 CCGAACTTTCGAAC---TTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTAT
* * * **
38153513 TAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTC-ATGCTCGAAAAATCGCATCATTT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTT
* * * ** * *** * * *
38153577 ACTCCAAATAATTTTTCAAATCGTAAA-AAAAATATGTATTTGAACTAAAAAGTTATTTACGTGA
190 GCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
* * * ** **
38153641 GAATTGTTTCTCTATTGGTTCTTGGCCGAACTTTCGAACTTGTCAGGCTTTTACCA-TTCTTTTA
255 GAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
** * * * * ** * *
38153705 T-TGTTTCGGTTCCTTAAGGGATTCAAGATGATCCATTTCTTTAAG-AAATTTTCTGAACATTCC
320 TAACTTT-GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCT
* * * *
38153768 ATGCTCGGGAAATTGCATTATTTGTTCCAAATAGTTTGTCATTTTGTAA
383 ATGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * *
38153817 ACAACTTTTTG-ACTTTCAATT-AAAACTTATTTATGTAAGAATTGTTTCTCTTGTGGTTCTTGC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * * *
38153880 CCGAACTTCCAAACTTCTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * ** * *
38153945 AGACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGCTC-GGAGAATCACATCATTTGGT
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCGCATCATTTGCT
* * * * *
38154009 CTAACTAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAA
* *
38154074 TTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAA
258 TTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA
* * * *
38154139 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAGCAACATTTT-GAACATACTAAGC
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAA-TTTTTCGAACATTCTATGC
38154203 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTTGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * * * *
38154249 TCAATTTTTTGTATTTGAAATAAAAACTTATTTACGTGACAATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * * *
38154314 CGAACTTTCGAACTTGTGAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * ** * *
38154379 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATGCTCGGGAAATCGCATCATTTGCACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * *
38154444 AAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAAT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAAT
* *** *
38154508 TGTTTCTCTT-GTGGTTCTCACCCGAACTTCCGAACTTGTTGTTAAACCTTTTATGAGTTCTTTT
259 TGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAAC---TTGTCAAA-CTTTTATGAGTTCTTTT
* * * *
38154572 ATAACTTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATT-TC
319 ATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-
* ** * * ** *
38154636 ATGCTCGAAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCGTAA
383 ATGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
*** * * *
38154685 A-AAAAATATGTATTTGAATTAAAAAGTTATTTACATGAGAATTGTTTCTCTAT-TGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * * * *
38154748 CCAAAATTTTGAACTTGTCAGACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * *
38154813 AGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * * *
38154878 CACATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* * * * *
38154942 TTGTTTCCCTT-GTGGTTCTTGCCCGAACTTCCGAACTTATTAAACTTTTATGAGTTCTTTTATA
258 TTGTTT-CTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * * * * *
38155006 ACTTTGGTACCTTAAAGTATTCAAGACGATCCATTCATTCGAACAATTTTCCGAACATTTTGTGC
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGC
* * * *
38155071 TCGGAGAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAT
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * **
38155116 ACAACTTTTGGTCTTTGAATTACTAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * *
38155180 CCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * *
38155245 AGACGATCCATTCCTTCCAGCAACATTTT-GAACATACTAA-GCTCGGAAAATCGCATCATTTGG
129 AGACGATCCATTCCTTCGAGCAA-TTTTTCGAACATTC-AATGCTCGGGAAATCGCATCATTTGC
* * * *
38155308 TCCAAATAATTTGTCATTTTTGTAATCAATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAG
192 TCCAAATAGTTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAG
* * * *
38155373 AATTGTTTCTCTTC-TGGTTCTTCGCCGAACTTTCGAACTTGTCAAGCTTTTATTAGTTCTTTTA
256 AATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
* * * * * * * * ** * *
38155437 TAA-TTTCGTCTCATTAATGTATTCAAGACGATCCGTCCCATCAAGCAACTTACCAAACATTCAA
320 TAACTTTGGT-TCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTA
* * **
38155501 TACTCGGGAAATCGCATCATTTGCACCAAATAGTTTGTCATTTTGTAA
384 TGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * ** * *
38155549 ACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCT-TTCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * * * * *
38155613 CCGAA-TTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAATTATT
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAG-TTCTTTTAT-AATTTGTTTCCTTAAAGTATT
* * * ** *
38155677 AAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTC-ATGCTCGAAAAATCGCATCATTTA
127 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTTG
* * ** * *** * *
38155741 CTCCAAATAATTTTTCAAATCGTAAA-AAAAATATGTATTTGAATTAAAAAGTTATTTACGTGAG
191 CTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAG
* * * ** ** *
38155805 AATTGTTTCTCTATTGGTTCTTGGCCGAACTTTCGAACTTGTCAGGCTTTTACCATTTCTTTTAT
256 AATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
*** * * * *
38155870 TGTTTTGGTTCCTTAAAGTATTCAAGATGATCCATTTCTTCGAG-AAATTTTCGGAACATTCCAT
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCTAT
* * * *
38155934 GCTCGGGAAATTGCATTATTTGGTCCAAATAGTTTGTCATTCTGTAA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * *
38155981 ACAACTTTTTG-ACTTTCAATTACAAACTTATTTACGAGAGAATTGTTTCTC-TCTTGGTTCTTG
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTG
* * *
38156044 GTCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTT-TGTTCCTTAAAGTATT
64 GCCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGT-TTCCTTAAAGTATT
* * * * * * * *
38156108 CAAGACGATACATTCCTTCGAGCAATTTTTTGAACGTACTATGCTTGGAAAATCGCATCATTTGG
127 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGC
* * * * * *
38156173 TCCAAATAATTTGTTATTTTTGTAATCAATTTTTTTGTATTTGAAATAAAAACTTATTTAC--CA
192 TCCAAATAGTTTGTCA-TTTTGTAAACAA-CTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
** ** * * * ** ** * * * *
38156236 -AACTT-TCGAACTTGTCAAGCTT-TTATG-AGTTCTT-TTATAATT-TC--A-TTTCATTAATG
255 GAA-TTGT--TTCTT-TCTTGGTTCTT-GGCCGAACTTCCGA-ACTTGTCAAACTTTTATGAGT-
* * * ** * * * * * * * *
38156292 T-ATTCA-AGACGATCCGTTCCATCAAGCAACTTACCAA-AC-ATTCAATAC-TCG-GGAA---A
313 TCTTTTATA-AC-TTTGGTTCCTTAAAG-TA-TT--CAAGACGATCCATTCCTTCGAGCAATTTT
* * * * **
38156348 TCG--CA-TCATTTGCAC--AAAATAG-ATTGTCATTTTGT---AA-AG---AAC-TTTTGGT--
372 TCGAACATTC-TATGCTCGGAAAATCGCA---TCATTTGGTCCAAATAGTTTGTCATTTT-GTAA
* * ** * *
38156397 ---A-TTTG--------AATGAAAAACTTGCTCACATGAGAATTGTTTCT-TTCTAGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCT-GGTTCTTGG
* * * * * * * * *
38156449 CTGAATTTTTGAACTTTTCAAAATTTTACGAGTTTTTTTTTTATAAATTTGGTTGCTTAAAGTAT
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAG---TTCTTTTAT-AATTTGTTTCCTTAAAGTAT
* * * * **
38156514 TAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATTTC-ATGCTTGAAAAATCGCATCATTT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTT
* * * ** * *** *
38156578 ACTCCAAATAATTTTTCAAATCGTAAA-AAAAATATGTATTTGAATTAAAAA-TTATTTACGTGA
190 GCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
* * * * * * * *
38156641 CAATTGTTTCTCTATTAGTTCTTGGCCGAACTTTCGAACTTGTCAGACTTTTACGAGTTCTTGTA
255 GAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
* * * * *
38156706 TAATTTTGGTTCCTTAAAGTATTCAAGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCAT
320 TAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTAT
* * * *
38156771 GCTCGGGAAATTGCATTATTTGTTCCAAATAGTTTGTCATTTTGTAA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * *
38156818 ACAACTTTTTG-ACTTTCAATTAAAAACTTATTTATGTAAGAATTGTTTCTCTTGTGGTTCTTGC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * * *
38156882 CCGAACTTCCAAACTTCTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * ** * *
38156947 AGACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGCTC-GGAGAATCACATCATTTGGT
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCGCATCATTTGCT
* * * *
38157011 CCAACTAGTTTGTCAATTTGTATACAACTTTTTG-ACTTTGAATTACAAACTTATTTACGTGAGA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGA
* *
38157075 ATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATA
257 ATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* *
38157140 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAACTTTTT-GAACATACTAAG
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAA-TTTTTCGAACATTCTATG
* *
38157204 CTCGGAAAATCGCATCATTTGGTCCTAATAATTTGTCATTTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * * *
38157251 TCAATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * *
38157316 CGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * ** * * *
38157381 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * ** *
38157446 AAATAGTTTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAAAAACTTGCTCACAG-GAGAAT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTAC-GTGAGAAT
* * * *
38157510 TGTTTCTTTCTTGGTTCTTGGCCGAACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAA
259 TGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG-TTCTTTTATAA
* * * * * * *
38157575 ATTTGGTTGCTTAAGGTATTAAAGCCGATCCATTCCTTCGAGAAATTTTTTGAACATT-TCATGC
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-ATGC
* ** * * ** *
38157639 TCGAAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
*** * * * *
38157684 A-AAAAATATGTAATCGAATTAAAAAGTTATTTACGTGAGAATTGTTTCTCTAT-TGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * * * * *
38157747 CCAAAATTTCAAACTTGTCAGACTTTTACGAGTTCTTTTAAAATTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * * *
38157812 AGATGATCCATTTCTTCGAGAAATTTTCCGAACATTCCATGCTCGGGAAATTGCATTATTTGGTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * * *
38157877 CAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACATTCAATTACAAACTTATTTACGAGAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* * * * *
38157941 TTGTTTCTCTCTTTGTTCTTGGCTGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTAAAA
258 TTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA
* * * *
38158006 CTTTGGTTCCTTAAGGTATTCAAGACGATCAATTCCTTCCAGCAAATTTTT-GAACATACTATGC
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC-AATTTTTCGAACATTCTATGC
* *
38158070 TTGGAAAATCGCATCATTTGGTCCAAATAATTTGTCATTTTTGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * * *
38158116 TCAAATTTTT-TATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * * *
38158180 CGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTATAATTTCATTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * ** * * * *
38158245 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACA
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * * * ** * *
38158310 AAATAGATTGTCATTTTGTAAAGAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATT
* * * ** * * * *
38158375 GTTTCTTTCTAGGTTCTTGGCTGAATTTTTGAACTTTTCAAAATTTTACGAGTTTTTTTTTTATA
260 GTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG---TTCTTTTATA
* * * *
38158440 A-TTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATT-TCATG
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-ATG
* * ** * * ** *
38158503 CTTGAAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
*** * * *
38158549 A-AAAAATATGTATTTGAATTAAAAA-TTATTTACGTGACAATTGTTTCTCTAT-TAGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * *
38158611 CCGAACTTTCGAACTTGTCAGACTTTTACGAGTTCTTGTATAATTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * *
38158676 AGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * * *
38158741 CAAATAGTTTGTCATTTTGTAAACAACCTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* * *
38158805 TTGTTTCTCTT-GTGGTTCTT-GCTCGAACTTCTGAACTTGTTAAACTTTTATGAGTTCTTTTAT
258 TTGTTTCT-TTCTTGGTTCTTGGC-CGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * ** *
38158868 AACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCTTTCGAATAATTTTTCGAACATTCTGTG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* * * * * *
38158933 CTTGGAGAATCACATCATTTGGTCCAACTAGTTTGTCAATTTGTAT
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * **
38158979 ACAACTTTTGGTCTTTCAATTACTAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * *
38159043 CCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * *
38159108 AGACGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGCTCGGAAAATCGCATCATTTGGTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * *
38159173 CAAAT-GATTTATCATTTTTGTAATCAATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGA
194 CAAATAG-TTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGA
* * * * *
38159237 ATTGTTTCTCTTC-TGGCTCTTCGCCGAACTTTCGAACTTTTCAAGCTTTTATGAGTTCTTTTAT
257 ATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * * * * * * *** * *
38159301 AA-TTTCGTTTCATTAACGTATTCAAGACGATCCGTTCCATCAAGGAACTAACCAAACATTCAAT
321 AACTTT-GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTAT
* * ** *
38159365 ACTCGGGAAATCGCATCATTTGCACCAAATAGATTGTCATTTTGTAA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * ** * *
38159412 AAAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCT-TTCTAGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCT-GGTTCTTGG
* * * * *
38159476 CTGAA-TTTCTGAACTTTTCAAAC-TTTATGAGTTTGTTTTTATAAATTTGGTTGCTTAAAGTAT
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAG-TT-CTTTTAT-AATTTGTTTCCTTAAAGTAT
* * * * **
38159539 TAAAGCCGGTCCATTCCTTCGAGCAATTTTTTGAACATTTC-ATGCTCGAAAAATCGCATCATTT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTT
* * * ** * *** * *
38159603 ACTCCAAATAATTTTTCAAATCGTAAA-AAAAATATGTATTTGAATTAAAAAGTTATTTACGTGA
190 GCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
* * * * * * * * *
38159667 GAATTCTTTCTCTATTGGTTCTTGGCCAAAATTTCAAACTTGTCAGACTTTTACGAGTTCTTTTA
255 GAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
* * * * * *
38159732 TAATTTTGGTTCCTTAAAGTATTCAAGATGGTCCATTTCTTCGAGAAATTTTTCGAACATTCCAT
320 TAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTAT
* * * * *
38159797 GCTCGGGAAATTGCATTATTTGTTCCAAATAGTTTGTCATTTTGGAA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * *
38159844 ACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTTGC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * * *
38159908 CCGAACTTCCGAACTTGTTAAACTTTTATAAGCTCTTTTACAACTTT-TGTTCCTTAAAGTATTC
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGT-TTCCTTAAAGTATTC
* * * * * * * *
38159972 AGGACGATCCATTCTTTCGAGCAA-TTTTCTGAGCACTCTATGCT-TGGAGGATCACATCATTTG
128 AAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCAATGCTCGGGA-AATCGCATCATTTG
* * * * *
38160035 GTCCAACTAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAG
191 CTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAG
* * *
38160100 AATTGTTTCTCTCTTGGTTCTTGGCCGAACCTCCAAACTTGTCAAACTTTTATGAGTTCTTTTAT
256 AATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * * *
38160165 AACTTTGTTTCCTTAAAGTATTCCAGACGATCCATTCCTTCCAGCAATTTTTTGAACATACTATG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* *
38160230 CTTGGAAAATCGCATCATTTGGTCCAAATAATTTGTCATTTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * * *
38160277 TCAATTTTTTGTATTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * *
38160342 CGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * ** * * **
38160407 GACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGAACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * ** * *
38160472 AAATAGTTTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATT
* * * * * *
38160537 GTTTCTTTCTTGGTTCTTGGCCGAACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTGTAAA
260 GTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAC
* * * * *
38160602 TTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAA-TTTC-ATGCTC
324 TTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGCTC
* ** * * ** *
38160665 GAAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCGTAA
389 GGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
*** * * * *
38160708 A-AAAAATATGTATTTGAATTAAAAAGTTATTTACGTCAGAATTCTTTCTCTAT-TGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* ** * * * * *
38160771 CCTAACTTTCGAACTTGTCAGGCTTTT-CGATTTCTTTTATAGTTTTGGTTCCTAAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATA-ATTTGTTTCCTTAAAGTATTCA
* * * * * * * * *
38160835 AGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGAGAAATTGGATTATTTGGTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * * *
38160900 CAAATAGTTTGTCATTTTGTAAATAACTTTTTG-ACTTTCAATTACAAACTTATTTACGAGAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* *
38160964 TTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAA
258 TTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA
* * *
38161029 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCAAACATTCTGTGCT
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGCT
* * *
38161094 CGGAGAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAA
388 CGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * *
38161138 ACAACCTTTTGTATTTGGATTAAAAACTTATTTACGTGAGTATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * * *
38161203 CGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTATAATTTCATTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * * ** * * * *
38161268 GACTATCCGTTCCATCAAGCAACTTACCAAACATTCAATACTTGGGAAATCGCATCATTTGCACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * * * * ** ** *
38161333 CAATAGTTTATCATTTTGTAAAGAACTTTTGGTATTTGAATGAAAAACTTGCTCGCATGAGAATT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATT
* * * * * * * *
38161398 GTTTCTTTCTTGGTTCTTGGCTGAATTTCTGAACTTTTCAAACTTTTACGAATTTTTTTTATAAA
260 GTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATG-AGTTCTTTTATAAC
* * * *
38161463 TTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATT-TCATGCT
324 TTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-ATGCT
* * ** ** **
38161527 C-AAAAATCGCATCGTTTACTCCAAATAGTTT-TCAAATCATAA
388 CGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* **** * * *
38161569 AAAAAAAATT-TATTTGAATTAAAAAGTTATTTATGTGAGAATTGTTTCTCTAT-TTGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * *
38161632 CCGAACTTTCGAACTTGTCAGACTTTTACGATTTCTTTTATAATTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * ** * *
38161697 AGATGATCCATTTCTTCAAG-AAATTTTCTGAACATTCCATGCTCGGGAAATTACATTATTTGGT
129 AGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCAATGCTCGGGAAATCGCATCATTTGCT
* * *
38161761 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGA
* * * * *
38161825 ATTGTTTCTCTT-GTGGTTCTTGCCCGAACTACCGAACTTGTTAAACTTTTACGAGTTCTTTTAT
257 ATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * *
38161889 CACTTTGGTTTCTTAAAGTATTCAAGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCTGTG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* * *
38161954 CTCGGATAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * *
38162000 ACAACTCTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCTTGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* *
38162064 CCGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTT-CTTAAAGTATTC
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTT-GTTTCCTTAAAGTATTC
* * * ** * *
38162128 AAGATGATCCATTCTTTCGAGCAATTTTTCAAACATTCTGTGCTC-GGAGAATCACATCATTTGG
128 AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCGCATCATTTGC
* * *
38162192 TCCAACTAGTTTGTCATTTTGTAAACAAC-TTTTGTTCTTTGAATTACAAACTTATTTACGTGAG
192 TCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-TATTTGAATTAAAAACTTATTTACGTGAG
* *
38162256 AATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTAT
256 AATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* ** * *
38162321 AACTTTGGTTCCTTAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTTTAACATACTAAG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* * *
38162386 CTTGGAAAATCGCATCATTTGGTGCAAATAATTTGTCATTTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
** * *
38162433 TA-ATTTTTTTGTATTTGAATTAAAAACTTATTTACGTGACAATTGTTTCTCTTCTGGTTCTTTG
1 -ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * * *
38162497 CCGAACTTTCAAACTTGTGAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCA
* * * * ** * *
38162562 AGACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATGCTCGGGAAATCGCATCATTTGCAC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * * * ** * * *
38162627 CAAACAGATTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAAAAT
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAAT
* * * *
38162692 TGTTTCTTTCTTGGTTCTTGGCCGAACTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAA
259 TGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG-TTCTTTTATAA
* * * * *
38162757 ATTTGGTT-CTTAAAGTATTAAAGCCGATCCATTCCTTCGACCAATTTTTTGAACATT-TCATGC
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-ATGC
* * ** * * ** *
38162820 TCGAAAAATCACATCATTTACTCCAAATAATTTTTCAAATCGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
*** * ** *
38162865 A-AAAAATATGTATTTGAATTAAAAAGATATTTACATGAGAATTGTTTCTCTAT-TGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * * *
38162928 CCAAAATTTCGAACTTGTCAGACTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * **
38162993 AGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTATTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * *
38163058 CAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* ** *
38163122 TTGTTTCTCTT-GTGGTTCTTACCCGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATA
258 TTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * *
38163186 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCTTTCGAACAATTTTTCGAACATTCTGTGC
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGC
* * *
38163251 TCGGAGAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * ** *
38163296 ACAACTTTTGGTCTTTGAATTGCAAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCCTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * *
38163360 CCGAACTTGCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * * *
38163425 AGACGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGCTTGGAAAATTGCATCATTTGGTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * *
38163490 CAAATAGTTTGTCATTTTTGTAATCAATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGTA
194 CAAATAGTTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAA
* * * * *
38163555 TTGTTTCTCTTC-TGGTTCTTCGTCGAACTTTCGAACTTATCAAGCTTTTATGAGTTCTTTTATA
258 TTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * * * * * * * ** * * *
38163619 A-TTTCGTTTCATTAATGTATTCAAGATGATCCACTCCATCAAGCAACTTACCAAACATTCAATA
322 ACTTT-GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* **
38163683 CTC-AAGAAATCGCATCATTTGCACCAAATAGTTTGTCATTTTGTAA
386 CTCGGA-AAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* ** * *
38163729 ACAACTTTTTGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCT-TTCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * * * * *
38163793 CCGAAC-TTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAATTTGGTTGCTTAAATTATT
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAG-TTCTTTTAT-AATTTGTTTCCTTAAAGTATT
* * * * ** *
38163857 AAAGTCGATCCATTCCTTTGAGCAATTTTTTGAACATTTC-ATGCTCGAAAAATCGCATCATTTA
127 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTTG
* * ** * *** * * *
38163921 CTCCAAATAATTTTTCAAATCGTAAA-AAAAATATGTATTTGAATTAAAAAGTTATTTATGTGAG
191 CTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAG
* * * * * ** ** *
38163985 AATTGTTTCTCTATTGGTTCTTGTCCAAACTTTCGAACTTGTCAGGCTTTTACCATTTCTTTTAT
256 AATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
*** * * * *
38164050 TGTTTTGGTTCCTTAAAGTATTCAAGATGATCCA-TCTCTTCGAGCAATTTTCCAAACATTCCAT
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTC-CTTCGAGCAATTTTTCGAACATTCTAT
* * * * *
38164114 GGTCGGGAAATTGCATTATTTGGTCCAAATAG-TTGTCATTTTGTGA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * *
38164160 ACAACTTTTTG-ACTTTCAATTACAAACTTATTTACGAGAGAATTGTTTCTC-TCTTGGTTCTTG
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTG
* * * *
38164223 GCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTGTTTTATAACTTTGGTTCCTTAAAGTATTC
64 GCCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTC
* * * * * * * *
38164288 AAGACGATCCATTCCTTCGAGCAATTTTTTGAACGTACTATGCTTGGAAAATCTCATCATTTGGT
128 AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCT
* * * * *
38164353 CCAAATAATTTGTCATTTTTGTAATCAATTTTTTGTCTTTGAAATAAAAACTTATTTACGTGAGA
193 CCAAATAGTTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGA
* * * * *
38164418 ATTGTTTCTCTTC-TAGTTCTTCGCCGAACTTTCGAACTTTTCAAGCTTTTATGAGTTCTTTTAT
257 ATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * * * * * ** * *
38164482 AA-TTTCGTTTCATTAATGTATTCAAAACGATCCATTCCATCAAGCAACTTACCAAACATTCAAT
321 AACTTT-GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTAT
* * ** * **
38164546 ACTCGGGAAATCGCATCATTTGCACCAAACAAATTGTCATTTTGTAA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * ** * *
38164593 ACAACTTTTGGTGTTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCT-TTCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * * * * *
38164657 CTGAA-TTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAAGTAT
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAG--TTCTTTTAT-AATTTGTTTCCTTAAAGTAT
* * * * **
38164721 TAAAGCCGATCCATTCCTTCGACCAATTTTTTGAACATTTC-ATGCTCGAAAAATCGCATCATTT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTT
* * * ** * *** * *
38164785 ACTCCAAATAATTTTTCAAATCGTAAA-AAAAATATGTATTTGAATTAAAAAGTTATTTACGTGA
190 GCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
* * * * * * *
38164849 GAATTGTTTCTCTATTGGTTCTTGG-TGAAAATTTCGAACTTGTCAGACTTTTACGAGTTCTTTT
255 GAATTGTTTCTTTCTTGGTTCTTGGCCG-AACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTT
* * * * *
38164913 ATAATTTTGGTTCCTTAAAGTATTCAAGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCA
319 ATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTA
* * * *
38164978 TGCTCGGGAAATTGCATTATTTGTTCCAAATAGTTTGTCATTTTGTAA
384 TGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * *
38165026 ACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTTGC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * *
38165090 CCGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * ** * *
38165155 AGATGATCCATTCTTTCGAGCAATTTTCCGAACATTCTGTGCTC-GGAGAATCACATCATTTGGT
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCGCATCATTTGCT
* * * *
38165219 CCAACTAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAA
* * *
38165284 TTGTTTCTCTCTTTGGTTCCTGGCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATA
258 TTGTTTCTTTC-TTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * * *
38165349 ACTTTGGTCCCTTAAAGTATTCAAGACGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGC
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGC
*
38165414 TTGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTTGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * * * *
38165460 TCAATTTTTTGTATTTGGATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * * *
38165525 CGAACTTTCGAACATGTCAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * * ** * * *
38165590 GATGATCCACTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATCGCATCATTTGCACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * ** * *
38165655 AAATAGTTTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATT
** * * *
38165720 GTTTCTTTCTTGGTTCTTGGCCGAACTTTTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAA
260 GTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG--TTCTTTTATAA
* * * * * * *
38165785 ATTTGGTTGCTTAAATTATTAAAGTCGATCCATTCCTTTGAGCAATTTTTTGAACATT-TCATGC
323 CTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-ATGC
* ** * * ** *
38165849 TCGAAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
*** * * * *
38165894 A-AAAAATATATATTTGAATTAAAAAGTTATTTACGTGACAATTGTTTCTCTAT-TGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
** ** * * ** *
38165957 CCGAACTTTCGAACTTGTCAGGCTTTTTTTACCATTTCCTTTATTGTTTTGGTTCCTTAAAGTAT
65 CCGAACTTTCGAACTTGTCAAAC---TTTTATGAGTTCTTTTA-TAATTTGTTTCCTTAAAGTAT
* ** * * * * * *
38166022 TCAAGATGATCCATTTTTTCGAGAAATTTTCCGAACATTCCATGGTCGGGAAATTGCATTATTTG
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTG
* * * * *
38166087 GTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTACAAACTTATTTATGAGA
191 CTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGA
* *
38166151 GAATTGTTTCTCTCTTGGTTCTTGGCCGAACTT-CGAAACATGTCAAACTTTTATGAGTTCTTTT
255 GAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCG-AACTTGTCAAACTTTTATGAGTTCTTTT
* * * * *
38166215 ATAACTTTGGTTCCTTAAAGTATTCATGACGATCCATTCCTTCGAGAAATTTTTTGAACGTACTA
319 ATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTA
* * *
38166280 TGCTTGGAAAATCTCATCATTTGGTCCAAATAATTTGTCATTTTTGTAA
384 TGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * * * *
38166329 TCAATTTTTTGTCTTTGAAATAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * * *
38166394 CGAACTTTCGAACTTTTCAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * ** * * * *
38166459 AACGATCCATTCCATCAAGCAACTTACCAAACATTCAATACTCGGGAAATTGCATCATTTGCACC
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* ** * * ** * *
38166524 AAACAAATTGTCATTTTGTAAACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATT
* * * * * * * *
38166589 GTTTCTTTCTTGGTTCTTGACTGAATTTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTATAAA
260 GTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAG-TTCTTTTATAAC
* * * *
38166654 TTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGAGCAATTTTTTGAACATT-TCATGCT
324 TTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-ATGCT
** ** * * ** *
38166718 CTAAAAATCGCATCATTTACTCCAAATAATTTTTCAAATCGTAA
388 CGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
** * *
38166762 A-AA-AATATGTATTTGAATTAAAAAGTTATTTACGTGAGAATTGTTTCTCTAT-TGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * ** * *
38166824 CCAAAATTTCGAACTTATCAGTCTTTTACGAGTTCTTTTATAATTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * * *
38166889 AAATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * *
38166954 CAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* * *
38167018 TTGTTTCTCTT-GTGGTTCTTGCCCGAACTTCCGAACTTGTTAAACTTTTATGAGTTCTTTTATA
258 TTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * * * *
38167082 ACTTTGGTTCCTTAAAGTATTCAAAACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTGC
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGC
* * * *
38167147 TCGGAGAATCACATCATTTAGTCCAACTAGTTTGTCATTTTGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * *
38167192 ACAACTTTTGGTCTTTCAATTACAAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * *
38167256 CCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * *
38167321 AGATGATCCATTCCTTCGAGCAATTTTTTGAACATACTAA-GCTTGGAAAATCGCATCATTTGGT
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTC-AATGCTCGGGAAATCGCATCATTTGCT
* * * * *
38167385 CCAAATAATTTGTCATTTTTGTAATCAA-TTTTTTTATTTGAATTCAAAACTTATTTAGGTGAGA
193 CCAAATAGTTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGA
* * * * *
38167449 ATTGTTTCTCTTC-TGGTTCTTCGTCGAACTTTCGAACTTTTCAAGCTTTTATGAGTTCTTTTAT
257 ATTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * * * * * * ** * * *
38167513 AATTTTGTTTCATTAATGTATTCAAGACGATCCGTTCCATCAAGCAACTTACCAAACATTCAATA
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* ** *
38167578 CTCGGGAAATCGCATCATTTGCACCAAATAGTTTATCATTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * ** * *
38167624 ACAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCT-TTCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * * * * *
38167688 CCGAAC-TTCTGAACTTTTCAAACTTTTACGAGTTTTTTTTTATAAATTTGGTTGCTTAAATTAT
65 CCGAACTTTC-GAACTTGTCAAACTTTTATGAG--TTCTTTTAT-AATTTGTTTCCTTAAAGTAT
* * * * **
38167752 TAAAGCCAATCCATTCCTTCGAGCAATTTTTTGAACATTTC-ATGCTCGAAAAATCGCATCATTT
126 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTT
* * * ** * *** * * *
38167816 ACTCCAAATAATTTTTCAAATCGTAAA-AAAAATATGTATTTGAATTAAAAAGTTATTTATGTGA
190 GCTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGA
* * * * * * * *
38167880 GAATTCTATCTCTATTGGCTCTTGGCCGAACTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTA
255 GAATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTA
* * * * *
38167945 TAATTTTGGTTCCTTAAAGTACTT-AAGAAGATCCATTTCTTCGAGAAATTTTTCGAACATTCCA
320 TAACTTTGGTTCCTTAAAGTA-TTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTA
* ** * * *
38168009 TGCTCGGGAAATTACATTATTTGTTCCAAATAGTTTTTCATTTTGTAA
384 TGCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * * * *
38168057 ACAACCTTTTG-ACTTTCAATTTAAAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTTGC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * * * *
38168121 CCGAACTTCCGAACTTGTTAAATTTTTATAAGTTCTTTTATAACTTTGGTTCCTTAAAGTATT-T
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * ** * * *
38168185 AGAACGATCCATTCCTTCGACCAAATTTTCGAACATTCTGTGCTC-GGAGAATCACAACATTTGG
129 AG-ACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCGCATCATTTGC
* * * * * *
38168249 TCCAACTAGTTTGTAATTTTGTAAACAACTTTTGGTCTTTGAATTACAAACTTATTTGCGTGAGA
192 TCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGA
* *
38168314 ATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCAAACTTGTCAAACTTTTATGAGTTCTTTTATA
257 ATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * * *
38168379 GCTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTTGAACATGCTACGC
322 ACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGC
* *
38168444 TTGGAAAATCGCATCATTTGGTCCAAATAATTTGTCATTTTTGTAA
387 TCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCA-TTTTGTAA
* * * *
38168490 TCAATTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTTGTTCTTCGC
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
* * *
38168555 CGAACTTTCGAACTTGTCAAGCTTTTATGAGTTCTTTTATAATTTCGTTTCATTAATGTATTCAA
66 CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTT-GTTTCCTTAAAGTATTCAA
* * * * * ** * * * * * *
38168620 AACGATCCATTCCATCAAGGAACTTACCAAACATTCAGTACTCGGGAAATCACATCATTTGCACA
130 GACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCC
* * * ** * *
38168685 AAATAGATTGTCATTTTGTAAAGAAC-TTTTGATATTTGAATGAAAAACTTGCTCACATGAGAAT
195 AAATAGTTTGTCATTTTGTAAACAACTTTTTG-TATTTGAATTAAAAACTTATTTACGTGAGAAT
* ** * * * *
38168749 TGTTTCTTTCTTAGTTCTTGGCTAAATTTCTGAACTTTTCAAACTTTTACT-AGTTTTTATTTAT
259 TGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTA-TGAG-TTCT-TTTAT
* * * * * *
38168813 AAATTTGGTTGCTTAAAGTATTAAAGCCGATCCATTCCTTCGACCAATTTTTTGAACATT-TCAT
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCT-AT
* * ** * * ** *
38168877 GCTCGAAAAATCACATCATTTACTCCAAATAATTTTTCAAATCGTAA
385 GCTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
*** * * * *
38168924 A-AAAAATATGTATTTGAATTAAAAAGTTATTTACATGAGAATTGTTTCTCTAT-TAGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCT-TCTGGTTCTTGG
* * * *
38168987 CCGAACTTTCGAACTTGTCAGACTTTTACGAGTTCTTGTATAATTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * *
38169052 AGATGATCCATTTCTTCGAGAAATTTTTCGAACATTCCATGCTCGGGAAATTGCATTATTTGTTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* * *
38169117 CAAATAGTTTGTCATTTTGTAAACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAA
194 CAAATAGTTTGTCATTTTGTAAACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAA
* ** *
38169181 TTGTTTC--TCTTGCGGTTCTTGCCCGAACTTTTGAACTTGTTAAACTTTTATGAGTTCTTTTAT
258 TTGTTTCTTTCTT--GGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * * *
38169244 AACTTTGGTTCCATAAAGTATTCAAGACGATCCATTCTTTCGAACAATTTTCCGAACATTCTGTG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* * *
38169309 CTCGGAGAATCACATCATTTGGTCCAACTAGTTTGTCATTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * *
38169355 ACAACTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATTGTTTCTC-TCTTGGTTCTTGG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTC-TGGTTCTTGG
* * * *
38169419 CCGAACTTCCAAACTTGTCAAACTTTTATGTGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * * *
38169484 AGATGATCCATTCCTTCCAGCAATTTTTTGAACATACTATGCTTGGAAAATCGCATCATTTGGTC
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTC
* *
38169549 CAAATAATTTGTCATTTTTGTAATCAA-TTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAA
194 CAAATAGTTTGTCA-TTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAA
* * * * *
38169613 TTGTTTCTCTTC-TGGTTCTTCGTCGAACTTTCGAACTTTTCAAGCTTTTATGAGTTCTTTTATA
258 TTGTTTCT-TTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
* * * * * * * * * *** * * *
38169677 A-TTTCGTTTCATTAATGTATTCAAGACAATCCGTTCCATCAAGAAACTAACCAAACATTCAATA
322 ACTTT-GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* ** *
38169741 CTCGGGAAATCGCATCATTTGCACCAAATAGATTGTCATTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * ** * * *
38169787 AAAACTTTTGGTATTTGAATGAAAAACTTGCTCACATGAGAATTGTTTCT-TTCTAGGTTCTTAG
1 ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCT-GGTTCTTGG
** * * * *
38169851 CTAAATTTTTGAACTTTTCAAAC-TTTATGAGTTTTTTTTATAAATTT-TGTTCCTTAAAGTATT
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAG-TTCTTTTAT-AATTTGT-TTCCTTAAAGTATT
* * * * * ** *
38169914 AAAGCCGGTCCATGCCTTCGAGCAATTTTTTGAACATTTC-ATGCTCGAAAAATCGCATCATTTA
127 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCAATGCTCGGGAAATCGCATCATTTG
* * ** * *** * *
38169978 CTCCAAATAATTTTTCAAATCGTAAA-AAAAATATGTATTTGAATTAAAAAGTTATTTACGTGAG
191 CTCCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAG
* * * * * * * * *
38170042 AATTCTTTCTCTATTGGTTCTTGGCCAAAATTTCAAACTTGTCAGACTTTTACGAGTTCTTTTAT
256 AATTGTTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * * * *
38170107 AATTTTGGTTCCTTAAAGTATTCAAGATGGTCCATTTCTTCGAGAAATTTTTCGAACATTCCATG
321 AACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATG
* * * *
38170172 CTCGGGAAATTGCATTATTTGTTCCAAATAGTTTGTCATTTTGTAA
386 CTCGGAAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
* * * * *
38170218 ACAACTTTTTG-ACTTTCAATTAAAAACTTATTTAAGTAAGAATTGTTTCTCTTGTGGTTCTTGC
1 ACAACTTTTTGTA-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGG
* * * * * *
38170282 CCGAACTTCCGAACTTGTTAAACTTTTATAAGCTCTTTTACAACTTTG-TTCCTTAATGTATTCA
65 CCGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAA-TTTGTTTCCTTAAAGTATTCA
* * * * * * ** * * *
38170346 GGACGATCAATTCTTTTGAGCAATTTTCCGAACACTCTGTGCT-TGGAGAATCACATCATTTGGT
129 AGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGA-AATCGCATCATTTGCT
* * * *
38170410 CCAACTAGTTTGTCATTTTATAAACAACTTTTGGTCTTTGAATTA
193 CCAAATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTA
38170455 CAAGATGATA
Statistics
Matches: 20104, Mismatches: 4091, Indels: 1536
0.78 0.16 0.06
Matches are distributed among these distances:
403 16 0.00
404 89 0.00
405 16 0.00
406 12 0.00
407 107 0.01
408 13 0.00
409 1 0.00
410 3 0.00
412 15 0.00
413 3 0.00
414 5 0.00
415 3 0.00
416 2 0.00
417 3 0.00
418 3 0.00
419 3 0.00
420 4 0.00
421 2 0.00
422 3 0.00
423 6 0.00
424 6 0.00
425 26 0.00
426 5 0.00
427 18 0.00
428 77 0.00
429 493 0.02
430 1235 0.06
431 2452 0.12
432 6151 0.31
433 5109 0.25
434 2200 0.11
435 968 0.05
436 314 0.02
437 230 0.01
438 5 0.00
440 2 0.00
441 4 0.00
442 3 0.00
443 6 0.00
444 7 0.00
445 10 0.00
446 11 0.00
447 26 0.00
448 15 0.00
449 8 0.00
450 1 0.00
451 2 0.00
452 1 0.00
453 1 0.00
454 6 0.00
455 6 0.00
456 2 0.00
457 3 0.00
458 5 0.00
459 5 0.00
460 4 0.00
461 1 0.00
463 3 0.00
464 2 0.00
465 6 0.00
466 2 0.00
467 4 0.00
470 1 0.00
471 4 0.00
472 6 0.00
473 2 0.00
474 9 0.00
475 11 0.00
476 5 0.00
477 5 0.00
478 5 0.00
479 6 0.00
480 11 0.00
482 6 0.00
483 19 0.00
484 6 0.00
485 10 0.00
486 4 0.00
487 15 0.00
488 3 0.00
489 3 0.00
490 5 0.00
491 14 0.00
492 1 0.00
493 4 0.00
494 1 0.00
495 10 0.00
496 4 0.00
497 3 0.00
498 2 0.00
499 4 0.00
500 4 0.00
501 5 0.00
502 2 0.00
503 1 0.00
504 2 0.00
505 3 0.00
506 1 0.00
509 1 0.00
510 4 0.00
511 7 0.00
512 6 0.00
514 4 0.00
515 2 0.00
516 2 0.00
517 3 0.00
518 3 0.00
519 3 0.00
520 2 0.00
521 8 0.00
522 8 0.00
523 8 0.00
524 22 0.00
525 9 0.00
526 11 0.00
527 8 0.00
528 4 0.00
529 3 0.00
530 4 0.00
531 2 0.00
533 5 0.00
535 2 0.00
536 2 0.00
537 10 0.00
538 9 0.00
539 4 0.00
541 5 0.00
542 2 0.00
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (431 bp):
ACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTCTGGTTCTTGGC
CGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAATTTGTTTCCTTAAAGTATTCAAG
ACGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGGGAAATCGCATCATTTGCTCCA
AATAGTTTGTCATTTTGTAAACAACTTTTTGTATTTGAATTAAAAACTTATTTACGTGAGAATTG
TTTCTTTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATAACTT
TGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCTATGCTCGG
AAAATCGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAA
Found at i:38171305 original size:28 final size:28
Alignment explanation
Indices: 38171218--38171364 Score: 123
Period size: 28 Copynumber: 5.2 Consensus size: 28
38171208 GTTTGAGAAC
* **
38171218 TACTCTGAATTCTGGCTTATAAGAGCAT
1 TACTCTGTATTCTGGCTCGTAAGAGCAT
* * *
38171246 TAATCTGTATTTTGGCTCGTAAGAGCAC
1 TACTCTGTATTCTGGCTCGTAAGAGCAT
38171274 TACTCTGTATTCTGGCTCGTAAGAGCAT
1 TACTCTGTATTCTGGCTCGTAAGAGCAT
* * * * * * **
38171302 TACTTTGAACTCTAGATCGAAAGAGTGT
1 TACTCTGTATTCTGGCTCGTAAGAGCAT
* * * *
38171330 TATTCTGTATTCTGGCTTGAAAGAGTAT
1 TACTCTGTATTCTGGCTCGTAAGAGCAT
*
38171358 TATTCTG
1 TACTCTG
38171365 GATCTAGCTC
Statistics
Matches: 94, Mismatches: 25, Indels: 0
0.79 0.21 0.00
Matches are distributed among these distances:
28 94 1.00
ACGTcount: A:0.26, C:0.16, G:0.20, T:0.37
Consensus pattern (28 bp):
TACTCTGTATTCTGGCTCGTAAGAGCAT
Found at i:38172692 original size:27 final size:26
Alignment explanation
Indices: 38172602--38172672 Score: 115
Period size: 26 Copynumber: 2.7 Consensus size: 26
38172592 AAGATTGTTA
*
38172602 AAATTGTTCTAAAAGAAAACTCAAGAG
1 AAATTCTT-TAAAAGAAAACTCAAGAG
*
38172629 AAATTTTTTAAAAGAAAACTCAAGAG
1 AAATTCTTTAAAAGAAAACTCAAGAG
38172655 AAATTCTTTAAAAGAAAA
1 AAATTCTTTAAAAGAAAA
38172673 ACCCAAAGAG
Statistics
Matches: 42, Mismatches: 2, Indels: 1
0.93 0.04 0.02
Matches are distributed among these distances:
26 35 0.83
27 7 0.17
ACGTcount: A:0.55, C:0.08, G:0.11, T:0.25
Consensus pattern (26 bp):
AAATTCTTTAAAAGAAAACTCAAGAG
Found at i:38174534 original size:15 final size:16
Alignment explanation
Indices: 38174514--38174546 Score: 50
Period size: 16 Copynumber: 2.1 Consensus size: 16
38174504 GTGACCTTCC
*
38174514 TTTCAG-TTTTTTCTT
1 TTTCAGATTTTTGCTT
38174529 TTTCAGATTTTTGCTT
1 TTTCAGATTTTTGCTT
38174545 TT
1 TT
38174547 CTTTTTAATA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
15 6 0.38
16 10 0.62
ACGTcount: A:0.09, C:0.12, G:0.09, T:0.70
Consensus pattern (16 bp):
TTTCAGATTTTTGCTT
Found at i:38177453 original size:13 final size:14
Alignment explanation
Indices: 38177432--38177468 Score: 51
Period size: 13 Copynumber: 2.8 Consensus size: 14
38177422 AAACCCTATC
38177432 AGAAAATAAAAG-A
1 AGAAAATAAAAGAA
*
38177445 AGCAAAT-AAAGAA
1 AGAAAATAAAAGAA
38177458 AGAAAATAAAA
1 AGAAAATAAAA
38177469 TCTAAACATC
Statistics
Matches: 20, Mismatches: 2, Indels: 3
0.80 0.08 0.12
Matches are distributed among these distances:
12 4 0.20
13 13 0.65
14 3 0.15
ACGTcount: A:0.76, C:0.03, G:0.14, T:0.08
Consensus pattern (14 bp):
AGAAAATAAAAGAA
Found at i:38187280 original size:6 final size:6
Alignment explanation
Indices: 38187269--38187301 Score: 57
Period size: 6 Copynumber: 5.3 Consensus size: 6
38187259 ATTTACAAAA
38187269 ATAAAT ATAAAT ATAAAT ATAAAT ATATAAT AT
1 ATAAAT ATAAAT ATAAAT ATAAAT ATA-AAT AT
38187302 TAAGTTTATA
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
6 21 0.81
7 5 0.19
ACGTcount: A:0.64, C:0.00, G:0.00, T:0.36
Consensus pattern (6 bp):
ATAAAT
Found at i:38190600 original size:89 final size:89
Alignment explanation
Indices: 38190449--38190632 Score: 323
Period size: 89 Copynumber: 2.1 Consensus size: 89
38190439 AGAATTAAGT
*
38190449 AAGAATCAAAGTAATCTAACATTGAAAGATACTTCCATATACAATCAATTGTCAATAAAATTCAT
1 AAGAATCAAAATAATCTAACATTGAAAGATACTTCCATATACAATCAATTGTCAATAAAATTCAT
*
38190514 CAACATTAAAAGAGGGATTAACAA
66 CAACATTAAAAGAGAGATTAACAA
38190538 AAGAATCAAAATAATCTAACATTGAAAGATACTTCCATATACAATCAATTGTCAATAAAATTCAT
1 AAGAATCAAAATAATCTAACATTGAAAGATACTTCCATATACAATCAATTGTCAATAAAATTCAT
* *
38190603 CAGCATTAAAAGAGAGATTAATAA
66 CAACATTAAAAGAGAGATTAACAA
*
38190627 ATGAAT
1 AAGAAT
38190633 TGAAGCATGC
Statistics
Matches: 90, Mismatches: 5, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
89 90 1.00
ACGTcount: A:0.50, C:0.14, G:0.10, T:0.27
Consensus pattern (89 bp):
AAGAATCAAAATAATCTAACATTGAAAGATACTTCCATATACAATCAATTGTCAATAAAATTCAT
CAACATTAAAAGAGAGATTAACAA
Found at i:38197445 original size:89 final size:86
Alignment explanation
Indices: 38197352--38197514 Score: 200
Period size: 86 Copynumber: 1.9 Consensus size: 86
38197342 TTTGTCGAGA
* * * * *
38197352 AAAAAAAGGCTAAGAAGAAAAAAATATATTTTAATTGATGTTATCAATGTGTTAGGTGACATTGG
1 AAAAAAAGGCTAAGAAG-AAAAAACA-A-TTTAAGTGATGTCATCAATGTGTGAGGTGACATTAG
38197417 TGGTATTTAAAAAAAGGGAGTCAT
63 TGGTATTTAAAAAAAGGGAGTCAT
* * * * * *
38197441 AAAAAAAGGTTGAGAAGAGAAAACAATTTAAGTGGTGTCGTCGATGTGTGAGGTGACATTAGTGG
1 AAAAAAAGGCTAAGAAGAAAAAACAATTTAAGTGATGTCATCAATGTGTGAGGTGACATTAGTGG
38197506 TATTTAAAA
66 TATTTAAAA
38197515 TAGGTACTGT
Statistics
Matches: 63, Mismatches: 11, Indels: 3
0.82 0.14 0.04
Matches are distributed among these distances:
86 41 0.65
87 1 0.02
88 6 0.10
89 15 0.24
ACGTcount: A:0.42, C:0.05, G:0.25, T:0.29
Consensus pattern (86 bp):
AAAAAAAGGCTAAGAAGAAAAAACAATTTAAGTGATGTCATCAATGTGTGAGGTGACATTAGTGG
TATTTAAAAAAAGGGAGTCAT
Found at i:38199623 original size:24 final size:21
Alignment explanation
Indices: 38199563--38199630 Score: 75
Period size: 21 Copynumber: 3.1 Consensus size: 21
38199553 CTCACAAAGA
*
38199563 AAAAAG-GAAGTGAGTTAGAC
1 AAAAAGAGAAGTGACTTAGAC
* *
38199583 AAAAAGAGAAGTAACTTGGAC
1 AAAAAGAGAAGTGACTTAGAC
38199604 AAAAAGAAACGAAGTGACTTAGAC
1 AAAAAG--A-GAAGTGACTTAGAC
38199628 AAA
1 AAA
38199631 TCTTTTTTGT
Statistics
Matches: 39, Mismatches: 5, Indels: 4
0.81 0.10 0.08
Matches are distributed among these distances:
20 6 0.15
21 17 0.44
23 1 0.03
24 15 0.38
ACGTcount: A:0.54, C:0.09, G:0.24, T:0.13
Consensus pattern (21 bp):
AAAAAGAGAAGTGACTTAGAC
Found at i:38201188 original size:26 final size:26
Alignment explanation
Indices: 38201159--38201210 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
38201149 CGCTATGAGT
38201159 ATGTTTCTTGGATTATTATGTAACAG
1 ATGTTTCTTGGATTATTATGTAACAG
38201185 ATGTTTCTTGGATTATTATGTAACAG
1 ATGTTTCTTGGATTATTATGTAACAG
38201211 TCATAACATT
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.08, G:0.19, T:0.46
Consensus pattern (26 bp):
ATGTTTCTTGGATTATTATGTAACAG
Found at i:38210222 original size:10 final size:9
Alignment explanation
Indices: 38210202--38210226 Score: 50
Period size: 9 Copynumber: 2.8 Consensus size: 9
38210192 ACGTCAAACT
38210202 AAAATAAAA
1 AAAATAAAA
38210211 AAAATAAAA
1 AAAATAAAA
38210220 AAAATAA
1 AAAATAA
38210227 GTTAAATAAA
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 16 1.00
ACGTcount: A:0.88, C:0.00, G:0.00, T:0.12
Consensus pattern (9 bp):
AAAATAAAA
Found at i:38227077 original size:21 final size:22
Alignment explanation
Indices: 38227051--38227092 Score: 59
Period size: 21 Copynumber: 2.0 Consensus size: 22
38227041 AATCAAAAAG
38227051 AAAAGAAAAATGAGT-AGAAAC
1 AAAAGAAAAATGAGTAAGAAAC
**
38227072 AAAAGAATCATGAGTAAGAAA
1 AAAAGAAAAATGAGTAAGAAA
38227093 ATATGTGAAT
Statistics
Matches: 18, Mismatches: 2, Indels: 1
0.86 0.10 0.05
Matches are distributed among these distances:
21 13 0.72
22 5 0.28
ACGTcount: A:0.64, C:0.05, G:0.19, T:0.12
Consensus pattern (22 bp):
AAAAGAAAAATGAGTAAGAAAC
Found at i:38228939 original size:12 final size:12
Alignment explanation
Indices: 38228909--38228941 Score: 50
Period size: 11 Copynumber: 2.8 Consensus size: 12
38228899 AATCATCTTG
38228909 CTTTTATTTTCT
1 CTTTTATTTTCT
*
38228921 -ATTTATTTTCT
1 CTTTTATTTTCT
38228932 CTTTTATTTT
1 CTTTTATTTT
38228942 ATGCTTTAAA
Statistics
Matches: 18, Mismatches: 2, Indels: 2
0.82 0.09 0.09
Matches are distributed among these distances:
11 10 0.56
12 8 0.44
ACGTcount: A:0.12, C:0.12, G:0.00, T:0.76
Consensus pattern (12 bp):
CTTTTATTTTCT
Found at i:38232425 original size:21 final size:21
Alignment explanation
Indices: 38232408--38232447 Score: 64
Period size: 21 Copynumber: 2.0 Consensus size: 21
38232398 AGCAAAAGCA
38232408 AAAAC-AAAATAATGAAAAAC
1 AAAACAAAAATAATGAAAAAC
*
38232428 AAAGCAAAAATAATGAAAAA
1 AAAACAAAAATAATGAAAAA
38232448 TTCCCATGTT
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
20 4 0.22
21 14 0.78
ACGTcount: A:0.75, C:0.07, G:0.07, T:0.10
Consensus pattern (21 bp):
AAAACAAAAATAATGAAAAAC
Found at i:38232749 original size:20 final size:20
Alignment explanation
Indices: 38232724--38232761 Score: 67
Period size: 20 Copynumber: 1.9 Consensus size: 20
38232714 CCAAATTACG
38232724 AGTCTTTTAAATAAAAATAA
1 AGTCTTTTAAATAAAAATAA
*
38232744 AGTCTTTTAACTAAAAAT
1 AGTCTTTTAAATAAAAAT
38232762 TTAAAATGGT
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
20 17 1.00
ACGTcount: A:0.50, C:0.08, G:0.05, T:0.37
Consensus pattern (20 bp):
AGTCTTTTAAATAAAAATAA
Found at i:38243569 original size:107 final size:107
Alignment explanation
Indices: 38243383--38243588 Score: 340
Period size: 107 Copynumber: 1.9 Consensus size: 107
38243373 AGGCCAAATT
* *
38243383 AAGAGGATTTCTATGAACCAAGTGAAATGGAGAGTGATCAATCCTCCAACCGAAGTTTGAGACAT
1 AAGAGGATTTCTATGAACCAAGTGAAATAGAGAGTGATCAATCCTCCAACCGAAGTTTGAGACAC
* *
38243448 CGAGGTTAACGAAATCAAGGTCTAAGGATAGATGATATAATC
66 CGAGGTCAACGAAATCAAGGTCCAAGGATAGATGATATAATC
*
38243490 AAGAGGATTTCTATGAACCAAGTGAAATAGAGAGTGATCAATCCTCCAACCGAAGTTTGAGACGC
1 AAGAGGATTTCTATGAACCAAGTGAAATAGAGAGTGATCAATCCTCCAACCGAAGTTTGAGACAC
** *
38243555 CGAGGTCAACGAAATCGGGGTCCGAGGATAGATG
66 CGAGGTCAACGAAATCAAGGTCCAAGGATAGATG
38243589 GTAATCTTTA
Statistics
Matches: 91, Mismatches: 8, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
107 91 1.00
ACGTcount: A:0.36, C:0.17, G:0.26, T:0.21
Consensus pattern (107 bp):
AAGAGGATTTCTATGAACCAAGTGAAATAGAGAGTGATCAATCCTCCAACCGAAGTTTGAGACAC
CGAGGTCAACGAAATCAAGGTCCAAGGATAGATGATATAATC
Found at i:38244997 original size:20 final size:22
Alignment explanation
Indices: 38244974--38245013 Score: 66
Period size: 20 Copynumber: 1.9 Consensus size: 22
38244964 GAGAAAAATT
38244974 AGAAAAT-GCAAAA-AAAAGAG
1 AGAAAATAGCAAAAGAAAAGAG
38244994 AGAAAATAGCAAAAGAAAAG
1 AGAAAATAGCAAAAGAAAAG
38245014 CAAAAGAAAA
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
20 7 0.39
21 6 0.33
22 5 0.28
ACGTcount: A:0.70, C:0.05, G:0.20, T:0.05
Consensus pattern (22 bp):
AGAAAATAGCAAAAGAAAAGAG
Found at i:38251192 original size:18 final size:18
Alignment explanation
Indices: 38251161--38251213 Score: 58
Period size: 17 Copynumber: 3.1 Consensus size: 18
38251151 AAAAGTGATC
*
38251161 AAAAAAGTACAGAAAAA-
1 AAAAAAATACAGAAAAAT
*
38251178 AGAAAAATACGAGAAAAAT
1 AAAAAAATAC-AGAAAAAT
38251197 AAAAAAATA-A-AAAAAT
1 AAAAAAATACAGAAAAAT
38251213 A
1 A
38251214 TTTTATGGGT
Statistics
Matches: 31, Mismatches: 3, Indels: 5
0.79 0.08 0.13
Matches are distributed among these distances:
16 7 0.23
17 9 0.29
18 7 0.23
19 8 0.26
ACGTcount: A:0.77, C:0.04, G:0.09, T:0.09
Consensus pattern (18 bp):
AAAAAAATACAGAAAAAT
Found at i:38259163 original size:52 final size:52
Alignment explanation
Indices: 38259080--38259421 Score: 440
Period size: 52 Copynumber: 6.6 Consensus size: 52
38259070 AGTGAAAAAG
* * * * *
38259080 GGTCCGATGATTACGTGTCATTGTGAGTATATGAATTCTTTATGAATTATGA
1 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGAATTATGA
* * *
38259132 GGTCTGATGACTACGTGTCATCGTCAGTATATGAATCATTTACGGATTATGA
1 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGAATTATGA
* *
38259184 GGT-TCGATGACTACGTGTCATCGTGAGTATATGAATCCTTTATGGATTATGA
1 GGTCT-GATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGAATTATGA
*
38259236 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGGATTATGA
1 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGAATTATGA
* * * *
38259288 GGTCCGATGACTATGTGTCATCATTAGTATATGAATCCTTTACGGAA-TATGA
1 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTAC-GAATTATGA
* * * *
38259340 GGTCCGATGACTACGTGTCATTGTGAGTATACGAATCCTTTAC-AGATTATAA
1 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGA-ATTATGA
*
38259392 GGT-TCGATGACTATGTGTCATCGTGAGTAT
1 GGTCT-GATGACTACGTGTCATCGTGAGTAT
38259422 TAAACGAAAT
Statistics
Matches: 258, Mismatches: 26, Indels: 12
0.87 0.09 0.04
Matches are distributed among these distances:
50 1 0.00
51 2 0.01
52 252 0.98
53 3 0.01
ACGTcount: A:0.26, C:0.14, G:0.24, T:0.36
Consensus pattern (52 bp):
GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGAATTATGA
Found at i:38259265 original size:104 final size:104
Alignment explanation
Indices: 38259084--38259421 Score: 514
Period size: 104 Copynumber: 3.2 Consensus size: 104
38259074 AAAAAGGGTC
* * * *
38259084 CGATGATTACGTGTCATTGTGAGTATATGAATTCTTTATGAATTATGAGGTCTGATGACTACGTG
1 CGATGACTACGTGTCATCGTGAGTATATGAATCCTTTATGGATTATGAGGTCTGATGACTACGTG
* *
38259149 TCATCGTCAGTATATGAATCATTTACGGATTATGAGGTT
66 TCATCGTGAGTATATGAATCCTTTACGGATTATGAGGTT
38259188 CGATGACTACGTGTCATCGTGAGTATATGAATCCTTTATGGATTATGAGGTCTGATGACTACGTG
1 CGATGACTACGTGTCATCGTGAGTATATGAATCCTTTATGGATTATGAGGTCTGATGACTACGTG
*
38259253 TCATCGTGAGTATATGAATCCTTTACGGATTATGAGGTC
66 TCATCGTGAGTATATGAATCCTTTACGGATTATGAGGTT
* * * * * *
38259292 CGATGACTATGTGTCATCATTAGTATATGAATCCTTTACGGAATATGAGGTCCGATGACTACGTG
1 CGATGACTACGTGTCATCGTGAGTATATGAATCCTTTATGGATTATGAGGTCTGATGACTACGTG
* * * *
38259357 TCATTGTGAGTATACGAATCCTTTACAGATTATAAGGTT
66 TCATCGTGAGTATATGAATCCTTTACGGATTATGAGGTT
*
38259396 CGATGACTATGTGTCATCGTGAGTAT
1 CGATGACTACGTGTCATCGTGAGTAT
38259422 TAAACGAAAT
Statistics
Matches: 214, Mismatches: 20, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
104 214 1.00
ACGTcount: A:0.27, C:0.14, G:0.23, T:0.36
Consensus pattern (104 bp):
CGATGACTACGTGTCATCGTGAGTATATGAATCCTTTATGGATTATGAGGTCTGATGACTACGTG
TCATCGTGAGTATATGAATCCTTTACGGATTATGAGGTT
Found at i:38259369 original size:156 final size:156
Alignment explanation
Indices: 38259080--38259421 Score: 497
Period size: 156 Copynumber: 2.2 Consensus size: 156
38259070 AGTGAAAAAG
* * * * * *
38259080 GGTCCGATGATTACGTGTCATTGTGAGTATATGAATTCTTTATGAATTATGAGGTCTGATGACTA
1 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGAATTATGAGGTCCGATGACTA
* * *
38259145 CGTGTCATCGTCAGTATATGAATCATTTACGGATTATGAGGTTCGATGACTACGTGTCATCGTGA
66 CGTGTCATCATCAGTATATGAATCATTTACGGAATATGAGGTCCGATGACTACGTGTCATCGTGA
* ** *
38259210 GTATATGAATCCTTTATGGATTATGA
131 GTATACGAATCCTTTACAGATTATAA
*
38259236 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGGATTATGAGGTCCGATGACTA
1 GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGAATTATGAGGTCCGATGACTA
* * * *
38259301 TGTGTCATCATTAGTATATGAATCCTTTACGGAATATGAGGTCCGATGACTACGTGTCATTGTGA
66 CGTGTCATCATCAGTATATGAATCATTTACGGAATATGAGGTCCGATGACTACGTGTCATCGTGA
38259366 GTATACGAATCCTTTACAGATTATAA
131 GTATACGAATCCTTTACAGATTATAA
*
38259392 GGT-TCGATGACTATGTGTCATCGTGAGTAT
1 GGTCT-GATGACTACGTGTCATCGTGAGTAT
38259422 TAAACGAAAT
Statistics
Matches: 166, Mismatches: 19, Indels: 2
0.89 0.10 0.01
Matches are distributed among these distances:
155 1 0.01
156 165 0.99
ACGTcount: A:0.26, C:0.14, G:0.24, T:0.36
Consensus pattern (156 bp):
GGTCTGATGACTACGTGTCATCGTGAGTATATGAATCCTTTACGAATTATGAGGTCCGATGACTA
CGTGTCATCATCAGTATATGAATCATTTACGGAATATGAGGTCCGATGACTACGTGTCATCGTGA
GTATACGAATCCTTTACAGATTATAA
Found at i:38259996 original size:24 final size:24
Alignment explanation
Indices: 38259963--38260010 Score: 71
Period size: 24 Copynumber: 2.0 Consensus size: 24
38259953 CAGTAGTTGA
38259963 TTAGCAAGTATCGGTAATTATGTGT
1 TTAGCAAGTATCGGTAATT-TGTGT
*
38259988 TTAG-AAGTATCGGTAGTTTGTGT
1 TTAGCAAGTATCGGTAATTTGTGT
38260011 ACTTGTATTG
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
23 5 0.23
24 13 0.59
25 4 0.18
ACGTcount: A:0.25, C:0.06, G:0.27, T:0.42
Consensus pattern (24 bp):
TTAGCAAGTATCGGTAATTTGTGT
Found at i:38260090 original size:21 final size:21
Alignment explanation
Indices: 38260064--38260116 Score: 70
Period size: 21 Copynumber: 2.5 Consensus size: 21
38260054 GGAGTTTTTA
*
38260064 GTATCGGTAGAATTAAGACTT
1 GTATCGGTAGAATTAACACTT
**
38260085 GTATCGGTAGAATTGTCACTT
1 GTATCGGTAGAATTAACACTT
*
38260106 GTATCAGTAGA
1 GTATCGGTAGA
38260117 GGTCTACACT
Statistics
Matches: 28, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
21 28 1.00
ACGTcount: A:0.30, C:0.11, G:0.25, T:0.34
Consensus pattern (21 bp):
GTATCGGTAGAATTAACACTT
Found at i:38273468 original size:41 final size:41
Alignment explanation
Indices: 38273403--38273489 Score: 156
Period size: 41 Copynumber: 2.1 Consensus size: 41
38273393 GAAAAGCGCT
38273403 TCCACGTGGAAGCACTTTTCCTTGAATGAGACAAAAATGCC
1 TCCACGTGGAAGCACTTTTCCTTGAATGAGACAAAAATGCC
* *
38273444 TCCATGTGGAAGCACTTTTTCTTGAATGAGACAAAAATGCC
1 TCCACGTGGAAGCACTTTTCCTTGAATGAGACAAAAATGCC
38273485 TCCAC
1 TCCAC
38273490 ATAGGAGCCT
Statistics
Matches: 43, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
41 43 1.00
ACGTcount: A:0.31, C:0.24, G:0.18, T:0.26
Consensus pattern (41 bp):
TCCACGTGGAAGCACTTTTCCTTGAATGAGACAAAAATGCC
Found at i:38273509 original size:41 final size:42
Alignment explanation
Indices: 38273403--38273518 Score: 150
Period size: 41 Copynumber: 2.8 Consensus size: 42
38273393 GAAAAGCGCT
*
38273403 TCCACGTGGAAGCAC-TTTTCCTTGAATGAGACAAAAATGCC
1 TCCACATGGAAGCACTTTTTCCTTGAATGAGACAAAAATGCC
**
38273444 TCCATGTGGAAGCACTTTTT-CTTGAATGAGACAAAAATGCC
1 TCCACATGGAAGCACTTTTTCCTTGAATGAGACAAAAATGCC
* *
38273485 TCCACATAGG-AGC-CTTTTTCCTTGACTAAGACAA
1 TCCACAT-GGAAGCACTTTTTCCTTGAATGAGACAA
38273519 GAACACGCTA
Statistics
Matches: 67, Mismatches: 5, Indels: 6
0.86 0.06 0.08
Matches are distributed among these distances:
40 6 0.09
41 55 0.82
42 6 0.09
ACGTcount: A:0.31, C:0.23, G:0.18, T:0.28
Consensus pattern (42 bp):
TCCACATGGAAGCACTTTTTCCTTGAATGAGACAAAAATGCC
Found at i:38277115 original size:22 final size:21
Alignment explanation
Indices: 38277072--38277111 Score: 64
Period size: 21 Copynumber: 1.9 Consensus size: 21
38277062 TTATTGGTTT
38277072 ATTTGAAAAGTAAAGATTCAA
1 ATTTGAAAAGTAAAGATTCAA
38277093 ATTTGAAAACGTAAA-ATTC
1 ATTTGAAAA-GTAAAGATTC
38277112 CAAACAATTT
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
21 13 0.72
22 5 0.28
ACGTcount: A:0.50, C:0.07, G:0.12, T:0.30
Consensus pattern (21 bp):
ATTTGAAAAGTAAAGATTCAA
Found at i:38281394 original size:39 final size:39
Alignment explanation
Indices: 38281349--38281425 Score: 154
Period size: 39 Copynumber: 2.0 Consensus size: 39
38281339 TACTTTAAAA
38281349 TAAATAAGTAAACAAATAAATAGATAAGATGCCATGAAC
1 TAAATAAGTAAACAAATAAATAGATAAGATGCCATGAAC
38281388 TAAATAAGTAAACAAATAAATAGATAAGATGCCATGAA
1 TAAATAAGTAAACAAATAAATAGATAAGATGCCATGAA
38281426 ATTCCAGAGT
Statistics
Matches: 38, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
39 38 1.00
ACGTcount: A:0.57, C:0.09, G:0.13, T:0.21
Consensus pattern (39 bp):
TAAATAAGTAAACAAATAAATAGATAAGATGCCATGAAC
Found at i:38289332 original size:23 final size:23
Alignment explanation
Indices: 38289302--38289468 Score: 271
Period size: 23 Copynumber: 7.3 Consensus size: 23
38289292 TATATCTATA
*
38289302 CTTAAATATTAATGTGGTTTGTG
1 CTTAAATATTAATGTGATTTGTG
38289325 CTTAAATATTAATGTGATTTGTG
1 CTTAAATATTAATGTGATTTGTG
*
38289348 CTTAAATATTAATGTGATGTGTG
1 CTTAAATATTAATGTGATTTGTG
* *
38289371 CTCAAATATTAATGTGGTTTGTG
1 CTTAAATATTAATGTGATTTGTG
38289394 CTTAAATATTAATGTGATTTGTG
1 CTTAAATATTAATGTGATTTGTG
* *
38289417 CTTAAATATTAATATGATTTATG
1 CTTAAATATTAATGTGATTTGTG
*
38289440 ATTAAATATTAATGTGATTTGTG
1 CTTAAATATTAATGTGATTTGTG
38289463 CTTAAA
1 CTTAAA
38289469 GAATTAAGAT
Statistics
Matches: 131, Mismatches: 13, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
23 131 1.00
ACGTcount: A:0.32, C:0.05, G:0.17, T:0.46
Consensus pattern (23 bp):
CTTAAATATTAATGTGATTTGTG
Found at i:38289601 original size:36 final size:36
Alignment explanation
Indices: 38289549--38289651 Score: 161
Period size: 36 Copynumber: 2.9 Consensus size: 36
38289539 TATGAAAGTG
* *
38289549 AATATTTGGGTATATTCTTCATTCCATGTGACAGAA
1 AATATGTGGGTATATTCTTCATGCCATGTGACAGAA
* *
38289585 AATATGTGGGTTTATTCTTCATGCCATGTGACAGAG
1 AATATGTGGGTATATTCTTCATGCCATGTGACAGAA
*
38289621 AATATGTGGGTATGTTCTTCATGCCATGTGA
1 AATATGTGGGTATATTCTTCATGCCATGTGA
38289652 TTGATTATAT
Statistics
Matches: 61, Mismatches: 6, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
36 61 1.00
ACGTcount: A:0.26, C:0.14, G:0.22, T:0.38
Consensus pattern (36 bp):
AATATGTGGGTATATTCTTCATGCCATGTGACAGAA
Found at i:38291768 original size:24 final size:24
Alignment explanation
Indices: 38291741--38291815 Score: 60
Period size: 24 Copynumber: 3.1 Consensus size: 24
38291731 TTTACCCTTA
* *
38291741 TCAAAGTATAAACGTTTACTCTCG
1 TCAAAGTACAAACGTTTACGCTCG
** *
38291765 TCAACTTGCAAACGTTTACGCTCG
1 TCAAAGTACAAACGTTTACGCTCG
** * * *
38291789 TCAACTTTCACACGTTTACACTCG
1 TCAAAGTACAAACGTTTACGCTCG
38291813 TCA
1 TCA
38291816 GCTTATTTAC
Statistics
Matches: 43, Mismatches: 8, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
24 43 1.00
ACGTcount: A:0.28, C:0.28, G:0.12, T:0.32
Consensus pattern (24 bp):
TCAAAGTACAAACGTTTACGCTCG
Found at i:38291804 original size:48 final size:48
Alignment explanation
Indices: 38291752--38292129 Score: 315
Period size: 48 Copynumber: 7.7 Consensus size: 48
38291742 CAAAGTATAA
* * * * * *
38291752 ACGTTTACTCTCGTCAACTTGCAAACGTTTACGCTCGTCAACTTTCAC
1 ACGTTTACGCTCGTCAGCTTACACACGTTTACGCTCGTCAGCTTGCAC
* *** *
38291800 ACGTTTACACTCGTCAGCTTATTTACGTTTATGCTCGTCAGCTTGCAC
1 ACGTTTACGCTCGTCAGCTTACACACGTTTACGCTCGTCAGCTTGCAC
* * * * * ** *
38291848 ACATTTACGCTCATCAGCTTGCACACATTTACGCTCATCAGCTTATAT
1 ACGTTTACGCTCGTCAGCTTACACACGTTTACGCTCGTCAGCTTGCAC
* * * * * *
38291896 ACGTTTACACTCGTCAGCTTGCACACGTTTACACTCGTCAGCCTGTAT
1 ACGTTTACGCTCGTCAGCTTACACACGTTTACGCTCGTCAGCTTGCAC
* * * *
38291944 ACGTTTACGCTCGTCAGCCTGCACACGTTCACACGTTTATATGCTCATCAACTTGCAC
1 ACGTTTACGCTCGTCAG-CT-------TACACACG-TT-TACGCTCGTCAGCTTGCAC
* * * * *
38292002 ACGTTTATGCTCGTCAGCTTATATACGTTTAAGCTTGTCAGCTTGCAC
1 ACGTTTACGCTCGTCAGCTTACACACGTTTACGCTCGTCAGCTTGCAC
* * *
38292050 ACGTTTACGCTCGTCAGCTTATATACGTTTACCCTCGTCAGCTTGCAC
1 ACGTTTACGCTCGTCAGCTTACACACGTTTACGCTCGTCAGCTTGCAC
* *
38292098 ACGTTTACGCTCGTCAGCTTATATACGTTTAC
1 ACGTTTACGCTCGTCAGCTTACACACGTTTAC
38292130 TTAATTCAAC
Statistics
Matches: 269, Mismatches: 51, Indels: 20
0.79 0.15 0.06
Matches are distributed among these distances:
48 221 0.82
49 4 0.01
50 5 0.02
56 7 0.03
57 4 0.01
58 28 0.10
ACGTcount: A:0.22, C:0.29, G:0.15, T:0.34
Consensus pattern (48 bp):
ACGTTTACGCTCGTCAGCTTACACACGTTTACGCTCGTCAGCTTGCAC
Found at i:38291827 original size:24 final size:24
Alignment explanation
Indices: 38291752--38291972 Score: 226
Period size: 24 Copynumber: 9.2 Consensus size: 24
38291742 CAAAGTATAA
* * *
38291752 ACGTTTACTCTCGTCAACTTGCAA
1 ACGTTTACGCTCGTCAGCTTGCAC
* *
38291776 ACGTTTACGCTCGTCAACTTTCAC
1 ACGTTTACGCTCGTCAGCTTGCAC
* ****
38291800 ACGTTTACACTCGTCAGCTTATTT
1 ACGTTTACGCTCGTCAGCTTGCAC
*
38291824 ACGTTTATGCTCGTCAGCTTGCAC
1 ACGTTTACGCTCGTCAGCTTGCAC
* *
38291848 ACATTTACGCTCATCAGCTTGCAC
1 ACGTTTACGCTCGTCAGCTTGCAC
* * ** *
38291872 ACATTTACGCTCATCAGCTTATAT
1 ACGTTTACGCTCGTCAGCTTGCAC
*
38291896 ACGTTTACACTCGTCAGCTTGCAC
1 ACGTTTACGCTCGTCAGCTTGCAC
* * * *
38291920 ACGTTTACACTCGTCAGCCTGTAT
1 ACGTTTACGCTCGTCAGCTTGCAC
*
38291944 ACGTTTACGCTCGTCAGCCTGCAC
1 ACGTTTACGCTCGTCAGCTTGCAC
38291968 ACGTT
1 ACGTT
38291973 CACACGTTTA
Statistics
Matches: 164, Mismatches: 33, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
24 164 1.00
ACGTcount: A:0.22, C:0.30, G:0.15, T:0.33
Consensus pattern (24 bp):
ACGTTTACGCTCGTCAGCTTGCAC
Found at i:38291837 original size:72 final size:72
Alignment explanation
Indices: 38291747--38292128 Score: 329
Period size: 72 Copynumber: 5.2 Consensus size: 72
38291737 CTTATCAAAG
* * * * *
38291747 TATAAACGTTTACT-CTCGTCAACTTGCAAACGTTTACGCTCGTCAACTTTCACACGTTTACACT
1 TATATACGTTTA-TGCTCGTCAGCTTGCACACGTTTACGCTCGTCAGCTTTCACACGTTTACGCT
38291811 CGTCAGCT
65 CGTCAGCT
* * * * *
38291819 TATTTACGTTTATGCTCGTCAGCTTGCACACATTTACGCTCATCAGCTTGCACACATTTACGCTC
1 TATATACGTTTATGCTCGTCAGCTTGCACACGTTTACGCTCGTCAGCTTTCACACGTTTACGCTC
*
38291884 ATCAGCT
66 GTCAGCT
** * * *
38291891 TATATACGTTTACACTCGTCAGCTTGCACACGTTTACACTCGTCAGCCTGT-ATACGTTTACGCT
1 TATATACGTTTATGCTCGTCAGCTTGCACACGTTTACGCTCGTCAG-CTTTCACACGTTTACGCT
38291955 CGTCAGCCT
65 CGTCAG-CT
* * * * * *
38291964 GCACACGTTCACACGTTTATATGCTCATCAACTTGCACACGTTTATGCTCGTCAGCTTAT-ATAC
1 ---TA---T-ATACG-TT-TATGCTCGTCAGCTTGCACACGTTTACGCTCGTCAGCTT-TCACAC
* *
38292028 GTTTAAGCTTGTCAGCT
56 GTTTACGCTCGTCAGCT
** * * ** * * *
38292045 TGCACACGTTTACGCTCGTCAGCTTATATACGTTTACCCTCGTCAGCTTGCACACGTTTACGCTC
1 TATATACGTTTATGCTCGTCAGCTTGCACACGTTTACGCTCGTCAGCTTTCACACGTTTACGCTC
38292110 GTCAGCT
66 GTCAGCT
38292117 TATATACGTTTA
1 TATATACGTTTA
38292129 CTTAATTCAA
Statistics
Matches: 245, Mismatches: 51, Indels: 28
0.76 0.16 0.09
Matches are distributed among these distances:
71 1 0.00
72 173 0.71
73 6 0.02
74 5 0.02
76 1 0.00
79 1 0.00
80 4 0.02
81 6 0.02
82 48 0.20
ACGTcount: A:0.22, C:0.29, G:0.15, T:0.34
Consensus pattern (72 bp):
TATATACGTTTATGCTCGTCAGCTTGCACACGTTTACGCTCGTCAGCTTTCACACGTTTACGCTC
GTCAGCT
Found at i:38292029 original size:24 final size:24
Alignment explanation
Indices: 38292002--38292129 Score: 166
Period size: 24 Copynumber: 5.3 Consensus size: 24
38291992 CAACTTGCAC
*
38292002 ACGTTTATGCTCGTCAGCTTATAT
1 ACGTTTACGCTCGTCAGCTTATAT
* * ** *
38292026 ACGTTTAAGCTTGTCAGCTTGCAC
1 ACGTTTACGCTCGTCAGCTTATAT
38292050 ACGTTTACGCTCGTCAGCTTATAT
1 ACGTTTACGCTCGTCAGCTTATAT
* ** *
38292074 ACGTTTACCCTCGTCAGCTTGCAC
1 ACGTTTACGCTCGTCAGCTTATAT
38292098 ACGTTTACGCTCGTCAGCTTATAT
1 ACGTTTACGCTCGTCAGCTTATAT
38292122 ACGTTTAC
1 ACGTTTAC
38292130 TTAATTCAAC
Statistics
Matches: 86, Mismatches: 18, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
24 86 1.00
ACGTcount: A:0.20, C:0.27, G:0.17, T:0.36
Consensus pattern (24 bp):
ACGTTTACGCTCGTCAGCTTATAT
Found at i:38294404 original size:759 final size:759
Alignment explanation
Indices: 38292944--38299780 Score: 13404
Period size: 759 Copynumber: 9.0 Consensus size: 759
38292934 TTTTGTTCCA
38292944 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
*
38293009 ATTCATTCTTTGCTCATGAAAAGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
* *
38293074 CAAATTGTGCTTTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATATCACCATTGTT
131 CAAATTGTGC--TTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGAT
38293139 TCTCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTC
194 TCTCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTC
*
38293204 CTAGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCATAAAATCCGCAAGGATGATGA
259 CTAGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGA
38293269 AACTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCT
324 AACTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCT
38293334 AGTTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGG
389 AGTTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGG
38293399 CATCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGA
454 CATCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGA
*
38293464 TTGGAATTGTAAAACTGTCGGGATCTTTCATCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTA
519 TTGGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTA
38293529 CATGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTT
584 CATGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTT
38293594 TAAGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGG
649 TAAGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGG
38293659 ATTTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
714 ATTTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
38293705 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
*
38293770 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTTACTTTTATCAAGCAAGTGGCAGCG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
38293835 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
131 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
38293900 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
196 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
38293965 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
261 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
*
38294030 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAAATGATCGATCAGCTAG
326 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
38294095 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
391 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
*
38294160 TCAAGTTTATGCTTGCGTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
456 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
* *
38294225 GGAATTGTAAAACTATCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGTGCTACA
521 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
38294290 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
586 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
38294355 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
651 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
38294420 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
716 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
*
38294464 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTTAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
* *
38294529 ATTCATTCTTTGCTCATGAAAGGTATTTTTCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGAG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
38294594 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
131 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
38294659 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
196 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
*
38294724 AGAAAATGAGTATATCCTTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
261 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
38294789 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
326 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
38294854 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
391 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
38294919 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
456 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
*
38294984 GGAATTGTAAAACTGTCGGGATCTTTTAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
521 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
38295049 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
586 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
38295114 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
651 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
38295179 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
716 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
38295223 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
38295288 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
38295353 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
131 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
38295418 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
196 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
38295483 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
261 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
*
38295548 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAAATGATCGATCAGCTAG
326 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
38295613 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
391 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
38295678 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
456 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
38295743 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
521 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
38295808 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
586 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
38295873 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
651 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
*
38295938 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATATTGTTT
716 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
38295982 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
*
38296047 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGAG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
38296112 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
131 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
38296177 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
196 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
38296242 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
261 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
38296307 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
326 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
38296372 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
391 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
38296437 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
456 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
*
38296502 GGAATTGTAAAACTGTCGGGATCTTTTAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
521 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
*
38296567 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACACCTTAACATAATCTCTTTTA
586 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
38296632 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
651 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
38296697 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
716 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
38296741 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
38296806 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
38296871 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
131 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
38296936 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
196 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
38297001 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
261 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
*
38297066 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCCAG
326 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
38297131 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
391 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
38297196 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
456 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
38297261 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
521 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
38297326 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
586 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
38297391 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
651 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
*
38297456 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATATTGTTT
716 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
38297500 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
*
38297565 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGAG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
38297630 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
131 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
38297695 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
196 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
38297760 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
261 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
38297825 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
326 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
38297890 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
391 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
38297955 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
456 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
*
38298020 GGAATTGTAAAACTGTCGGGATCTTTTAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
521 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
*
38298085 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACACCTTAACATAATCTCTTTTA
586 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
38298150 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
651 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
38298215 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
716 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
38298259 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
38298324 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
38298389 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
131 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
38298454 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
196 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
38298519 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
261 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
*
38298584 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCCAG
326 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
38298649 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
391 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
38298714 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
456 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
38298779 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
521 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
38298844 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
586 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
38298909 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
651 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
38298974 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
716 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
38299018 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
1 CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
38299083 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
66 ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
38299148 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
131 CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
38299213 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
196 TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
38299278 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
261 AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
38299343 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
326 CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
38299408 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
391 TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
38299473 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
456 TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
38299538 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
521 GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
38299603 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
586 TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
*
38299668 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGGCATTTAAGGAT
651 AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
*
38299733 TTAAAAAGGTTTAGAAATCTTACAAAATCATCATCATCTTGTTT
716 TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
38299777 CTTT
1 CTTT
38299781 TTCTCTTCTA
Statistics
Matches: 6027, Mismatches: 49, Indels: 2
0.99 0.01 0.00
Matches are distributed among these distances:
759 5889 0.98
761 138 0.02
ACGTcount: A:0.28, C:0.21, G:0.15, T:0.36
Consensus pattern (759 bp):
CTTTACTCCATCTCTTATCAAGTTTTTCCATTATCTTCAATCAATCCATTTCTTTAAACTTATTG
ATTCATTCTTTGCTCATGAAAGGTATTTTGCTAGATCCTTCACTTTTATCAAGCAAGTGGCAGCG
CAAATTGTGCTTTTTTCCATCATTTTTATCCTCACATTTAAAAGTCTCTATGTCACCATTGATTC
TCATTGTCAGCTCATTGGTGTTTAAGTCAATGGTGGATCTAGACATGGCTAGGAACAACCTTCCT
AGAAAATGAGTATATCCCTGTCCTCTTCAAAATCTAACACCACAAAATCCGCAAGGATGATGAAA
CTTCTTACTCGGACTAGCACATCCTCTAGAATTCCCTTCGACCTTACAGATGATCGATCAGCTAG
TTGCAAAGTCACTTGGGTATTTTTCAGATCTTCGATCCCAAGTTTCTCAAACACCGATAGGGGCA
TCAAGTTTATGCTTGCTTCAAGATCACATAATGCTCTGTTGAACTGAAGGTTCTCAATTTTGATT
GGAATTGTAAAACTGTCGGGATCTTTCAGCTTTTGTGGAATTGTTTTAAAAATAATTGCGCTACA
TGACGCATTTACTTTCACTTGCTTACCTACCTTGATCTTCTTACGCCTTAACATAATCTCTTTTA
AGAACTTGGCGTACTTTGGTACCTTTTCTATAAGTTCAATCGAAGGTAAGTTGACATTTAAGGAT
TTAAAAAGGTTTAGAAAGCTTACAAAATCATCATCATCTTGTTT
Found at i:38334334 original size:17 final size:17
Alignment explanation
Indices: 38334304--38334344 Score: 50
Period size: 17 Copynumber: 2.4 Consensus size: 17
38334294 AAACTAAAAT
38334304 GAATGCAATGACAATTAA
1 GAATGCAATGACAA-TAA
38334322 -AATGCAA-GAACAATAA
1 GAATGCAATG-ACAATAA
38334338 GAATGCA
1 GAATGCA
38334345 TGAAAACTGA
Statistics
Matches: 21, Mismatches: 0, Indels: 5
0.81 0.00 0.19
Matches are distributed among these distances:
16 4 0.19
17 17 0.81
ACGTcount: A:0.54, C:0.12, G:0.17, T:0.17
Consensus pattern (17 bp):
GAATGCAATGACAATAA
Found at i:38345957 original size:30 final size:30
Alignment explanation
Indices: 38345923--38345984 Score: 115
Period size: 30 Copynumber: 2.1 Consensus size: 30
38345913 TTTTTTTAAG
*
38345923 TATGTTTCAATCTTTTTCATAAGTATTCTT
1 TATGTTTCAATCTTTTTCATAAATATTCTT
38345953 TATGTTTCAATCTTTTTCATAAATATTCTT
1 TATGTTTCAATCTTTTTCATAAATATTCTT
38345983 TA
1 TA
38345985 ATAAATGAAT
Statistics
Matches: 31, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
30 31 1.00
ACGTcount: A:0.26, C:0.13, G:0.05, T:0.56
Consensus pattern (30 bp):
TATGTTTCAATCTTTTTCATAAATATTCTT
Found at i:38347846 original size:26 final size:27
Alignment explanation
Indices: 38347806--38347856 Score: 70
Period size: 26 Copynumber: 1.9 Consensus size: 27
38347796 TCTCACTATT
38347806 TCAATTCATCCCTCA-TCCCTTCAATCA
1 TCAATTCATCCCTCATTCCC-TCAATCA
*
38347833 TCAA-TCATCTCTCATTCCCTCAAT
1 TCAATTCATCCCTCATTCCCTCAAT
38347857 TATCTCATCT
Statistics
Matches: 22, Mismatches: 1, Indels: 3
0.85 0.04 0.12
Matches are distributed among these distances:
26 14 0.64
27 8 0.36
ACGTcount: A:0.25, C:0.39, G:0.00, T:0.35
Consensus pattern (27 bp):
TCAATTCATCCCTCATTCCCTCAATCA
Found at i:38355757 original size:13 final size:14
Alignment explanation
Indices: 38355732--38355760 Score: 51
Period size: 13 Copynumber: 2.1 Consensus size: 14
38355722 GAAATTTCTT
38355732 AAGATTCTTCAATC
1 AAGATTCTTCAATC
38355746 AAGATT-TTCAATC
1 AAGATTCTTCAATC
38355759 AA
1 AA
38355761 AGGATTTTGG
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
13 9 0.60
14 6 0.40
ACGTcount: A:0.41, C:0.17, G:0.07, T:0.34
Consensus pattern (14 bp):
AAGATTCTTCAATC
Found at i:38373164 original size:20 final size:20
Alignment explanation
Indices: 38373141--38373247 Score: 110
Period size: 20 Copynumber: 5.3 Consensus size: 20
38373131 TACAGTTGTA
* *
38373141 CAAACAGGGGAACCAAAGTG
1 CAAACAGGAGCACCAAAGTG
* *
38373161 CAAATAGGAGAACCAAAGTG
1 CAAACAGGAGCACCAAAGTG
*
38373181 AAAACCA-GAGCACCAAAGTG
1 CAAA-CAGGAGCACCAAAGTG
*
38373201 CAGAA-AGGGGCACCAAAGTG
1 CA-AACAGGAGCACCAAAGTG
* *
38373221 CAAAGAGGAGCACCGAAGTG
1 CAAACAGGAGCACCAAAGTG
38373241 CAAACAG
1 CAAACAG
38373248 AGGCATATCA
Statistics
Matches: 73, Mismatches: 10, Indels: 8
0.80 0.11 0.09
Matches are distributed among these distances:
19 3 0.04
20 67 0.92
21 3 0.04
ACGTcount: A:0.46, C:0.21, G:0.28, T:0.06
Consensus pattern (20 bp):
CAAACAGGAGCACCAAAGTG
Found at i:38381738 original size:16 final size:16
Alignment explanation
Indices: 38381713--38381743 Score: 53
Period size: 16 Copynumber: 1.9 Consensus size: 16
38381703 ATAATGCGAA
38381713 AATAAAAATGAAATGC
1 AATAAAAATGAAATGC
*
38381729 AATAATAATGAAATG
1 AATAAAAATGAAATG
38381744 AGGTCCCCAA
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
16 14 1.00
ACGTcount: A:0.61, C:0.03, G:0.13, T:0.23
Consensus pattern (16 bp):
AATAAAAATGAAATGC
Found at i:38391266 original size:26 final size:26
Alignment explanation
Indices: 38391201--38391278 Score: 111
Period size: 26 Copynumber: 3.0 Consensus size: 26
38391191 TTTATAATCC
* **
38391201 CAGACAGGATAATACTCTTACGAGCT
1 CAGACAGAATAACGCTCTTACGAGCT
38391227 CAGACAGAATAACGCTCTTACGAGCT
1 CAGACAGAATAACGCTCTTACGAGCT
* *
38391253 CAGACAGAATAACGTTCCTACGAGCT
1 CAGACAGAATAACGCTCTTACGAGCT
38391279 ATAATTTAGA
Statistics
Matches: 47, Mismatches: 5, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 47 1.00
ACGTcount: A:0.35, C:0.26, G:0.19, T:0.21
Consensus pattern (26 bp):
CAGACAGAATAACGCTCTTACGAGCT
Found at i:38394903 original size:20 final size:20
Alignment explanation
Indices: 38394880--38394936 Score: 78
Period size: 20 Copynumber: 2.9 Consensus size: 20
38394870 AAGGGAACCA
* *
38394880 AAGTACAAATAGGGGCACTG
1 AAGTGCAAATAGGGGCACCG
*
38394900 AAGTGTAAATAGGGGCACCG
1 AAGTGCAAATAGGGGCACCG
*
38394920 AAGTGCAAATAGCGGCA
1 AAGTGCAAATAGGGGCA
38394937 TATCATCTTT
Statistics
Matches: 32, Mismatches: 5, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
20 32 1.00
ACGTcount: A:0.39, C:0.16, G:0.32, T:0.14
Consensus pattern (20 bp):
AAGTGCAAATAGGGGCACCG
Found at i:38400391 original size:31 final size:32
Alignment explanation
Indices: 38400353--38400412 Score: 88
Period size: 31 Copynumber: 1.9 Consensus size: 32
38400343 AGTACAATGC
*
38400353 ATAAT-AAAATAAAATAAAATA-AAAACTACCA
1 ATAATAAAAAT-AAATAAAACATAAAACTACCA
38400384 ATAATAAAAATAAATAAAACATAAAACTA
1 ATAATAAAAATAAATAAAACATAAAACTA
38400413 AATGAAATCA
Statistics
Matches: 26, Mismatches: 1, Indels: 3
0.87 0.03 0.10
Matches are distributed among these distances:
31 14 0.54
32 12 0.46
ACGTcount: A:0.72, C:0.08, G:0.00, T:0.20
Consensus pattern (32 bp):
ATAATAAAAATAAATAAAACATAAAACTACCA
Found at i:38400468 original size:11 final size:11
Alignment explanation
Indices: 38400447--38400482 Score: 65
Period size: 11 Copynumber: 3.4 Consensus size: 11
38400437 GGAAGGAAAC
38400447 AAAAG-AAGAA
1 AAAAGAAAGAA
38400457 AAAAGAAAGAA
1 AAAAGAAAGAA
38400468 AAAAGAAAGAA
1 AAAAGAAAGAA
38400479 AAAA
1 AAAA
38400483 ATAAAAAAGA
Statistics
Matches: 25, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
10 5 0.20
11 20 0.80
ACGTcount: A:0.83, C:0.00, G:0.17, T:0.00
Consensus pattern (11 bp):
AAAAGAAAGAA
Found at i:38400495 original size:15 final size:14
Alignment explanation
Indices: 38400455--38400495 Score: 55
Period size: 15 Copynumber: 2.8 Consensus size: 14
38400445 ACAAAAGAAG
38400455 AAAAAAGAAAGAAAA
1 AAAAAAGAAA-AAAA
*
38400470 AAGAAAGAAAAAAA
1 AAAAAAGAAAAAAA
38400484 TAAAAAAGAAAA
1 -AAAAAAGAAAA
38400496 CTAGCTTTAA
Statistics
Matches: 23, Mismatches: 2, Indels: 2
0.85 0.07 0.07
Matches are distributed among these distances:
14 4 0.17
15 19 0.83
ACGTcount: A:0.85, C:0.00, G:0.12, T:0.02
Consensus pattern (14 bp):
AAAAAAGAAAAAAA
Found at i:38400948 original size:20 final size:20
Alignment explanation
Indices: 38400923--38400967 Score: 76
Period size: 20 Copynumber: 2.4 Consensus size: 20
38400913 TAAAAAAATC
38400923 AATTTTTTT-C-ATTTTTTA
1 AATTTTTTTCCAATTTTTTA
38400941 AATTTTTTTCCAATTTTTTA
1 AATTTTTTTCCAATTTTTTA
38400961 AATTTTT
1 AATTTTT
38400968 GTAAAAAATA
Statistics
Matches: 25, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
18 9 0.36
19 1 0.04
20 15 0.60
ACGTcount: A:0.24, C:0.07, G:0.00, T:0.69
Consensus pattern (20 bp):
AATTTTTTTCCAATTTTTTA
Found at i:38403028 original size:52 final size:52
Alignment explanation
Indices: 38402946--38403132 Score: 259
Period size: 52 Copynumber: 3.6 Consensus size: 52
38402936 GTAAATGAAA
*
38402946 AGGTCCAATGACTATGTGTCATCGTGAGTATATGAATTCTTTATGGATTATG
1 AGGTCCAATGACTATGTGTCATCGTGAGTATATGAATTCTTTACGGATTATG
* *
38402998 AGGCCCAATGACTATGTGTCATCGTGAGTATATGAATCCTTTACGGATTATG
1 AGGTCCAATGACTATGTGTCATCGTGAGTATATGAATTCTTTACGGATTATG
* * *
38403050 AGGTCCGATGATTATGTGTCATCGTGAGTACATGAA-TCGTTTACGGATTATG
1 AGGTCCAATGACTATGTGTCATCGTGAGTATATGAATTC-TTTACGGATTATG
*** * *
38403102 AGGTTTGATGACTGTGTGTCATTGTGAGTAT
1 AGGTCCAATGACTATGTGTCATCGTGAGTAT
38403133 TAAATGAAAT
Statistics
Matches: 120, Mismatches: 14, Indels: 2
0.88 0.10 0.01
Matches are distributed among these distances:
51 1 0.01
52 119 0.99
ACGTcount: A:0.25, C:0.13, G:0.26, T:0.36
Consensus pattern (52 bp):
AGGTCCAATGACTATGTGTCATCGTGAGTATATGAATTCTTTACGGATTATG
Found at i:38403897 original size:21 final size:21
Alignment explanation
Indices: 38403868--38403921 Score: 74
Period size: 21 Copynumber: 2.6 Consensus size: 21
38403858 GGAGTTTTTA
38403868 GTATCGGTAGAAGCATA-ACTT
1 GTATCGGTAGAAG-ATACACTT
* *
38403889 GTATTGGTAGAAGTTACACTT
1 GTATCGGTAGAAGATACACTT
38403910 GTATCGGTAGAA
1 GTATCGGTAGAA
38403922 CTTTCTCAAG
Statistics
Matches: 29, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
20 2 0.07
21 27 0.93
ACGTcount: A:0.31, C:0.11, G:0.26, T:0.31
Consensus pattern (21 bp):
GTATCGGTAGAAGATACACTT
Found at i:38410197 original size:52 final size:52
Alignment explanation
Indices: 38410118--38410252 Score: 225
Period size: 52 Copynumber: 2.6 Consensus size: 52
38410108 GTAAATGAAA
* * *
38410118 AGGTCTGATGATTATGTGTCATTGTGAGTATATGAATCCTTTATGGATTATG
1 AGGTCCGATGACTATGTGTCATTGTGAGTATATGAATCCTTTACGGATTATG
*
38410170 AGGTCCGATGACTATGTGTCATCGTGAGTATATGAATCCTTTACGGATTATG
1 AGGTCCGATGACTATGTGTCATTGTGAGTATATGAATCCTTTACGGATTATG
*
38410222 AGGTTCGATGACTATGTGTCATTGTGAGTAT
1 AGGTCCGATGACTATGTGTCATTGTGAGTAT
38410253 TAAATGAAAT
Statistics
Matches: 77, Mismatches: 6, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
52 77 1.00
ACGTcount: A:0.24, C:0.11, G:0.26, T:0.39
Consensus pattern (52 bp):
AGGTCCGATGACTATGTGTCATTGTGAGTATATGAATCCTTTACGGATTATG
Found at i:38413482 original size:14 final size:14
Alignment explanation
Indices: 38413463--38413491 Score: 58
Period size: 14 Copynumber: 2.1 Consensus size: 14
38413453 AGATAAATGA
38413463 ACCTAATCAAACTT
1 ACCTAATCAAACTT
38413477 ACCTAATCAAACTT
1 ACCTAATCAAACTT
38413491 A
1 A
38413492 AGCGAGCTCA
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 15 1.00
ACGTcount: A:0.45, C:0.28, G:0.00, T:0.28
Consensus pattern (14 bp):
ACCTAATCAAACTT
Found at i:38418429 original size:22 final size:21
Alignment explanation
Indices: 38418404--38418453 Score: 57
Period size: 22 Copynumber: 2.3 Consensus size: 21
38418394 ATTTGTAGGT
38418404 TTTTAGAAT-TTTTGATAAATCA
1 TTTTA-AATATTTTGAT-AATCA
*
38418426 TTTTAAATGATTTTGATAATTA
1 TTTTAAAT-ATTTTGATAATCA
38418448 TTTTAA
1 TTTTAA
38418454 CTTTTTATTT
Statistics
Matches: 25, Mismatches: 1, Indels: 4
0.83 0.03 0.13
Matches are distributed among these distances:
21 3 0.12
22 15 0.60
23 7 0.28
ACGTcount: A:0.36, C:0.02, G:0.08, T:0.54
Consensus pattern (21 bp):
TTTTAAATATTTTGATAATCA
Found at i:38418920 original size:16 final size:15
Alignment explanation
Indices: 38418878--38418915 Score: 51
Period size: 15 Copynumber: 2.6 Consensus size: 15
38418868 AATTCAGGGG
* *
38418878 TAAAATTTTAATAGT
1 TAAATTTTTAATACT
38418893 TAAATTTTTAATACT
1 TAAATTTTTAATACT
38418908 T-AATTTTT
1 TAAATTTTT
38418916 TTAATTTATC
Statistics
Matches: 21, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
14 7 0.33
15 14 0.67
ACGTcount: A:0.39, C:0.03, G:0.03, T:0.55
Consensus pattern (15 bp):
TAAATTTTTAATACT
Found at i:38440853 original size:25 final size:23
Alignment explanation
Indices: 38440825--38440870 Score: 65
Period size: 25 Copynumber: 1.9 Consensus size: 23
38440815 GTTGGATCCA
38440825 AATTAAATTCTAAAAAGATAATTAG
1 AATTAAATT-TAAAAA-ATAATTAG
*
38440850 AATTAAATTTAAACAATAATT
1 AATTAAATTTAAAAAATAATT
38440871 CCCTAATTAG
Statistics
Matches: 20, Mismatches: 1, Indels: 2
0.87 0.04 0.09
Matches are distributed among these distances:
23 6 0.30
24 5 0.25
25 9 0.45
ACGTcount: A:0.57, C:0.04, G:0.04, T:0.35
Consensus pattern (23 bp):
AATTAAATTTAAAAAATAATTAG
Found at i:38441914 original size:10 final size:10
Alignment explanation
Indices: 38441899--38441945 Score: 60
Period size: 10 Copynumber: 4.8 Consensus size: 10
38441889 TTTCTTCTTC
38441899 TTTTTTTCAA
1 TTTTTTTCAA
38441909 TTTTTTTCAA
1 TTTTTTTCAA
* *
38441919 TTTTTTTGAC
1 TTTTTTTCAA
*
38441929 TTTTTTTC-T
1 TTTTTTTCAA
38441938 TTTTTTTC
1 TTTTTTTC
38441946 TAAATAATAA
Statistics
Matches: 33, Mismatches: 4, Indels: 1
0.87 0.11 0.03
Matches are distributed among these distances:
9 8 0.24
10 25 0.76
ACGTcount: A:0.11, C:0.11, G:0.02, T:0.77
Consensus pattern (10 bp):
TTTTTTTCAA
Found at i:38442889 original size:6 final size:6
Alignment explanation
Indices: 38442852--38443014 Score: 80
Period size: 6 Copynumber: 26.0 Consensus size: 6
38442842 AAAAATAGTT
* * * *
38442852 AATAAA ACTAAA ACTAAA ACTAAA AATAAA AATAAAA AAAATAA AATAAA
1 AATAAA AATAAA AATAAA AATAAA AATAAA AAT-AAA AATA-AA AATAAA
* * * * * * *
38442902 AA-ACGAA AATGAA AATGAA AATGAA AAT-GA AATGAA AATGAA AATGAA
1 AATA--AA AATAAA AATAAA AATAAA AATAAA AATAAA AATAAA AATAAA
* *
38442950 AATGAAA AATGAAA AATGAAA AATGAAA AAGAAA AAGAAA ACGA-AAA
1 AAT-AAA AAT-AAA AAT-AAA AAT-AAA AATAAA AATAAA A--ATAAA
* *
38442997 AATGAA AATGAA AATAAA
1 AATAAA AATAAA AATAAA
38443015 TGTACTAATT
Statistics
Matches: 136, Mismatches: 11, Indels: 20
0.81 0.07 0.12
Matches are distributed among these distances:
5 6 0.04
6 86 0.63
7 43 0.32
8 1 0.01
ACGTcount: A:0.73, C:0.03, G:0.10, T:0.13
Consensus pattern (6 bp):
AATAAA
Found at i:38442897 original size:14 final size:15
Alignment explanation
Indices: 38442873--38442904 Score: 57
Period size: 14 Copynumber: 2.2 Consensus size: 15
38442863 AACTAAAACT
38442873 AAAAATAAAAATAAA
1 AAAAATAAAAATAAA
38442888 AAAAAT-AAAATAAA
1 AAAAATAAAAATAAA
38442902 AAA
1 AAA
38442905 CGAAAATGAA
Statistics
Matches: 17, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
14 11 0.65
15 6 0.35
ACGTcount: A:0.88, C:0.00, G:0.00, T:0.12
Consensus pattern (15 bp):
AAAAATAAAAATAAA
Found at i:38442916 original size:12 final size:12
Alignment explanation
Indices: 38442901--38443011 Score: 134
Period size: 12 Copynumber: 8.9 Consensus size: 12
38442891 AATAAAATAA
*
38442901 AAAACGAAAATG
1 AAAATGAAAATG
38442913 AAAATGAAAATG
1 AAAATGAAAATG
38442925 AAAATG-AAATG
1 AAAATGAAAATG
38442936 AAAATGAAAATG
1 AAAATGAAAATG
38442948 AAAATGAAAAATG
1 AAAATG-AAAATG
38442961 AAAAATGAAAAATG
1 -AAAATG-AAAATG
* *
38442975 AAAAAGAAAAAG
1 AAAATGAAAATG
*
38442987 AAAACGAAAAAATG
1 AAAATG--AAAATG
38443001 AAAATGAAAAT
1 AAAATGAAAAT
38443012 AAATGTACTA
Statistics
Matches: 88, Mismatches: 6, Indels: 10
0.85 0.06 0.10
Matches are distributed among these distances:
11 11 0.12
12 43 0.49
13 11 0.12
14 23 0.26
ACGTcount: A:0.70, C:0.02, G:0.15, T:0.13
Consensus pattern (12 bp):
AAAATGAAAATG
Found at i:38442960 original size:7 final size:7
Alignment explanation
Indices: 38442873--38443010 Score: 108
Period size: 6 Copynumber: 21.6 Consensus size: 7
38442863 AACTAAAACT
38442873 AAAAAT-
1 AAAAATG
38442879 AAAAAT-
1 AAAAATG
**
38442885 AAAAAAA
1 AAAAATG
*
38442892 ATAAAATA
1 A-AAAATG
*
38442900 AAAAACG
1 AAAAATG
38442907 -AAAATG
1 AAAAATG
38442913 -AAAATG
1 AAAAATG
38442919 -AAAATG
1 AAAAATG
38442925 -AAAATG
1 AAAAATG
38442931 --AAATG
1 AAAAATG
38442936 -AAAATG
1 AAAAATG
38442942 -AAAATG
1 AAAAATG
38442948 -AAAATG
1 AAAAATG
38442954 AAAAATG
1 AAAAATG
38442961 AAAAATG
1 AAAAATG
38442968 AAAAATG
1 AAAAATG
38442975 AAAAA-G
1 AAAAATG
38442981 AAAAA-G
1 AAAAATG
*
38442987 -AAAACG
1 AAAAATG
38442993 AAAAAATG
1 -AAAAATG
38443001 -AAAATG
1 AAAAATG
38443007 AAAA
1 AAAA
38443011 TAAATGTACT
Statistics
Matches: 118, Mismatches: 6, Indels: 15
0.85 0.04 0.11
Matches are distributed among these distances:
5 9 0.08
6 65 0.55
7 33 0.28
8 11 0.09
ACGTcount: A:0.74, C:0.01, G:0.12, T:0.12
Consensus pattern (7 bp):
AAAAATG
Found at i:38445206 original size:12 final size:13
Alignment explanation
Indices: 38445180--38445209 Score: 53
Period size: 13 Copynumber: 2.4 Consensus size: 13
38445170 TATAGAATAA
38445180 AAAAATTAAATTT
1 AAAAATTAAATTT
38445193 AAAAATTAAA-TT
1 AAAAATTAAATTT
38445205 AAAAA
1 AAAAA
38445210 CAAAAGATAT
Statistics
Matches: 17, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
12 7 0.41
13 10 0.59
ACGTcount: A:0.70, C:0.00, G:0.00, T:0.30
Consensus pattern (13 bp):
AAAAATTAAATTT
Found at i:38447638 original size:14 final size:13
Alignment explanation
Indices: 38447606--38447658 Score: 52
Period size: 14 Copynumber: 3.8 Consensus size: 13
38447596 TCATCTCATC
*
38447606 TCATTTACTGTTTA
1 TCATTTA-TTTTTA
* *
38447620 CCATTTATTTTTT
1 TCATTTATTTTTA
38447633 TGCATTTATATTTTA
1 T-CATTTAT-TTTTA
38447648 TCATTTATTTT
1 TCATTTATTTT
38447659 CTCGTACTTC
Statistics
Matches: 32, Mismatches: 5, Indels: 5
0.76 0.12 0.12
Matches are distributed among these distances:
13 7 0.22
14 20 0.62
15 5 0.16
ACGTcount: A:0.21, C:0.11, G:0.04, T:0.64
Consensus pattern (13 bp):
TCATTTATTTTTA
Found at i:38452749 original size:13 final size:13
Alignment explanation
Indices: 38452731--38452756 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
38452721 CATGATAAGG
38452731 AGTATCAAAAGTT
1 AGTATCAAAAGTT
38452744 AGTATCAAAAGTT
1 AGTATCAAAAGTT
38452757 TGTTTCTACT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.46, C:0.08, G:0.15, T:0.31
Consensus pattern (13 bp):
AGTATCAAAAGTT
Found at i:38456181 original size:21 final size:22
Alignment explanation
Indices: 38456149--38456189 Score: 75
Period size: 21 Copynumber: 1.9 Consensus size: 22
38456139 GACACCATGC
38456149 TTATGAAAATGTTGCGATATGT
1 TTATGAAAATGTTGCGATATGT
38456171 TTATG-AAATGTTGCGATAT
1 TTATGAAAATGTTGCGATAT
38456190 ACAAGGAAAA
Statistics
Matches: 19, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
21 14 0.74
22 5 0.26
ACGTcount: A:0.32, C:0.05, G:0.22, T:0.41
Consensus pattern (22 bp):
TTATGAAAATGTTGCGATATGT
Found at i:38458901 original size:18 final size:18
Alignment explanation
Indices: 38458878--38458915 Score: 67
Period size: 18 Copynumber: 2.1 Consensus size: 18
38458868 GTCACTTGAA
*
38458878 AAAAAAGAGAAGAAAAAG
1 AAAAAAGAAAAGAAAAAG
38458896 AAAAAAGAAAAGAAAAAG
1 AAAAAAGAAAAGAAAAAG
38458914 AA
1 AA
38458916 GAATAAATTG
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
18 19 1.00
ACGTcount: A:0.82, C:0.00, G:0.18, T:0.00
Consensus pattern (18 bp):
AAAAAAGAAAAGAAAAAG
Found at i:38467858 original size:19 final size:19
Alignment explanation
Indices: 38467827--38467870 Score: 54
Period size: 19 Copynumber: 2.3 Consensus size: 19
38467817 ATTATTTTTA
*
38467827 ATTTTTTTAAATATATATT
1 ATTTTTTTAAATATATAAT
*
38467846 ATTTTATTT-AATATTTAAT
1 ATTTT-TTTAAATATATAAT
38467865 ATTTTT
1 ATTTTT
38467871 ATATATTTTT
Statistics
Matches: 22, Mismatches: 2, Indels: 3
0.81 0.07 0.11
Matches are distributed among these distances:
18 1 0.05
19 18 0.82
20 3 0.14
ACGTcount: A:0.34, C:0.00, G:0.00, T:0.66
Consensus pattern (19 bp):
ATTTTTTTAAATATATAAT
Found at i:38467859 original size:17 final size:17
Alignment explanation
Indices: 38467839--38467886 Score: 50
Period size: 17 Copynumber: 3.0 Consensus size: 17
38467829 TTTTTTAAAT
38467839 ATATATTATTTTATTTA
1 ATATATTATTTTATTTA
*
38467856 ATAT-TTAATATT-TTT-
1 ATATATT-ATTTTATTTA
38467871 ATATATT-TTTTATTTA
1 ATATATTATTTTATTTA
38467887 TTAAAATTTT
Statistics
Matches: 25, Mismatches: 2, Indels: 9
0.69 0.06 0.25
Matches are distributed among these distances:
14 3 0.12
15 7 0.28
16 7 0.28
17 8 0.32
ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67
Consensus pattern (17 bp):
ATATATTATTTTATTTA
Found at i:38473202 original size:18 final size:18
Alignment explanation
Indices: 38473181--38473228 Score: 78
Period size: 18 Copynumber: 2.7 Consensus size: 18
38473171 TGCTCTTACA
38473181 AGCCAATATGCTCAAACG
1 AGCCAATATGCTCAAACG
*
38473199 AGCCAATATGCTCTAACG
1 AGCCAATATGCTCAAACG
*
38473217 AGCCAGTATGCT
1 AGCCAATATGCT
38473229 ATTTCTTTCG
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
18 28 1.00
ACGTcount: A:0.33, C:0.27, G:0.19, T:0.21
Consensus pattern (18 bp):
AGCCAATATGCTCAAACG
Found at i:38481536 original size:18 final size:18
Alignment explanation
Indices: 38481500--38481558 Score: 82
Period size: 18 Copynumber: 3.3 Consensus size: 18
38481490 GATCTTAGTA
* * *
38481500 ATGCTCTTATAAGCTAGT
1 ATGCTCTAATGAGCCAGT
*
38481518 ATGCTTTAATGAGCCAGT
1 ATGCTCTAATGAGCCAGT
38481536 ATGCTCTAATGAGCCAGT
1 ATGCTCTAATGAGCCAGT
38481554 ATGCT
1 ATGCT
38481559 ATTCCTTCCG
Statistics
Matches: 36, Mismatches: 5, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
18 36 1.00
ACGTcount: A:0.27, C:0.19, G:0.20, T:0.34
Consensus pattern (18 bp):
ATGCTCTAATGAGCCAGT
Found at i:38488018 original size:116 final size:116
Alignment explanation
Indices: 38487814--38488061 Score: 363
Period size: 116 Copynumber: 2.1 Consensus size: 116
38487804 AACCCATGCA
* * * * *
38487814 TGTATTGGTAGAAGTACAAGGCAGGAGAGAGGTTGTTCACTGACTTGGGTTGTATTGGTAGATGA
1 TGTATCGGTAGAAGTACAAGGCAGGAGAGAGGTTGTTCACTGACTTGGGTTATATCGATAGAGGA
**
38487879 ATAACAAGTATCGATAGTCATGTGTTTAAAAGTATC-GATAGTTTGCATACT
66 ATAACAAGTATCGATAGTCATGTGTTTAAAAGTATCAG-TAGTTCACATACT
* * *
38487930 TGTATCGGTAGAAGTACAGGGTAGGAGAGAGGTTGTTTACTGACTTGGGTTATATCGATAGAGGA
1 TGTATCGGTAGAAGTACAAGGCAGGAGAGAGGTTGTTCACTGACTTGGGTTATATCGATAGAGGA
* *
38487995 ATAACAAGTATCGATATTCATGTGTTTAGAAGTATCAGTAGTTCACATACT
66 ATAACAAGTATCGATAGTCATGTGTTTAAAAGTATCAGTAGTTCACATACT
*
38488046 TGTATCGATAGAAGTA
1 TGTATCGGTAGAAGTA
38488062 GCATGGTAAG
Statistics
Matches: 118, Mismatches: 13, Indels: 2
0.89 0.10 0.02
Matches are distributed among these distances:
116 117 0.99
117 1 0.01
ACGTcount: A:0.31, C:0.10, G:0.27, T:0.32
Consensus pattern (116 bp):
TGTATCGGTAGAAGTACAAGGCAGGAGAGAGGTTGTTCACTGACTTGGGTTATATCGATAGAGGA
ATAACAAGTATCGATAGTCATGTGTTTAAAAGTATCAGTAGTTCACATACT
Found at i:38488144 original size:21 final size:21
Alignment explanation
Indices: 38488120--38488167 Score: 60
Period size: 21 Copynumber: 2.3 Consensus size: 21
38488110 AAGTCTTATG
*
38488120 TCGGTAAAAGAGTCATTTGTA
1 TCGGTAAAAGAGTCACTTGTA
* **
38488141 TCGGTAGAATTGTCACTTGTA
1 TCGGTAAAAGAGTCACTTGTA
38488162 TCGGTA
1 TCGGTA
38488168 GAAATCTACA
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
21 23 1.00
ACGTcount: A:0.27, C:0.12, G:0.25, T:0.35
Consensus pattern (21 bp):
TCGGTAAAAGAGTCACTTGTA
Found at i:38488168 original size:21 final size:21
Alignment explanation
Indices: 38488131--38488170 Score: 71
Period size: 21 Copynumber: 1.9 Consensus size: 21
38488121 CGGTAAAAGA
*
38488131 GTCATTTGTATCGGTAGAATT
1 GTCACTTGTATCGGTAGAATT
38488152 GTCACTTGTATCGGTAGAA
1 GTCACTTGTATCGGTAGAA
38488171 ATCTACATTA
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
21 18 1.00
ACGTcount: A:0.25, C:0.12, G:0.25, T:0.38
Consensus pattern (21 bp):
GTCACTTGTATCGGTAGAATT
Found at i:38488960 original size:18 final size:18
Alignment explanation
Indices: 38488933--38488968 Score: 54
Period size: 18 Copynumber: 2.0 Consensus size: 18
38488923 ACCCTCTTAT
38488933 TAAACATAAAAATGAAAA
1 TAAACATAAAAATGAAAA
* *
38488951 TAAACGTAAAATTGAAAA
1 TAAACATAAAAATGAAAA
38488969 CAAAAAATTA
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 16 1.00
ACGTcount: A:0.67, C:0.06, G:0.08, T:0.19
Consensus pattern (18 bp):
TAAACATAAAAATGAAAA
Found at i:38494764 original size:23 final size:24
Alignment explanation
Indices: 38494737--38494783 Score: 78
Period size: 24 Copynumber: 2.0 Consensus size: 24
38494727 GATCCTTTCC
38494737 CTCTCACCGCC-TTATTTCTCCTT
1 CTCTCACCGCCTTTATTTCTCCTT
*
38494760 CTCTCACCTCCTTTATTTCTCCTT
1 CTCTCACCGCCTTTATTTCTCCTT
38494784 ATAGGAAATC
Statistics
Matches: 22, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
23 10 0.45
24 12 0.55
ACGTcount: A:0.09, C:0.43, G:0.02, T:0.47
Consensus pattern (24 bp):
CTCTCACCGCCTTTATTTCTCCTT
Found at i:38495309 original size:24 final size:24
Alignment explanation
Indices: 38495277--38495337 Score: 113
Period size: 24 Copynumber: 2.5 Consensus size: 24
38495267 CTTAATATCT
38495277 ACAAATTTAATCAACCAAACAAAC
1 ACAAATTTAATCAACCAAACAAAC
38495301 ACAAATTTAATCAACCAAACAAAC
1 ACAAATTTAATCAACCAAACAAAC
*
38495325 ACAAATTCAATCA
1 ACAAATTTAATCA
38495338 TCTATCATTC
Statistics
Matches: 36, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
24 36 1.00
ACGTcount: A:0.57, C:0.25, G:0.00, T:0.18
Consensus pattern (24 bp):
ACAAATTTAATCAACCAAACAAAC
Found at i:38497369 original size:636 final size:634
Alignment explanation
Indices: 38496159--38497419 Score: 2468
Period size: 636 Copynumber: 2.0 Consensus size: 634
38496149 GAAGCTGGTC
38496159 TGACTGTCACTTCTTGTTGTCATTTGTTCCAATCTTTTATCTGTTTGGCCAGTAGCTCTATGTAC
1 TGACTGTCACTTCTTGTTGTCATTTGTTCCAATCTTTTATCTGTTTGGCCAGTAGCTCTATGTAC
* *
38496224 TGTTAAAATAAAGTGTCACCGATAATACTTCGGGATGGCTTTACTGACTATTTTGTGGATGCCAT
66 TGTTAAAATAAAGTGTCACCGATAATACTTCGAGATGGCTTTACTGACTATTCTGTGGATGCCAT
38496289 TTGAACTCCTGCTCTTTTGCATAAGGCCGTCACTAAGTGAGGAAAGAAAATTCTCACTTTTTTGC
131 TTGAACTCCTGCTCTTTTGCATAAGGCCGTCACTAAGTGAGGAAAGAAAATTCTCACTTTTTTGC
38496354 CACTGATGTATCTCTTCACATTCTAATGGATCAATTTCCAATGCATACCTGCTTTTTTTTTTGCA
196 CACTGATGTATCTCTTCACATTCTAATGGATCAATTTCCAATGCATACCTGCTTTTTTTTTTGCA
38496419 AAATAACATAAAGTAACACAGCTCGAAAGGTATTAACCTTAGATACATTTAAAGTAGGGACAATT
261 AAATAACATAAAGTAACACAGCTCGAAAGGTATTAACCTTAGATACATTTAAAGTAGGGACAATT
38496484 CATGTGCACACAAATTGAATCCACATTTTAGCCTCTGGAAATATTATAGGTTGATTAAAGGAGGT
326 CATGTGCACACAAATTGAATCCACATTTTAGCCTCTGGAAATATTATAGGTTGATTAAAGGAGGT
38496549 TGGGATACTAGTACTTGGGTGATATTTCCATTCACCCCTTCCTTCTGTTAAGTAATTTATAATGT
391 TGGGATACTAGTACTTGGGTGATATTTCCATTCACCCCTTCCTTCTGTTAAGTAATTTATAATGT
38496614 TACCCATATCTATATCTCGAAAGTATTCTGAATCAGTCTCATCTATAAAACCTTGTTACTAGTAT
456 TACCCATATCTATATCTCGAAAGTATTCTGAATCAGTCTCATCTATAAAACCTTGTTACTAGTAT
38496679 GGAGCATTATAAAGTCACAAATAATTTGAGGGGTTACTTTCACTTGTATCCCCCACACAGATATA
521 GGAGCATTATAAAGTCACAAATAATTTGAGGGGTTACTTTCACTTGTATCCCCCACACAGATATA
38496744 GTATCCTGTATATGGCAAACAATATTTCTAGACTCTTGGTGTCACTTCT
586 GTATCCTGTATATGGCAAACAATATTTCTAGACTCTTGGTGTCACTTCT
38496793 TGACTGTCACTTCTTGTTGTCATTTGTTCCAATCTTTTATCTGTTTGGCCAGTAGCTCTATGTAC
1 TGACTGTCACTTCTTGTTGTCATTTGTTCCAATCTTTTATCTGTTTGGCCAGTAGCTCTATGTAC
38496858 TGTTAAAATAAAGTGTCACCGATAATACTTCGAGATGGCTTTACTGACTATTCTGTGGATGCCAT
66 TGTTAAAATAAAGTGTCACCGATAATACTTCGAGATGGCTTTACTGACTATTCTGTGGATGCCAT
38496923 TTGAACTCCTGCTCTTTTGCATAAGGCCGTCACTAAGTGAGGAAAGAAAATTCTCACTTTTTTGC
131 TTGAACTCCTGCTCTTTTGCATAAGGCCGTCACTAAGTGAGGAAAGAAAATTCTCACTTTTTTGC
38496988 CACTGATGTATCTCTTCACATTCTAATGGATCAATTTCCAATGCATACCTGCTTTTTTTTTTTTG
196 CACTGATGTATCTCTTCACATTCTAATGGATCAATTTCCAATGCATACCTGC--TTTTTTTTTTG
38497053 CAAAATAACATAAAGTAACACAGCTCGAAAGGTATTAACCTTAGATACATTTAAAGTAGGGACAA
259 CAAAATAACATAAAGTAACACAGCTCGAAAGGTATTAACCTTAGATACATTTAAAGTAGGGACAA
38497118 TTCATGTGCACACAAATTGAATCCACATTTTAGCCTCTGGAAATATTATAGGTTGATTAAAGGAG
324 TTCATGTGCACACAAATTGAATCCACATTTTAGCCTCTGGAAATATTATAGGTTGATTAAAGGAG
*
38497183 GTTGGGATACTAGTACTTGGGTGATATTTTCATTCACCCCTTCCTTCTGTTAAGTAATTTATAAT
389 GTTGGGATACTAGTACTTGGGTGATATTTCCATTCACCCCTTCCTTCTGTTAAGTAATTTATAAT
*
38497248 GTTACCCATATCTATATCTCGAAAGTATTCTGAATCAGTCTCATCTATAAAACCTTGTTACTATT
454 GTTACCCATATCTATATCTCGAAAGTATTCTGAATCAGTCTCATCTATAAAACCTTGTTACTAGT
38497313 ATGGAGCATTATAAAGTCACAAATAATTTGAGGGGTTACTTTCACTTGTATCCCCCACACAGATA
519 ATGGAGCATTATAAAGTCACAAATAATTTGAGGGGTTACTTTCACTTGTATCCCCCACACAGATA
38497378 TAGTATCCTGTATATGGCAAACAATATTTCTAGACTCTTGGT
584 TAGTATCCTGTATATGGCAAACAATATTTCTAGACTCTTGGT
38497420 CCTGTAAAGA
Statistics
Matches: 621, Mismatches: 4, Indels: 2
0.99 0.01 0.00
Matches are distributed among these distances:
634 245 0.39
636 376 0.61
ACGTcount: A:0.29, C:0.19, G:0.16, T:0.36
Consensus pattern (634 bp):
TGACTGTCACTTCTTGTTGTCATTTGTTCCAATCTTTTATCTGTTTGGCCAGTAGCTCTATGTAC
TGTTAAAATAAAGTGTCACCGATAATACTTCGAGATGGCTTTACTGACTATTCTGTGGATGCCAT
TTGAACTCCTGCTCTTTTGCATAAGGCCGTCACTAAGTGAGGAAAGAAAATTCTCACTTTTTTGC
CACTGATGTATCTCTTCACATTCTAATGGATCAATTTCCAATGCATACCTGCTTTTTTTTTTGCA
AAATAACATAAAGTAACACAGCTCGAAAGGTATTAACCTTAGATACATTTAAAGTAGGGACAATT
CATGTGCACACAAATTGAATCCACATTTTAGCCTCTGGAAATATTATAGGTTGATTAAAGGAGGT
TGGGATACTAGTACTTGGGTGATATTTCCATTCACCCCTTCCTTCTGTTAAGTAATTTATAATGT
TACCCATATCTATATCTCGAAAGTATTCTGAATCAGTCTCATCTATAAAACCTTGTTACTAGTAT
GGAGCATTATAAAGTCACAAATAATTTGAGGGGTTACTTTCACTTGTATCCCCCACACAGATATA
GTATCCTGTATATGGCAAACAATATTTCTAGACTCTTGGTGTCACTTCT
Found at i:38505344 original size:6 final size:6
Alignment explanation
Indices: 38505329--38505364 Score: 56
Period size: 6 Copynumber: 6.2 Consensus size: 6
38505319 TGGTGGTTAA
*
38505329 GTGC-G GTGCAG GTGCAG ATGCAG GTGCAG GTGCAG G
1 GTGCAG GTGCAG GTGCAG GTGCAG GTGCAG GTGCAG G
38505365 CTTAGGAGAA
Statistics
Matches: 28, Mismatches: 2, Indels: 1
0.90 0.06 0.03
Matches are distributed among these distances:
5 4 0.14
6 24 0.86
ACGTcount: A:0.17, C:0.17, G:0.50, T:0.17
Consensus pattern (6 bp):
GTGCAG
Found at i:38506024 original size:216 final size:216
Alignment explanation
Indices: 38505623--38509745 Score: 4833
Period size: 216 Copynumber: 19.3 Consensus size: 216
38505613 CGAACTATCT
* * * * ** * * * *
38505623 AGACAAAAAGTAGTTTACCAAATGACAAATTATTTAGATAAAATGATGCGATATCTCGAGTATTG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * *
38505688 AATGTTC-AGAAAATTCCTCGAAGGAATGGATTTTCATGAATACTTTAAGGAACCGAAGTTATAA
66 AATGTTCGA-AAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAA
* * *
38505752 AAGAACTCGTAAAAATTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAGTTCTCA
130 AAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCA
38505817 CGTAAATAAGTTTTTAATTCAA
195 CGTAAATAAGTTTTTAATTCAA
*
38505839 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCCCGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * * *
38505904 AATGTTCGAAAATTTGCTCAAAGGAATGGATTGTCATGAATACTTTAAGGAACCGAAGTTATAGA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* * * * * * * ** * *
38505969 AGAAATCGTAAAACTTCGTCAAGTTTGAAAATTTGTCCAAGATGCAAGGGAGAAACAATTCTCAA
131 AGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCAC
* *
38506034 GTAAATAATTTTTTAATACAA
196 GTAAATAAGTTTTTAATTCAA
* * ** *
38506055 AGTA-CAAAAGTTGTCTACCAAATGACAAACTATTTAGAAAAAACGATGCGATTTCCCGAGCATG
1 AG-ACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATG
* * * *
38506119 GAATGTTCAAAAAATTGCTCGAAGGAATGGATTGCCATGAATACTTTAAGGAATTGAAGTTATTA
65 GAATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAA
* * * *
38506184 AAGAACTCGAAAAAGTTCGTCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGCGAAACAATTCTCA
130 AAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCA
*
38506249 CGTAAATAAATTTTTAATTCAA
195 CGTAAATAAGTTTTTAATTCAA
* * * *
38506271 AGACCAAAAGTTTTTTTACAAAATGACAAACTATTTAGACCAAAGGATGTGATTTCCCAAGCATG
1 AGACCAAAAG-TTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATG
* * *
38506336 GAATGTTCAAAAAATTGCTCGAACGAATGGATCT-CCATGAATACTTTAAGGAACTGAAGTTATA
65 GAATGTTCGAAAAATTGCTCGAAGGAATGGAT-TGTCATGAATACTTTAAGGAACTGAAGTTATA
* * * * *
38506400 AAAGAACACATAAAAGTTTGCCAAGTTCGGAAGTTCATTCAAGAACCAAGAGAGAAACAATTCTC
129 AAAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
** * *
38506465 AAATAAATAAGTTTTTGATTCAT
194 ACGTAAATAAGTTTTTAATTCAA
* **
38506488 AGACCAAAAGTTGTTTACCAAATGACAAACTATTTAGACCAAATGATGTAATTTCCCGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* ** * * *
38506553 AATGTTCGAAAAATTACTCGAAGGAATGGATCATCATGAATAATTTAATGAAATGAAGTTATAAA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* *
38506618 AGAACTCGTAAAAGTTTGCCAAGTTC-AGAAGTTCATCCAAGAAGCAAGAGCA-AAACAATTCTC
131 AGAACTCGTAAAAGTTTGCCAAGTTCGA-AAGTTCGTCCAAGAACCAAGAG-AGAAACAATTCTC
38506681 ACGTAAATAAGTTTTTTAATTCAA
194 ACGTAAATAAG-TTTTTAATTCAA
* * * * **
38506705 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAAACCACATGATGCAATTTCCCGAGTACAG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * * ** * * * * *
38506770 AATGTTCGGAAAGTTACTCGAAGGAACAGATTATCATAAATAATTTAACGAACTGAAATTATAAA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* * * *
38506835 AGAACTAGTAAAAGTTTGCCAAGTTC-AGAAGTTTGTCCGAGAACCAAGAGCGAAACAATTCTCA
131 AGAACTCGTAAAAGTTTGCCAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCA
*
38506899 CGTAAATATGTTTTTAATTCAA
195 CGTAAATAAGTTTTTAATTCAA
* * * **
38506921 AGACC--AATTTTTTTTCAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCTAAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * * *
38506984 -ATAGCTCGAAAAATAT-CTCGAAGGAATGGATCT-TCTTGAATATTTTATGGAA-TCGAAGTTA
66 AAT-GTTCGAAAAAT-TGCTCGAAGGAATGGAT-TGTCATGAATACTTTAAGGAACT-GAAGTTA
* ** * * * *
38507045 TAGAAGAACTCGTAAAAGTTTTTCAAGTTCGGAAGTTCTTCCAAGATCTAAGAGAGAAACAATTC
127 TAAAAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTC
* * * *
38507110 TCACATAAATAAGATTTTCATTCAT
192 TCACGTAAATAAGTTTTTAATTCAA
* * * *
38507135 AGACCAAAAGTTGTTTACCAAATGACAAACTATTTAGACAAAATGATGTGATTTCCCAAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * * * *
38507200 AGTGTTCGAAAAATGGCTCGAAGGAATGGATCGTCATGATTACTTTAAGGAACTGAAGTTTTAAA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* * * * * *
38507265 AGAACTCATAAACA-TTCGTCAAGTTCAAAAGTTCGT-CATAGAACAAAGGGAGAAACAATTCTC
131 AGAACTCGTAAA-AGTTTGCCAAGTTCGAAAGTTCGTCCA-AGAACCAAGAGAGAAACAATTCTC
*
38507328 -CTGTAAATAAGTTTTTAATTTAA
194 AC-GTAAATAAGTTTTTAATTCAA
* ** * * *
38507351 AGACCAAAACTACTTTACCAAATGACAAACTATTTAGACCAAATGATACGATTTCTCGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * *
38507416 AATGTTCGAAAAATTACTCGAAGGAATGGATAGTTATGAATACTTTAAGGAACTGAAGTTATAAA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* * * *
38507481 AAAACTCATAAAAGTTTGCTAAGTTCGAAAGTTTGTCCAAGAACCAAGAGAGAAACAATTCTCAC
131 AGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCAC
38507546 GTAAATAAGTTTTTAATTCAA
196 GTAAATAAGTTTTTAATTCAA
* * *
38507567 AGACTAAAAGTTGTTTACAAAATGA-AGAATTATTTAGACCAAATGATGCGATTTCTCGAGCATG
1 AGACCAAAAGTTGTTTACAAAATGACA-AACTATTTAGACCAAATGATGCGATTTCCCGAGCATG
* * * *
38507631 GAATATTCGAAAAATTGCTAGAAGGAATGAATCT-TCATGAATACTTTAAGGAACTGAATTTATA
65 GAATGTTCGAAAAATTGCTCGAAGGAATGGAT-TGTCATGAATACTTTAAGGAACTGAAGTTATA
* * * * *
38507695 AAAGAACTCGTAAAAGTTTTCCAAGTTCGGAAGTTCATCCAAAAACAAAGAGAGAAACAATTCTC
129 AAAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTC
* *
38507760 ACGTAAATAAATTTTTTATTCAA
194 ACGTAAATAAGTTTTTAATTCAA
* * * *
38507783 AGACCAAGAGTTATTTACAAAATGACAAACTATTTAGA-CAAATTGATGCGATTTCTCAAGCATG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAA-TGATGCGATTTCCCGAGCATG
** * **
38507847 GAATGTTC-AGAAAATTGCTCGAAGGAATGGATCATCATGAATAATTTAATAAACTGAAGTTATA
65 GAATGTTCGA-AAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATA
* * * * *
38507911 AAAG-ACTCGTAAATGTTTGCCATGTTCGGAAGTTCATCCAAGAACCTAGAGCA-AAACAATTCT
129 AAAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAG-AGAAACAATTCT
* *
38507974 CATGTAAATAAGATTTTAATTCAA
193 CACGTAAATAAGTTTTTAATTCAA
*
38507998 AGACCAAAAGTTGTTTACAAAATGACAAAC-ATTTAGACCAAATGATGCGATTTCCAGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * * * *
38508062 AATATTTGAAAAATTGCTAGAAGGAATGGATTGTCATGAATACTTTAAGGTACTGAAGTTATGAA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* * * * * * * *
38508127 AGAA--C---AAAGTTTTCCAAGTTTGGAAGTTTGTCCAAGAACAAAGGGAGAAATAATTCTCAT
131 AGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCAC
38508187 GTAAATAAGTTTTT-ATTCAA
196 GTAAATAAGTTTTTAATTCAA
* * * * *
38508207 AGACCAAGAGTTATTTACAAAATGACAAACTATTTAGACCAATTGATGTGATTTCTCGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
*
38508272 AATGTTC-AGAAAATTGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACTGAAGTTATAA
66 AATGTTCGA-AAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAA
* * * * *
38508336 AAGAACTCGTAAAAGTTTGCCAAGCTCGGAAGTTCGTACAAGAACCAACAGAGAAACAATTCTCG
130 AAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCA
38508401 CGTAAATAAGTTTTTAATTCAA
195 CGTAAATAAGTTTTTAATTCAA
* * * * **
38508423 AGACTAAAAGTTGTTTACAAAATGAAAAACTATTTTGACCAAATGATGTGATTTCCTAAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * *
38508488 AATGTTC-AGAAAATTTCTTGGAGGAATGGATCT-TCATGAATACTTTAAGGAACTGAAGTTATT
66 AATGTTCGA-AAAATTGCTCGAAGGAATGGAT-TGTCATGAATACTTTAAGGAACTGAAGTTA-T
* * *
38508551 AAAA-AACTCGTAAAAGTTTGCCAAGTTC-AGAAGTTTGTCCAAGTACAAAGAGAGAAACAATTC
128 AAAAGAACTCGTAAAAGTTTGCCAAGTTCGA-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTC
* *
38508614 TCACGTACATAAGATTTTAATTCAA
192 TCACGTAAATAAGTTTTTAATTCAA
* * * *
38508639 AGACCAAAATTTGTTTACAAAATGATAAACTATTGAGACTAAATGATGCGATTTCCCGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* ** * * * *
38508704 ATTGTTCGGGAAGTTGGTCGAAGGAATGGA---TC--G--T-C---AACGAACTGAAGTAATAAA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* *
38508758 AGAACTCGTAAAAGTTTTCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGCA-AAACAATTCTCA
131 AGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAG-AGAAACAATTCTCA
38508822 CGTAAATAAGTTTTTAATTCAA
195 CGTAAATAAGTTTTTAATTCAA
* * *
38508844 AGACCAAAAGTTGCTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * * * * *
38508909 AATGTTCGAAAAGTTTCTCGAAGGAATGGATCGTCATGAATAATTTAACGAACTGAATTTATAAA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* *
38508974 AGAACTCGTAAAAGTTTGCCAAGTTCTG-AAGTTCGTCCAAGAACCAAAAGTGAAACAATTCTCA
131 AGAACTCGTAAAAGTTTGCCAAGTTC-GAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCA
*
38509038 CATAAATAAGTTTTTAATTCAA
195 CGTAAATAAGTTTTTAATTCAA
* * * * *
38509060 AGACCCAAATTTGTTTAGAAAATAACAAACTATTTAGACCAAATGATGCGATTTCCTGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * ** *
38509125 AATGTTCAAAAAATTGCTTGAAGGAATGGATCATCATGAAAACTTTAAGGAACTGAAGTTATAAA
66 AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
* * * * * *
38509190 AGAACTCGTAAAAGTTTGACAAATTCGGAATTTCGTCCAATAACCAAGAGACAAACAATTCTCAC
131 AGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCAC
*** *
38509255 GTAAA-AAAAATTTAATACAA
196 GTAAATAAGTTTTTAATTCAA
* * *
38509275 AGACCAAAAGTTGTTTACAAAATGATAAACTATTTAGACCAAATGATACGATTTCCTGAGCATGG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
* * * * * *
38509340 -ATAGTTCGAAAAATAT-CTCGAAGGAAGGGATCT-TCTTGAATATTTTATGGAACCGATGTTAT
66 AAT-GTTCGAAAAAT-TGCTCGAAGGAATGGAT-TGTCATGAATACTTTAAGGAACTGAAGTTAT
** * * * *
38509402 AAAAGAACTCGTAAAAGTTTGAAAAGTTTGAAAGTTTGTCCAAGATCCAAGAGAGAAACAATTAT
128 AAAAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCT
38509467 CACGTAAATAAGTTTTTAATTCACA
193 CACGTAAATAAGTTTTTAATTCA-A
* * * * *
38509492 A-ACCAAAAGTAGTTTACAAAATGACAAACTATTTAGAGCAAATGATGTGATTTCTC-ACGCCTG
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGA-GCATG
* * * *
38509555 G-ATAGTTCGAAAAATAT-CTCGAAGGAATGGATCGTCTTGAATATTTTAAGGAACCGAAGTTAT
65 GAAT-GTTCGAAAAAT-TGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTAT
* *
38509618 AGAAGAACTCGTAAAAG--T------TT-----G-TC-T--AAGATCCAAGAGAGAAACAATTCT
128 AAAAGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCT
38509666 CACGTAAATAAGTTTTTAATTCAA
193 CACGTAAATAAGTTTTTAATTCAA
* * * * *
38509690 AGACAAAAAGTTGTTTACCAAATGACATACTATTGAAACCAAATGATGCGATTTCC
1 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCC
38509746 TGAGACGAAC
Statistics
Matches: 3363, Mismatches: 469, Indels: 167
0.84 0.12 0.04
Matches are distributed among these distances:
198 2 0.00
199 91 0.03
201 1 0.00
202 1 0.00
203 1 0.00
204 5 0.00
205 170 0.05
206 1 0.00
208 5 0.00
209 37 0.01
210 148 0.04
211 1 0.00
212 2 0.00
213 6 0.00
214 250 0.07
215 357 0.11
216 1887 0.56
217 397 0.12
218 1 0.00
ACGTcount: A:0.40, C:0.14, G:0.17, T:0.28
Consensus pattern (216 bp):
AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGG
AATGTTCGAAAAATTGCTCGAAGGAATGGATTGTCATGAATACTTTAAGGAACTGAAGTTATAAA
AGAACTCGTAAAAGTTTGCCAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCAC
GTAAATAAGTTTTTAATTCAA
Found at i:38507147 original size:647 final size:646
Alignment explanation
Indices: 38505629--38509745 Score: 4955
Period size: 647 Copynumber: 6.4 Consensus size: 646
38505619 ATCTAGACAA
* * * ** * * * * *
38505629 AAAGTAGTTTACCAAATGACAAATTATTTAGATAAAATGATGCGATATCTCGAGTATTGAATGTT
1 AAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCAAGCATGGAATGTT
* * *
38505694 C-AGAAAATTCCTCGAAGGAATGGATTTTCATGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
66 CGA-AAAATTGCTCGAAGGAATGGATCTTCATGAATACTTTAAGGAACTGAAGTTATAAAAGAAC
* *
38505758 TCGTAAAAATTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAGTTCTCACGTAAA
130 TCGTAAAAGTTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAA
38505823 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGT
195 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGT
* * * ** *
38505888 GATTTCCCGAGCATGGAATGTTCGAAAATTTGCTCAAAGGAATGGATTGTCATGAATACTTTAAG
260 GATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCATCATGAATAATTTAAG
* * * * * * * * * *
38505953 GAACCGAAGTTATAGAAGAAATCGTAAAACTTCGTCAAGTT-TGAAAATTTGTCCAAGATGCAAG
325 GAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTTCAG-AAGTTCGTCCAAGA-ACAAG
* * ** * * *
38506017 GGAGAAACAATTCTCAAGTAAATAATTTTTTAATACAAAGTA-CAAAAGTTGTCTACCAAATGAC
388 AGAGAAACAATTCTCACGTAAATAAGATTTTAATTCAAAG-ACCAAAAGTTGTTTACAAAATGAC
** * * *
38506081 AAACTATTTAGAAAAAACGATGCGATTTCCCGAGCATGGAATGTTCAAAAAATTGCTCGAAGGAA
452 AAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTACTCGAAGGAA
** * * * * *
38506146 TGGATTGCCATGAATACTTTAAGGAATTGAAGTTATTAAAGAACTCGAAAAAGTTCGTCAAGTTC
517 TGGATTATCATGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTTC
* * *
38506211 GAAAGTTCGTCCAAGAACCAAGAGCGAAACAATTCTCACGTAAATAAATTTTTAATTCAAAGACC
582 GAAAGTTTGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * *
38506276 AAAAGTTTTTTTACAAAATGACAAACTATTTAGACCAAAGGATGTGATTTCCCAAGCATGGAATG
1 -AAAG-TTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCAAGCATGGAATG
* * *
38506341 TTCAAAAAATTGCTCGAACGAATGGATCTCCATGAATACTTTAAGGAACTGAAGTTATAAAAGAA
64 TTCGAAAAATTGCTCGAAGGAATGGATCTTCATGAATACTTTAAGGAACTGAAGTTATAAAAGAA
* * * * **
38506406 CACATAAAAGTTTGCCAAGTTCGGAAGTTCATTCAAGAACCAAGAGAGAAACAATTCTCAAATAA
129 CTCGTAAAAGTTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAA
* * *
38506471 ATAAGTTTTTGATTCATAGACCAAAAGTTGTTTACCAAATGACAAACTATTTAGACCAAATGATG
194 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATG
* * *
38506536 TAATTTCCCGAGCATGGAATGTTCGAAAAATTACTCGAAGGAATGGATCATCATGAATAATTTAA
259 TGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCATCATGAATAATTTAA
* * *
38506601 TGAAATGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTTCAGAAGTTCATCCAAGAAGCAAG
324 GGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTTCAGAAGTTCGTCCAAGAA-CAAG
*
38506666 AGCA-AAACAATTCTCACGTAAATAAGTTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGA
388 AG-AGAAACAATTCTCACGTAAATAAG-ATTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGA
* * * * ** * *
38506730 CAAACTATTTAAACCACATGATGCAATTTCCCGAGTACAGAATGTTCGGAAAGTTACTCGAAGGA
451 CAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTACTCGAAGGA
** * * * * *
38506795 ACAGATTATCATAAATAATTTAACGAACTGAAATTATAAAAGAACTAGTAAAAGTTTGCCAAGTT
516 ATGGATTATCATGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTT
* * *
38506860 C-AGAAGTTTGTCCGAGAACCAAGAGCGAAACAATTCTCACGTAAATATGTTTTTAATTCAAAGA
581 CGA-AAGTTTGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA
38506924 CC
645 CC
* * * *
38506926 -AATTTTTTTTCAAAATGACAAACTATTTAGACCAAATGATGCGATTTC-CTAAGCATGG-ATAG
1 AAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTC-AAGCATGGAAT-G
* * * * *
38506988 CTCGAAAAATAT-CTCGAAGGAATGGATCTTCTTGAATATTTTATGGAA-TCGAAGTTATAGAAG
64 TTCGAAAAAT-TGCTCGAAGGAATGGATCTTCATGAATACTTTAAGGAACT-GAAGTTATAAAAG
** * * * *
38507051 AACTCGTAAAAGTTTTTCAAGTTCGGAAGTTCTTCCAAGATCTAAGAGAGAAACAATTCTCACAT
127 AACTCGTAAAAGTTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGT
* * * * *
38507116 AAATAAGATTTTCATTCATAGACCAAAAGTTGTTTACCAAATGACAAACTATTTAGACAAAATGA
192 AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGA
* * * * *
38507181 TGTGATTTCCCAAGCATGGAGTGTTCGAAAAATGGCTCGAAGGAATGGATCGTCATGATTACTTT
257 TGTGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCATCATGAATAATTT
* * * * *
38507246 AAGGAACTGAAGTTTTAAAAGAACTCATAAACA-TTCGTCAAGTTCAAAAGTTCGT-CATAGAAC
322 AAGGAACTGAAGTTATAAAAGAACTCGTAAA-AGTTTGCCAAGTTCAGAAGTTCGTCCA-AGAAC
* * * * ** *
38507309 AAAGGGAGAAACAATTCTC-CTGTAAATAAGTTTTTAATTTAAAGACCAAAACTACTTTACCAAA
385 -AAGAGAGAAACAATTCTCAC-GTAAATAAGATTTTAATTCAAAGACCAAAAGTTGTTTACAAAA
* *
38507373 TGACAAACTATTTAGACCAAATGATACGATTTCTCGAGCATGGAATGTTCGAAAAATTACTCGAA
448 TGACAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTACTCGAA
* * * *
38507438 GGAATGGA-TAGTTATGAATACTTTAAGGAACTGAAGTTATAAAAAAACTCATAAAAGTTTGCTA
513 GGAATGGATTA-TCATGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCA
38507502 AGTTCGAAAGTTTGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAA
577 AGTTCGAAAGTTTGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAA
*
38507567 AGACTA
642 AGAC-C
* * * *
38507573 AAAGTTGTTTACAAAATGA-AGAATTATTTAGACCAAATGATGCGATTTCTCGAGCATGGAATAT
1 AAAGTTGTTTACAAAATGACA-AACTATTTAGACCAAATGATGTGATTTCTCAAGCATGGAATGT
* * *
38507637 TCGAAAAATTGCTAGAAGGAATGAATCTTCATGAATACTTTAAGGAACTGAATTTATAAAAGAAC
65 TCGAAAAATTGCTCGAAGGAATGGATCTTCATGAATACTTTAAGGAACTGAAGTTATAAAAGAAC
* * * *
38507702 TCGTAAAAGTTTTCCAAGTTCGGAAGTTCATCCAAAAACAAAGAGAGAAACAATTCTCACGTAAA
130 TCGTAAAAGTTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAA
* * * *
38507767 TAAATTTTTTATTCAAAGACCAAGAGTTATTTACAAAATGACAAACTATTTAGA-CAAATTGATG
195 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAA-TGATG
* *
38507831 CGATTTCTCAAGCATGGAATGTTC-AGAAAATTGCTCGAAGGAATGGATCATCATGAATAATTTA
259 TGATTTCCCAAGCATGGAATGTTCGA-AAAATTGCTCGAAGGAATGGATCATCATGAATAATTTA
** * * * * *
38507895 ATAAACTGAAGTTATAAAAG-ACTCGTAAATGTTTGCCATGTTCGGAAGTTCATCCAAGAACCTA
323 AGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTTCAGAAGTTCGTCCAAGAA-CAA
*
38507959 GAGCA-AAACAATTCTCATGTAAATAAGATTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGA
387 GAG-AGAAACAATTCTCACGTAAATAAGATTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGA
* * * * *
38508023 CAAAC-ATTTAGACCAAATGATGCGATTTCCAGAGCATGGAATATTTGAAAAATTGCTAGAAGGA
451 CAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTACTCGAAGGA
* * * *
38508087 ATGGATTGTCATGAATACTTTAAGGTACTGAAGTTATGAAAGAA--C---AAAGTTTTCCAAGTT
516 ATGGATTATCATGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTT
* * * * * *
38508147 TGGAAGTTTGTCCAAGAACAAAGGGAGAAATAATTCTCATGTAAATAAGTTTTT-ATTCAAAGAC
581 CGAAAGTTTGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGAC
38508211 C
646 C
* * *
38508212 AAGAGTTATTTACAAAATGACAAACTATTTAGACCAATTGATGTGATTTCTCGAGCATGGAATGT
1 AA-AGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCAAGCATGGAATGT
*
38508277 TC-AGAAAATTGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACTGAAGTTATAAAAGAA
65 TCGA-AAAATTGCTCGAAGGAATGGATCTTCATGAATACTTTAAGGAACTGAAGTTATAAAAGAA
* * * *
38508341 CTCGTAAAAGTTTGCCAAGCTCGGAAGTTCGTACAAGAACCAACAGAGAAACAATTCTCGCGTAA
129 CTCGTAAAAGTTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAA
* * *
38508406 ATAAGTTTTTAATTCAAAGACTAAAAGTTGTTTACAAAATGAAAAACTATTTTGACCAAATGATG
194 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATG
* * * * * *
38508471 TGATTTCCTAAGCATGGAATGTTC-AGAAAATTTCTTGGAGGAATGGATCTTCATGAATACTTTA
259 TGATTTCCCAAGCATGGAATGTTCGA-AAAATTGCTCGAAGGAATGGATCATCATGAATAATTTA
* *
38508535 AGGAACTGAAGTTATTAAAA-AACTCGTAAAAGTTTGCCAAGTTCAGAAGTTTGTCCAAGTACAA
323 AGGAACTGAAGTTA-TAAAAGAACTCGTAAAAGTTTGCCAAGTTCAGAAGTTCGTCCAAGAAC-A
* *
38508599 AGAGAGAAACAATTCTCACGTACATAAGATTTTAATTCAAAGACCAAAATTTGTTTACAAAATGA
386 AGAGAGAAACAATTCTCACGTAAATAAGATTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGA
* * * * ** * **
38508664 TAAACTATTGAGACTAAATGATGCGATTTCCCGAGCATGGATTGTTCGGGAAGTTGGTCGAAGGA
451 CAAACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTACTCGAAGGA
* * *
38508729 ATGG---ATC--G--T-C---AACGAACTGAAGTAATAAAAGAACTCGTAAAAGTTTTCCAAGTT
516 ATGGATTATCATGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTT
* *
38508783 CGGAAGTTCGTCCAAGAACCAAGAGCA-AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA
581 CGAAAGTTTGTCCAAGAACCAAGAG-AGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA
38508847 CC
645 CC
* *
38508849 AAAAGTTGCTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCGAGCATGGAATGT
1 -AAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCAAGCATGGAATGT
* * * * * *
38508914 TCGAAAAGTTTCTCGAAGGAATGGATCGTCATGAATAATTTAACGAACTGAATTTATAAAAGAAC
65 TCGAAAAATTGCTCGAAGGAATGGATCTTCATGAATACTTTAAGGAACTGAAGTTATAAAAGAAC
* * * *
38508979 TCGTAAAAGTTTGCCAAGTTCTGAAGTTCGTCCAAGAACCAAAAGTGAAACAATTCTCACATAAA
130 TCGTAAAAGTTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAA
* * * * *
38509044 TAAGTTTTTAATTCAAAGACCCAAATTTGTTTAGAAAATAACAAACTATTTAGACCAAATGATGC
195 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGT
** * *
38509109 GATTTCCTGAGCATGGAATGTTCAAAAAATTGCTTGAAGGAATGGATCATCATGAA-AACTTTAA
260 GATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCATCATGAATAA-TTTAA
* * * * *
38509173 GGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAATTCGGAATTTCGTCCAATAACCAAG
324 GGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTTCAGAAGTTCGTCCAAGAA-CAAG
* * * * *
38509238 AGACAAACAATTCTCACGTAAA-AAAAATTTAATACAAAGACCAAAAGTTGTTTACAAAATGATA
388 AGAGAAACAATTCTCACGTAAATAAGATTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* *
38509302 AACTATTTAGACCAAATGATACGATTTCCTGAGCATGG-ATAGTTCGAAAAA-TATCTCGAAGGA
453 AACTATTTAGACCAAATGATGCGATTTCCCGAGCATGGAAT-GTTCGAAAAATTA-CTCGAAGGA
* * * * * * **
38509365 AGGGATCT-TCTTGAATATTTTATGGAACCGATGTTATAAAAGAACTCGTAAAAGTTTGAAAAGT
516 ATGGAT-TATCATGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGT
* * *
38509429 TTGAAAGTTTGTCCAAGATCCAAGAGAGAAACAATTATCACGTAAATAAGTTTTTAATTCACAA-
580 TCGAAAGTTTGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCA-AAG
38509493 ACC
644 ACC
* * * *
38509496 AAAAGTAGTTTACAAAATGACAAACTATTTAGAGCAAATGATGTGATTTCTCACGCCTGG-ATAG
1 -AAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCAAGCATGGAAT-G
* * * * *
38509560 TTCGAAAAATAT-CTCGAAGGAATGGATCGTCTTGAATATTTTAAGGAACCGAAGTTATAGAAGA
64 TTCGAAAAAT-TGCTCGAAGGAATGGATCTTCATGAATACTTTAAGGAACTGAAGTTATAAAAGA
*
38509624 ACTCGTAAAAG--T------TT-----G-TC-T--AAGATCCAAGAGAGAAACAATTCTCACGTA
128 ACTCGTAAAAGTTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTA
* * * * *
38509672 AATAAGTTTTTAATTCAAAGACAAAAAGTTGTTTACCAAATGACATACTATTGAAACCAAATGAT
193 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGAT
*
38509737 GCGATTTCC
258 GTGATTTCC
38509746 TGAGACGAAC
Statistics
Matches: 3003, Mismatches: 392, Indels: 166
0.84 0.11 0.05
Matches are distributed among these distances:
630 91 0.03
631 19 0.01
632 1 0.00
633 3 0.00
634 2 0.00
635 3 0.00
636 157 0.05
637 370 0.12
638 5 0.00
639 9 0.00
640 303 0.10
641 170 0.06
642 52 0.02
643 1 0.00
644 1 0.00
645 3 0.00
646 299 0.10
647 658 0.22
648 301 0.10
649 357 0.12
650 198 0.07
ACGTcount: A:0.40, C:0.14, G:0.17, T:0.28
Consensus pattern (646 bp):
AAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCAAGCATGGAATGTT
CGAAAAATTGCTCGAAGGAATGGATCTTCATGAATACTTTAAGGAACTGAAGTTATAAAAGAACT
CGTAAAAGTTTGCCAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAAT
AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGTG
ATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCATCATGAATAATTTAAGG
AACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTTCAGAAGTTCGTCCAAGAACAAGAGA
GAAACAATTCTCACGTAAATAAGATTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAAC
TATTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTACTCGAAGGAATGGA
TTATCATGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGCCAAGTTCGAAA
GTTTGTCCAAGAACCAAGAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
Found at i:38507382 original size:20 final size:20
Alignment explanation
Indices: 38507357--38507396 Score: 55
Period size: 21 Copynumber: 1.9 Consensus size: 20
38507347 TTAAAGACCA
38507357 AAACTACTTT-ACCAAATGAC
1 AAACTA-TTTAACCAAATGAC
38507377 AAACTATTTAGACCAAATGA
1 AAACTATTTA-ACCAAATGA
38507397 TACGATTTCT
Statistics
Matches: 18, Mismatches: 0, Indels: 3
0.86 0.00 0.14
Matches are distributed among these distances:
19 3 0.17
20 6 0.33
21 9 0.50
ACGTcount: A:0.47, C:0.20, G:0.07, T:0.25
Consensus pattern (20 bp):
AAACTATTTAACCAAATGAC
Found at i:38511589 original size:22 final size:22
Alignment explanation
Indices: 38511548--38511589 Score: 66
Period size: 22 Copynumber: 1.9 Consensus size: 22
38511538 ATATAAATAT
*
38511548 TCAATTATATTGGCACAATAAA
1 TCAATTATATTGACACAATAAA
*
38511570 TCAATTATATTGACATAATA
1 TCAATTATATTGACACAATA
38511590 CATCCATGGC
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
22 18 1.00
ACGTcount: A:0.45, C:0.12, G:0.07, T:0.36
Consensus pattern (22 bp):
TCAATTATATTGACACAATAAA
Found at i:38517811 original size:18 final size:18
Alignment explanation
Indices: 38517787--38517838 Score: 70
Period size: 18 Copynumber: 2.9 Consensus size: 18
38517777 GAAACTCTAT
38517787 ATCCTTCATGGATTTTAA
1 ATCCTTCATGGATTTTAA
*
38517805 TTCCTTC-TAGGATTTTAA
1 ATCCTTCAT-GGATTTTAA
*
38517823 ATCCTTCAGGGATTTT
1 ATCCTTCATGGATTTT
38517839 CATATAAATT
Statistics
Matches: 29, Mismatches: 3, Indels: 4
0.81 0.08 0.11
Matches are distributed among these distances:
17 1 0.03
18 28 0.97
ACGTcount: A:0.23, C:0.17, G:0.13, T:0.46
Consensus pattern (18 bp):
ATCCTTCATGGATTTTAA
Found at i:38520455 original size:10 final size:9
Alignment explanation
Indices: 38520440--38520465 Score: 52
Period size: 9 Copynumber: 2.9 Consensus size: 9
38520430 CAATTTATTA
38520440 TTTTTTTCT
1 TTTTTTTCT
38520449 TTTTTTTCT
1 TTTTTTTCT
38520458 TTTTTTTC
1 TTTTTTTC
38520466 AAGTGACTGA
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 17 1.00
ACGTcount: A:0.00, C:0.12, G:0.00, T:0.88
Consensus pattern (9 bp):
TTTTTTTCT
Found at i:38521490 original size:3 final size:3
Alignment explanation
Indices: 38521468--38521523 Score: 62
Period size: 3 Copynumber: 18.7 Consensus size: 3
38521458 CCTCTGTAGG
* *
38521468 TTC TTT TTC TTC TT- TCTC TTC TTCC TT- TCC TTC TTC TTC TTC TTC
1 TTC TTC TTC TTC TTC T-TC TTC TT-C TTC TTC TTC TTC TTC TTC TTC
38521513 TTC TTC TTC TT
1 TTC TTC TTC TT
38521524 GATCCTTCTC
Statistics
Matches: 45, Mismatches: 4, Indels: 8
0.79 0.07 0.14
Matches are distributed among these distances:
2 2 0.04
3 39 0.87
4 4 0.09
ACGTcount: A:0.00, C:0.32, G:0.00, T:0.68
Consensus pattern (3 bp):
TTC
Found at i:38531779 original size:11 final size:11
Alignment explanation
Indices: 38531749--38531773 Score: 50
Period size: 11 Copynumber: 2.3 Consensus size: 11
38531739 TATTTTATCA
38531749 TATATTCACTT
1 TATATTCACTT
38531760 TATATTCACTT
1 TATATTCACTT
38531771 TAT
1 TAT
38531774 TATCACAATA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 14 1.00
ACGTcount: A:0.28, C:0.16, G:0.00, T:0.56
Consensus pattern (11 bp):
TATATTCACTT
Found at i:38533920 original size:59 final size:61
Alignment explanation
Indices: 38533819--38533936 Score: 150
Period size: 59 Copynumber: 2.0 Consensus size: 61
38533809 TCGCGAGTAT
* * * *
38533819 ATGAATTCCTATACGGAATAAGAGGTCCGATGACTATATGTCATCGTGAGTATTAAATGAA
1 ATGAATTCCAATACGGAACAAGAGGTCCGATGACTATATGTCATCGTGAGAAATAAATGAA
* * * *
38533880 ATGAATTCCAATGC-GAACAAG-GGTCTGATGACTTTGTGTCATCGTGAGAAATAAATG
1 ATGAATTCCAATACGGAACAAGAGGTCCGATGACTATATGTCATCGTGAGAAATAAATG
38533937 CGAGTGAAAC
Statistics
Matches: 49, Mismatches: 8, Indels: 2
0.83 0.14 0.03
Matches are distributed among these distances:
59 31 0.63
60 6 0.12
61 12 0.24
ACGTcount: A:0.35, C:0.14, G:0.23, T:0.29
Consensus pattern (61 bp):
ATGAATTCCAATACGGAACAAGAGGTCCGATGACTATATGTCATCGTGAGAAATAAATGAA
Found at i:38543078 original size:7 final size:7
Alignment explanation
Indices: 38543015--38543080 Score: 60
Period size: 7 Copynumber: 9.4 Consensus size: 7
38543005 CTCGAAAAAA
38543015 GTCAACG
1 GTCAACG
* *
38543022 ATCAACA
1 GTCAACG
*
38543029 GTCAACT
1 GTCAACG
* *
38543036 ATCAAAG
1 GTCAACG
*
38543043 GTCAACT
1 GTCAACG
*
38543050 ATCAACG
1 GTCAACG
*
38543057 GTCAATG
1 GTCAACG
38543064 GTCAACG
1 GTCAACG
38543071 GTCAACG
1 GTCAACG
38543078 GTC
1 GTC
38543081 TGGGTCGGGT
Statistics
Matches: 44, Mismatches: 15, Indels: 0
0.75 0.25 0.00
Matches are distributed among these distances:
7 44 1.00
ACGTcount: A:0.35, C:0.26, G:0.20, T:0.20
Consensus pattern (7 bp):
GTCAACG
Found at i:38543080 original size:14 final size:14
Alignment explanation
Indices: 38543015--38543077 Score: 72
Period size: 14 Copynumber: 4.5 Consensus size: 14
38543005 CTCGAAAAAA
*
38543015 GTCAACGATCAACA
1 GTCAACGATCAACG
* *
38543029 GTCAACTATCAAAG
1 GTCAACGATCAACG
*
38543043 GTCAACTATCAACG
1 GTCAACGATCAACG
* *
38543057 GTCAATGGTCAACG
1 GTCAACGATCAACG
38543071 GTCAACG
1 GTCAACG
38543078 GTCTGGGTCG
Statistics
Matches: 41, Mismatches: 8, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
14 41 1.00
ACGTcount: A:0.37, C:0.25, G:0.19, T:0.19
Consensus pattern (14 bp):
GTCAACGATCAACG
Found at i:38543172 original size:27 final size:27
Alignment explanation
Indices: 38543134--38543193 Score: 93
Period size: 27 Copynumber: 2.2 Consensus size: 27
38543124 TGGTTCACTT
*
38543134 GGTTTGGGTTTGGTTCAAAAGGGTTTG
1 GGTTTGGGTTTGGGTCAAAAGGGTTTG
* *
38543161 GGTTTGGTTTTGGGTCTAAAGGGTTTG
1 GGTTTGGGTTTGGGTCAAAAGGGTTTG
38543188 GGTTTG
1 GGTTTG
38543194 TTGTTGATTA
Statistics
Matches: 30, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
27 30 1.00
ACGTcount: A:0.12, C:0.03, G:0.42, T:0.43
Consensus pattern (27 bp):
GGTTTGGGTTTGGGTCAAAAGGGTTTG
Done.