Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: CP032249.1 Gossypioides kirkii chromosome KI_07
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 37252039
ACGTcount: A:0.33, C:0.16, G:0.17, T:0.34
Warning! 2100 characters in sequence are not A, C, G, or T
File 43 of 120
Found at i:11839894 original size:11 final size:11
Alignment explanation
Indices: 11839875--11839921 Score: 62
Period size: 11 Copynumber: 4.3 Consensus size: 11
11839865 AATATATTTC
11839875 TTTTCTTT-TT
1 TTTTCTTTCTT
11839885 TTTCTCTTT-TCT
1 TTT-TCTTTCT-T
11839897 TTTTCTTTCTT
1 TTTTCTTTCTT
11839908 TTTTCTTTCTT
1 TTTTCTTTCTT
11839919 TTT
1 TTT
11839922 GTGAATTTTT
Statistics
Matches: 34, Mismatches: 0, Indels: 5
0.87 0.00 0.13
Matches are distributed among these distances:
10 3 0.09
11 26 0.76
12 5 0.15
ACGTcount: A:0.00, C:0.17, G:0.00, T:0.83
Consensus pattern (11 bp):
TTTTCTTTCTT
Found at i:11839921 original size:21 final size:22
Alignment explanation
Indices: 11839871--11839921 Score: 72
Period size: 21 Copynumber: 2.4 Consensus size: 22
11839861 TGGCAATATA
11839871 TTTC-TTTTCTTTTTTTTCTCT
1 TTTCTTTTTCTTTTTTTTCTCT
11839892 TTTCTTTTTCTTTCTTTTT-TC-
1 TTTCTTTTTCTTT-TTTTTCTCT
11839913 TTTCTTTTT
1 TTTCTTTTT
11839922 GTGAATTTTT
Statistics
Matches: 28, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
21 13 0.46
22 10 0.36
23 5 0.18
ACGTcount: A:0.00, C:0.18, G:0.00, T:0.82
Consensus pattern (22 bp):
TTTCTTTTTCTTTTTTTTCTCT
Found at i:11846411 original size:15 final size:15
Alignment explanation
Indices: 11846391--11846421 Score: 62
Period size: 15 Copynumber: 2.1 Consensus size: 15
11846381 TCAACTTGCC
11846391 TTTGCAACTCCTTTG
1 TTTGCAACTCCTTTG
11846406 TTTGCAACTCCTTTG
1 TTTGCAACTCCTTTG
11846421 T
1 T
11846422 CTCCTCGGGA
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 16 1.00
ACGTcount: A:0.13, C:0.26, G:0.13, T:0.48
Consensus pattern (15 bp):
TTTGCAACTCCTTTG
Found at i:11858822 original size:216 final size:216
Alignment explanation
Indices: 11858438--11859832 Score: 1566
Period size: 216 Copynumber: 6.5 Consensus size: 216
11858428 ACTTTGTCTT
* * ** * *
11858438 TTTGTAATTTTGTAAAGAACTTTTGGTCTTTGAAGAAAAAAACTTATTTATGTGAGAATTATTTC
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAA-TTAAAAACTTATTTACGTGAGAATTGTTTC
* * * *
11858503 TCTCTTGGCTCTTGGGT-GAACTTTTGAACTTTTCAAACTTGTACAAGTTCTTTTATAACTTCGA
65 TCTCTTGGATCTT-GGTCGAACTTTCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGG
* * * *
11858567 TTCCTTAAAGTATTCAAGACAATCCATTCCTTTGAGCAATTTTCCAAACATTCCATTCTCGAGAA
129 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTCGAGAA
*
11858632 ATTGCATCATTTGGTCTAAATAG
194 ATCGCATCATTTGGTCTAAATAG
* *
11858655 TTTATCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTTTTTCT
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT
* * * ** ** **
11858720 CTCTTCGTTCTTGGTCGAACTTTTGAACTTTTCAAACTTTTATGAGTTCGATTATAACTTTAGTT
66 CTCTTGGATCTTGGTCGAACTTTCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGGTT
** * * * * *
11858785 CCTTAAAGTATTCAAGATTATCCGTTCCTTCGAGCAATTTTTCGAACCTTCAATGCTCGAGATAT
131 CCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTCGAGAAAT
* * *
11858850 CGCATCATTTGTTCTGAACAG
196 CGCATCATTTGGTCTAAATAG
* * *
11858871 TTTGTCATTTTATAAACAACTTTTGGTCTTTGAA-TAAAAAGCTTATTTACTTGAGAATTATTTC
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTACGTGAGAATTGTTTC
* * * *
11858935 TCTCTTGAATCTTGG-CTGAACATTCAAACTTTTCAAAGTTTTACAAGTTCTTTTATAACTTCGG
65 TCTCTTGGATCTTGGTC-GAACTTTCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGG
* * **
11858999 TTCCTTAAAGTATTCAAGACGATTCACTCCTTCGAGCAATTTTTTGAACATTCCATGCTCGAGAA
129 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTCGAGAA
* *
11859064 ATTGCATCATTTGGTCTAAACAG
194 ATCGCATCATTTGGTCTAAATAG
* * *
11859087 TTTGTCATTTTGTAAAGAACTTTTGG-CGTTTGAATT---AA---GTTT-CGTGAGAATTGTTTG
1 TTTGTCATTTTGTAAACAACTTTTGGTC-TTTGAATTAAAAACTTATTTACGTGAGAATTGTTTC
* * * * * *
11859144 TCTCTTGGATCTTTGACAAACTTTTGAACTTCTCAAACTCTTACAAGTTCTTTTATAACTTCGGT
65 TCTCTTGGATCTTGGTCGAACTTTCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* * * * * * *
11859209 TCCTTAAAGTATTCAAGAAGATCCATTTCTTCTAGCAATTTTCAGAACATTCAATGCTCAAGATA
130 TCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTCGAGAAA
*
11859274 TCACATCATTTGGTCTAAATAG
195 TCGCATCATTTGGTCTAAATAG
* * * * *
11859296 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAATTTATTTTCATGAGAATTATTTTT
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT
* * * * *
11859361 CTCTTGGATCTTGTTTGAACTTCCGAACCTTTCAAACTTTTACATGTTCTTTTATAACTTCGGTT
66 CTCTTGGATCTTGGTCGAACTTTCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGGTT
* * * *
11859426 CCTTAAAGTATTCAAGAC-ATCCGTTCGTTCGA-CAATTTTCTGAACATTTCATGCTCGAGAAAT
131 CCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTCGAGAAAT
* *
11859489 CGCTTCAGTTGGTCTAAATAG
196 CGCATCATTTGGTCTAAATAG
** * * * * * *
11859510 TTTGT-ATTTTGTAAACAACTCATGGTATTTGAATTAAAAAATTAGTTAGGTAAGAATTGTTACT
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT
* * * ** *
11859574 CTCTTGGTTCCTGG-CTAAACTCCCGAACTTTTCAAACTTTTACTAG---TTTTATAACTTCGGT
66 CTCTTGGATCTTGGTC-GAACTTTCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* * * * ** *
11859635 TCGTTAAAGTACTCAGGACGATCCAATCCTTAAAGCAATTTTCCGAACATTCCATGCTCGGGAAA
130 TCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTCGAGAAA
* * *
11859700 TTGCATTATTTGGTGTAAATAG
195 TCGCATCATTTGGTCTAAATAG
* ** *
11859722 TTTTTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATATGAGAATAGTTTCT
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT
* * * * * *
11859787 CTCTTAGATATTGGCCGAACTTCCGAACTTTTCAAAGTTTAACAAG
66 CTCTTGGATCTTGGTCGAACTTTCGAACTTTTCAAACTTTTACAAG
11859833 GTTGATATGA
Statistics
Matches: 985, Mismatches: 174, Indels: 42
0.82 0.14 0.03
Matches are distributed among these distances:
209 173 0.18
210 36 0.04
211 9 0.01
212 50 0.05
213 167 0.17
214 52 0.05
215 24 0.02
216 442 0.45
217 32 0.03
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (216 bp):
TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCT
CTCTTGGATCTTGGTCGAACTTTCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGGTT
CCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTCGAGAAAT
CGCATCATTTGGTCTAAATAG
Found at i:11859396 original size:425 final size:423
Alignment explanation
Indices: 11858438--11859832 Score: 1599
Period size: 425 Copynumber: 3.3 Consensus size: 423
11858428 ACTTTGTCTT
* * ** *
11858438 TTTGTAATTTTGTAAAGAACTTTTGGTCTTTGAAGAAAAAAACTTATTTATGTGAGAATTATTTC
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAA-TTAAAAACTTATTTATATGAGAATTATTTC
* * ** * *
11858503 TCTCTTGGCTCTTGGGTGAACTTTTGAACTTTTCAAACTTGTACAAGTTCTTTTATAACTTCGAT
65 TCTCTTGGATCTTGGCTGAACTTCCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* ** *
11858568 TCCTTAAAGTATTCAAGACAATCCATTCCTTTGAGCAATTTTCCAAACATTCCATTCTCGAGAAA
130 TCCTTAAAGTATTCAAGAC-ATCCATTCCTTCGAGCAATTTTCTGAACATTCCATGCTCGAGAAA
*
11858633 TTGCATCATTTGGTCTAAATAGTTTATCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
194 TTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGG-CTTTGAATT--AAA--
* * * * * * *
11858698 TATTTACGTGAGAATTTTTTCTCTCTTCGTTCTTGGTCGAACTTTTGAACTTTTCAAACTTTTAT
254 -GTTT-CGTGAGAATTGTTTCTCTCTTGGTTCTTTGACAAACTTTTGAACTTTTCAAACTTTTAC
* ** ** ** * *
11858763 GAGTTCGATTATAACTTTAGTTCCTTAAAGTATTCAAGATTATCCGTTCCTTCGAGCAATTTTTC
317 AAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAAGATCCATTCCTTCAAGCAA-TTTTC
* * * *
11858828 GAACCTTCAATGCTCGAGATATCGCATCATTTGTTCTGAACAG
381 GAACATTCAATGCTCGAGATATCGCATCATTTGGTCTAAATAG
*
11858871 TTTGTCATTTTATAAACAACTTTTGGTCTTTGAA-TAAAAAGCTTATTTACT-TGAGAATTATTT
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTA-TATGAGAATTATTT
* * *
11858934 CTCTCTTGAATCTTGGCTGAACATT-CAAACTTTTCAAAGTTTTACAAGTTCTTTTATAACTTCG
64 CTCTCTTGGATCTTGGCTGAAC-TTCCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCG
* * *
11858998 GTTCCTTAAAGTATTCAAGACGATTCACTCCTTCGAGCAATTTTTTGAACATTCCATGCTCGAGA
128 GTTCCTTAAAGTATTCAAGAC-ATCCATTCCTTCGAGCAATTTTCTGAACATTCCATGCTCGAGA
* *
11859063 AATTGCATCATTTGGTCTAAACAGTTTGTCATTTTGTAAAGAACTTTTGGCGTTTGAATT-AAGT
192 AATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGC-TTTGAATTAAAGT
* * * *
11859127 TTCGTGAGAATTGTTTGTCTCTTGGATCTTTGACAAACTTTTGAACTTCTCAAACTCTTACAAGT
256 TTCGTGAGAATTGTTTCTCTCTTGGTTCTTTGACAAACTTTTGAACTTTTCAAACTTTTACAAGT
* *
11859192 TCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAAGATCCATTTCTTCTAGCAATTTTCAGAAC
321 TCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAAGATCCATTCCTTCAAGCAATTTTC-GAAC
* *
11859257 ATTCAATGCTCAAGATATCACATCATTTGGTCTAAATAG
385 ATTCAATGCTCGAGATATCGCATCATTTGGTCTAAATAG
* *
11859296 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAATTTATTT-TCATGAGAATTATTTT
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAT-ATGAGAATTATTTC
** * *
11859360 TCTCTTGGATCTTGTTTGAACTTCCGAACCTTTCAAACTTTTACATGTTCTTTTATAACTTCGGT
65 TCTCTTGGATCTTGGCTGAACTTCCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* * *
11859425 TCCTTAAAGTATTCAAGACATCCGTTCGTTCGA-CAATTTTCTGAACATTTCATGCTCGAGAAAT
130 TCCTTAAAGTATTCAAGACATCCATTCCTTCGAGCAATTTTCTGAACATTCCATGCTCGAGAAAT
* * * ** *
11859489 CGCTTCAGTTGGTCTAAATAGTTTGT-ATTTTGTAAACAACTCATGGTATTTGAATTAAAAAATT
195 TGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGG-CTTTGAATT----AA--
** * * * * ***
11859553 AGTTAGGTAAGAATTGTTACTCTCTTGGTTC-CTGGCTAAACTCCCGAACTTTTCAAACTTTTAC
253 AGTTTCGTGAGAATTGTTTCTCTCTTGGTTCTTTGAC-AAACTTTTGAACTTTTCAAACTTTTAC
* * * * * * *
11859617 TAG---TTTTATAACTTCGGTTCGTTAAAGTACTCAGGACGATCCAATCCTTAAAGCAATTTTCC
317 AAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAAGATCCATTCCTTCAAGCAATTTT-C
* * * * * *
11859679 GAACATTCCATGCTCGGGAAATTGCATTATTTGGTGTAAATAG
381 GAACATTCAATGCTCGAGATATCGCATCATTTGGTCTAAATAG
*
11859722 TTTTTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATATGAGAA-TAGTTTC
1 TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATATGAGAATTA-TTTC
* * * * *
11859786 TCTCTTAGATATTGGCCGAACTTCCGAACTTTTCAAAGTTTAACAAG
65 TCTCTTGGATCTTGGCTGAACTTCCGAACTTTTCAAACTTTTACAAG
11859833 GTTGATATGA
Statistics
Matches: 825, Mismatches: 116, Indels: 49
0.83 0.12 0.05
Matches are distributed among these distances:
422 25 0.03
423 52 0.06
424 17 0.02
425 262 0.32
426 187 0.23
427 3 0.00
428 3 0.00
429 51 0.06
431 6 0.01
432 185 0.22
433 34 0.04
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (423 bp):
TTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATATGAGAATTATTTCT
CTCTTGGATCTTGGCTGAACTTCCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTCGGTT
CCTTAAAGTATTCAAGACATCCATTCCTTCGAGCAATTTTCTGAACATTCCATGCTCGAGAAATT
GCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGCTTTGAATTAAAGTTTCGT
GAGAATTGTTTCTCTCTTGGTTCTTTGACAAACTTTTGAACTTTTCAAACTTTTACAAGTTCTTT
TATAACTTCGGTTCCTTAAAGTATTCAAGAAGATCCATTCCTTCAAGCAATTTTCGAACATTCAA
TGCTCGAGATATCGCATCATTTGGTCTAAATAG
Found at i:11861314 original size:216 final size:216
Alignment explanation
Indices: 11860928--11862065 Score: 1349
Period size: 215 Copynumber: 5.3 Consensus size: 216
11860918 CGGTTTCTTT
* * * * * *
11860928 GAGCAATTTTTTGAACATTCCATGCTCAAGAAATTGTATCATTTGGTCTAAATAGGTTGTCATTT
1 GAGCAATTTTCTGAACATTTCATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* *
11860993 TGTAAACAACTTTTGGTCTTTGAAGTAAAAACTTATTTACATGAGAATTGTTTCTCTCTT-GATT
66 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTAG-TT
* *
11861057 CTAGGCCGAACTTTCGAACTTGTC-AACTTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAG
130 CTTGGCCGAACTTTCGAACTTGTCAAAC-TTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAG
* * *
11861121 TATTTAAGACGATCCATTACTTC
194 TATTCAAGATGATCCATTCCTTC
* * * * * * *
11861144 GAGTAACTTTCCGAACATTTCATACTTGGGAAATCACATCATTTGGTCTAAATAGTTTGTCATTT
1 GAGCAATTTTCTGAACATTTCATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
*
11861209 TGTAAACAACTTTTGGCCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTAGTTC
66 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTAGTTC
*
11861274 TTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTCTAACTTCGGTTCCTTAAAGTA
131 TTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTA
*
11861339 TTCAAGATAATCCATTCCTTC
196 TTCAAGATGATCCATTCCTTC
** * ** *
11861360 GAGCAATTTTC-GTTCA-TTCAGTGCTCGAGATATCAAATCATCTGGTCTAAATAGTTTGTCATT
1 GAGCAATTTTCTGAACATTTCA-TGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
* * * *
11861423 TTGCAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAACTGTTTCTCTCTTGGTT
65 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTAGTT
* * * * *
11861488 CTTGGACGAACTTCCAAACGTGTCAAACTTTTACGAGTTC-CTTATAACTTCGGTT-CTGTAAAG
130 CTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCT-TAAAG
* *
11861551 TATTCAAGATGATCTATTCATTC
194 TATTCAAGATGATCCATTCCTTC
* * * ** ** *
11861574 GAGCAATTTTTTGAACA-TTCTATGCTCAAGATATCGCATCATTTACTCCGAATAGTTTGCCATT
1 GAGCAATTTTCTGAACATTTC-ATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
* * * ** * * *
11861638 TTGTAAATAAATTTTGGTCTTTAAAGAAAAAACTTATTTATGTGAGAATTATTTCTCTCTTAGAT
65 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTAGTT
* * * * * *
11861703 CTTTGCCGAACTTTCAAACTTTTCAAACTTTTACAAGTTTTTTTTATAACTTTGGTTCCTTAAAG
130 CTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAG-TTCTTTTATAACTTCGGTTCCTTAAAG
11861768 TATTCAAGATGATCCATTCCTTC
194 TATTCAAGATGATCCATTCCTTC
* * * * * *
11861791 AAGCAATTTTCTGAACATTTCATTCTCGGGAAATTGCATTATTTGGTCTAAATAGTTTGTCCTTT
1 GAGCAATTTTCTGAACATTTCATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* * * * * *
11861856 TGTAAACAACTTTTGGACTTTTAATTAAAAACTTATTTACGTGAGAGTTATTTCTCT-TTTGTTT
66 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTAGTTC
* * * * * * *
11861920 TTGGCCGAACTTCCGAACTTGTCAAACTATTATGAGTTCTTTTATAACATCAGTTCCCTAAGGTA
131 TTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTA
* * *
11861985 TTTAAGACGATCCATTCCTTT
196 TTCAAGATGATCCATTCCTTC
* * * * *
11862006 GA-CTAATTTTCTGAACATTACGTTCTTGAGAAATCGCATCATTTGGTTTAAATAGTTTGT
1 GAGC-AATTTTCTGAACATTTCATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGT
11862066 TTTGGACTTT
Statistics
Matches: 782, Mismatches: 129, Indels: 23
0.84 0.14 0.02
Matches are distributed among these distances:
213 2 0.00
214 53 0.07
215 351 0.45
216 232 0.30
217 139 0.18
218 5 0.01
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (216 bp):
GAGCAATTTTCTGAACATTTCATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTAGTTC
TTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTA
TTCAAGATGATCCATTCCTTC
Found at i:11863278 original size:216 final size:216
Alignment explanation
Indices: 11862065--11863922 Score: 2047
Period size: 216 Copynumber: 8.7 Consensus size: 216
11862055 AAATAGTTTG
* * * * *
11862065 TTTTGGACTTTTAATTAAAAACTTATTTATGTGAGAGTTATTTCTCTCTTGGTTCTTGGCCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
* * * * *
11862130 TTCCGAACTTGTCAAACTATTTATGAGTTATTTTATAACTTTGGTTCCTTAAAGTATTCAAGACT
66 TTTCGAACTTGTCAAACT-TTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACG
* * * * ** *
11862195 ATCCATTCCTTCGAGCAATTTTCCAAACATTTAATGCTAGAGAAATCTTATCATTTGGTCAAAAT
130 ATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAAT
*
11862260 AGTTTGTCATTTTGTAAACAAT
195 AGTTTGTCATTTTGTAAACAAC
* * ***
11862282 TTTTGCTCTTTGAATTAAAAACTTATTTACGTGAGAA-------T-T-ATAAATCTTGGCCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
* * * ** *
11862338 TTTCGAACTTTTCAAACTTTTACAAGATCTTCGATAACTTCGGTTCCTTAAATTATTCAAGACGA
66 TTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGA
** ** * * *
11862403 TCCATTCCTTCGAGCAA-TTTTCGAACATTGTATGCTC-AGGAAATTACATTATTTTGTCTAAAC
131 TCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGA-GAAATCGCATCATTTGGTCTAAAT
* *
11862466 AGTTTGTCATTTTGTTAACTAC
195 AGTTTGTCATTTTGTAAACAAC
* * *
11862488 TTTTGGACTTTAAATTAAAAACTTATTTACGTGATAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
* * * * *
11862553 TTTCGAACTTGTTAATCTTATACGAGTTCTTTTATAA-TATCGGTTCCTTAAATTATTCAAGATG
66 TTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACT-TCGGTTCCTTAAAGTATTCAAGACG
* *
11862617 ATCCATTACTTCGAGCAATTTTTTGAACATTCCAA-GCTCGAGAAATCGCATCATTTGGTCTAAA
130 ATCCATTCCTTCGAGCAATTTTTCGAACATT-CAATGCTCGAGAAATCGCATCATTTGGTCTAAA
* **
11862681 TAGTTT-ACCCTTTGT--A-AAC
194 TAGTTTGTCATTTTGTAAACAAC
*
11862700 TTTTGGACTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
* * * * ** *
11862765 TTTCGAACTTTTCAAACTTGTATGACTTCTTTTATAACTGGGGTTCCTTAAGGTATTCAAGACGA
66 TTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGA
**** * *
11862830 T---TTCCTTTTTTC-ATTTTTCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAAT
131 TCCATTCCTTCGAGCAATTTTT-CGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAAT
*
11862891 AGTTTGTCGTTTTGTAAACAAC
195 AGTTTGTCATTTTGTAAACAAC
* ** *
11862913 TTTTTGTCTTCAAATTAAAAACTTATTTTCGTGAGAATTGTTTTTCTCTCTTGGTTCTTGGCCGA
1 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTG--TTTCTCTCTTGGTTCTTGGCCGA
* * * * * *
11862978 ACTTTCGAACATGACGAACTTTAACGAGTTCGTTTATAACATT-AGTTCCTTAAAGTATTCAAGA
64 ACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAAC-TTCGGTTCCTTAAAGTATTCAAGA
* * *
11863042 TGATCCATTCCTTTGAGCAATTTTTCGAACATTCAATGCTTGAGATAA-CGCATCATTTGGTCTA
128 CGATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGAGA-AATCGCATCATTTGGTCTA
*
11863106 AATAATTTGTCATTTTGTAAACAAC
192 AATAGTTTGTCATTTTGTAAACAAC
* * * * * *
11863131 TTTTGGTCTTTGAATAAAAAACTTATTTACGTAAGAATTATTCCTCTCTTGGATCTTGGTCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
* * * * * *
11863196 ATCCTAACTTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCATGGCGA
66 TTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGA
* * * * *
11863261 TCCATTCCTTAGAGCAA-TTTTCTAAACATTTC-ATGTTCGACAAATCGCATCAGTTGGTCTAAA
131 TCCATTCCTTCGAGCAATTTTTC-GAACA-TTCAATGCTCGAGAAATCGCATCATTTGGTCTAAA
*
11863324 TAGTTTGTCATTTTGTAAACAAG
194 TAGTTTGTCATTTTGTAAACAAC
* * *
11863347 TATTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTTTGGTTCTTGGCTGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
* * * * ** *
11863412 TTTTGAACTTGTCTAACTTTTATGAGTTCGTTTATAACTTTAGTTCCTTAAAGTATTCAAGATGA
66 TTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGA
* * *
11863477 TCCATTCCTTCAAGCAA-TTTTCTAAACATTCAATGCTCGAGAAATCGCATCTTTTGGTCTAAAT
131 TCCATTCCTTCGAGCAATTTTTC-GAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAAT
*
11863541 AGTTTGTCATTTTGTAAATAA-
195 AGTTTGTCATTTTGTAAACAAC
* * * **
11863562 TTTT-GTCTTTAAATTAAAAACTTATTTGCATGAGAATTGTTTCTCTCTTGGTTCTTAACCGATA
1 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGA-A
* * * * *
11863626 -TTTCGAACTTGT-AAGAATTTTACGAGTTCTTTTATAAGTTTGGTTCCTTAAAGTGTTGAAGAC
65 CTTTCGAACTTGTCAA-ACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAC
* * * * * * * *
11863689 AATCCATTCCTTCTAGCAAATTTCCGAACATTCAATGCTCCAGAAATCACATCTTTTAGTCTAAA
129 GATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAA
* *
11863754 TAGTTTGTAATTTTGTAAGCAA-
194 TAGTTTGTCATTTTGTAAACAAC
* * * * *
11863776 TTGTTGGTGTTTGAATTAAAAACTTATTTACGTGAAAATTGTTTCTCTCTTGGTTTTTTGTCGAG
1 TT-TTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGA-
* * * *
11863841 A-TTTTGAACTCGTCAAACTTTTACGAGTAT-TTTTATAATTTCGATTCCTTAAAGTATTCAAGA
64 ACTTTCGAACTTGTCAAACTTTTACGAGT-TCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGA
11863904 CGATCCATTCCGTT-GAGCA
128 CGATCCATTCC-TTCGAGCA
11863923 TTTACCTGAG
Statistics
Matches: 1376, Mismatches: 223, Indels: 85
0.82 0.13 0.05
Matches are distributed among these distances:
205 1 0.00
206 84 0.06
207 55 0.04
208 37 0.03
209 48 0.03
210 7 0.01
212 119 0.09
213 42 0.03
214 178 0.13
215 187 0.14
216 471 0.34
217 42 0.03
218 97 0.07
219 8 0.01
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (216 bp):
TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAAC
TTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGA
TCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATA
GTTTGTCATTTTGTAAACAAC
Found at i:11863791 original size:646 final size:643
Alignment explanation
Indices: 11860928--11863922 Score: 3251
Period size: 646 Copynumber: 4.7 Consensus size: 643
11860918 CGGTTTCTTT
* * * * * *
11860928 GAGCAATTTTTTGAACATTCCATGCTCAAGAAATTGTATCATTTGGTCTAAATAGGTTGTCATTT
1 GAGCAATTTTCTGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* * * *
11860993 TGTAAACAACTTTTGGTCTTTGAAGTAAAAACTTATTTACATGAGAATTGTTTCTCTCTTGATTC
66 TGTAAACAACTTTT-GTCTTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTC
** **
11861058 -TAGGCCGAACTTTCGAACTTGTCAACTTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAGT
130 TTA-GCCGAACTTTCGAACTTGTCAAAATTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGT
* * * * * * * *
11861122 ATTTAAGACGATCCATTACTTCGAGTAACTTTCCGAACATTTCATACTTGGGAAATCACATCATT
194 ATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACA-TTCATGCTCGAGAAATCACATCTTT
*
11861187 TGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGCCTTTGAATTAAAAACTTATTTACGTG
258 TGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGACTTTGAATTAAAAACTTATTTACGTG
*
11861252 AGAATTGTTTCTCTCTTAGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
323 AGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* ** **
11861317 CTAACTTCGGTTCCTTAAAGTATTCAAGATAATCCATTCCTTCGAGCAATTTTC-GTTCATTCAG
388 ATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCA-
* ** * * * *
11861381 TGCTCGAGATATCAAATCATCTGGTCTAAATAGTTTGTCATTTTGCAAACAACTTTTGGTCTTTG
452 TGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC--GTATTGGTCTTTG
* * * * *
11861446 AATTAAAAACTTATTTATGTGAGAACTGTTTCTCTCTTGGTTCTTGGACGAACTTCCAAACGTGT
515 AATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCGAACTTGT
* * * * *
11861511 CAAACTTTTACGAGTTC-CTTATAACTTCGGTT-CTGTAAAGTATTCAAGATGATCTATTCATTC
580 CAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCT-TAAAGTATTCAAGATGATCCATTCCTTC
* * * * ** ** *
11861574 GAGCAATTTTTTGAACATTCTATGCTCAAGATATCGCATCATTTACTCCGAATAGTTTGCCATTT
1 GAGCAATTTTCTGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* * ** * * * *
11861639 TGTAAATAAATTTTGGTCTTTAAAGAAAAAACTTATTTATGTGAGAATTATTTCTCTCTTAGATC
66 TGTAAACAACTTTT-GTCTTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * *
11861704 TTTGCCGAACTTTCAAACTTTTCAAACTTTTACAAGTTTTTTTTATAACTTTGGTTCCTTAAAGT
130 TTAGCCGAACTTTCGAACTTGTCAAAATTTTACGAG-TTCTTTTATAACTTTGGTTCCTTAAAGT
* * * * * * **
11861769 ATTCAAGATGATCCATTCCTTCAAGCAATTTTCTGAACATTTCATTCTCGGGAAATTGCAT-TAT
194 ATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACA-TTCATGCTCGAGAAATCACATCT-T
* *
11861833 TTGGTCTAAATAGTTTGTCCTTTTGTAAACAACTTTTGGACTTTTAATTAAAAACTTATTTACGT
257 TTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGACTTTGAATTAAAAACTTATTTACGT
* * * * * * *
11861898 GAGAGTTATTTCTCT-TTTGTTTTTGGCCGAACTTCCGAACTTGTCAAACTATTATGAGTTCTTT
322 GAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * * * *
11861962 TATAACATCAGTTCCCTAAGGTATTTAAGACGATCCATTCCTTTGA-CTAATTTTCTGAACATTA
387 TATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC-AATTTTCTGAACATT-
* * * * *
11862026 CGTTCTTGAGAAATCGCATCATTTGGTTTAAATAGTTTG---TTTTG-----G-A-----CTTTT
450 CATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACGTATTGGTCTTTG
* * *
11862077 AATTAAAAACTTATTTATGTGAGAGTTATTTCTCTCTTGGTTCTTGGCCGAACTTCCGAACTTGT
515 AATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCGAACTTGT
*
11862142 CAAACTATTTATGAGTTATTTTATAACTTTGGTTCCTTAAAGTATTCAAGACT-ATCCATTCCTT
580 CAAACT-TTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA-TGATCCATTCCTT
11862206 C
643 C
** * * ** *
11862207 GAGCAATTTTCCAAACATTTAATGCTAGAGAAATCTTATCATTTGGTCAAAATAGTTTGTCATTT
1 GAGCAATTTTCTGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* * * ***
11862272 TGTAAACAATTTTTGCTCTTTGAATTAAAAACTTATTTACGTGAGAA-T-TATAAATCTT-G---
66 TGTAAACAACTTTTG-TCTTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTC
* * * * ** * *
11862331 ---GCCGAACTTTCGAACTTTTCAAACTTTTACAAGATCTTCGATAACTTCGGTTCCTTAAATTA
130 TTAGCCGAACTTTCGAACTTGTCAAAATTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTA
* * *
11862393 TTCAAGACGATCCATTCCTTCGAGC-AATTTTCGAACATTGTATGCTC-AGGAAATTACAT-TAT
195 TTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATT-CATGCTCGA-GAAATCACATCT-T
* * * * *
11862455 TTTGTCTAAACAGTTTGTCATTTTGTTAACTACTTTTGGACTTTAAATTAAAAACTTATTTACGT
257 TTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGACTTTGAATTAAAAACTTATTTACGT
* * * *
11862520 GATAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTTAATCTTATACGAGTTCTTT
322 GAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * *
11862585 TATAA-TATCGGTTCCTTAAATTATTCAAGATGATCCATTACTTCGAGCAATTTTTTGAACATTC
387 TATAACT-TCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATT-
* * ** * *
11862649 CAAGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTT-ACCCTTTGTAAAC-TTTTGGACTTTG
450 CATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACGTATTGGTCTTTG
* *
11862712 AATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTTT
515 AATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCGAACTTGT
* * ** * * *
11862777 CAAACTTGTATGACTTCTTTTATAACTGGGGTTCCTTAAGGTATTCAAGACGAT---TTCCTTT
580 CAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
*** * * * * *
11862838 TTTCATTTTTCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCGTTT
1 GAGCAATTTTCTGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* *
11862903 TGTAAACAACTTTTTGTCTTCAAATTAAAAACTTATTTTCGTGAGAATTGTTTTTCTCTCTTGGT
66 TGTAAACAAC-TTTTGTCTTTAAATTAAAAACTTATTTACGTGAGAATTG--TTTCTCTCTTGGT
* * * * * * * * *
11862968 TCTTGGCCGAACTTTCGAACATGACGAACTTTAACGAGTTCGTTTATAACATTAGTTCCTTAAAG
128 TCTTAGCCGAACTTTCGAACTTGTCAAAATTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAG
* * * * * * *
11863033 TATTCAAGATGATCCATTCCTTTGAGCAATTTTTCGAACATTCAATGCTTGAGATAA-CGCATCA
193 TATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATTC-ATGCTCGAGA-AATCACATCT
* * *
11863097 TTTGGTCTAAATAATTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATAAAAAACTTATTTACG
256 TTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGACTTTGAATTAAAAACTTATTTACG
* * * * * * * * *
11863162 TAAGAATTATTCCTCTCTTGGATCTTGGTCGAACATCCTAACTTTTCAAACTTTTACGAGTTCTT
321 TGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * * *
11863227 TTATAACTTCGGTTCCTTAAAGTATTCATGGCGATCCATTCCTTAGAGCAATTTTCTAAACATTT
386 TTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACA-TT
* * *
11863292 CATGTTCGACAAATCGCATCAGTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTATTGGTCTT
450 CATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC--GTATTGGTCTT
* * **
11863357 TGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTTTGGTTCTTGGCTGAACTTTTGAACTT
513 TGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCGAACTT
* * *
11863422 GTCTAACTTTTATGAGTTCGTTTATAACTTTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTT
578 GTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTT
11863487 C
643 C
* * *
11863488 AAGCAATTTTCTAAACATTCAATGCTCGAGAAATCGCATCTTTTGGTCTAAATAGTTTGTCATTT
1 GAGCAATTTTCTGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* * *
11863553 TGTAAATAA-TTTTGTCTTTAAATTAAAAACTTATTTGCATGAGAATTGTTTCTCTCTTGGTTCT
66 TGTAAACAACTTTTGTCTTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCT
* *
11863617 TAACCGATA-TTTCGAACTTGT-AAGAATTTTACGAGTTCTTTTATAAGTTTGGTTCCTTAAAGT
131 TAGCCGA-ACTTTCGAACTTGTCAA-AATTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGT
* * * * *
11863680 GTTGAAGACAATCCATTCCTTCTAGCAAATTTCCGAACATTCAATGCTCCAGAAATCACATCTTT
194 ATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATTC-ATGCTCGAGAAATCACATCTTT
* * * **
11863745 TAGTCTAAATAGTTTGTAATTTTGTAAGCAA-TTGTTGGTGTTTGAATTAAAAACTTATTTACGT
258 TGGTCTAAATAGTTTGTCATTTTGTAAACAACTT-TTGGACTTTGAATTAAAAACTTATTTACGT
* * * * * *
11863809 GAAAATTGTTTCTCTCTTGGTTTTTTGTCGAGA-TTTTGAACTCGTCAAACTTTTACGAGTAT-T
322 GAGAATTGTTTCTCTCTTGGTTCTTGGCCGA-ACTTTCGAACTTGTCAAACTTTTACGAGT-TCT
* *
11863872 TTTATAATTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCGTT-GAGCA
385 TTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCC-TTCGAGCA
11863923 TTTACCTGAG
Statistics
Matches: 1955, Mismatches: 330, Indels: 128
0.81 0.14 0.05
Matches are distributed among these distances:
621 2 0.00
622 97 0.05
623 170 0.09
624 33 0.02
625 4 0.00
630 1 0.00
631 170 0.09
632 17 0.01
633 126 0.06
634 43 0.02
635 76 0.04
636 1 0.00
642 71 0.04
643 218 0.11
644 21 0.01
645 6 0.00
646 485 0.25
647 308 0.16
648 37 0.02
650 69 0.04
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (643 bp):
GAGCAATTTTCTGAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
TGTAAACAACTTTTGTCTTTAAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCT
TAGCCGAACTTTCGAACTTGTCAAAATTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTAT
TCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATTCATGCTCGAGAAATCACATCTTTTGG
TCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGACTTTGAATTAAAAACTTATTTACGTGAGA
ATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATA
ACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCATGCT
CGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACGTATTGGTCTTTGAATTAA
AAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACT
TTTATGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
Found at i:11863848 original size:430 final size:429
Alignment explanation
Indices: 11860928--11863922 Score: 3144
Period size: 430 Copynumber: 7.0 Consensus size: 429
11860918 CGGTTTCTTT
* * * * * * *
11860928 GAGCAATTTTTTGAACATTCCATGCTCAAGAAATTGTATCATTTGGTCTAAATAGGTTGTCATTT
1 GAGCAATTTTCTAAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* * *
11860993 TGTAAACAACTTTTGGTCTTTGAAGTAAAAACTTATTTACATGAGAATTGTTTCTCTCTTGATTC
66 TGTAAACAACTTTT-GTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTC
* * *
11861058 TAGGCCGAACTTTCGAACTTGTC-AACTTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAGT
130 TTGGCCGAACTTTCGAACTTTTCAAAC-TTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGT
* * * * * ***
11861122 ATTTAAGACGATCCATTACTTCGAGTAACTTTCCGAACATTTCATACTTGGGAAATCACATCATT
194 ATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACA-TTCATGCTCCAGAAATCACATCATT
* *
11861187 TGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGCCTTTGAATTAAAAACTTATTTACGTG
258 TGGTCTAAATAGTTTGTCATTTTGTAAACAA-TTTTGGTCTTTAAATTAAAAACTTATTTACGTG
*
11861252 AGAATTGTTTCTCTCTTAGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
322 AGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* ** *
11861317 CTAACTTCGGTTCCTTAAAGTATTCAAGATAATCCATTCCTTC
387 ATAACTTTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
* * * ** *
11861360 GAGCAATTTTCGT--TCATTCAGTGCTCGAGATATCAAATCATCTGGTCTAAATAGTTTGTCATT
1 GAGCAATTTTC-TAAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
* * *
11861423 TTGCAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAACTGTTTCTCTCTTGGTT
65 TTGTAAACAACTTTT-GTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTT
* * * * * *
11861488 CTTGGACGAACTTCCAAACGTGTCAAACTTTTACGAGTTC-CTTATAACTTCGGTT-CTGTAAAG
129 CTTGGCCGAACTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCT-TAAAG
* * * * ** * * *
11861551 TATTCAAGATGATCTATTCATTCGAGCAATTTTTTGAACATTCTATGCTCAAGATATCGCATCAT
193 TATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATTC-ATGCTCCAGAAATCACATCAT
** ** * * ** *
11861616 TTACTCCGAATAGTTTGCCATTTTGTAAATAAATTTTGGTCTTTAAAGAAAAAACTTATTTATGT
257 TTGGTCTAAATAGTTTGTCATTTTGTAAA-CAATTTTGGTCTTTAAATTAAAAACTTATTTACGT
* * * * * * * *
11861681 GAGAATTATTTCTCTCTTAGATCTTTGCCGAACTTTCAAACTTTTCAAACTTTTACAAGTTTTTT
321 GAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAG-TTCTT
*
11861746 TTATAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
385 TTATAACTTTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
* * * * * * *
11861791 AAGCAATTTTCTGAACATTTC-ATTCTCGGGAAATTGCATTATTTGGTCTAAATAGTTTGTCCTT
1 GAGCAATTTTCTAAACA-TTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
* * * * *
11861855 TTGTAAACAACTTTTGGACTTTTAATTAAAAACTTATTTACGTGAGAGTTATTTCTCT-TTTGTT
65 TTGTAAACAACTTTT-GTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTT
* * * * * * * * *
11861919 TTTGGCCGAACTTCCGAACTTGTCAAACTATTATGAGTTCTTTTATAACATCAGTTCCCTAAGGT
129 CTTGGCCGAACTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGT
* * * * * * ** *
11861984 ATTTAAGACGATCCATTCCTTTGA-CTAATTTTCTGAACATTACGTTCTTGAGAAATCGCATCAT
194 ATTCAAGACGATCCATTCCTTCGAGC-AAATTTCCGAACATT-CATGCTCCAGAAATCACATCAT
* * *
11862048 TTGGTTTAAATAGTTTG---TTTTG--GAC--------T-TTT-AATTAAAAACTTATTTATGTG
257 TTGGTCTAAATAGTTTGTCATTTTGTAAACAATTTTGGTCTTTAAATTAAAAACTTATTTACGTG
* * * * *
11862098 AGAGTTATTTCTCTCTTGGTTCTTGGCCGAACTTCCGAACTTGTCAAACTATTTATGAGTTATTT
322 AGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACT-TTTACGAGTTCTTT
*
11862163 TATAACTTTGGTTCCTTAAAGTATTCAAGACT-ATCCATTCCTTC
386 TATAACTTTAGTTCCTTAAAGTATTCAAGA-TGATCCATTCCTTC
* * * ** *
11862207 GAGCAATTTTCCAAACATTTAATGCTAGAGAAATCTTATCATTTGGTCAAAATAGTTTGTCATTT
1 GAGCAATTTTCTAAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* * ***
11862272 TGTAAACAATTTTTGCTCTTTGAATTAAAAACTTATTTACGTGAGAA-------T-T-ATAAATC
66 TGTAAACAACTTTTG-TCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTC
* * ** *
11862328 TTGGCCGAACTTTCGAACTTTTCAAACTTTTACAAGATCTTCGATAACTTCGGTTCCTTAAATTA
130 TTGGCCGAACTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTA
* * * *
11862393 TTCAAGACGATCCATTCCTTCGAGC-AATTTTCGAACATTGTATGCT-CAGGAAATTACATTATT
195 TTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATT-CATGCTCCA-GAAATCACATCATT
* * * * *
11862456 TTGTCTAAACAGTTTGTCATTTTGTTAACTACTTTTGGACTTTAAATTAAAAACTTATTTACGTG
258 TGGTCTAAATAGTTTGTCATTTTGTAAAC-AATTTTGGTCTTTAAATTAAAAACTTATTTACGTG
* * * *
11862521 ATAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTTAATCTTATACGAGTTCTTTT
322 AGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
** * *
11862586 ATAA-TATCGGTTCCTTAAATTATTCAAGATGATCCATTACTTC
387 ATAACT-TTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
* * * **
11862629 GAGCAATTTTTTGAACATTCCAA-GCTCGAGAAATCGCATCATTTGGTCTAAATAGTTT-ACCCT
1 GAGCAATTTTCTAAACATT-CAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
*
11862692 TTGT--A-AACTTTTGGACTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTT
65 TTGTAAACAACTTTT-GTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTT
* * * ** *
11862754 CTTGGCCGAACTTTCGAACTTTTCAAACTTGTATGACTTCTTTTATAACTGGGGTTCCTTAAGGT
129 CTTGGCCGAACTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGT
**** ** ** *
11862819 ATTCAAGACGAT---TTCCTTTTTTCATTTTTCCGAACATTCCATGCTCGGGAAATCGCATCATT
194 ATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATT-CATGCTCCAGAAATCACATCATT
* * * *
11862881 TGGTCTAAATAGTTTGTCGTTTTGTAAACAACTTTTTGTCTTCAAATTAAAAACTTATTTTCGTG
258 TGGTCTAAATAGTTTGTCATTTTGTAAACAA-TTTTGGTCTTTAAATTAAAAACTTATTTACGTG
* * * * *
11862946 AGAATTGTTTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACATGACGAACTTTAACGAGTTCGT
322 AGAATTG--TTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* *
11863011 TTATAACATTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTT
385 TTATAACTTTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
* * *
11863056 GAGCAATTTT-TCGAACATTCAATGCTTGAGATAA-CGCATCATTTGGTCTAAATAATTTGTCAT
1 GAGCAATTTTCT-AAACATTCAATGCTCGAGA-AATCGCATCATTTGGTCTAAATAGTTTGTCAT
* * * * *
11863119 TTTGTAAACAACTTTTGGTCTTTGAATAAAAAACTTATTTACGTAAGAATTATTCCTCTCTTGGA
64 TTTGTAAACAACTTTT-GTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGT
* * * *
11863184 TCTTGGTCGAACATCCTAACTTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAG
128 TCTTGGCCGAACTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAG
* * * * ** * * * * *
11863249 TATTCATGGCGATCCATTCCTTAGAGCAATTTTCTAAACATTTCATGTTCGACAAATCGCATCAG
193 TATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACA-TTCATGCTCCAGAAATCACATCAT
* *
11863314 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTATTGGTCTTTGAATTAAAAACTTATTTACGT
257 TTGGTCTAAATAGTTTGTCATTTTGTAAACAA-TTTTGGTCTTTAAATTAAAAACTTATTTACGT
* * * * * *
11863379 GAGAATTGTTTCTCTTTTGGTTCTTGGCTGAACTTTTGAACTTGTCTAACTTTTATGAGTTCGTT
321 GAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
11863444 TATAACTTTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
386 TATAACTTTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
* *
11863488 AAGCAATTTTCTAAACATTCAATGCTCGAGAAATCGCATCTTTTGGTCTAAATAGTTTGTCATTT
1 GAGCAATTTTCTAAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
* * * *
11863553 TGTAAATAA-TTTTGTCTTTAAATTAAAAACTTATTTGCATGAGAATTGTTTCTCTCTTGGTTCT
66 TGTAAACAACTTTTGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCT
** * * * *
11863617 TAACCGATA-TTTCGAACTTGT-AAGAATTTTACGAGTTCTTTTATAAGTTTGGTTCCTTAAAGT
131 TGGCCGA-ACTTTCGAACTTTTCAA-ACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGT
* * * * *
11863680 GTTGAAGACAATCCATTCCTTCTAGCAAATTTCCGAACATTCAATGCTCCAGAAATCACATCTTT
194 ATTCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATTC-ATGCTCCAGAAATCACATCATT
* * * * *
11863745 TAGTCTAAATAGTTTGTAATTTTGTAAGCAATTGTTGGTGTTTGAATTAAAAACTTATTTACGTG
258 TGGTCTAAATAGTTTGTCATTTTGTAAACAATT-TTGGTCTTTAAATTAAAAACTTATTTACGTG
* * * * * *
11863810 AAAATTGTTTCTCTCTTGGTTTTTTGTCGAGA-TTTTGAACTCGTCAAACTTTTACGAGTAT-TT
322 AGAATTGTTTCTCTCTTGGTTCTTGGCCGA-ACTTTCGAACTTGTCAAACTTTTACGAGT-TCTT
* *
11863873 TTATAA-TTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCGTT-
385 TTATAACTTTAG-TTCCTTAAAGTATTCAAGATGATCCATTCC-TTC
11863918 GAGCA
1 GAGCA
11863923 TTTACCTGAG
Statistics
Matches: 2126, Mismatches: 362, Indels: 152
0.81 0.14 0.06
Matches are distributed among these distances:
406 1 0.00
407 38 0.02
408 76 0.04
409 2 0.00
410 5 0.00
412 2 0.00
415 3 0.00
416 199 0.09
417 10 0.00
418 37 0.02
419 2 0.00
421 8 0.00
422 98 0.05
423 66 0.03
424 8 0.00
425 88 0.04
426 5 0.00
427 202 0.10
428 8 0.00
429 20 0.01
430 452 0.21
431 355 0.17
432 331 0.16
433 7 0.00
434 101 0.05
435 2 0.00
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (429 bp):
GAGCAATTTTCTAAACATTCAATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
TGTAAACAACTTTTGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTCTTGGTTCT
TGGCCGAACTTTCGAACTTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTAT
TCAAGACGATCCATTCCTTCGAGCAAATTTCCGAACATTCATGCTCCAGAAATCACATCATTTGG
TCTAAATAGTTTGTCATTTTGTAAACAATTTTGGTCTTTAAATTAAAAACTTATTTACGTGAGAA
TTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAA
CTTTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTC
Found at i:11864227 original size:335 final size:337
Alignment explanation
Indices: 11863643--11864249 Score: 766
Period size: 335 Copynumber: 1.8 Consensus size: 337
11863633 CTTGTAAGAA
* * * *
11863643 TTTTACGAGTTCTTTTATAAGTTTGGTTCCTTAAAGTGTTGAAGACAATCCATTCCTTCTAGCAA
1 TTTTACGAGTTCTTTTATAACTTAGGTTCCTTAAAGTATTGAAGACAATCCATTCCTTCGAGCAA
* * * *
11863708 ATTTCCGAACATTCAATGCTCCAGAAATCACATCTTTTAGTCTAAATAGTTTGTAATTTTGTAAG
66 ATTTCCAAACATTCAATGCTCCAGAAATCACATCATTTAGTCAAAATAGTTTGTAATTTTGTAAA
* * * * *
11863773 CAATTGTTGGTGTTTGAATTAAAAACTTATTTACGTGAAAATTGTTTCTCTCTTGGTTTTTTGTC
131 CAATTGTTGGTCTTTGAATTAAAAACTTATTTACATGAAAATTGTTTCTCTCTTGGTTTCTGGCC
** *
11863838 GAGATTTTGAACTCGTCAAACTTTTACGAGTATTTTTATAATTTCGATTCCTTAAAGTATTCAAG
196 GAGATTCCGAACTCGTCAAACTTTTACGAGTATTTTTATAATTTCGACTCCTTAAAGTATTCAAG
11863903 ACGATCCATTCCGTTGAGCATTTACCTGAGAATTTTTTCTCTATTGGTTCTTGGCCCAACTTTTG
261 ACGATCCATTCCGTTGAGCATTTACCTGAGAATTTTTTCTCTATTGGTTCTTGGCCCAACTTTTG
11863968 AACAGGTCAAAC
326 AACAGGTCAAAC
* * * *
11863980 TTTTATGAGTTCTTTT-TAACTTAGGTTCCTTAAAGTATTCG-GGACGATCCATTCTTTCGAGCA
1 TTTTACGAGTTCTTTTATAACTTAGGTTCCTTAAAGTATT-GAAGACAATCCATTCCTTCGAGCA
* * * * * * *
11864043 ATTTTTCAAACATTTAATGCTCTAGATATCGCATCATTT-GTCAAAATAGTTTGTCATTTTGTAA
65 AATTTCCAAACATTCAATGCTCCAGAAATCACATCATTTAGTCAAAATAGTTTGTAATTTTGTAA
* *
11864107 ACAACTT-TTTGTCTTTGAATTAAAAACTTATTT-CATGAGAATTGTTTTCTCTCTTTGG-TTCT
130 ACAA-TTGTTGGTCTTTGAATTAAAAACTTATTTACATGAAAATTG-TTTCTCTC-TTGGTTTCT
* *
11864169 GGCCGA-ACTTCCGAAC-CTGTCAAACTTTTACGAGT-TTTTTTTAAGCTTTTG-CTCCTTAAAG
192 GGCCGAGA-TTCCGAACTC-GTCAAACTTTTACGAGTATTTTTATAA--TTTCGACTCCTTAAAG
* * *
11864230 TATTCTAGGCGGTCCATTCC
253 TATTCAAGACGATCCATTCC
11864250 TTCAAGCAAT
Statistics
Matches: 228, Mismatches: 34, Indels: 18
0.81 0.12 0.06
Matches are distributed among these distances:
334 19 0.08
335 114 0.50
336 79 0.35
337 16 0.07
ACGTcount: A:0.26, C:0.17, G:0.15, T:0.42
Consensus pattern (337 bp):
TTTTACGAGTTCTTTTATAACTTAGGTTCCTTAAAGTATTGAAGACAATCCATTCCTTCGAGCAA
ATTTCCAAACATTCAATGCTCCAGAAATCACATCATTTAGTCAAAATAGTTTGTAATTTTGTAAA
CAATTGTTGGTCTTTGAATTAAAAACTTATTTACATGAAAATTGTTTCTCTCTTGGTTTCTGGCC
GAGATTCCGAACTCGTCAAACTTTTACGAGTATTTTTATAATTTCGACTCCTTAAAGTATTCAAG
ACGATCCATTCCGTTGAGCATTTACCTGAGAATTTTTTCTCTATTGGTTCTTGGCCCAACTTTTG
AACAGGTCAAAC
Found at i:11864427 original size:551 final size:551
Alignment explanation
Indices: 11863371--11864462 Score: 1309
Period size: 551 Copynumber: 2.0 Consensus size: 551
11863361 TTAAAAACTT
* * ** ** *
11863371 ATTTACGTGAGAATTGTTTCTCTTTTGGTTCTTGGCTGAACTTTTGAACTTGTCTAACTTTTATG
1 ATTTACCTGAGAATTGTTTCTCTATTGGTTCTTGGCCCAACTTTTGAACAGGTCAAACTTTTATG
*
11863436 AGTTCGTTTATAACTTTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCAAGCAATTTTCTA
66 AGTTCGTTTATAACTTTAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTCTA
* * *
11863501 AACATTCAATGCTCGAGAAATCGCATCTTTTGGTCTAAATAGTTTGTCATTTTGTAAATAATTTT
131 AACATTCAATGCTCGAGAAATCGCATCATTTGGTCAAAATAGTTTGTCATTTTGTAAACAATTTT
*
11863566 GTCTTTAAATTAAAAACTTATTTGCATGAGAATTGTTTCTCTCTTGGTTCTTAACCGATATTTCG
196 GTCTTTAAATTAAAAACTTATTTGCATGAGAATTGTTTCTCTCTTGGTTCTTAACCGATATTCCG
* * * *
11863631 AACTTGTAAGAATTTTACGAGTTCTTTTATAAGTTTGGTTCCTTAAAGTGTTGAAGACAATCCAT
261 AACCTGTAAGAATTTTACGAGTTCTTTTATAAGTTTGGCTCCTTAAAGTATTCAAGACAATCCAT
* * *
11863696 TCCTTCTAGCAAATTTCCGAACATTCAATGCTCCAGAAATCACATCTTTTAGTCTAAATAGTTTG
326 TCCTTCAAGCAAATTTCCAAACATTCAATGCTCCAGAAATCACATCGTTTAGTCTAAATAGTTTG
* * * * *
11863761 TAATTTTGTAAGCAATTGTTGGTGTTTGAATTAAAAACTTATTTACGTGAAAATTGTTTCTCTCT
391 CAATTTTGTAAGCAATTGTAGGTCTTTGAATTAAAAACTTATTTACATGAAAATTGTTTCACTCT
* * * ** *
11863826 TGGTTTTTTGTCGAGATTTTGAACTCGTCAAACTTTTACGAGTATTTTTATAA-TTTCGATTCCT
456 TGGTTCTTGGCCGAGATTTCAAACTCGTCAAACTTTTAAGAGTATTTTTATAACTTT-GATTCCT
*
11863890 TAAAGTATTCAAGACGATCCATTCCGTTGAGC
520 AAAAGTATTCAAGACGATCCATTCCGTTGAGC
*
11863922 ATTTACCTGAGAATTTTTTCTCTATTGGTTCTTGGCCCAACTTTTGAACAGGTCAAACTTTTATG
1 ATTTACCTGAGAATTGTTTCTCTATTGGTTCTTGGCCCAACTTTTGAACAGGTCAAACTTTTATG
* ** * *
11863987 AGTTC-TTTTTAAC-TTAGGTTCCTTAAAGTATTCGGGACGATCCATTCTTTCGAGCAATTTT-T
66 AGTTCGTTTATAACTTTA-GTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTCT
* * *
11864049 CAAACATTTAATGCTCTAGATATCGCATCATTT-GTCAAAATAGTTTGTCATTTTGTAAACAACT
130 -AAACATTCAATGCTCGAGAAATCGCATCATTTGGTCAAAATAGTTTGTCATTTTGTAAACAA--
* **
11864113 TTTTGTCTTTGAATTAAAAACTTATTT-CATGAGAATTGTTTTCTCTCTTTGGTTC-TGGCCGA-
192 TTTTGTCTTTAAATTAAAAACTTATTTGCATGAGAATTG-TTTCTCTC-TTGGTTCTTAACCGAT
* * * *
11864175 ACTTCCGAACCTGTCAA-ACTTTTACGAGTT-TTTTTTAAGCTTTTGCTCCTTAAAGTATTCTAG
255 A-TTCCGAACCTGT-AAGAATTTTACGAGTTCTTTTATAAG-TTTGGCTCCTTAAAGTATTCAAG
* ** * * * * * *
11864238 GCGGTCCATTCCTTCAAGCAATTTTCTAAACATTCCATGCT-TAGGAAATCGCATCGTTTGGTCT
317 ACAATCCATTCCTTCAAGCAAATTTCCAAACATTCAATGCTCCA-GAAATCACATCGTTTAGTCT
* * * * *
11864302 ATATTGTTTGCCATTTTGTACA-CACTT-TAGAGGTCTTTGAA-TATAAAACTTATTTACATGAG
381 AAATAGTTTGCAATTTTGTA-AGCAATTGT--AGGTCTTTGAATTA-AAAACTTATTTACATGAA
* *
11864364 AATTGTTTCACTCTTTGTTCTTGGCCGA-ACTTTCAAACAT-GTCAAACTTTTAATAGT-TTTTT
442 AATTGTTTCACTCTTGGTTCTTGGCCGAGA-TTTCAAAC-TCGTCAAACTTTTAAGAGTATTTTT
** * *
11864426 ATAACTTTTTTTCCTAAAAGTATTGAAGATGATCCAT
505 ATAACTTTGATTCCTAAAAGTATTCAAGACGATCCAT
11864463 ACCTTCAAGC
Statistics
Matches: 457, Mismatches: 67, Indels: 34
0.82 0.12 0.06
Matches are distributed among these distances:
549 31 0.07
550 96 0.21
551 247 0.54
552 82 0.18
553 1 0.00
ACGTcount: A:0.27, C:0.17, G:0.14, T:0.42
Consensus pattern (551 bp):
ATTTACCTGAGAATTGTTTCTCTATTGGTTCTTGGCCCAACTTTTGAACAGGTCAAACTTTTATG
AGTTCGTTTATAACTTTAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTCTA
AACATTCAATGCTCGAGAAATCGCATCATTTGGTCAAAATAGTTTGTCATTTTGTAAACAATTTT
GTCTTTAAATTAAAAACTTATTTGCATGAGAATTGTTTCTCTCTTGGTTCTTAACCGATATTCCG
AACCTGTAAGAATTTTACGAGTTCTTTTATAAGTTTGGCTCCTTAAAGTATTCAAGACAATCCAT
TCCTTCAAGCAAATTTCCAAACATTCAATGCTCCAGAAATCACATCGTTTAGTCTAAATAGTTTG
CAATTTTGTAAGCAATTGTAGGTCTTTGAATTAAAAACTTATTTACATGAAAATTGTTTCACTCT
TGGTTCTTGGCCGAGATTTCAAACTCGTCAAACTTTTAAGAGTATTTTTATAACTTTGATTCCTA
AAAGTATTCAAGACGATCCATTCCGTTGAGC
Found at i:11864535 original size:216 final size:216
Alignment explanation
Indices: 11863922--11866593 Score: 2286
Period size: 215 Copynumber: 12.5 Consensus size: 216
11863912 TCCGTTGAGC
* * * * * ** *
11863922 ATTTACCTGAGAATTTTTTCTCTATTGGTTCTTGGCCCAACTTTTGAACAGGTCAAACTTTTATG
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAG
** ** * *
11863987 AGTTCTTTT-TAACTTAGGTTCCTTAAAGTATTCGGGACGATCCATTCTTTCGAGCAATTTTTCA
66 AGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCG
** * * *
11864051 AACATTTAATGCTCTAGATATCGCATCATTT-GTCAAAATAGTTTGTCATTTTGTAAACAACTTT
131 AACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTT
*
11864115 TTGTCTTTGAATTAAAAACTT
196 TGGTCTTTGAATTAAAAACTT
* * *
11864136 ATTT-CATGAGAATTGTTTTCTCTCTTTGGTTC-TGGCCGAACTTCCGAACCTGTCAAACTTTTA
1 ATTTACGTGAGAATTG-TTTCTCTC-TTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTA
* * * * * * *
11864199 CGAGTT-TTTTTTAAGCTTTTGCTCCTTAAAGTATTCTAGGCGGTCCATTCCTTCAAGCAA-TTT
64 AGAGTTCTTTTATAA-CTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTT
* * * * * * * *
11864262 TCTAAACATTCCATGCTTAGGAAATCGCATCGTTTGGTCTATATTGTTTGCCATTTTGTACAC-A
128 TC-GAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
*
11864326 CTTTAGAGGTCTTTGAA-TATAAAACTT
192 CTTT--TGGTCTTTGAATTA-AAAACTT
* * * * * *
11864353 ATTTACATGAGAATTGTTTCACTCTTTGTTCTTGGCCGAACTTTCAAACATGTCAAACTTTTAAT
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAG
* * * * * * *
11864418 AGTT-TTTTATAACTTTTTTTCCTAAAAGTATTGAAGATGATCCATACCTTCAAGCAATTTTTCA
66 AGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCG
* * * *
11864482 AACATTCCATGGTCAAGAAATGGCATCATTTGGTCTAAA-ATGGTTGTCATTTTGTGAAA-AACA
131 AACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATA-GTTTGTCATTTTGT-AAACAACT
* * *
11864545 TTTGATTTTTGAATT-AAAACCT
194 TTTGGTCTTTGAATTAAAAACTT
** * * ** *
11864567 ATTTACGTGAGAATAATATCTCTCTTGGATCTTGGTTGAACTTTCGAACTTTTCAAACTTTTACA
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTA-A
*
11864632 -AGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCC
65 GAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTC
* * * * * *
11864696 GAACATGCAATGCTCAAGAAATTGCAACTTTTGGTCTAAATAGCTTGTCATTTTGTAAACAACTT
130 GAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAC-T
* * *
11864761 TTTTGTCTTTAAATTAAAACCTT
194 TTTGGTCTTTGAATTAAAAACTT
* ** * * *
11864784 ATTTGCGTGAGAATTGTTTCTCTCTTGGTTCTTAACTGATA-TTTCAAATTTGTCAAAC-TTTAA
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGA-ACTTTCGAACTTGTCAAACTTTTAA
* * * *
11864847 GAGTTTTTTTTATAACTTTGGTTCCTT-AAGTATT-ATAGACTATCCATTCCTTCGAGAAATTTT
65 GAG-TTCTTTTATAACTTTTGTTCCTTAAAGTATTCA-AGACGATCCATTCCTTCGAGCAATTTT
* * * * * * *
11864910 TCGAACATTTCATGCTTAGGAAATTGGATC-TGTTGGTCTAAATAGTTTGTAATTTTGTAAAAAA
128 TCGAACATTCCATGCTCAAGAAATCGCATCAT-TTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* * * * *
11864974 GTTTTGGCCTCTAAATTAAAAATTT
192 CTTTTGGTCTTTGAATTAAAAACTT
* * *
11864999 ATTTATGTGAGAA-----------TTGG----T---CGAATTTTCGAACTTGTCAAACTTTTACG
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAG
*** * * * * *
11865046 AGTTC-TTTATAACTCCGGTTCCTTAAGGTATTCAAGACGATGCTTTCC-TCGAGAAATTTTTTG
66 AGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCG
* * * * * *
11865109 AACATTCAATGCT-AGAGATATAGCATCATTTGGACTAAATAGTTTGTCATTTTGTAAAAAAATT
131 AACATTCCATGCTCA-AGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTT
11865173 TTGGTCTTTGAATTAAAAACTT
195 TTGGTCTTTGAATTAAAAACTT
* * * * ** * *
11865195 ATTT-TGTGAGAATTGTTTCTCTCTTGGATCTTGTCCAAACTACCAAACCTT-TCAAACTTTTTA
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAA-CTTGTCAAACTTTTAA
* * * * ** * * * * *
11865258 CATGTTCTTCTATAAC-TTTGGTCCTTAATGTATTCAAGATAATCCGTTCCTTCAAGAAATTGTC
65 GA-GTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTT
* * * ** ** * *
11865322 CGAACATTTCATGTTCGAG-AATCTTATCAGGTGGTCAAAATAGTTTCTCATTTTGTAAACAACT
129 CGAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACT
11865386 TTTGGT-TTGTGAATTAAAAACTT
194 TTTGGTCTT-TGAATTAAAAACTT
* * * * *
11865409 ATTTACATGAGAATTTTTTCTCT-TATGGTTCCTGGGCGAACTTTCGAACTTGTCAAACTTTTAC
1 ATTTACGTGAGAATTGTTTCTCTCT-TGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAA
* *** * * * ** *
11865473 TAGTTC--TTATAACTTCAATTCCTTAAAGT-TTGAAGACAATCCATTCATTCGAGCAGCTTTCC
65 GAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTC
* * *** * * *
11865535 AAACATTCCATTCTTGGGAAATTGGATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAACTT
130 GAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTT
* *
11865600 TTGGTCTTTGAAATAAAACCTT
195 TTGGTCTTTGAATTAAAAACTT
* * * * *
11865622 ATTTACATGAGAATTGTTTCTCTCCTGGCTCTTGGTCGAAC-TTCGAACTTTTC-AACTTTTTAA
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAAC-TTTTAA
* * * *
11865685 AAGTTATTTTATAAC-TTAGTTTCCTTAAAGTATTCAAGACGATCCATTCTTTCGAGCAA-TTTT
65 GAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTT
* * * * * *
11865748 CTGAACATTCCATGATC-GGGAATCGCATAATTTGGTCTAAATAGTTTGTCTTTTTATAAA-AAG
129 C-GAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA-
* *
11865811 ATTTTGGTCTTTGAATT-AAAACGT
192 CTTTTGGTCTTTGAATTAAAAACTT
* ** * * *
11865835 ATTTTCGTGAGAATTGTTTCTCTCTTGGTT-TTGTTC-ATACATCCAAACTTGTCAAACTTTTAA
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGA-ACTTTCGAACTTGTCAAACTTTTAA
*
11865898 GAATTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGAGACGATCCATTCCTTCGAGCAA-TTT
65 GAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTC-A-AGACGATCCATTCCTTCGAGCAATTTT
** *** * * *
11865962 TCTGAACATTAAATGCAGGAGAAATTGTATCATTTGGTCTAAATAGTTTGCCATTTT-TCAAACA
128 TC-GAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGT-AAACA
* **
11866026 AGTTTTGCCCTTTGAATTAAAAACTT
191 ACTTTTGGTCTTTGAATTAAAAACTT
* * ** * * *
11866052 ATTTACGTGAGCATTGTTTATCTCTTCTTTCTTGGCCAAACTTTCGAACTTGTCCAACTTTTACG
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAG
** * * *
11866117 AGTTCTTTTATAACTTCAGTTCTTTAAAGCATTCAAGACGATCCATTTCATTCTTCGAG-AAATT
66 AGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCA-TTC---CTTCGAGCAATTT
* * ** *
11866181 TTCTAAACATTCCATTCTCGTGAAATCACATCATTTGGTCTAAATAGTTTGTCA-TTTGTAAACA
127 TTC-GAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACA
*
11866245 ACTTTTGTTCTTTGAATTAAAAACTT
191 ACTTTTGGTCTTTGAATTAAAAACTT
* * ** *
11866271 ATTTTA-GTGAGAATTTTTTTTCTCTTGGTTCTTGGTTGAAC-TTCTGAAGTTGTCAAACTTTTA
1 A-TTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTC-GAACTTGTCAAACTTTTA
* * * ** * * * * * *
11866334 CGAGTTCGTTTATAACCTTAATTCCTTAAAATATTGAAGATGATTCATTCTTTCGAGCAATTTTC
64 AGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTT
* * * ** *
11866399 CGAACATTCAATGCTCGAGATATTACATCATTTGGTCTAAATAGTTTGTCATTTTATAAACAACT
129 CGAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACT
* *
11866464 TTTTGTCTTTGAATAAAAAACTT
194 TTTGGTCTTTGAATTAAAAACTT
* * * * *
11866487 ATTTACATGAGAATTATTTCTCTCTTCGATCTTGGCCGAACTTTCGAACTTTTCAAACTTTTACA
1 ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTA-A
* **
11866552 -AGTTCTTTTATAAATTCAGTTCCTTAAAGTATTCAAGACGAT
65 GAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGAT
11866594 TCAGTCTTTG
Statistics
Matches: 1981, Mismatches: 381, Indels: 190
0.78 0.15 0.07
Matches are distributed among these distances:
195 9 0.00
196 105 0.05
197 37 0.02
198 8 0.00
200 1 0.00
204 4 0.00
206 4 0.00
210 1 0.00
211 4 0.00
212 69 0.03
213 210 0.11
214 294 0.15
215 414 0.21
216 389 0.20
217 188 0.09
218 72 0.04
219 115 0.06
220 57 0.03
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (216 bp):
ATTTACGTGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAG
AGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCG
AACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTT
TGGTCTTTGAATTAAAAACTT
Found at i:11864732 original size:431 final size:431
Alignment explanation
Indices: 11863922--11866593 Score: 2415
Period size: 431 Copynumber: 6.2 Consensus size: 431
11863912 TCCGTTGAGC
* * * * * **
11863922 ATTTACCTGAGAATTTTTTCTCTATTGGTTCTTGGCCCAACTTTTGAACAGGTCAAACTTTT-AT
1 ATTTACATGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAT
* ** *
11863986 GAGTTCTTTT-TAACTTAGGTTCCTTAAAGTATTCGGGACGATCCATTCTTTCGAGCAATTTTTC
66 -AGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTC
** * * *
11864050 AAACATTTAATGCTCTAGATATCGCATCATTT-GTCAAAATAGTTTGTCATTTTGTAAACAACTT
130 AAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTT
* * *
11864114 TTTGTCTTTGAATTAAAAACTTATTT-CATGAGAATTGTTTTCTCTCTTTGGTTC-TGGCCGAAC
195 TTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATT-TTTTCTCTC-TTGGTTCTTGGTCGAAC
* * * * * *
11864177 TTCCGAACCTGTCAAACTTTTACGAGTT-TTTTTTAAGCTTTTGCTCCTTAAAGTATTCTAGGCG
258 TTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAA-CTTTTGTTCCTTAAAGTATTCAAGACG
* * ** * * * * * *
11864241 GTCCATTCCTTCAAGCAATTTTCTAAACATTCCATGCTTAGGAAATCGCATCGTTTGGTCTATAT
322 ATCCATTCCTTCGAGCAATTTTCCGAACATTCAATGCTCAAGAAATTGCATCATTTGGTCTAAAT
* * * *
11864306 TGTTTGCCATTTTGTACAC-ACTTTAGAGGTCTTTGAATATAAAACTT
387 AGTTTGTCATTTTGTAAACAACTTT--TGGTCTTTGAAT-TAAAACTT
* * * *
11864353 ATTTACATGAGAATTGTTTCACTCTTTGTTCTTGGCCGAACTTTCAAACATGTCAAACTTTTAAT
1 ATTTACATGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAT
** * * * * *
11864418 AGTT-TTTTATAACTTTTTTTCCTAAAAGTATTGAAGATGATCCATACCTTCAAGCAATTTTTCA
66 AGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCA
* * * *
11864482 AACATTCCATGGTCAAGAAATGGCATCATTTGGTCTAAA-ATGGTTGTCATTTTGTGAAA-AACA
131 AACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATA-GTTTGTCATTTTGT-AAACAACT
* * * ** * * *
11864545 TTTGATTTTTGAATT-AAAACCTATTTACGTGAGAATAATATCTCTCTTGGATCTTGGTTGAACT
194 TTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTTTTTCTCTCTTGGTTCTTGGTCGAACT
* *
11864609 TTCGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGAT
259 TTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGAT
* * *
11864674 CCATTCCTTCGAGCAATTTTCCGAACATGCAATGCTCAAGAAATTGCAACTTTTGGTCTAAATAG
324 CCATTCCTTCGAGCAATTTTCCGAACATTCAATGCTCAAGAAATTGCATCATTTGGTCTAAATAG
* * *
11864739 CTTGTCATTTTGTAAACAACTTTTTTGTCTTTAAATTAAAACCTT
389 TTTGTCATTTTGTAAACAAC-TTTTGGTCTTTGAATTAAAA-CTT
* * ** * * *
11864784 ATTTGCGTGAGAATTGTTTCTCTCTTGGTTCTTAACTGATA-TTTCAAATTTGTCAAAC-TTTAA
1 ATTTACATGAGAATTGTTTCTCTCTTGGTTCTTGGCCGA-ACTTTCGAACTTGTCAAACTTTTAA
* * * *
11864847 GAGTTTTTTTTATAACTTTGGTTCCTT-AAGTATT-ATAGACTATCCATTCCTTCGAGAAATTTT
65 TAG-TTCTTTTATAACTTTGGTTCCTTAAAGTATTCA-AGACGATCCATTCCTTCGAGCAATTTT
* * * * * * * *
11864910 TCGAACATTTCATGCTTAGGAAATTGGATC-TGTTGGTCTAAATAGTTTGTAATTTTGTAAAAAA
128 TCAAACATTCCATGCTCAAGAAATCGCATCAT-TTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* * * * * *
11864974 GTTTTGGCCTCTAAATTAAAAATTTATTTATGTGAGAA------------------TTGGTCGAA
192 CTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTTTTTCTCTCTTGGTTCTTGGTCGAA
* *** *
11865021 TTTTCGAACTTGTCAAACTTTTACGAGTTC-TTTATAACTCCGGTTCCTTAAGGTATTCAAGACG
257 CTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACG
* * * ** * * *
11865085 ATGCTTTCC-TCGAGAAATTTTTTGAACATTCAATGCT-AGAGATATAGCATCATTTGGACTAAA
322 ATCCATTCCTTCGAGCAATTTTCCGAACATTCAATGCTCA-AGAAATTGCATCATTTGGTCTAAA
* *
11865148 TAGTTTGTCATTTTGTAAAAAAATTTTGGTCTTTGAATTAAAAACTT
386 TAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATT-AAAACTT
** * * * ** *
11865195 ATTT-TGTGAGAATTGTTTCTCTCTTGGATCTTGTCCAAACTACCAAACCTT-TCAAACTTTTTA
1 ATTTACATGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAA-CTTGTCAAAC-TTTTA
* * ** * * * *
11865258 CAT-GTTCTTCTATAACTTTGG-TCCTTAATGTATTCAAGATAATCCGTTCCTTCAAGAAATTGT
64 -ATAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTT
* * * * * ** ** * *
11865321 CCGAACATTTCATGTTCGAG-AATCTTATCAGGTGGTCAAAATAGTTTCTCATTTTGTAAACAAC
128 TCAAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAC
* * *
11865385 TTTTGGT-TTGTGAATTAAAAACTTATTTACATGAGAATTTTTTCTCT-TATGGTTCCTGGGCGA
193 TTTTGGTCTT-TGAATTAAAAACTTATTTACGTGAGAATTTTTTCTCTCT-TGGTTCTTGGTCGA
* *** *
11865448 ACTTTCGAACTTGTCAAACTTTTACTAGTTC--TTATAACTTCAATTCCTTAAAGT-TTGAAGAC
256 ACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGAC
* * ** * * * *** * *
11865510 AATCCATTCATTCGAGCAGCTTTCCAAACATTCCATTCTTGGGAAATTGGATCATTTGATCTAAA
321 GATCCATTCCTTCGAGCAATTTTCCGAACATTCAATGCTCAAGAAATTGCATCATTTGGTCTAAA
*
11865575 TAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAAATAAAACCTT
386 TAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAA-CTT
* * * *
11865622 ATTTACATGAGAATTGTTTCTCTCCTGGCTCTTGGTCGAAC-TTCGAACTTTTC-AACTTTTTAA
1 ATTTACATGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAAC-TTTTAA
* * * * *
11865685 AAGTTATTTTATAACTTAGTTTCCTTAAAGTATTCAAGACGATCCATTCTTTCGAGCAA-TTTTC
65 TAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTC
* * * * * * * *
11865749 TGAACATTCCATGATC-GGGAATCGCATAATTTGGTCTAAATAGTTTGTCTTTTTATAAA-AAGA
130 -AAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA-C
* * * *
11865812 TTTTGGTCTTTGAATT-AAAACGTATTTTCGTGAGAATTGTTTCTCTCTTGGTT-TTGTTC-ATA
193 TTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTTTTTCTCTCTTGGTTCTTGGTCGA-A
* * * * *
11865874 CATCCAAACTTGTCAAACTTTTAAGAATTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGAGA
257 CTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTC-A-AGA
* * *** *
11865939 CGATCCATTCCTTCGAGCAATTTTCTGAACATTAAATGCAGGAGAAATTGTATCATTTGGTCTAA
320 CGATCCATTCCTTCGAGCAATTTTCCGAACATTCAATGCTCAAGAAATTGCATCATTTGGTCTAA
* * **
11866004 ATAGTTTGCCATTTT-TCAAACAAGTTTTGCCCTTTGAATTAAAAACTT
385 ATAGTTTGTCATTTTGT-AAACAACTTTTGGTCTTTGAATT-AAAACTT
* * * ** * * **
11866052 ATTTACGTGAGCATTGTTTATCTCTTCTTTCTTGGCCAAACTTTCGAACTTGTCCAACTTTTACG
1 ATTTACATGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAT
** * * *
11866117 AGTTCTTTTATAACTTCAGTTCTTTAAAGCATTCAAGACGATCCATTTCATTCTTCGAG-AAATT
66 AGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCA-TTC---CTTCGAGCAATTT
* ** *
11866181 TTCTAAACATTCCATTCTCGTGAAATCACATCATTTGGTCTAAATAGTTTGTCA-TTTGTAAACA
127 TTC-AAACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACA
* * *
11866245 ACTTTTGTTCTTTGAATTAAAAACTTATTTTA-GTGAGAATTTTTTTTCTCTTGGTTCTTGGTTG
191 ACTTTTGGTCTTTGAATTAAAAACTTA-TTTACGTGAGAATTTTTTCTCTCTTGGTTCTTGGTCG
* * * ** * *
11866309 AAC-TTCTGAAGTTGTCAAACTTTTACGAGTTCGTTTATAACCTTAATTCCTTAAAATATTGAAG
255 AACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAG
* * * * * *
11866373 ATGATTCATTCTTTCGAGCAATTTTCCGAACATTCAATGCTCGAGATATTACATCATTTGGTCTA
319 ACGATCCATTCCTTCGAGCAATTTTCCGAACATTCAATGCTCAAGAAATTGCATCATTTGGTCTA
* * *
11866438 AATAGTTTGTCATTTTATAAACAACTTTTTGTCTTTGAATAAAAAACTT
384 AATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAAT-TAAAACTT
* * * *
11866487 ATTTACATGAGAATTATTTCTCTCTTCGATCTTGGCCGAACTTTCGAACTTTTCAAACTTTTACA
1 ATTTACATGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTA-A
* **
11866552 -AGTTCTTTTATAAATTCAGTTCCTTAAAGTATTCAAGACGAT
65 TAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGAT
11866594 TCAGTCTTTG
Statistics
Matches: 1809, Mismatches: 347, Indels: 166
0.78 0.15 0.07
Matches are distributed among these distances:
409 2 0.00
410 106 0.06
411 82 0.05
412 73 0.04
413 38 0.02
414 35 0.02
424 1 0.00
425 29 0.02
426 80 0.04
427 214 0.12
428 68 0.04
429 2 0.00
430 149 0.08
431 473 0.26
432 95 0.05
433 6 0.00
434 2 0.00
435 236 0.13
436 64 0.04
437 53 0.03
438 1 0.00
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (431 bp):
ATTTACATGAGAATTGTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACTTGTCAAACTTTTAAT
AGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCA
AACATTCCATGCTCAAGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTT
TGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTTTTTCTCTCTTGGTTCTTGGTCGAACTTT
CGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCC
ATTCCTTCGAGCAATTTTCCGAACATTCAATGCTCAAGAAATTGCATCATTTGGTCTAAATAGTT
TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAACTT
Found at i:11864880 original size:982 final size:985
Alignment explanation
Indices: 11862944--11864896 Score: 2425
Period size: 982 Copynumber: 2.0 Consensus size: 985
11862934 CTTATTTTCG
* * * *
11862944 TGAGAATTGTTTTTCTCTCTTGGTTCTTGGCCGAACTTTCGAACATGACGAACTTTAACGAGTTC
1 TGAGAATTGTTTTTCTCTATTGGTTCTTGGCCCAACTTTCGAACAGGACAAACTTTAACGAGTTC
* *
11863009 GTTTATAACATTAGTTCCTTAAAGTATTCAAGATGATCCATTCCTTTGAGCAATTTTTCGAACAT
66 GTTTATAACATTAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTTGAGCAATTTTTCAAACAT
*
11863074 TCAATGCTTGAGATAACGCATCATTTGGTCTAAATAATTTGTCATTTTGTAAACAACTTTTGGTC
131 TCAATGCTTGAGATAACGCATCATTTGGTCAAAATAATTTGTCATTTTGTAAACAACTTTTGGTC
* * *
11863139 TTTGAATAAAAAACTTATTTACGTAAGAATTATTCCTCTCTTGGATCTTGGTCGAACATCCTAAC
196 TTTGAATAAAAAACTTATTTACATAAGAATTATTCCTCTCTTGGATCTTGGCCGAACATCCGAAC
* * *
11863204 TTTTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCATGGCGATCCATTCC
261 CTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGCTCCTTAAAGTATTCATGGCGATCCATTCC
* * *
11863269 TTAGAGCAATTTTCTAAACATTTCATGTTCGACAAATCGCATCAGTTGGTCTAAATAGTTTGTCA
326 TTAGAGCAATTTTCTAAACATTCCATGTTAGACAAATCGCATCAGTTGGTCTAAATAGTTTGCCA
** * *
11863334 TTTTGTAAACAAGTATTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATTGTTTCTCTTTTGG
391 TTTTGTAAACAAGTAGAGGTCTTTGAATTAAAAACTTATTTACATGAGAATTGTTTCACTTTTGG
* ** * * *
11863399 TTCTTGGCTGAACTTTTGAACTTGTCTAACTTTTATGAGTTCGTTTATAACTTTAGTTCCTTAAA
456 TTCTTGGCCGAACTTTCAAACATGTCAAACTTTTATGAGTTCGTTTATAACTTTAGTTCCTAAAA
* * *
11863464 GTATTCAAGATGATCCATTCCTTCAAGCAATTTTCTAAACATTCAATGCTCGAGAAATCGCATCT
521 GTATTCAAGATGATCCATACCTTCAAGCAATTTTCTAAACATTCAATGCTCAAGAAATCGCATCA
* * * *
11863529 TTTGGTCTAAATAGTTTGTCATTTTGTAAATAATTTTGTCTTTAAATTAAAAACTTATTTGCATG
586 TTTGGTCTAAATAGGTTGTCATTTTGTAAATAAATTTGTCTTTAAATTAAAAACCTATTTACATG
** * * *
11863594 AGAATTGTTTCTCTCTTGGTTCTTAACCGATATTTCGAACTTGTAAGAATTTTACGAGTTCTTTT
651 AGAATAATATCTCTCTTGGATCTTAACCGATATTTCGAACTTGTAAGAATTTTACAAGTTCTTTT
* * * * *
11863659 ATAAGTTTGGTTCCTTAAAGTGTTGAAGACAATCCATTCCTTCTAGCAAATTTCCGAACATTCAA
716 ATAACTTTGGTTCCTTAAAGTATTCAAGACAATCCATTCCTTCGAGCAAATTTCCGAACATGCAA
* * * * * *
11863724 TGCTCCAGAAATCACATCTTTTAGTCTAAATAGTTTGTAATTTTGTAAGCAATTGTTGGTGTTTG
781 TGCTCAAGAAATCACAACTTTTAGTCTAAATAGCTTGTAATTTTGTAAACAATTGTTGGTCTTTA
*** **
11863789 AATTAAAAACTTATTTACGTGAAAATTGTTTCTCTCTTGGTTTTTTGTCGAGATTTTGAACTCGT
846 AATTAAAAACTTATTTACGTGAAAATTGTTTCTCTCTTGGTTTTAACTCGAGATTTCAAACTCGT
*
11863854 CAAACTTTTACGAGTATTTTTATAATTTCGATTCCTTAAAGTATTCA-AGACGATCCATTCCGTT
911 CAAACTTTTAAGAGTATTTTTATAATTTCGATTCCTTAAAGTATT-ATAGACGATCCATTCCGTT
11863918 GAGCATTTACC
975 GAGCATTTACC
* * * *
11863929 TGAGAA-T-TTTTTCTCTATTGGTTCTTGGCCCAACTTTTGAACAGGTCAAACTTTTATGAGTTC
1 TGAGAATTGTTTTTCTCTATTGGTTCTTGGCCCAACTTTCGAACAGGACAAACTTTAACGAGTTC
* **
11863992 -TTTTTAAC-TTAGGTTCCTTAAAGTATTCGGGACGATCCATT-CTTTCGAGCAATTTTTCAAAC
66 GTTTATAACATTA-GTTCCTTAAAGTATTCAAGACGATCCATTCCTTT-GAGCAATTTTTCAAAC
* * * *
11864054 ATTTAATGCTCT-AGATATCGCATCATTT-GTCAAAATAGTTTGTCATTTTGTAAACAACTTTTT
129 ATTCAATGCT-TGAGATAACGCATCATTTGGTCAAAATAATTTGTCATTTTGTAAACAACTTTTG
* * * * * *
11864117 GTCTTTGAATTAAAAACTTATTT-CATGAGAATTGTTTTCTCTCTTTGGTTC-TGGCCGAACTTC
193 GTCTTTGAATAAAAAACTTATTTACATAAGAATT-ATTCCTCTC-TTGGATCTTGGCCGAACATC
* ** *
11864180 CGAACCTGTCAAACTTTTACGAGTT-TTTTTTAAGCTTTTGCTCCTTAAAGTATTC-TAGGCGGT
256 CGAACCTGTCAAACTTTTACGAGTTCTTTTATAA-CTTCGGCTCCTTAAAGTATTCAT-GGCGAT
* *
11864243 CCATTCCTTCA-AGCAATTTTCTAAACATTCCATGCTTAG-GAAATCGCATC-GTTTGGTCTATA
319 CCATTCCTT-AGAGCAATTTTCTAAACATTCCATG-TTAGACAAATCGCATCAG-TTGGTCTAAA
* * **
11864305 TTGTTTGCCATTTTGTACACACTTTAGAGGTCTTTGAA-TATAAAACTTATTTACATGAGAATTG
381 TAGTTTGCCATTTTGTAAACA-AGTAGAGGTCTTTGAATTA-AAAACTTATTTACATGAGAATTG
*
11864369 TTTCACTCTTT-GTTCTTGGCCGAACTTTCAAACATGTCAAACTTTTAAT-AGTT-TTTTATAAC
444 TTTCACT-TTTGGTTCTTGGCCGAACTTTCAAACATGTCAAACTTTT-ATGAGTTCGTTTATAAC
** * * *
11864431 TTTTTTTCCTAAAAGTATTGAAGATGATCCATACCTTCAAGCAATTTT-TCAAACATTCCATGGT
507 TTTAGTTCCTAAAAGTATTCAAGATGATCCATACCTTCAAGCAATTTTCT-AAACATTCAATGCT
* * *
11864495 CAAGAAATGGCATCATTTGGTCTAAA-ATGGTTGTCATTTTGTGAAA-AACATTTGATTTTTGAA
571 CAAGAAATCGCATCATTTGGTCTAAATA-GGTTGTCATTTTGT-AAATAA-ATTTG-TCTTTAAA
* **** *
11864558 TT-AAAACCTATTTACGTGAGAATAATATCTCTCTTGGATCTTGGTTGA-ACTTTCGAACTTTTC
632 TTAAAAACCTATTTACATGAGAATAATATCTCTCTTGGATCTTAACCGATA-TTTCGAACTTGT-
* * *
11864621 AA-ACTTTTACAAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
695 AAGAATTTTACAAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACAATCCATTCCTTCG
* ** * *
11864685 AGCAATTTTCCGAACATGCAATGCTCAAGAAATTGCAACTTTTGGTCTAAATAGCTTGTCATTTT
760 AGCAAATTTCCGAACATGCAATGCTCAAGAAATCACAACTTTTAGTCTAAATAGCTTGTAATTTT
* * * * *
11864750 GTAAACAACTTTTTTGTCTTTAAATTAAAACCTTATTTGCGTGAGAATTGTTTCTCTCTTGGTTC
825 GTAAACAA-TTGTTGGTCTTTAAATTAAAAACTTATTTACGTGAAAATTGTTTCTCTCTTGGTT-
* * * * *
11864815 TTAACT-GATATTTCAAATTTGTCAAAC-TTTAAGAGTTTTTTTTATAACTTT-GGTTCCTT-AA
888 TTAACTCGAGATTTCAAACTCGTCAAACTTTTAAGAG-TATTTTTATAA-TTTCGATTCCTTAAA
*
11864876 GTATTATAGACTATCCATTCC
951 GTATTATAGACGATCCATTCC
11864897 TTCGAGAAAT
Statistics
Matches: 826, Mismatches: 116, Indels: 55
0.83 0.12 0.06
Matches are distributed among these distances:
980 19 0.02
981 296 0.36
982 353 0.43
983 145 0.18
984 7 0.01
985 6 0.01
ACGTcount: A:0.28, C:0.17, G:0.14, T:0.41
Consensus pattern (985 bp):
TGAGAATTGTTTTTCTCTATTGGTTCTTGGCCCAACTTTCGAACAGGACAAACTTTAACGAGTTC
GTTTATAACATTAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTTGAGCAATTTTTCAAACAT
TCAATGCTTGAGATAACGCATCATTTGGTCAAAATAATTTGTCATTTTGTAAACAACTTTTGGTC
TTTGAATAAAAAACTTATTTACATAAGAATTATTCCTCTCTTGGATCTTGGCCGAACATCCGAAC
CTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGCTCCTTAAAGTATTCATGGCGATCCATTCC
TTAGAGCAATTTTCTAAACATTCCATGTTAGACAAATCGCATCAGTTGGTCTAAATAGTTTGCCA
TTTTGTAAACAAGTAGAGGTCTTTGAATTAAAAACTTATTTACATGAGAATTGTTTCACTTTTGG
TTCTTGGCCGAACTTTCAAACATGTCAAACTTTTATGAGTTCGTTTATAACTTTAGTTCCTAAAA
GTATTCAAGATGATCCATACCTTCAAGCAATTTTCTAAACATTCAATGCTCAAGAAATCGCATCA
TTTGGTCTAAATAGGTTGTCATTTTGTAAATAAATTTGTCTTTAAATTAAAAACCTATTTACATG
AGAATAATATCTCTCTTGGATCTTAACCGATATTTCGAACTTGTAAGAATTTTACAAGTTCTTTT
ATAACTTTGGTTCCTTAAAGTATTCAAGACAATCCATTCCTTCGAGCAAATTTCCGAACATGCAA
TGCTCAAGAAATCACAACTTTTAGTCTAAATAGCTTGTAATTTTGTAAACAATTGTTGGTCTTTA
AATTAAAAACTTATTTACGTGAAAATTGTTTCTCTCTTGGTTTTAACTCGAGATTTCAAACTCGT
CAAACTTTTAAGAGTATTTTTATAATTTCGATTCCTTAAAGTATTATAGACGATCCATTCCGTTG
AGCATTTACC
Found at i:11865189 original size:196 final size:195
Alignment explanation
Indices: 11864833--11865209 Score: 478
Period size: 196 Copynumber: 1.9 Consensus size: 195
11864823 TATTTCAAAT
* ** *
11864833 TTGTCAAACTTTAAGAGTTTTTTTTATAACTTTGGTTCCTTAAGTATTATAGACTATCCATTCCT
1 TTGTCAAACTTTAAGAG-TTTCTTTATAACTCCGGTTCCTTAAGTATTATAGACGATCCATTCCT
* * *
11864898 TCGAGAAATTTTTCGAACATTTCATGCTTAGGAAATTGGATCTGTTGGTCTAAATAGTTTGTAAT
65 TCGAGAAATTTTTCGAACATTTCATGCTTAGGAAATAGCATCTGTTGGACTAAATAGTTTGTAAT
* *
11864963 TTTGTAAAAAAGTTTTGGCCTCTAAATTAAAAATTTATTTATGTGAGAATTGGTCGAATTTTCGA
130 TTTGTAAAAAAATTTTGGCCTCTAAATTAAAAACTTATTT-TGTGAGAATTGGTCGAATTTTCGA
11865028 AC
194 AC
* * *
11865030 TTGTCAAACTTTTACGAG-TTCTTTATAACTCCGGTTCCTTAAGGTATTCA-AGACGATGCTTTC
1 TTGTCAAAC-TTTAAGAGTTTCTTTATAACTCCGGTTCCTTAA-GTATT-ATAGACGATCCATTC
* *
11865093 C-TCGAGAAATTTTTTGAACA-TTCAATGC-TAGAGATATAGCATCAT-TTGGACTAAATAGTTT
63 CTTCGAGAAATTTTTCGAACATTTC-ATGCTTAG-GAAATAGCATC-TGTTGGACTAAATAGTTT
* * * *
11865154 GTCATTTTGTAAAAAAATTTTGGTCTTTGAATTAAAAACTTATTTTGTGAGAATTG
125 GTAATTTTGTAAAAAAATTTTGGCCTCTAAATTAAAAACTTATTTTGTGAGAATTG
11865210 TTTCTCTCTT
Statistics
Matches: 156, Mismatches: 18, Indels: 14
0.83 0.10 0.07
Matches are distributed among these distances:
195 17 0.11
196 105 0.67
197 26 0.17
198 8 0.05
ACGTcount: A:0.30, C:0.12, G:0.16, T:0.41
Consensus pattern (195 bp):
TTGTCAAACTTTAAGAGTTTCTTTATAACTCCGGTTCCTTAAGTATTATAGACGATCCATTCCTT
CGAGAAATTTTTCGAACATTTCATGCTTAGGAAATAGCATCTGTTGGACTAAATAGTTTGTAATT
TTGTAAAAAAATTTTGGCCTCTAAATTAAAAACTTATTTTGTGAGAATTGGTCGAATTTTCGAAC
Found at i:11866406 original size:435 final size:426
Alignment explanation
Indices: 11865026--11866593 Score: 1596
Period size: 435 Copynumber: 3.6 Consensus size: 426
11865016 TCGAATTTTC
*** * * * *
11865026 GAACTTGTCAAACTTTTACGAGTTCTTTATAACTCCGGTTCCTTAAGGTATTCAAGACGATGCTT
1 GAACTTGTCAAACTTTTACGAGTTCTTTATAACT-TAATTCCTTAAAGTATTGAAGACGATCCAT
* * ** * * *
11865091 TCCTCGAGAAATTTTTTGAACATTCAATGCTA-GAGATATAGCATCATTTGGACTAAATAGTTTG
65 TCTTCGAGCAATTTTCCGAACATTCAATGCTAGGAGAAATTGCATCATTTGGTCTAAATAGTTTG
* **
11865155 TCATTTTGTAAAAAAATTTTGGTCTTTGAATTAAAAACTTATTT-TGTGAGAATTGTTTCTCTCT
130 TCATTTTGTAAACAAATTTTGGTCTTTGAATTAAAAACTTATTTACATGAGAATTGTTTCTCTCT
* * ** * * * * *
11865219 TGGATCTTGTCCAAACTACCAAACCTTTCAAACTTTTTACATGTTCTTCTATAACTTTGGTCCTT
195 TCGATCTTGGCCAAACTTTCGAA-CTTTCAAACTTTTTACAAGTTCTTTTATAACTTAGTTCCTT
* ** * * * * * **
11865284 AATGTATTCAAGATAATCCGTTC-CTTCAAGAAATTGTCCGAACATTTCATGTTCGAGAATCTTA
259 AAAGTATTCAAGACGATCCATTCTCTTCGAGAAATTTTCTGAACATTCCAT-TTCG-GAATCACA
** * * *
11865348 TCAGGTGGTCAAAATAGTTTCTCATTTTGTAAACAACTTTTGGTT-TGTGAATTAAAAACTTA-T
322 TCATTTGGTCTAAATAGTTTGTCA-TTTGTAAACAACTTTT-GTTCTTTGAATTAAAAACTTATT
* * **
11865411 TTACATGAGAATTTTTTCTCT-TATGGTTCCTGGGCGAACTT-T
385 TTA-GTGAGAATTTTTTCTCTCT-TGGTTCTTGGTTGAACTTCT
* *
11865453 CGAACTTGTCAAACTTTTACTAGTTC-TTATAACTTCAATTCCTTAAAGT-TTGAAGACAATCCA
1 -GAACTTGTCAAACTTTTACGAGTTCTTTATAACTT-AATTCCTTAAAGTATTGAAGACGATCCA
** * * * * * *
11865516 TTCATTCGAGCAGCTTTCCAAACATTCCATTCTTGG-GAAATTGGATCATTTGATCTAAATAGTT
64 TTC-TTCGAGCAATTTTCCGAACATTCAATGCTAGGAGAAATTGCATCATTTGGTCTAAATAGTT
* * *
11865580 TGTCATTTTGTAAACAACTTTTGGTCTTTGAAATAAAACCTTATTTACATGAGAATTGTTTCTCT
128 TGTCATTTTGTAAACAAATTTTGGTCTTTGAATTAAAAACTTATTTACATGAGAATTGTTTCTCT
* * * * * * *
11865645 CCTGGCTCTTGGTCGAAC-TTCGAACTTTTC-AACTTTTTAAAAGTTATTTTATAACTTAGTTTC
193 CTTCGATCTTGGCCAAACTTTCGAAC-TTTCAAACTTTTTACAAGTTCTTTTATAACTTAG-TTC
* *
11865708 CTTAAAGTATTCAAGACGATCCATTCT-TTCGAGCAATTTTCTGAACATTCCATGATCGGGAATC
256 CTTAAAGTATTCAAGACGATCCATTCTCTTCGAGAAATTTTCTGAACATTCCAT-TTC-GGAATC
* * * * * * *
11865772 GCATAATTTGGTCTAAATAGTTTGTC-TTTTTATAAAAAGATTTTGGTCTTTGAATT-AAAACGT
319 ACATCATTTGGTCTAAATAGTTTGTCATTTGTA-AACAA-CTTTTGTTCTTTGAATTAAAAACTT
* * * * *
11865835 ATTTTCGTGAGAATTGTTTCTCTCTTGGTT-TT-GTTCATACATCC
382 ATTTTAGTGAGAATTTTTTCTCTCTTGGTTCTTGGTTGA-ACTTCT
* * * ** *
11865879 AAACTTGTCAAACTTTTAAGAATTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGAGACGATC
1 GAACTTGTCAAACTTTTACGAGTTC-TTTATAAC-TTAATTCCTTAAAGTATT-GA-AGACGATC
* * *
11865944 CATTCCTTCGAGCAATTTTCTGAACATTAAATGC-AGGAGAAATTGTATCATTTGGTCTAAATAG
62 CATT-CTTCGAGCAATTTTCCGAACATTCAATGCTAGGAGAAATTGCATCATTTGGTCTAAATAG
* * ** * * *
11866008 TTTGCCATTTT-TCAAACAAGTTTTGCCCTTTGAATTAAAAACTTATTTACGTGAGCATTGTTTA
126 TTTGTCATTTTGT-AAACAAATTTTGGTCTTTGAATTAAAAACTTATTTACATGAGAATTGTTTC
** * *
11866072 TCTCTTCTTTCTTGGCCAAACTTTCGAACTTGTCCAAC-TTTTACGAGTTCTTTTATAACTTCAG
190 TCTCTTCGATCTTGGCCAAACTTTCGAACTT-TCAAACTTTTTACAAGTTCTTTTATAACTT-AG
* * *
11866136 TTCTTTAAAGCATTCAAGACGATCCATTTCATTCTTCGAGAAATTTTCTAAACATTCCATTCTCG
253 TTCCTTAAAGTATTCAAGACGATCCA-TTC--TCTTCGAGAAATTTTCTGAACATTCCATT-TCG
11866201 TGAAATCACATCATTTGGTCTAAATAGTTTGTCATTTGTAAACAACTTTTGTTCTTTGAATTAAA
314 -G-AATCACATCATTTGGTCTAAATAGTTTGTCATTTGTAAACAACTTTTGTTCTTTGAATTAAA
*
11866266 AACTTATTTTAGTGAGAATTTTTTTTCTCTTGGTTCTTGGTTGAACTTCT
377 AACTTATTTTAGTGAGAATTTTTTCTCTCTTGGTTCTTGGTTGAACTTCT
* * * *
11866316 GAAGTTGTCAAACTTTTACGAGTTCGTTTATAACCTTAATTCCTTAAAATATTGAAGATGATTCA
1 GAACTTGTCAAACTTTTACGAGTTC-TTTATAA-CTTAATTCCTTAAAGTATTGAAGACGATCCA
* * *
11866381 TTCTTTCGAGCAATTTTCCGAACATTCAATGCT-CGAGATATTACATCATTTGGTCTAAATAGTT
64 TTC-TTCGAGCAATTTTCCGAACATTCAATGCTAGGAGAAATTGCATCATTTGGTCTAAATAGTT
* * * * *
11866445 TGTCATTTTATAAACAACTTTTTGTCTTTGAATAAAAAACTTATTTACATGAGAATTATTTCTCT
128 TGTCATTTTGTAAACAAATTTTGGTCTTTGAATTAAAAACTTATTTACATGAGAATTGTTTCTCT
* *
11866510 CTTCGATCTTGGCCGAACTTTCGAACTTTTCAAAC-TTTTACAAGTTCTTTTATAAATTCAGTTC
193 CTTCGATCTTGGCCAAACTTTCGAAC-TTTCAAACTTTTTACAAGTTCTTTTATAACTT-AGTTC
11866574 CTTAAAGTATTCAAGACGAT
256 CTTAAAGTATTCAAGACGAT
11866594 TCAGTCTTTG
Statistics
Matches: 931, Mismatches: 165, Indels: 81
0.79 0.14 0.07
Matches are distributed among these distances:
424 2 0.00
425 30 0.03
426 71 0.08
427 215 0.23
428 59 0.06
429 4 0.00
430 126 0.14
431 54 0.06
432 8 0.01
434 3 0.00
435 231 0.25
436 69 0.07
437 54 0.06
438 5 0.01
ACGTcount: A:0.29, C:0.17, G:0.13, T:0.41
Consensus pattern (426 bp):
GAACTTGTCAAACTTTTACGAGTTCTTTATAACTTAATTCCTTAAAGTATTGAAGACGATCCATT
CTTCGAGCAATTTTCCGAACATTCAATGCTAGGAGAAATTGCATCATTTGGTCTAAATAGTTTGT
CATTTTGTAAACAAATTTTGGTCTTTGAATTAAAAACTTATTTACATGAGAATTGTTTCTCTCTT
CGATCTTGGCCAAACTTTCGAACTTTCAAACTTTTTACAAGTTCTTTTATAACTTAGTTCCTTAA
AGTATTCAAGACGATCCATTCTCTTCGAGAAATTTTCTGAACATTCCATTTCGGAATCACATCAT
TTGGTCTAAATAGTTTGTCATTTGTAAACAACTTTTGTTCTTTGAATTAAAAACTTATTTTAGTG
AGAATTTTTTCTCTCTTGGTTCTTGGTTGAACTTCT
Found at i:11866673 original size:128 final size:129
Alignment explanation
Indices: 11866468--11866715 Score: 329
Period size: 128 Copynumber: 1.9 Consensus size: 129
11866458 ACAACTTTTT
* *
11866468 GTCTTTGAATAAAAAACTTATTTACATGAGAATTATTTCTCTCTTCGATCTTGGCCGAACTTTCG
1 GTCTTTGAATAAAAAACTTAATTACATGAGAATTATTTCTCTCTTCGATCTTGGCCAAACTTTCG
* * *
11866533 AACTTTTCAAACTTTTACAAGTTCT-TTTATAAATTCAGTTCCTTAAAGTATTCAAGACGATTCA
66 AACTTGTAAAACTTTTACAAGTT-TGATTATAAATTCAGTTCCTTAAAGTATTCAAGACGATTCA
* * * * ***
11866597 GTCTTTGAATTAAAAACTTAATTACGTGAGAATT-TTTCTCTCTTGGTTCTTTTTCAAACTTTCG
1 GTCTTTGAATAAAAAACTTAATTACATGAGAATTATTTCTCTCTTCGATCTTGGCCAAACTTTCG
** * *
11866661 AACTTGTAAAACTTTTATGAGTTTGATTATAACTTTAGTTCCTTAAAGTATTCAA
66 AACTTGTAAAACTTTTACAAGTTTGATTATAAATTCAGTTCCTTAAAGTATTCAA
11866716 AATGATCCAT
Statistics
Matches: 102, Mismatches: 16, Indels: 3
0.84 0.13 0.02
Matches are distributed among these distances:
127 1 0.01
128 70 0.69
129 31 0.30
ACGTcount: A:0.30, C:0.16, G:0.11, T:0.43
Consensus pattern (129 bp):
GTCTTTGAATAAAAAACTTAATTACATGAGAATTATTTCTCTCTTCGATCTTGGCCAAACTTTCG
AACTTGTAAAACTTTTACAAGTTTGATTATAAATTCAGTTCCTTAAAGTATTCAAGACGATTCA
Found at i:11867359 original size:216 final size:215
Alignment explanation
Indices: 11866597--11868315 Score: 1697
Period size: 216 Copynumber: 8.0 Consensus size: 215
11866587 AGACGATTCA
* * * * * *
11866597 GTCTTTGAATTAAAAACTTAATTACGTGAGAATT-TTTCTCTCTTGGTTCTTTTTCAAACTTTCG
1 GTCTTTGAATTAAAAACTTATTTACGTGAGAATTATTTCTCTCTTGGATCTTGTCCGAACTTCCG
* ** * * * * *
11866661 AACTTGTAAAACTTTTATGAGTT-TGATTATAACTTTAGTTCCTTAAAGTATTCAAAATGATCCA
66 AACTT-TCAAACTTTTACAAGTTCT-TTTATAACTTCAGTTCCTTAAAGTATTCAAGACGATCTA
* * * * * * * * *
11866725 TTCCTTCGAGCAATTTT-TCGAACCTTCAATGCTCGAGATATCACATTATTTGTTCTAAACA-AT
129 TTCCTTCAAGCAATTTTCT-GAACATTCCATGCTCGGGAAATCACATCATTTGGTCTAAATAGTT
*
11866788 T-TCATTTTATAAACAACTTTTG
193 TGTCATTTTGTAAACAACTTTTG
* * * * *
11866810 TTCTTTGGAA-AAAAAACTTATTTACATGAGAATTATTTTTCTCTTGGATCTATGT-CGAACTTT
1 GTCTTT-GAATTAAAAACTTATTTACGTGAGAATTATTTCTCTCTTGGATCT-TGTCCGAACTTC
* * ** * * *
11866873 CGAACATTCAAACTTTTACAAATTCTTTTATAACTTTGGTTCCTTACAGTATTCATGATGAT-TC
64 CGAACTTTCAAACTTTTACAAGTTCTTTTATAACTTCAGTTCCTTAAAGTATTCAAGACGATCT-
* * * * * * * *
11866937 ACTCTTTCGAGCAATTTTTTGAACATTCCATGCTAGGGAAATCGCATTATTTGGTTTAAATAGTT
128 ATTCCTTCAAGCAATTTTCTGAACATTCCATGCTCGGGAAATCACATCATTTGGTCTAAATAGTT
*
11867002 TATCATTTTGTAAACAACTTTTG
193 TGTCATTTTGTAAACAACTTTTG
* * * *
11867025 GTCTTTAAATT-AAAACTTATTTACGTGAGAATTGTTTGTCCCTT-GATTCTTGGT-CGAACTTC
1 GTCTTTGAATTAAAAACTTATTTACGTGAGAATTATTTCTCTCTTGGA-TCTT-GTCCGAACTTC
* *
11867087 CGAACTTCTCAAACTTTTACAAGTTCTTTTATAACTTAAGTTACTTAACA-TATTCAAGACGATC
64 CGAACTT-TCAAACTTTTACAAGTTCTTTTATAACTTCAGTTCCTTAA-AGTATTCAAGACGATC
* * * ** *
11867151 TATTCCTTTAAGCAATTTTCAGAACATTCAATGCTCAAGATATCACATCATTTGGTCTAAATAGT
127 TATTCCTTCAAGCAATTTTCTGAACATTCCATGCTCGGGAAATCACATCATTTGGTCTAAATAGT
*
11867216 TTGTCATTTTATAAACAACTTTTG
192 TTGTCATTTTGTAAACAACTTTTG
* * * * * *
11867240 GTTTTTGAATTAAAAACTTATTTTCGTGAGAATTGTTTCTCTCTTCGATCTTATCCGAACTTCCA
1 GTCTTTGAATTAAAAACTTATTTACGTGAGAATTATTTCTCTCTTGGATCTTGTCCGAACTTCCG
* * *
11867305 AACCTTTCAAACTTTTACATGTTCTTTTATAACTTCAATTCCTTAAAGTATTCAAGACGATCCAT
66 AA-CTTTCAAACTTTTACAAGTTCTTTTATAACTTCAGTTCCTTAAAGTATTCAAGACGATCTAT
* * * * *
11867370 TCCTTTTAA-CAAATTTTGTGAACATTTCATGCTCGGGAAATCACATCAGTTGGTTTAAATAGTT
130 TCC-TTCAAGC-AATTTTCTGAACATTCCATGCTCGGGAAATCACATCATTTGGTCTAAATAGTT
11867434 TGTCATTTTGTAAACAACTTTTG
193 TGTCATTTTGTAAACAACTTTTG
* * * * * *
11867457 GTCTTTGAATTAAAAAATTAGTTACGTGAGAATTATTACTCTCCTGGTTCCTAG-CCGAAC-TCT
1 GTCTTTGAATTAAAAACTTATTTACGTGAGAATTATTTCTCTCTTGGAT-CTTGTCCGAACTTC-
* * * * * * *
11867520 CGAACTTTTCAAACTTGTACTAGTTC-TTTATAACTTCGGTTCCATCAAGTATTCAAGACAATCC
64 CGAAC-TTTCAAACTTTTACAAGTTCTTTTATAACTTCAGTTCCTTAAAGTATTCAAGACGATCT
* * * * * *
11867584 ATTCCTTCAAGTAATTTTTTGAACATTCCATGCTCAGGAAATCGCATTATTTGGTCTAGATAGTT
128 ATTCCTTCAAGCAATTTTCTGAACATTCCATGCTCGGGAAATCACATCATTTGGTCTAAATAGTT
*
11867649 TTTCATTTTGTAAACAACTTTTG
193 TGTCATTTTGTAAACAACTTTTG
* * * * *
11867672 GTCTTTGAATTAAAAAACTTATTTATGTGAGAA-TAGTTTGTCTATTGGATATTGGCCGAACTTC
1 GTCTTTGAATT-AAAAACTTATTTACGTGAGAATTA-TTTCTCTCTTGGATCTTGTCCGAACTTC
* * * * *
11867736 CGAACTATCCAAACTTTTACAAGGTCTTTTATAACTTC-GATTTCTTATAGTATTCAAGATGATC
64 CGAACT-TTCAAACTTTTACAAGTTCTTTTATAACTTCAG-TTCCTTAAAGTATTCAAGACGAT-
* * * * * * * * * *
11867800 CT-TTCTTTCGAGCACTTTTCCGAACATTCTATGCTCGAGATATCGA-TTCATTTAGTGTAAATA
126 CTATTCCTTCAAGCAATTTTCTGAACATTCCATGCTCGGGAAATC-ACATCATTTGGTCTAAATA
*
11867863 GTTTGTCATTTTGTAAAGAACTTTTG
190 GTTTGTCATTTTGTAAACAACTTTTG
* ** * * * * *
11867889 GCCTTTGAAGAAAAAACTTAATGACGTGAGAATTATTTCTCTCTTCGATCTTGGCCGAACTTCTG
1 GTCTTTGAATTAAAAACTTATTTACGTGAGAATTATTTCTCTCTTGGATCTTGTCCGAACTTCCG
**
11867954 AACTTTTCAAACTTTTACAAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGAT-TCA
66 AAC-TTTCAAACTTTTACAAGTTCTTTTATAACTTCAGTTCCTTAAAGTATTCAAGACGATCT-A
* ** * * * *
11868018 CTCCTTCAAGCAATTTTCCAAACATTCCATTCTCGGGAAACCGCATGATTTGGTCTAAATAGTTT
129 TTCCTTCAAGCAATTTTCTGAACATTCCATGCTCGGGAAATCACATCATTTGGTCTAAATAGTTT
*
11868083 GTCATTTTGTAAACAACTTTAG
194 GTCATTTTGTAAACAACTTTTG
* * * * * *
11868105 GTCTTCGAATAAAAAAGTTATTTACGTGAGAATTATTTCTCTCTTTCGATCTTGTCCAAACTTTC
1 GTCTTTGAATTAAAAACTTATTTACGTGAGAATTATTTCTCTC-TTGGATCTTGTCCGAACTTCC
* * *
11868170 AAACTTTTCAAACTTTTACAAGTGT-TTTTATAACTTCAGTTACTTAAAGTATTCAAGATGAT-T
65 GAAC-TTTCAAACTTTTACAAGT-TCTTTTATAACTTCAGTTCCTTAAAGTATTCAAGACGATCT
* * *
11868233 CACTCCTTCGAGCAATTTT-TCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG
128 -ATTCCTTCAAGCAATTTTCT-GAACATTCCATGCTCGGGAAATCACATCATTTGGTCTAAATAG
*
11868297 TTTG-CTATTTTCTAAACAA
191 TTTGTC-ATTTTGTAAACAA
11868316 GTTATAAAAG
Statistics
Matches: 1250, Mismatches: 212, Indels: 84
0.81 0.14 0.05
Matches are distributed among these distances:
213 122 0.10
214 84 0.07
215 243 0.19
216 399 0.32
217 398 0.32
218 4 0.00
ACGTcount: A:0.29, C:0.18, G:0.13, T:0.41
Consensus pattern (215 bp):
GTCTTTGAATTAAAAACTTATTTACGTGAGAATTATTTCTCTCTTGGATCTTGTCCGAACTTCCG
AACTTTCAAACTTTTACAAGTTCTTTTATAACTTCAGTTCCTTAAAGTATTCAAGACGATCTATT
CCTTCAAGCAATTTTCTGAACATTCCATGCTCGGGAAATCACATCATTTGGTCTAAATAGTTTGT
CATTTTGTAAACAACTTTTG
Found at i:11868090 original size:433 final size:434
Alignment explanation
Indices: 11866597--11868315 Score: 1856
Period size: 433 Copynumber: 4.0 Consensus size: 434
11866587 AGACGATTCA
* * *** *
11866597 GTCTTTGAATTAAAAACTTAATTACGTGAGAATT-TTTCTCTCTTGGTTCTTTTTCAAACTT-TC
1 GTCTTTGAATAAAAAACTTAATTACGTGAGAATTATTTCTCTCTTGGATCTTGGCCGAACTTCTC
* * ** * * *
11866660 GAACTTGTAAAACTTTTATGAGTT-TGATTATAACTTTAGTTCCTTAAAGTATTCAAAATGATCC
66 GAACTTTTCAAACTTTTACAAGTTCT-TTTATAACTTTAGTTCCTTAAAGTATTCAAGACGATCC
* * * * * * * *
11866724 ATTCCTTCGAGCAATTTTTCGAACCTTCAATGCTCGAGATATCACATTATTTGTTCTAAACA-AT
130 ATTCCTTCAAGCAATTTTTCAAACATTCAATGCTCAAGAAATCACATTATTTGGTCTAAATAGTT
* * *
11866788 T-TCATTTTATAAACAACTTTTGTTCTTTGGAA-AAAAAACTTATTTACATGAGAATTATTTTTC
195 TGTCATTTTATAAACAACTTTTGGTCTTT-GAATAAAAAACTTATTTACGTGAGAATTATTTCTC
* * * * ** * *
11866851 TCTTGGATCTAT-GTCGAACTTTCGAAC-ATTCAAACTTTTACAAATTCTTTTATAACTTTGGTT
259 TCTTCGATCT-TGGCCGAACTTCCAAACTATTCAAACTTTTACAAGGTCTTTTATAACTTCGATT
* * * * *
11866914 CCTTACAGTATTCATGATGATTCACTCTTTCGAGCAATTTTTTGAACATTCCATGCTAGGGAAAT
323 CCTTAAAGTATTCAAGATGATCCACTCTTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAAT
*
11866979 CGCATT-ATTTGGTTTAAATAGTTTATCATTTTGTAAACAACTTTTG
388 CGCATTCATTTGGTTTAAATAGTTTGTCATTTTGTAAACAACTTTTG
* * * * * * *
11867025 GTCTTTAAAT-TAAAACTTATTTACGTGAGAATTGTTTGTCCCTT-GATTCTTGGTCGAACTTC-
1 GTCTTTGAATAAAAAACTTAATTACGTGAGAATTATTTCTCTCTTGGA-TCTTGGCCGAACTTCT
* * *
11867087 CGAACTTCTCAAACTTTTACAAGTTCTTTTATAACTTAAGTTACTTAACA-TATTCAAGACGATC
65 CGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTTAGTTCCTTAA-AGTATTCAAGACGATC
* * * *
11867151 TATTCCTTTAAGCAA-TTTTCAGAACATTCAATGCTCAAGATATCACATCATTTGGTCTAAATAG
129 CATTCCTTCAAGCAATTTTTCA-AACATTCAATGCTCAAGAAATCACATTATTTGGTCTAAATAG
* * * *
11867215 TTTGTCATTTTATAAACAACTTTTGGTTTTTGAATTAAAAACTTATTTTCGTGAGAATTGTTTCT
193 TTTGTCATTTTATAAACAACTTTTGGTCTTTGAATAAAAAACTTATTTACGTGAGAATTATTTCT
** * * *
11867280 CTCTTCGATCTTATCCGAACTTCCAAACCT-TTCAAACTTTTACATGTTCTTTTATAACTTCAAT
258 CTCTTCGATCTTGGCCGAACTTCCAAA-CTATTCAAACTTTTACAAGGTCTTTTATAACTTCGAT
* * * * *
11867344 TCCTTAAAGTATTCAAGACGATCCATTCCTTT-TAACAAATTTTGT-GAACATTTCATGCTCGGG
322 TCCTTAAAGTATTCAAGATGATCCACT-CTTTCGAGC-AATTTT-TCGAACATTCCATGCTCGGG
* *
11867407 AAATCACA-TCAGTTGGTTTAAATAGTTTGTCATTTTGTAAACAACTTTTG
384 AAATCGCATTCATTTGGTTTAAATAGTTTGTCATTTTGTAAACAACTTTTG
* * * * * *
11867457 GTCTTTGAATTAAAAAA-TTAGTTACGTGAGAATTATTACTCTCCTGGTTCCTAGCCGAAC-TCT
1 GTCTTTGAA-TAAAAAACTTAATTACGTGAGAATTATTTCTCTCTTGGATCTTGGCCGAACTTCT
* * ** * * *
11867520 CGAACTTTTCAAACTTGTACTAGTTC-TTTATAACTTCGGTTCCATCAAGTATTCAAGACAATCC
65 CGAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTTAGTTCCTTAAAGTATTCAAGACGATCC
* ** * * * *
11867584 ATTCCTTCAAGTAATTTTTTGAACATTCCATGCTCAGGAAATCGCATTATTTGGTCTAGATAGTT
130 ATTCCTTCAAGCAATTTTTCAAACATTCAATGCTCAAGAAATCACATTATTTGGTCTAAATAGTT
* * * *
11867649 TTTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAACTTATTTATGTGAGAA-TAGTTTGT
195 TGTCATTTTATAAACAACTTTTGGTCTTTGAA-TAAAAAACTTATTTACGTGAGAATTA-TTTCT
* * * * *
11867713 CTATTGGATATTGGCCGAACTTCCGAACTATCCAAACTTTTACAAGGTCTTTTATAACTTCGATT
258 CTCTTCGATCTTGGCCGAACTTCCAAACTATTCAAACTTTTACAAGGTCTTTTATAACTTCGATT
* * ** * * * * *
11867778 TCTTATAGTATTCAAGATGATCCTTTCTTTCGAGCACTTTTCCGAACATTCTATGCTCGAGATAT
323 CCTTAAAGTATTCAAGATGATCCACTCTTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAAT
* * *
11867843 CG-ATTCATTTAGTGTAAATAGTTTGTCATTTTGTAAAGAACTTTTG
388 CGCATTCATTTGGTTTAAATAGTTTGTCATTTTGTAAACAACTTTTG
* * * *
11867889 GCCTTTGAAGAAAAAACTTAATGACGTGAGAATTATTTCTCTCTTCGATCTTGGCCGAACTTCT-
1 GTCTTTGAATAAAAAACTTAATTACGTGAGAATTATTTCTCTCTTGGATCTTGGCCGAACTTCTC
* *
11867953 GAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATTCA
66 GAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTTAGTTCCTTAAAGTATTCAAGACGATCCA
* * * * ** * * *
11868018 CTCCTTCAAGCAATTTTCCAAACATTCCATTCTCGGGAAACCGCATGATTTGGTCTAAATAGTTT
131 TTCCTTCAAGCAATTTTTCAAACATTCAATGCTCAAGAAATCACATTATTTGGTCTAAATAGTTT
* * * *
11868083 GTCATTTTGTAAACAACTTTAGGTCTTCGAATAAAAAAGTTATTTACGTGAGAATTATTTCTCTC
196 GTCATTTTATAAACAACTTTTGGTCTTTGAATAAAAAACTTATTTACGTGAGAATTATTTCTCTC
* * * *
11868148 TTTCGATCTTGTCCAAACTTTCAAACTTTTCAAACTTTTACAAGTGT-TTTTATAACTTC-AGTT
261 -TTCGATCTTGGCCGAACTTCCAAACTATTCAAACTTTTACAAG-GTCTTTTATAACTTCGA-TT
* * *
11868211 ACTTAAAGTATTCAAGATGATTCACTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAAT
323 CCTTAAAGTATTCAAGATGATCCACTCTTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAAT
* *
11868276 CGCA-TCATTTGGTCTAAATAGTTTG-CTATTTTCTAAACAA
388 CGCATTCATTTGGTTTAAATAGTTTGTC-ATTTTGTAAACAA
11868316 GTTATAAAAG
Statistics
Matches: 1073, Mismatches: 181, Indels: 69
0.81 0.14 0.05
Matches are distributed among these distances:
427 27 0.03
428 127 0.12
429 8 0.01
430 70 0.07
431 63 0.06
432 353 0.33
433 417 0.39
434 8 0.01
ACGTcount: A:0.29, C:0.18, G:0.13, T:0.41
Consensus pattern (434 bp):
GTCTTTGAATAAAAAACTTAATTACGTGAGAATTATTTCTCTCTTGGATCTTGGCCGAACTTCTC
GAACTTTTCAAACTTTTACAAGTTCTTTTATAACTTTAGTTCCTTAAAGTATTCAAGACGATCCA
TTCCTTCAAGCAATTTTTCAAACATTCAATGCTCAAGAAATCACATTATTTGGTCTAAATAGTTT
GTCATTTTATAAACAACTTTTGGTCTTTGAATAAAAAACTTATTTACGTGAGAATTATTTCTCTC
TTCGATCTTGGCCGAACTTCCAAACTATTCAAACTTTTACAAGGTCTTTTATAACTTCGATTCCT
TAAAGTATTCAAGATGATCCACTCTTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGC
ATTCATTTGGTTTAAATAGTTTGTCATTTTGTAAACAACTTTTG
Found at i:11869152 original size:422 final size:421
Alignment explanation
Indices: 11868314--11887445 Score: 16738
Period size: 422 Copynumber: 45.4 Consensus size: 421
11868304 TTTTCTAAAC
* * * *
11868314 AAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCGAAAGTTCGCCAAAGAACTAGGAGAGATT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC----G-T--CC-AAGAACCAAGAGAGA-T
* * *
11868379 A-TATTCTCACGTAAATAA-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAAT
57 ACAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * * *
11868442 TTGGACCAAATGATGTGACTTCCCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCG
122 TTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAATG-CTCGAAGGAATGGATCG
* * * *
11868507 TCTTGAATACTTTAAGGAATCGAAGTTATAAAAGAGCTCATAAAAGCTTG---AG----AAGTTC
185 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTC
* * * * *
11868565 GTCCAAGAACC-AGAAGAGATTCAATTCTCACATAAATAAGTTTTTAATTCAAAGATCAATAGTA
250 GTCCAAGAACCAAG-AGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* *
11868629 GTTTA-AAAATGACAAACTATTTGGACCAAATGATACGATTTCTCGAGCATGGAATGTTCGGGAA
314 GTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAA
* * * *
11868693 A-TGTCTCGAAGGAAAGGATTGTCGTGAATATTTTAAGGAACCG
379 ATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11868736 AAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCGTCCTAA-AACGAAGAGAGATACAATTCT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCC-AAGAACCAAGAGAGATACAATTCT
* * *
11868800 CTCCT-AATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTCCAAAATGACAAACTATTTGGACCA
65 CTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
* * * * *
11868864 AATGATGCGATTTCTCGAGCAAGAAATGTTCGAAATATAGCTTGAAGGAATAGATCGTATTGAAT
130 AATGATGCGATTTCTCGAGCATGGAATGTTCGAAA-AT-GCTCGAAGGAATGGATCGTCTTGAAT
* **
11868929 ACTTTAAGGAACCGAAGTTATAAATGAACTCCAAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAG
193 ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-CAAAGTTCGTCCAAG
* * * *
11868994 AACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-A
257 AACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
* * * * * ** * *
11869058 AATGACAACCTATTTTGACCAAATGATGCAATTTCACGAGCCTGGAATACTCAAAAAATTGCTCG
322 AATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATTGCTCG
* *
11869123 AAGGAATGGATCATCTTGAACACTTTAAGGAACCG
387 AAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * *
11869158 AAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCGGAAGTTCGTCAAAGAACTAGGAGAGATT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC----G-TC--C-AAGAACCAAGAGAGA-T
* * * *
11869223 A-TATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTCACAAAATGACAAACAAT
57 ACAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * * *
11869287 TTGGACCAAATAATGCGACTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATTG
122 TTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAATG-CTCGAAGGAATGGATCG
* * *
11869352 TCTTGAATACTATAAGGAATCGAAGTTATAAAAGAGCTCGTAAAAGTTTG---AG----AAGTTC
185 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTC
* * *
11869410 GTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAGACCAATAGTAG
250 GTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * *
11869475 TTTACAAAATGACAAACTATTTGGACCAAATGATACGATTTCTCAAGCACGGAATGTTCG-GCAA
315 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAG-AA
* * *
11869539 A-TGTCTCGAAGGAAAGGATCATCGTGAATACTTTAAGGAACCG
379 ATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * *
11869582 AAGTTATAAAAGAACTCGTAAAAGTTTGACCAGTTCGTCCTAA-AACGAAGAGAGATGCAATTCT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCC-AAGAACCAAGAGAGATACAATTCT
* * * *
11869646 CAT-GTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACC
65 C-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACC
* * **
11869709 AAATGATGCAATTTCTCGAGCCTGGAATACTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAA
129 AAATGATGCGATTTCTCGAGCATGGAATGTTCG-AAAA-TGCTCGAAGGAATGGATCGTCTTGAA
* * *
11869774 TACTTTAAGGAACCGAAGTTATAAAAGAACTTGT-AAGGTTTGACAAGTTCAGAAGTTTGT-CAA
192 TACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCA-AAGTTCGTCCAA
* * *
11869837 TGAACTAGGAGAGATTA-TATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTA
256 -GAACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTA
* * * * * *
11869901 CAAAATGAGAACCAATTTGGACCAAATGATGCGACTTC-C-CGCATGGAATGTTCGGGAAA-TGT
319 CAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATTG-
* *
11869963 CTCGAA-GAA-AGATCGTCTTGAATACTTTAAGGAACTG
383 CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * *
11870000 AAGTTATAAAGGAACTTGAAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTG---A----C-AAGTTCGTCCAAGAACCAAGAGAGATA
** * * * *
11870065 CAATTCTCAAGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * ** * * *
11870129 TGGACCAAATGATGCAATTTCTTGAGCACGGAATACTCAAAAATTCTCGAAGGAATTGATCGTCT
123 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAAAATGCTCGAAGGAATGGATCGTCT
* * * *
11870194 TGAATACTTTAAGGAATCGAAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCAGAAGTTTGT
188 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCA-AAGTTCGT
* * * * *
11870259 CAAAGAACTAGGAGAGATTA-TATTCTCACGTAAATAACTTTTTAATTCAAAGACCAAAAGTTGT
252 CCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * * * *
11870323 TTAC-AAATGAGAAGACCAATTTGGACCAAATGATGCGACTTCTCGAGCGTGGAATGTTCGGGAA
316 TTACAAAATGACAA-A-CTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAA
* ** *
11870387 A-TGTCTCGAAGAAAACGATCGTCTTGAATACTTTAAGGAACTG
379 ATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11870430 AAGTTATAAAGGAACTCGAAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C---G----TCCAAGAACCAAGAGAGATA
** * * * *
11870495 CAATTCTCAAGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* ** ** * *
11870559 TGGACCAAATGATGCAATTTCTCGAGCCCGGAATACTCGAAAATTGCTTGAAGGAATTGATCGTC
123 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAAAA-TGCTCGAAGGAATGGATCGTC
* * * *
11870624 TTGAATACTTTATGGAACCGAAGTT-TATAAA-AACTTGTAAAGGTTTGACAAGTTCGGAAGTTC
187 TTGAATACTTTAAGGAACCGAAGTTATA-AAAGAACTCGTAAAAGTTTGACAAGTTC-AAAGTTC
* * *
11870687 GTCAAAGAA-CTAG-GAGATATTATATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
250 GTCCAAGAACCAAGAGAGATA-CA-ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
* * * * * * *
11870750 TTTTTGCAAAATGACAAACAATTTGGACCAAATGACGCGACTTCCCGAGCATGGAATGTTCGGGA
313 TGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGA
* * * *
11870815 CA-TGTCTCGAAGGAAAGGATCGTCTTGAATAGTTTAAGGAATCG
378 AATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * *
11870859 AAGTTATAAAAGAGCTCGTAAAAGTTGGAGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* * * * * * *
11870924 ACATAAATAAGTTTTTAATTCAAAGACCAATAGTAGTTTACAAAATGACAAACTATTTAGAACAG
66 TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA
* * * * *
11870989 ATGATACGATTTCTGGAGCATGGAATGTTCGAGAAATGTCTCGAAGGAAAGGATCGTCGTGACTA
131 ATGATGCGATTTCTCGAGCATGGAATGTTCGA-AAATG-CTCGAAGGAATGGATCGTCTTGAATA
* * *
11871054 CTTTAACGAATCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC---G-TC--CTAA-AA
194 CTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCAAGAA
** * * * *
11871112 TGAAGAGAGATACAGTTCTCTCCT-AATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTACAAAA
259 CCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAA
* * * * * * *
11871176 TGACAAACTATTTGGACCAAATGATGCTATTTCTCGAGCAAGAAATGTTCAAAAAATAGCTTGAA
324 TGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATTGCTCGAA
* * *
11871241 GGAATGGATCGTATGGAATACTTTAAGGAATCG
389 GGAATGGATCGTCTTGAATACTTTAAGGAACCG
* **
11871274 AAGTTATAAATGAACTCAAAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAG-ACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTG---A----C-AAGTTCGTCCAAGAACCAAGAGAGATA
* * * *
11871338 CAATTCTCAT-GTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTAT
58 CAATTCTC-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * * *
11871401 TTGGACCAAATGATGCAATTTCTCGAGCCTGAAATACTT-GAAAATTGCTCAAAGGAATGGATCG
122 TTGGACCAAATGATGCGATTTCTCGAGCATGGAAT-GTTCGAAAA-TGCTCGAAGGAATGGATCG
* *
11871465 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCGAAAGTT
185 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC-AAAGTT
* * * *
11871530 CGTCAAAGAACTACGAGAGATTA-TATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
249 CGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
* * * * * * *
11871594 TGTTTACAAAATGACAAACAATTTGGACCAAATAATGCGACTTCCCAAGAATGGAATGTTCGGGA
313 TGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGA
* *
11871659 AA-TGTCTC-ATAGGAAAGGATCGTCTTGAATTCTTTAAGG-ACTCG
378 AATTG-CTCGA-AGGAATGGATCGTCTTGAATACTTTAAGGAAC-CG
* * * *
11871703 AAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCCTCCAATAACCAAAAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
** * *
11871768 TTC-T-AATAAGTTTTTAATTCAAAGACCAATGGTAGTTTACAAAATGACAAACTATTTAGACCA
66 -TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
* * * *
11871831 AATGATACGGTTTCTCGAGCATGGAATGTTCGAGAAATGTCTCGAAGGAAAGGATCGTCGTGAAT
130 AATGATGCGATTTCTCGAGCATGGAATGTTCGA-AAATG-CTCGAAGGAATGGATCGTCTTGAAT
* *
11871896 ACTTTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTC---G-TC--CTAA-A
193 ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCAAGA
** * * * *
11871954 ATGAAGAGAGATACAATTCTCTCCT-AATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTCCAAA
258 ACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAA
* * * * *
11872018 ATGACAAACTATTTGGACCAAATGATGCGATTTCTTGAGCAAGAAATGTTCGA-AATATAGCTTG
323 ATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAA-ATTGCTCG
* *
11872082 AAGGAATAGATCGTATTGAATACTTTAAGGAACCG
387 AAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11872117 AAGTTATAAATGAACTCGAAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAGAACCCAAGAGAGAT
1 AAGTTATAAAAGAACTCGTAAAAGTTTG---A----C-AAGTTCGTCCAAGAA-CCAAGAGAGAT
*** * * * *
11872182 ACAATTCTCAATTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTAT
57 ACAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * * ** * *
11872246 TTAGACCAAATGATGCAATTTCACGAGCCTGGAATACTCAAAAAATTGCTCGAAGGAATGGATCA
122 TTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAA-TGCTCGAAGGAATGGATCG
* *
11872311 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCAGAAGTT
185 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCA-AAGTT
* * * * * *
11872376 CGTCAAAGAACTAGGAAAGATTA-TATTCTCACGTAAATAAGCTTTTAATTCAAAGACCAAAAGT
249 CGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
* * * *
11872440 TGTTTACAAAATGACAAACAATTTGGACCAAATGATGCGACTTCCCGAGCATGGAATGTTCGGGA
313 TGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGA
* * *
11872505 AA-TGTCTC-ATAGGAAAGGATCGTCTTGAATTCTTTAAGGAATCG
378 AATTG-CTCGA-AGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * *
11872549 AACTTAT-AAAGAGCTCGTAAAAGTTTGAGAAGTTCGTCCAAGAACCAAAAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* ** * *
11872613 TTC-T-AATATGTTTTTAATTCAAAGACCAATGGTAGTTTACAAAATGACAAACTATTTAGACCA
66 -TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
* * * * * *
11872676 AATGATACGGTTTCTCGAGCATGGAATGTTCGGGAAATGTCTCAAAGGAAAGGATCGTCGTGAAT
130 AATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAATG-CTCGAAGGAATGGATCGTCTTGAAT
* * * *
11872741 ACTTTAAGTAATCGAACTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC---G-TC--CTAA-A
193 ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCAAGA
* * * *
11872799 ACGAAGAGAGATACAATTCTCTCCT-AATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTACAAA
258 ACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAA
* * * * * *
11872863 ATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCAAGAAATGTTCAAAAAATAGCTTGA
323 ATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATTGCTCGA
* * *
11872928 AGGAATGGATCGTATGGAATACTTTAAGGAATCG
388 AGGAATGGATCGTCTTGAATACTTTAAGGAACCG
*
11872962 AAGTTATAAATGAACTCG-AAACAGTTTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGAT
1 AAGTTATAAAAGAACTCGTAAA-AGTTTG---A----C-AAGTTCGTCCAAGAACCAAGAGAGAT
* * * * *
11873026 ACAATTCTCAT-GTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAGTGACAACCTA
57 ACAATTCTC-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA
* * ** *
11873089 TTTGGACCAAATGATGCAATTTCTCGAGCCTGGAATACTCGAAAAATTGCTCAAAGGAATGGATC
121 TTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCG-AAAA-TGCTCGAAGGAATGGATC
* * *
11873154 GTCTTGAATACTTAAAGGAACCG-AGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCGAAAGT
184 GTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC-AAAGT
* * * * *
11873218 TCGTCAAAGAACTACGAGAGATTA-TATTCTCACGTAAATAAGTTTTTAATCCAAAGACCAAAAG
248 TCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * * *
11873282 TTGTTTACAAAATGACAAACAATTAGGACCAAATGATGCGACTTCCCGAGAATGGAATGTTCGGG
312 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAG
* * *
11873347 AAA-TGTCTC-ATAGGAAAGGATCGTCTTGAATTCTTTAAGGAATCG
377 AAATTG-CTCGA-AGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * *
11873392 AAGTTATAAAAGAGCTCGTAAAAGTTAGAGAAGTTCGTCCAAGAACCAAAAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* * ** *
11873457 TTC-T-AATAAGTTCTTAATTCAAAGACTAATGGTAGTTTACAAAATGACAAACTATTTGGACCA
66 -TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
** * * * * * * * *
11873520 AATGACACGGTTTTTCGAGCACGAAATGTTCGGGAAATGTCTCAAAGGAAAGGATCGTCATGAAT
130 AATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAATG-CTCGAAGGAATGGATCGTCTTGAAT
* * * * * *
11873585 ACTTTAAGTAATCGAACTTATAAAAGAACTCGTAACAGTTTG---A---C-AAGTTCGACCTAGA
193 ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCAAGA
** * * * *
11873643 AGGAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AA
258 ACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAA
* * * ** * *
11873707 ATGACAACCAATTTGGACCAAATGATGCAATTTCTCGAGCCCGGCAACCTATTTG-GTCCAAA-T
323 ATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG-AA--TGTTCGAG---AAATT
* **** * * * * ** *
11873770 GAT-GCAATTTCTCGA--GCCTAGAATGCTCGAA-AAATTGCTCG
382 GCTCG-AAGGAATGGATCGTCTTGAATACTTTAAGGAA---C-CG
* ** * * * * * ** *
11873811 AAG---GAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTT-ATAAAAGAACTCGTAA-AG-T
1 AAGTTATAAAAGAAC-TCGT-AAAAGTTT---G-A-C-AAGTTCGTCCAAGAAC-C--AAGAGAG
* * * *
11873870 TTGACAAGTTCGTCCTAGAACCAAGAGAGATGCACTTCTCACATAAATAAGTTTTTAATTCAAAG
55 AT-ACAA-TTC-T-CTCG---TAA-ATA-A-G---TT-T----T---TAA--T------TCAAAG
* * *
11873935 ACCAACAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGGGCATGGAA
91 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * ** * * *
11874000 TGTTCGAAAAATAGATTGAATGAATGGATCACCGTGAATACTTTAAGGAACTGAAGTTATAAAGG
156 TGTTCG-AAAAT-GCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
** * * * **
11874065 AACTAATAAAAGTCTAACAAGTTCCATAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATAT
219 AACTCGTAAAAGTTTGACAAGTT-CAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT
* * *
11874130 AAATAAG-TTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAATGA
283 AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA
* * ** * * *
11874193 TGCAATTTGTTAAGCCA-GGAATGCTTTGA-AAATTACTTGAAGGAATGGATCGTCTTGAATACT
348 TGCGATTTCTCGAG-CATGGAATG-TTCGAGAAATTGCTCGAAGGAATGGATCGTCTTGAATACT
11874256 TTAAGGAACCAAAG
411 TTAAGGAACC---G
* ** * * * * *
11874270 AACTCGTAAAAG--TTTG-AAAAGTTTGA-AAGTTTGACCAAGAACCAGGAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* * *
11874331 ACGTAAATAAGTTTTTTAATTCAATGACAAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
66 TCGTAAATAAG-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
* * * * * * * *
11874396 AATGAAGCAATTTCCCGTGCATGGAATGTTTAGGAAATGTCTCGAAGGAAAGGATTGTCTTGAAT
130 AATGATGCGATTTCTCGAGCATGGAATG-TTCGAAAATG-CTCGAAGGAATGGATCGTCTTGAAT
* * *
11874461 ACGTTAAGGAACCGAAGTTATAAATGAACTCATAAAAGTTTGACAAG-T---A---CGTCCAAGA
193 ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCAAGA
* * ** *
11874519 ACCATGAGAGATACAATTCTCACGTAAATAAGTTTTTAACTCAAAGACCAAATTTTTTTTTTACA
258 ACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAA--AGTTGTTTACA
* *
11874584 AAATGACAAACTATTTAGACCAAATAGTAT--GATTT-TCAGAGCATGGAATGTTCGGGAAA-TG
321 AAATGACAAACTATTTGGACCAAAT-G-ATGCGATTTCTC-GAGCATGGAATGTTCGAGAAATTG
* * * **
11874645 TCTTGAAGGGAA-GGATCGTGTTGAATACTTTAA-AAAAAG
383 -CTCGAA-GGAATGGATCGTCTTGAATACTTTAAGGAACCG
** *
11874684 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCATTAGAGATACAATTTTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* * *
11874749 ACGTAAATAAGTTTTTAATTCAAAGACTAAAAGTTTTTTACAAAATGACAAACTATTTGGACCAA
66 TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA
* * * *
11874814 ATGATGCAATTTC-CCATGCGTGGAATGTTCGAGAAATGTCTCGAAGGATTGGATCGTCTTGAAT
131 ATGATGCGATTTCTCGA-GCATGGAATGTTCGA-AAATG-CTCGAAGGAATGGATCGTCTTGAAT
* * ** *
11874878 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTGGAAGTTCGTACAAGA
193 ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCAAGA
* * ** * *
11874943 ACCAAGAGAGATATAATTCTCACATAAATAAGGATTTAATTCGAACACCAAAAGTTGTTTACAAA
258 ACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAA
* * * ** *
11875008 ATGACAAACTATTTGGACCAAATGATGTGATTTCTCGAGCATGGAATGCTC-AAAAAAAGCTTGA
323 ATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATTGCTCGA
* *
11875072 AGGAATGGATCGTCGTGAATACATTAAGGAACCG
388 AGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * *
11875106 AAGTTATAAAAGAAGTCGTAAAAGTTTGAGATGTTCGTCCAAGAA-GAAGGAGAGATACAATTCT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCT
** * * * * * * *
11875170 CAT-GTAAATTTGCTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATTACAAACTATTTCGTCC
65 C-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACC
* * *
11875233 AAATGATGCGATTTCTCGAGCAAGGAATGCTCGATAAATAGCTCGATGGAATGGATCGTCTTGAA
129 AAATGATGCGATTTCTCGAGCATGGAATGTTCGA-AAAT-GCTCGAAGGAATGGATCGTCTTGAA
* * *
11875298 TACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACGAGTTCAAATGTTTGTCCAA
192 TACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAA-GTTCGTCCAA
** * * * * * *
11875363 GAATGAGGAGAGATACATTTCTCACGAAAATAAGTTTTTACTTCAATGACCGAAAGTTGTTTACA
256 GAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
* * *
11875428 AAATGACAAACTATTTGGACCAAATGAAGCGATTTGCT-GTGCATGGAATGTTCGGGAAA-TGTC
321 AAATGACAAACTATTTGGACCAAATGATGCGATTT-CTCGAGCATGGAATGTTCGAGAAATTG-C
* * * * ***
11875491 TCGAAGGAAAGTATCGTGTTGAATACTTTATGGAGTAG
384 TCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
*
11875529 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCATGAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* *
11875594 ACGTAAATAAGTTTTTAATTCAAAGACC-AAAGTTGTTTACAAAATGACAAACAATTTGGACCAA
66 TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA
* * * * * * *
11875658 ATGAAGCTATTT-TCTGTGCATGG-ATGTTCGAGAAATGTCTCAAAGGAAAGGATCATGTTGAAT
131 ATGATGCGATTTCTC-GAGCATGGAATGTTCGA-AAATG-CTCGAAGGAATGGATCGTCTTGAAT
** *
11875721 ACTTTAAGGAACAAAATTTATAAAAGAACTCGTAAAAGTTTG---A---C-AAGTTCGTCCAAGA
193 ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCAAGA
*
11875779 A-C----------C-A-T-T-A-G---A-GA-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAA
258 ACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAA
* * *
11875823 ATGACAAACTATTTGGACCAAATAATGCGATTTC-CCATGCAAT-GAATGCTCGAGAAA-TGTCT
323 ATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GC-ATGGAATGTTCGAGAAATTG-CT
* * *
11875885 CGAAGGAATGGATAGTCTTGAATACTATAAGGAACCA
385 CGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * *
11875922 AAGTTATAATTAAAAGACCTCGTAAAAATTTGACAAGTTTGGAAGTCATCCAAGAACCAAGGGAG
1 AAG-T-T-A-TAAAAGAACTCGTAAAAGTTTGACAAG--T-----TCGTCCAAGAACCAAGAGAG
* ** * *
11875987 ATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATTACAAACT
55 ATACAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACT
* *
11876052 ATTTGGACCAAATGATGC-ATTTTCTCGAGCATGTAATGTTCAGAAAATAGATCGAAGGAATGGA
120 ATTTGGACCAAATGATGCGA-TTTCTCGAGCATGGAATGTTC-GAAAAT-GCTCGAAGGAATGGA
* *
11876116 TCGTCGTGAATACTTTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTC----
182 TCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAG
* * *
11876177 -T--TCCAAGAA-CAAGGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAA
247 TTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
** * * * * * *
11876238 CCTGGTTA-AAAATGACAAACTATTTGGTCGAAATGATGGGATTTCCCGAGCATGGAATGCTCG-
311 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGA
* * * * *
11876301 GTAAATAGCTCGATGGAAAGGATCATCTTGAATACTTTAAGGAACTG
376 G-AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
11876348 AAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTG---A----C-AAGTTCGTCCAAGAACCAAGAGAGATA
* * * * *
11876412 CAATTC-C-CGTATAAATAAGTTTTTATTTTAAAGACCAAAAGTTGGTTAC-AAATGGCAACCTA
58 CAATTCTCTCG--TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA
* * ** *
11876474 TTTGGA-CAACATGATGCGATTTCTCGAGAATGGAATGCTAAAAAAGTTGTTCGAAGGAATGGAT
121 TTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGAAAA--TGCTCGAAGGAATGGAT
* * * *
11876538 AGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCATAAAAGTTTGACGAGTTCGAATG
183 CGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC-AAAG
* ** * * * * * *
11876603 TTTGTCCAAGAATGAGGAGAGATACAATTCTCATGAAAATATGTTTTTAATTCAATGACCAAAAT
247 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * * * * *
11876668 TTGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCAATTTTTTGTGCATGGAATTTTTGGG
312 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAG
* * * ** *
11876733 AAA-TGTCTTGAAGGAAAGGATCGTGTTGAATACTTTAAACAACAG
377 AAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * *
11876778 AAGTTACAAAAGAACTCGTAAAAGTTTGACGAGTTCGTCCAAGAACCATGAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* * *
11876843 AT-GTAAATAAGTTTTTAACTCAAAGACCAAAAGTTGATTACAAAATGACAAACTCTTTGGACCA
66 -TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
* ** * * *
11876907 AATAATATGATTTCTAGAGCATGGAATGTTCCAGAAATTGCTCGAAGAAATGGATCGTCTTGAAT
130 AATGATGCGATTTCTCGAGCATGGAATGTT-C-GAAAATGCTCGAAGGAATGGATCGTCTTGAAT
* * * *
11876972 ACTATAAGGAACCGAAGTTATAAAAGAACTAGTAAAAATTTGACAAGTTTGAAAGTTCGTCCAAG
193 ACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTCAAAGTTCGTCCAAG
** *
11877037 AACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACC-AAAGTTGTTTACAA
257 AACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
* * * ** *
11877101 AATGACAAACTATTTGGACCAAATCATGCGATTTCTTGAGCATGGAATGTTCGAAAAATAACTTG
322 AATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATTGCTCG
* ** * * *
11877166 AAGGAATGGATTGTCGCGAATACTTTAAGGTAGCA
387 AAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * * *
11877201 AAATTATAAAAGAAGTCATAAAAGCTTT-ACAAGTTCATCCAAGAA-CAAGGAGAGATACAAGTC
1 AAGTTATAAAAGAACTCGTAAAAG-TTTGACAAGTTCGTCCAAGAACCAA-GAGAGATACAATTC
* * ** * * *
11877264 TCAT-GTAAATTAGTTTTTAATTCAACGACCAAAACCTGGTTA-AAAATGACAAAATATTTGGTC
64 TC-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAC
* * * * *
11877327 CAAATGATG-GATTTCCCGAGCATGGAATGCTCGGTAAATGGCTCGATGGAAAGGATCGTCTTGA
128 CAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAAT-GCTCGAAGGAATGGATCGTCTTGA
11877391 ATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCGTCCA
191 ATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-CAAAGTTCGTCCA
* ** * * * *
11877455 AGAACCAAGAGAGATACAATTCCCATATAAATAAGTTTTTATTTTAAAGACTAAAAGTTGGTTAC
255 AGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTAC
* * *
11877520 -AAATGACAACCTATTTGGA-CAACATGATGCGATTTCTCGAGCATGGAATGCTAGA-AAAGTTG
320 AAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAA-TTG
* *
11877582 TTCGAAGGAATGGATAGTCTTGAATACTTTAAGGAACCG
383 CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
** * * *
11877621 AAGTTATAAAAGAACTTATAAAAGTTTGACGGGTTTGAATGTTTGTCCAAGAACGAGGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGAC-------AA-GTTCGTCCAAGAACCAAGAGAGATA
* ** * * *
11877686 CGATTCTCAAGAAAATATGTTTTTAATT-------C--AA--TG---ACCAAATGACAAACTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * * * *
11877737 TGGACCAAATGAAGCAATTT-TCTGTGCATGGAATTTTCGAGAAATGTCTTGAAGGAAAGGATCG
123 TGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGA-AAATG-CTCGAAGGAATGGATCG
* ** * *
11877801 TGTTGAATACTTTAAACAACTGAAGTTACAAAAGAACTCGTAAAAGTTTGAC--G-----AGTTC
185 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTC
* * * **
11877859 ATCCAAGAACCATGAGAGATACAATTCTCATGTAAATAAGTTTTTAACACAAAGACCAAAAGTTG
250 GTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * * **
11877924 TTCACAAAATGAGAAACTCTTTGGACCAAATAATATGATTTC-CAGAGCATGGAATGTTC-AGGA
315 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGA-GA
* * * * *
11877987 AATTGCTTGAAGAAATGGATCGTGTTGAATACTATATGGAACCG
378 AATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11878031 AAGTTATAAAAGAACTAGTAAAAATTTGACAAGTTTGAAAGTTCGTCCAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATA
* * ** *
11878096 CAATTCTCACATAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * * * *
11878161 TGGACCAAATCATGTGATTTCTTGAGCATGGAATGTTCGGAAAATAACTTGAAGGAATGGATTGT
123 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAAT-GCTCGAAGGAATGGATCGT
** * ** * * *
11878226 CGCGAATACTTTAAGGTAGGGAAATTATAAAAGAAGTCATAAAAGTTTGACAAG-TC-----T-G
186 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCG
* * * * * *
11878284 TCCAAGAA-TAAGGAGAGATACAAGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTG
251 TCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * * *
11878348 GTTA-AAAATGACAAACTATTTGGTCCAAATGATGGGATTTC-CTGAGCATGGAAATGCTCGATA
315 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGG-AATGTTCGAGA
* * *
11878411 AA-TGCTCGATGGAAAGGATCGTCTTGAATACTTTAAGGAACCA
378 AATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11878454 AAGTTAT-AAA-AACTCGTAAAAGTTTGACAAGTTTCGTAAGTTCGTCAAAGAACTAGGAGAGAT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTC----G-TC--C-AAGAACCAAGAGAGAT
* * ** * * *
11878517 A-TATTCTCAC---AATTTG-TTTTAATTTAAAGACCAAAAGTTGTTTATAAAATGACAAACAAT
57 ACAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * * *
11878577 TTCGACCAAATGATGCAACTTCCCGAGCATGGAATGTTCGAGAAATGTCTCGAAGGAAAGGATCG
122 TTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGA-AAATG-CTCGAAGGAATGGATCG
** *
11878642 TCTTGAATACTTT-AGGAATTG-A-TTATAAAAAGAGCTCGTAAAAGTTTG---AG----AAGTT
185 TCTTGAATACTTTAAGGAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTT
* *
11878697 CGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAAGTTTTTAATTCAAAGACCAATAGT
249 CGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT-AAGTTTTTAATTCAAAGACCAAAAGT
* * *
11878762 AGTTTACAAAATGAC-AACTATTTGGGACCAAATGATACGATTTCTCGAGCATGGAATGTTCGGG
313 TGTTTACAAAATGACAAACTATTT-GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAG
* * *
11878826 AAA-TG-TC-------TCGATCG---TGAATGCTTTAAGGAACTG
377 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11878859 AAGTTATAAAAG-ACTCATAAAAGTTTGACAAGTTCGTCCTAGAACCAAGAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* * *
11878923 TCCT-AATAAGTTTTTAATTC-AAGACC-AAAGTAGTTTAC-AAATGACAAACTATTTGGACCCA
66 TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA
* * * * * *
11878984 ATGATATCGATTTCTCGAGCATGAAATGTGTTGAAAAATAGTCTTGAAGGAATGGATTGTATTGA
131 ATGAT-GCGATTTCTCGAGCATGGAATGT-TCG-AAAAT-G-CTCGAAGGAATGGATCGTCTTGA
* *
11879049 ATACTTTAA-GAACTGAAGTTATAAATGAACTCG-AAAAGTTTGACAAGTTCCAAAGTTCGTCCA
191 ATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-CAAAGTTCGTCCA
* * *
11879112 AGAACTCATAAAAGTTGATA-AGTTTCGTCCTAGAACCAAGAGAGATACAATTCTCTCCTAATAA
255 AGAAC-C--AAGAG-AGATACA-ATTC-T-C----A-C------G-TA-AA--------TAA---
* * ** *
11879176 GTTTTTAATTCAAAGACCAAAAGTAGTTCAC-AAATGACAAAAAATTT-GACAAAATGATGCG-T
289 GTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGAT
* * *
11879238 CTTCTTGAGCAT-GAATGTTTCG-GAAA-TGTCTCGAAGGAAAGGA-CGTCTTGAATACTTTATG
354 -TTCTCGAGCATGGAATG-TTCGAGAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAG
* *
11879299 GTACTG
416 GAACCG
* *
11879305 AAGTTTTATAAGAACTCGTAAAA-TTTGACAAGTTCCCAAGTTCGTCCAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTG---A-----CAAGTTCGTCCAAGAACCAAGAGAGATA
* * * * * *
11879369 CAGTTCTCAT-ATAAATAAGTTTTTTAATTGAATGACCAAAAGCTGGTTAC-AAATGAC-AACAT
58 CAATTCTC-TCGTAAATAAG-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAAC-T
* * * * *
11879431 ATTTGGACAAAATGATGAGATTTCTCGAGCATGGGAATGCTCGGAATATTGCTCAAAGGAATGGA
120 ATTTGGACCAAATGATGCGATTTCTCGAGCAT-GGAATGTTC-GAA-AATGCTCGAAGGAATGGA
* * * *
11879496 TAGTCTTGAATACATTAAGG-ACTGAAGTTATAAAA-AACTCGTAGAAGTTTGACAAGTTCGAAA
182 TCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC-AAA
* * * * *
11879559 GTTCGTCAAAGAACCAGGAGAGATTA-TATTCTCATGTAAATAAGTTTTTAATTCATAGACCAAA
246 GTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAA
* * * * *
11879623 AGTTGTTTACGAAA-CACAAA-TAATTTGGACCAAATGATGCGAATTCCCAAGCATGGAATGTTC
310 AGTTGTTTACAAAATGACAAACT-ATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
* *
11879686 AAGAAA-TGTCTCGAAGGAA-GGATCGTCTTGAATACTTTATGGAACCG
374 GAGAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
*
11879733 AAG-T-TAAAAGAACTCGTAAAAATTTGACAAGTTCGTCCTAA-AACC-AGAGAGATACAATTCT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCC-AAGAACCAAGAGAGATACAATTCT
* * *
11879794 -TACATAAATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTTTCAAAATGACAAACTATTTGGAC
65 CT-CGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTTGGAC
* * *
11879858 CAAATGATGCAATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGAA-GAATGGATCGTCTTGA
128 CAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAAT-GCTCGAAGGAATGGATCGTCTTGA
* * * *
11879922 ATACTTTAAGGAACTGAAGTTAT-AAAGAACTCGTAACAGTCTGACAAGTTCCAAAGTTC-ACCT
191 ATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-CAAAGTTCGTCC-
* * * **
11879985 ACGAACCAAGAGAGATACAATTCTCATGTAAATAGGTTTTTAATTCAAAGACCAAAAGCAAG-TT
254 AAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTT
* * * * * *
11880049 AC-AAATGACAACCTATTTGGACCAAATGATGAGATTTCTCGAGCCTAGAATGCTCGAAAAATTG
318 ACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATTG
* * *
11880113 CTCGAAGGAATGAATCATCTTGAATGCTTTAAGGAACCG
383 CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * *
11880152 AAGTTATAAAAGAACTCGTAGAAGTTTGACAAGTTCGAAAGTTTGTCCAAGAACGAGGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--------GTCCAAGAACCAAGAGAGATA
* *
11880217 CAATTCTCACGTAAATAAGTTTTTAATT-AAATAACCAAAAGTTGTTTACAAAATGACAAACTAT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAA-GACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * * * *
11880281 TTGGAGCAAATGAAGCGATTTC-CCATGCATGGAATGTTTGGGAAATGTCTCGAAGGAAAGGATC
122 TTGGACCAAATGATGCGATTTCTCGA-GCATGGAATG-TTCGAAAATG-CTCGAAGGAATGGATC
* * *
11880345 GTGTTGAATAC-TGAAGGAATC-AAGTTATAAAAGAAACTCGTAAAAGTTTGACAAG-T-----T
184 GTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG-AACTCGTAAAAGTTTGACAAGTTCAAAGT
* *
11880402 T-GTCCAAGAACCATGAGAGATACAATTTTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
248 TCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
* * * * *
11880466 TGTTTACAAAATGACAAACTATTTGGACCGAATAATGTGATTTGC-AGAG-ATGGAATGTTCGGG
313 TGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTT-CTCGAGCATGGAATGTTCGAG
* * * * * *
11880529 AAATTGTTCAAAGGAAAGGATCGTCCTGAATACTTTAAGAAATCG
377 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * * *
11880574 AAGTTATAAAAGAACTTGTAAAAATTTGACAAATTTGGAAGTTTGTGCAATAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATA
* ** * ** *
11880639 CAATTCTCAT-GTATATAAGGATTTAATTCGAAGACCAAAAGTTGAATACAAAATGACAAATTAT
58 CAATTCTC-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
** * * * * *
11880703 TTGGACCAAATGATGATATTTCTCAAGCATAGAATGTTCGGGAAATGTCTCAAAGGAAAGGATCG
122 TTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAATG-CTCGAAGGAATGGATCG
*
11880768 TCTTGAATACTTTAAGGAA-CGAAATTA-AAAAGAACTCGTAAAAGTTTGAC-----C--AGTTC
185 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTC
* * * * * *
11880824 GTCCTAGAACCAAGAGAGATGCACTTCTCACATAAATAAGTTTTTAATTCAAAGACCAACAGTAG
250 GTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* *
11880889 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGGGCATGGAATGTTCGAAAAA
315 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAA
* * * * ** * *
11880954 TAGATTGAATGAATGGATCACCGTGAATACTTTAAGGAACTG
380 TTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * **
11880996 AAGTT-TAAAGGAACTCATAAAAGTCTAACAAGTTCCATAGTTCGTCCAAGAACC-A-AGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGT-T------TGACA-AGTTCGTCCAAGAACCAAGAGAGATA
* * * *
11881058 CAA-TCTCAT-ATAAATAAG-TTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGAC--CCTAT
58 CAATTCTC-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * * * * *
11881117 TTGGACCAAATGATGCAATTGGT-TAGTGAATGCCTTGAATGCTT-GACAATTACTTGAAGGAAT
122 TTGGACCAAATGATGCGATT--TCT--CG-A-GCATGGAATG-TTCGA-AAATGCTCGAAGGAAT
*
11881180 GGATCGTCTTGAATACTTTAAGGAACC---------AAAGAACTCGTAAAAGTTTGACAAGTTTG
179 GGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTC
* * * * *
11881236 AAAGTTTGACCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAATGACAA
243 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11881301 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCAATTTCCCGTGCATGGAATGTT
308 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * *
11881366 -TAGGAAA-TGTCTCGAAGGAA-AGATTGTCTTGAATA-TGTTAAGGAACCG
373 CGA-GAAATTG-CTCGAAGGAATGGATCGTCTTGAATACT-TTAAGGAACCG
* * * *
11881414 AAGTTATAAATGAACTCATAAAAGTTTGACAAGTACGTCCAAGAACCATGAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* * * * *
11881479 ACGTAAAT-AGTTTTTAACTCAAAGACCAAAATTTTTTTACAAAATGACAAACTATTTAGACCAA
66 TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA
* * *
11881543 ATAGTAT--GATTTC-CAGAGCATGGAATGTTCGGGAAATGTCTTGAAGGGAA-GGATCGTGTTG
131 AT-G-ATGCGATTTCTC-GAGCATGGAATGTTC-GAAAATG-CTCGAA-GGAATGGATCGTCTTG
* **
11881604 AATACTTTAA-AAAAAGAAGTTATAAAAGAACTCGTAAAAGTTTG---A---C-AAGTTCGTCCA
190 AATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCA
** * * * *
11881661 AGAACCATTAGAGATGCAATTGTCACGTAAATAAGTTTTTAATTCAAAGACTAAAAGTTTTTTAC
255 AGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTAC
* * *
11881726 AAAATGAC-AACTATTTGGACCAAATGATGCAATTTC-CCATGCGTGGAATGTTCGAGAAA-TGT
320 AAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGAGAAATTG-
* *
11881788 CTCGAAGGATTGGATCGTCTTGAATACTTTAAGGAACCA
383 CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11881827 AAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTTGGAAGTTCGTACAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATA
* * * ** * *
11881892 TAATTCTCACATAAATAAGGATTTAATTCGAACACCAAAAGTTGTTTACAAAATGACAAACTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * * *
11881957 TGGACCAAATGATGTGATTTCCCGAGCATGGAATGCTCAAAAAATAGCTTGAAGGAATGGATCGT
123 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAAT-GCTCGAAGGAATGGATCGT
* * * *
11882022 CGTGAATACATTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTG---AG----ATGTTCG
186 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCG
* * ** * * *
11882080 TCCAAGAA-GAAGGAGAGATACAATTCTCATGTAAATTTGCTTTTAATTCAACGACCAAAAGCTG
251 TCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * * *
11882144 GTTA-AAAATGACAAACTATTTTGTCCAAATGATGCGATTTCTCGAGCATGGAATGCTCGATAAA
315 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAA
* * * *
11882208 TAGCTCGATGGAATTGATCGTCTTGAATACTTTAAGGAACCA
380 TTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * *
11882250 AAGTTAT-AAAGAACTCGTAAAAGTTTGACGAGTTCGAATGTTTGTCCAAGAACGAGGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTT---GA---C-AA-GTTCGTCCAAGAACCAAGAGAGATA
* * * * * *
11882314 CATTTCTCACGAAAATAAGTTTTTACTTCAATGACCGAAAGTTGTTTACAAAATGACAAACTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * *
11882379 TGGACCAAATGAAGCGATTTGCT--ATGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGTATC
123 TGGACCAAATGATGCGATTT-CTCGA-GCATGGAATGTTC-GAAAATG-CTCGAAGGAATGGATC
* * ***
11882442 GTGTTGAATACTTTATGGAGTAGAAGTTATAAAAGAACTCGTAAAAGTTTG---A---C-AAGTT
184 GTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTT
*
11882500 CGTCCAAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
249 CGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* * * *
11882565 GTTTACAAAATGACAAACAATTTGGACCAAATGAAGCTATTT-TCTGTGCATGGAATGTTCGAGA
314 GTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGAGA
* * * **
11882629 AA-TGTCTCGAAGGAAAGGATCATGTTGAATACTTTAAGGAACAA
378 AATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
*
11882673 AATTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAA-C----------C-A-----
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* *
11882721 T--TAGA-GA-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA
66 TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA
* * * *
11882782 ATAATGCGATTTC-CCATGCAAT-GAATGCTCGAGAAATGTCTCGAAGGAATGGATAGTCTTGAA
131 ATGATGCGATTTCTCGA-GC-ATGGAATGTTCGA-AAATG-CTCGAAGGAATGGATCGTCTTGAA
* * * * ** *
11882845 TACTATAAGGAACCAAAGTTATAATTAAAAGACCTCGTAAAAATTTGACAAGTTTGGAAG-TCAT
192 TACTTTAAGGAACCGAAG-T-T-A-TAAAAGAACTCGTAAAAGTTTGACAAG-TTCAAAGTTCGT
** *
11882909 CCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTT
252 CCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTT
* *
11882974 TACAAAATTACAAACTATTTGGACCAAATGATGC-ATTTTCTCGAGCATGTAATGTTC-AGAAAA
317 TACAAAATGACAAACTATTTGGACCAAATGATGCGA-TTTCTCGAGCATGGAATGTTCGAG-AAA
* * *
11883037 TAGATCGAAGGAATGGATCGTCGTGAATACTTTAAGGAACCG
380 TTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11883079 AAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCTTCCAAGAA-CAAGGAGAGATACAATTCT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCT
* * ** * * *
11883143 CAT-GTAAATTAG-TTTTAATTCAACGACCAAAACCTGGTTA-AAAATGACAAACTATTTGGTCG
65 C-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACC
* * * * * * * *
11883205 AAATGATGGGATTTCCCAAGCATGGAATGCTCGGCAAATAGCTCGATGGAAAGGATCATCTTGAA
129 AAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAAT-GCTCGAAGGAATGGATCGTCTTGAA
*
11883270 TACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCGTCCAA
192 TACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-CAAAGTTCGTCCAA
* * *
11883334 GAACCAAGAGAGATACAATTC-C-CGTATAAATAAGTTTTTATTTTAAAGACCAAAAGTTGGTTA
256 GAACCAAGAGAGATACAATTCTCACG--TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTA
* * * *
11883397 C-AAATGACAACCTATTTGGA-CAACATGATGCGATTTCTCGAGAATGGAA---TCTAAAAATGT
319 CAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAA--T
* *
11883457 TGTTCGAAGGAATGGATAGTCTTGAATACTTTAAGGAACCG
381 TGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * ** *
11883498 AAGTTATAAAAGAACTTGTAAAAGTTTGACGAGTTCGAATGTTTGTCCAAGAATGAGGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTT---GA---C-AA-GTTCGTCCAAGAACCAAGAGAGATA
* * * *
11883563 CAATTCTCACGAAAATATGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * * * * * * *
11883628 TGGACCAAATGAAGCAATTTTTCTGTGCATGGAATTTTTGGGAAATGTCTTGAAGGAAAGGATCG
123 TGGACCAAATGATGCGATTTCTC-GAGCATGGAA-TGTTCGAAAATG-CTCGAAGGAATGGATCG
* ** * *
11883693 TGTTGAATACTTTAAACAACAGAAGTTACAAAAGAACTCGTAAAAGTTTGAC--G-----AGTTC
185 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTC
* * **
11883751 GTCCAAGAACCATGAGAGATACAATTCTCATGTAAATAAGTTTTTAGCTCAAAGACCAAAAGTTG
250 GTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * ** *
11883816 ATTACAAAATGACAAACTCTTTGGACCAAATAATATGATTTCTAGAGCATGGAATGTTCCG-GAA
315 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT-CGAGAA
* *
11883880 ATTGCTCGAAGAAATGGATCGTCTTGAATACTATAAGGAACCG
379 ATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11883923 AAGTTATAAAAGAACTAGTAAAAATTTGACAAGTTTGAAAGTTCGTCCAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATA
* ** *
11883988 CAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* *** * * *
11884053 TGGACCAAATCATGCGATTTCTTTTGCATGGAATGTTCGAAAATAACTTGAAGGAATGGATTGTC
123 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAAAAT-GCTCGAAGGAATGGATCGTC
** * * * * * *
11884118 GCGAATACTTTAAGGTAGCAAAATTATAAAAGAAGTCATAAAAGCTTT-ACAAGTTC--A-----
187 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TTTGACAAGTTCAAAGTTCG
* * * * **
11884175 TCCAAGAA-CAAGGAGAGATACAAGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAACCTG
251 TCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * * * *
11884239 GTTA-AAAATGACAAAATATTTGGTCCAAATGATGGGATTTCCCGAGCATGGAATGCTCG-GTAA
315 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAG-AA
* *
11884302 ATGGCTC-AATGGAAAGGATCGTCTTGAATACTTTAAGGAACCG
379 ATTGCTCGAA-GGAATGGATCGTCTTGAATACTTTAAGGAACCG
11884345 AAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTG---A----C-AAGTTCGTCCAAGAACCAAGAGAGATA
* * * * * * *
11884409 CAATTCCCAT-ATAAATAAGTTTTTATTTTAAAGACTAAAAGTTGGTTAC-AAATGACAACCTAT
58 CAATTCTC-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * *
11884472 TTGGA-CAACATGATGCGATTTCTCGAGCATGGAATGCTAGAAAAGTTGTTCGAAGGAATGGATA
122 TTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGAAAA--TGCTCGAAGGAATGGATC
** * *
11884536 GTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT--TATAAAGTTTGACGGGCTCGAATG
184 GTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTA-AAAGTTTGACAAGTTC-AAAG
* * * * * *
11884599 TTTGTCCAAGAACGAGGAGAGATACGATTCTCACGAAAATATGTTTTTAATT-------C--AA-
247 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * *
11884654 -TG---ACCAAATGACAAACTATTTGGACCAAATGAAGCAATTT-TCTGTGCATGGAATTTTCGA
312 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGA
* * * ** *
11884714 GAAA-TGTCTTGAAGGAAAGGATCGTGTTGAATACTTTAAACAACAG
376 GAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * *
11884760 AAGTTACAAAAGAACTCGTAAAAGTTTGACGAGTTCATCCAAGAACCATGAGAGATACAATTCTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
* * * * *
11884825 AT-GTAAATAAGTTTTTAACTCAAAGACCAAAATTTGTTCACAAAATGAGAAACTCTTTGGACCA
66 -TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
* ** * * * * *
11884889 AATAATATGATTTC-CAGAGCATGGAATGTTAAGGAAATTGCTTGAAGAAATGGATCGTGTTGAA
130 AATGATGCGATTTCTC-GAGCATGGAATGTT--CGAAAATGCTCGAAGGAATGGATCGTCTTGAA
* * * * * *
11884953 TACTATATGGAACCGAAGTTATAATAGAACTAGTAAAAATTTGACAAGTTTGAAAGTTCGTCCAA
192 TACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTCAAAGTTCGTCCAA
* ** *
11885018 GAACCAAGAGATATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACA
256 GAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
* * * **
11885083 AAATGACAAACTATTTGGACCAAATCATGTGATTTCTTGAGCATGGAATGTTCG-GAAAATAACT
321 AAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATTGCT
* * ** * **
11885147 TGAAGGAATGGATTGTCGCGAATACTTTAAGGTAGGG
385 CGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * * *
11885184 AAATTATAAAAGAAGTCATAAAAGTTTGACAAG-TCTGTCCAAGAA-TAAGGAGAGATACAAGTC
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC-GTCCAAGAACCAA-GAGAGATACAATTC
* * * * *
11885247 TCAT-GTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTGGTC
64 TC-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAC
* * * * *
11885310 CAAATGATGGGATTTCCCGAGCATGGAATGCTCGATAAATGGCTCGATGGAAAGGATCGTCTTGA
128 CAAATGATGCGATTTCTCGAGCATGGAATGTTCGA-AAAT-GCTCGAAGGAATGGATCGTCTTGA
*
11885375 ATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCATCCA
191 ATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-CAAAGTTCGTCCA
* ** * * *
11885439 AGAACCAAGAGAGATACAATTCCCATATAAATAAGTTTTTATTTTAAAGACCAAAAGTTGGTTAC
255 AGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTAC
* *
11885504 -AAATGACAATCTATTTGGA-CAACATGATGCGATTTCTCGAGCATGGAATG--CTAGAAATGTT
320 AAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAA--TT
* * *
11885565 GTTCGAAGGAATGGATAGTCTTGAATACTTTAAGGAATCG
382 GCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * * * *
11885605 AAGTTGTAAAAGAACTCGTCAAAGTTTGATGGGTTCAAATGTTTGTCCAAGAACGAGGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGA------C-AA-GTTCGTCCAAGAACCAAGAGAGATA
* * * *
11885670 CAATTCTCACGAAAATATGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * * * * * *
11885735 TGGACCAAATGAAGCAATTT-TCTGTGCATGGGATTTTCGGGAAATGTCTTGAAGGAAAGGATCG
123 TGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTC-GAAAATG-CTCGAAGGAATGGATCG
* ** ** *
11885799 TGTTGAATACTTTAAACAACAAAAAGTTACAAAAGAACTCGTAAAAGTTTGAC--G-----AGTT
185 TCTTGAATACTTTAAGGAAC-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTT
* * *
11885857 CGTCCAAGAACCATGAGAGATACAATTCTCATGTAAATAAG-TTTTAACTCAAAGACCAAAAGTT
249 CGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* * **
11885921 GTTTACAAAATGACAAACTCTTTGGACCAAATAATATGATTTC-CAGAGCATGGAATGTTC-AGG
314 GTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGA-G
* *
11885984 AAATTGCTCGAAGAAATGGATCGTCTTGAATACTATAAGGAACCG
377 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11886029 AAGTTAT-AAAGAACTAGTAAAAATTTGACAAGTTTGAAAGTTCGTCCAAGAACCAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATA
* * ** *
11886093 AAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
58 CAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * * * *
11886158 TGGACCAAATCATGCGATTTCTTGAGCATGGAATGTTTGAAAAATAACTTGAAGGAATGGATTGT
123 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCG-AAAAT-GCTCGAAGGAATGGATCGT
** * * * * *
11886223 CGGGAATACTTTAAGGTAGCGAAATTATAAAAGAAGTCATAAAAGTTTG---A---C-AAGTTCG
186 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCG
* * * * *
11886281 TCCAAGAA-CAAGGAGAGATACAAGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTG
251 TCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * * * *
11886345 GTTA-AAAATGACAAATTATTTGGTCCAAATGATGGGATTTC-CTGAGCATGGAGTGCTCG-GTA
315 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGAG-A
* * * * * *
11886407 AATAGCTCGATGGAAAGGACCATCTTGAATACTTTAAGGAATCG
378 AATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * *
11886451 AAGCTATAAAAGAACTCGTAAAAGTGTGACGAGTTCGAATGTTTGTCCAAGAA-CAAGGAGAGAT
1 AAGTTATAAAAGAACTCGTAAAAGT-T--TGA---C-AA-GTTCGTCCAAGAACCAA-GAGAGAT
* * * * *
11886515 ACAATTCTCACGAAAATAAGTTTTTAATTCAATGAACAAAAGTTGTTTACAAAATGATAAACTAT
57 ACAATTCTCTCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT
* * * * * *
11886580 TTGGACCAAATAAAGCGATTT-TCTATGCTTGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATC
122 TTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTTC-GAAAATG-CTCGAAGGAATGGATC
* * *
11886644 GTGTTGAATACTTTAAGGAACAGAAGTTATAAAAGAACTTGTAAAAGTTTGACAAG-----A--T
184 GTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTT
* *
11886702 CGT-CAGAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTCAATTCAAAGACCAAAAGT
249 CGTCCA-AGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
* * * * *
11886766 TGTTTACAAAATGAGAAGCTATTTGGACCAAATTAAGCGATTT-TCTGTGCATGGAATGTTCG-G
313 TGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGAG
* * **
11886829 --A-------AAGG-AT-CAT-G--TTGAATACTTTAAGCAAAGAG
377 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG-GAACCG
* ***
11886861 AAGTTATAAAAGAACTCGTAAAAAGTTTGACAGGTTCGTCCAAGAACCACTTGAGATACAACTT-
1 AAGTTATAAAAGAACTCGT-AAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAA-TTC
* *
11886925 T-TACGTAACTAAGTTTTTAATTTAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAC
64 TCT-CGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAC
* * * * * *
11886989 AAAATTATGCGATTTC-CCATGCATGGAATGTTTGAGAAATGTCTCGAAGGAAGGGATTGTCTTG
128 CAAATGATGCGATTTCTCGA-GCATGGAATGTTCGA-AAATG-CTCGAAGGAATGGATCGTCTTG
* * * * **
11887053 AATA-TTATAAGGGACAGAAGTTATAAATAAAAGAACTTGTAAAAATTTGACAAGTTTGGAAGTT
190 AATACTT-TAAGGAACCGAAG-T-T--ATAAAAGAACTCGTAAAAGTTTGACAAG-TTCAAAGTT
* * * *
11887117 CGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTATTTAATTCGAAGACCAAAATTT
249 CGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* * * *
11887182 GTTTACAAAATTACAAACTATTTGGACCAAATAATGTGATTTCTCGAGCATGGAATGTTCGAAAA
314 GTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAA
*
11887247 ATAGCTCGAAGGAATGGATCGT-TGTGAATACTTTAAGGAACCG
379 ATTGCTCGAAGGAATGGATCGTCT-TGAATACTTTAAGGAACCG
* * * *
11887290 TAGTTATAAAAGAAGTCATAAAAGTTTGACAAGTTCGTCCAAGAA-CAAGGAGAGACACAATTCT
1 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCT
* * * * *
11887354 CAT-GTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTGGTCC
65 C-TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACC
*
11887417 AAATGATACGATTTCTCGAGCATGGAATG
129 AAATGATGCGATTTCTCGAGCATGGAATG
11887446 CTCGGTAAAA
Statistics
Matches: 15341, Mismatches: 2382, Indels: 1969
0.78 0.12 0.10
Matches are distributed among these distances:
392 1 0.00
393 110 0.01
394 6 0.00
395 112 0.01
396 5 0.00
397 42 0.00
398 35 0.00
399 50 0.00
400 19 0.00
401 53 0.00
402 15 0.00
403 149 0.01
404 62 0.00
405 81 0.01
406 289 0.02
407 36 0.00
408 73 0.00
409 186 0.01
410 226 0.01
411 64 0.00
412 79 0.01
413 320 0.02
414 508 0.03
415 652 0.04
416 252 0.02
417 447 0.03
418 450 0.03
419 380 0.02
420 413 0.03
421 1186 0.08
422 2462 0.16
423 1941 0.13
424 1052 0.07
425 386 0.03
426 339 0.02
427 169 0.01
428 304 0.02
429 536 0.03
430 778 0.05
431 269 0.02
432 132 0.01
433 5 0.00
434 1 0.00
435 15 0.00
436 27 0.00
437 12 0.00
438 41 0.00
439 1 0.00
440 1 0.00
441 1 0.00
442 2 0.00
443 5 0.00
444 2 0.00
446 36 0.00
447 10 0.00
448 5 0.00
449 7 0.00
450 8 0.00
451 7 0.00
452 5 0.00
453 7 0.00
454 155 0.01
455 16 0.00
456 85 0.01
457 42 0.00
458 41 0.00
459 19 0.00
460 4 0.00
461 68 0.00
462 44 0.00
ACGTcount: A:0.39, C:0.14, G:0.19, T:0.28
Consensus pattern (421 bp):
AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTC
TCGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA
ATGATGCGATTTCTCGAGCATGGAATGTTCGAAAATGCTCGAAGGAATGGATCGTCTTGAATACT
TTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAGTTCGTCCAAGAACC
AAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATG
ACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATTGCTCGAAGG
AATGGATCGTCTTGAATACTTTAAGGAACCG
Found at i:11869488 original size:208 final size:208
Alignment explanation
Indices: 11868381--11894290 Score: 17103
Period size: 207 Copynumber: 122.4 Consensus size: 208
11868371 GAGAGATTAT
*
11868381 ATTCTCACGTAAATAA-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * *
11868445 GACCAAATGATGTGACTTCCCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * * *
11868510 TGAATACTTTAAGGAATCGAAGTTATAAAAGAGCTCATAAAAGCTTGAGAAGTTCGTCCAAGAAC
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAAC
*
11868575 C-AGAAGAGATTCA
196 CAAG-AGAGATACA
* * * *
11868588 ATTCTCACATAAATAAGTTTTTAATTCAAAGATCAATAGTAGTTTA-AAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * *
11868652 GACCAAATGATACGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATTGTCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * *
11868717 TGAATATTTTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCGTCCTAA-AA
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCC-AAGAA
*
11868781 CGAAGAGAGATACA
195 CCAAGAGAGATACA
* * * *
11868795 ATTCTCTCCT-AATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTCCAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * *
11868859 GACCAAATGATGCGATTTCTCGAGCAAGAAATGTTC--GAAATATAGCTTGAAGGAATA-GATCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT--CTCGAAGGAA-AGGATCG
* * **
11868921 TATTGAATACTTTAAGGAACCGAAGTTATAAATGAACTCCAAAAAGTTTGACAAGTTCCAAAGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTT
11868986 CGTCCAAGAACCAAGAGAGATACA
185 CGTCCAAGAACCAAGAGAGATACA
* * * * * *
11869010 ATTCTCATGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATTTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * ** *** * *
11869074 GACCAAATGATGCAATTTCACGAGCCTGGAATACTCAAAAAAT-TGCTCGAAGGAATGGATCATC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAAGGATCGTC
* * *
11869138 TTGAACACTTTAAGGAACCGAAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCGGAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A-----GAAGTTCG
* * * *
11869203 TCAAAGAACTAGGAGAGATTA-T
187 TCCAAGAACCAAGAGAGA-TACA
* *
11869225 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTCACAAAATGACAAACAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * *
11869290 GACCAAATAATGCGACTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATTGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * *
11869355 TGAATACTATAAGGAATCGAAGTTATAAAAGAGCTCGTAAAAGTTTGAGAAGTTCGTCCAAGAAC
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAAC
11869420 CAAGAGAGATACA
196 CAAGAGAGATACA
* * *
11869433 ATTCTCACATAAATAAGTTTTTAATTCAAAGACCAATAGTAGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11869498 GACCAAATGATACGATTTCTCAAGCACGGAATGTTCGGCAAATGTCTCGAAGGAAAGGATCATCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
**
11869563 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACCAGTTCGTCCTAA-AA
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCC-AAGAA
* *
11869627 CGAAGAGAGATGCA
195 CCAAGAGAGATACA
* * * * *
11869641 ATTCTCATGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** ** *
11869705 GACCAAATGATGCAATTTCTCGAGCCTGGAATACTCGAAAAAT-TGCTCGAAGGAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAAGGATCGTC
* * *
11869769 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTTGT-AAGGTTTGACAAGTTCAGAAGTTTG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTC----G--T-
* * * *
11869833 TCAATGAACTAGGAGAGATTA-T
188 CCAA-GAACCAAGAGAGA-TACA
* * *
11869855 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAGAACCAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* *
11869920 GACCAAATGATGCGACTTC-C-CGCATGGAATGTTCGGGAAATGTCTCGAA-GAAA-GATCGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * * *
11869981 TGAATACTTTAAGGAACTGAAGTTATAAAGGAACTTGAAAAAGTTTGACAAGTTCCAAAGTTCGT
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCGT
11870046 CCAAGAACCAAGAGAGATACA
188 CCAAGAACCAAGAGAGATACA
* * * * *
11870067 ATTCTCAAGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * ** ** **
11870131 GACCAAATGATGCAATTTCTTGAGCACGGAATACTC-AAAAAT-TCTCGAAGGAATTGATCGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * * *
11870194 TGAATACTTTAAGGAATCGAAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCAGAAGTTTGT
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT-----G---AGAAGTTCGT
* * * *
11870259 CAAAGAACTAGGAGAGATTA-T
188 CCAAGAACCAAGAGAGA-TACA
* * *
11870280 ATTCTCACGTAAATAACTTTTTAATTCAAAGACCAAAAGTTGTTTAC-AAATGAGAAGACCAATT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA-A-CTATT
* * * *
11870344 TGGACCAAATGATGCGACTTCTCGAGCGTGGAATGTTCGGGAAATGTCTCGAAGAAAACGATCGT
64 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGT
* * *
11870409 CTTGAATACTTTAAGGAACTGAAGTTATAAAGGAACTCGAAAAAGTTTGACAAGTTCCAAAGTTC
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTC
*
11870474 ATCCAAGAACCAAGAGAGATACA
186 GTCCAAGAACCAAGAGAGATACA
* * * * *
11870497 ATTCTCAAGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* ** ** * * **
11870561 GACCAAATGATGCAATTTCTCGAGCCCGGAATACTC-GAAAAT-TGCTTGAAGGAATTGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAAGGATCGTC
* * *
11870624 TTGAATACTTTATGGAACCGAAGTT-TATAAA-AACTTGTAAAGGTTTGACAAGTTCGGAAGTTC
130 TTGAATACTTTAAGGAACCGAAGTTATA-AAAGAACTCGTAAAAGTTTG---A-----GAAGTTC
* * *
11870687 GTCAAAGAA-CTAG-GAGATATTA
186 GTCCAAGAACCAAGAGAGATA-CA
* * *
11870709 TATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTTTTTGCAAAATGACAAACAATTT
1 -ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * *
11870774 GGACCAAATGACGCGACTTCCCGAGCATGGAATGTTCGGGACATGTCTCGAAGGAAAGGATCGTC
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * * *
11870839 TTGAATAGTTTAAGGAATCGAAGTTATAAAAGAGCTCGTAAAAGTTGGAGAAGTTCGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
11870904 CCAAGAGAGATACA
195 CCAAGAGAGATACA
* * * *
11870918 ATTCTCACATAAATAAGTTTTTAATTCAAAGACCAATAGTAGTTTACAAAATGACAAACTATTTA
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11870983 GAACAGATGATACGATTTCTGGAGCATGGAATGTTCGAGAAATGTCTCGAAGGAAAGGATCGTCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * * *
11871048 TGACTACTTTAACGAATCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCTAA-AA
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCC-AAGAA
**
11871112 TGAAGAGAGATACA
195 CCAAGAGAGATACA
* * * *
11871126 GTTCTCTCCT-AATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * *** * * *
11871190 GACCAAATGATGCTATTTCTCGAGCAAGAAATGTTCAAAAAATAG-CTTGAAGGAATGGATCGTA
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* * * **
11871254 TGGAATACTTTAAGGAATCGAAGTTATAAATGAACTCAAAAAAGTTTGACAAGTTCCAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCG
11871319 TCCAAG-ACCAAGAGAGATACA
187 TCCAAGAACCAAGAGAGATACA
* * * * *
11871340 ATTCTCATGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * *
11871404 GACCAAATGATGCAATTTCTCGAGCCTGAAATACTT--GAAAAT-TGCTCAAAGGAATGGATCGT
66 GACCAAATGATGCGATTTCTCGAGCATGGAAT-GTTCGGGAAATGT-CTCGAAGGAAAGGATCGT
* *
11871466 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCGAAAGTTC
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAGTTC
* * * *
11871531 GTCAAAGAACTACGAGAGATTA-T
186 GTCCAAGAACCAAGAGAGA-TACA
*
11871554 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11871619 GACCAAATAATGCGACTTCCCAAGAATGGAATGTTCGGGAAATGTCTC-ATAGGAAAGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGA-AGGAAAGGATCGTC
* * *
11871683 TTGAATTCTTTAAGG-ACTCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCCTCCAATA
130 TTGAATACTTTAAGGAAC-CGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGA
*
11871747 ACCAAAAGAGATACA
194 ACCAAGAGAGATACA
* ** *
11871762 ATTCTCTTC-T-AATAAGTTTTTAATTCAAAGACCAATGGTAGTTTACAAAATGACAAACTATTT
1 ATTCTC-ACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * *
11871825 AGACCAAATGATACGGTTTCTCGAGCATGGAATGTTCGAGAAATGTCTCGAAGGAAAGGATCGTC
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * *
11871890 GTGAATACTTTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCGTCCTAA-A
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCC-AAGA
**
11871954 ATGAAGAGAGATACA
194 ACCAAGAGAGATACA
* * * *
11871969 ATTCTCTCCT-AATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTCCAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11872033 GACCAAATGATGCGATTTCTTGAGCAAGAAATGTTC--GAAATATAGCTTGAAGGAATA-GATCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT--CTCGAAGGAA-AGGATCG
* * *
11872095 TATTGAATACTTTAAGGAACCGAAGTTATAAATGAACTCGAAAAAGTTTGACAAGTTCCAAAGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTT
11872160 CGTCCAAGAACCCAAGAGAGATACA
185 CGTCCAAGAA-CCAAGAGAGATACA
** * * * * *
11872185 ATTCTCAATTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCTATTTA
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * ** *** * *
11872249 GACCAAATGATGCAATTTCACGAGCCTGGAATACTCAAAAAAT-TGCTCGAAGGAATGGATCATC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAAGGATCGTC
* *
11872313 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCAGAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT-----G---AGAAGTTCG
* * * * *
11872378 TCAAAGAACTAGGAAAGATTA-T
187 TCCAAGAACCAAGAGAGA-TACA
* *
11872400 ATTCTCACGTAAATAAGCTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* *
11872465 GACCAAATGATGCGACTTCCCGAGCATGGAATGTTCGGGAAATGTCTC-ATAGGAAAGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGA-AGGAAAGGATCGTC
* * * *
11872529 TTGAATTCTTTAAGGAATCGAACTTAT-AAAGAGCTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
*
11872593 CCAAAAGAGATACA
195 CCAAGAGAGATACA
* * ** *
11872607 ATTCTCTTC-T-AATATGTTTTTAATTCAAAGACCAATGGTAGTTTACAAAATGACAAACTATTT
1 ATTCTC-ACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * *
11872670 AGACCAAATGATACGGTTTCTCGAGCATGGAATGTTCGGGAAATGTCTCAAAGGAAAGGATCGTC
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * * * *
11872735 GTGAATACTTTAAGTAATCGAACTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCTAA-A
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCC-AAGA
*
11872799 ACGAAGAGAGATACA
194 ACCAAGAGAGATACA
* * *
11872814 ATTCTCTCCT-AATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * *** * * *
11872878 GACCAAATGATGCGATTTCTCGAGCAAGAAATGTTCAAAAAATAG-CTTGAAGGAATGGATCGTA
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* * *
11872942 TGGAATACTTTAAGGAATCGAAGTTATAAATGAACTCG-AAACAGTTTGACAAGTTCCAAAGTTC
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAA-AGTTTG---AG-----AAGTTC
11873006 GTCCAAGAACCAAGAGAGATACA
186 GTCCAAGAACCAAGAGAGATACA
* * * * * *
11873029 ATTCTCATGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAGTGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** ** * *
11873093 GACCAAATGATGCAATTTCTCGAGCCTGGAATACTCGAAAAAT-TGCTCAAAGGAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAAGGATCGTC
* * *
11873157 TTGAATACTTAAAGGAACCG-AGTTATAAAAGAACTTGTAAAGGTTTGACAAGTTCGAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAGTTCG
* * * *
11873221 TCAAAGAACTACGAGAGATTA-T
187 TCCAAGAACCAAGAGAGA-TACA
* * *
11873243 ATTCTCACGTAAATAAGTTTTTAATCCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTAG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * *
11873308 GACCAAATGATGCGACTTCCCGAGAATGGAATGTTCGGGAAATGTCTC-ATAGGAAAGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGA-AGGAAAGGATCGTC
* * * *
11873372 TTGAATTCTTTAAGGAATCGAAGTTATAAAAGAGCTCGTAAAAGTTAGAGAAGTTCGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
*
11873437 CCAAAAGAGATACA
195 CCAAGAGAGATACA
* * * ** *
11873451 ATTCTCTTC-T-AATAAGTTCTTAATTCAAAGACTAATGGTAGTTTACAAAATGACAAACTATTT
1 ATTCTC-ACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
** * * * * *
11873514 GGACCAAATGACACGGTTTTTCGAGCACGAAATGTTCGGGAAATGTCTCAAAGGAAAGGATCGTC
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * * * * * * *
11873579 ATGAATACTTTAAGTAATCGAACTTATAAAAGAACTCGTAACAGTTTGACAAGTTCGACCTAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
**
11873644 GGAAGAGAGATACA
195 CCAAGAGAGATACA
* * * * * *
11873658 ATTCTCATGTAAATAAGTTTTTAATTCAAACACCAAAAGCTGGTTAC-AAATGACAACCAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* ** * * *
11873722 GACCAAATGATGCAATTTCTCGAGCCCGGCAACCTATTTGGTCCAAATGATGCAATTTCTCG-AG
66 GACCAAATGATGCGATTTCTCGAGCATGG-AA--TGTTCGG-------GA---AATGTCTCGAAG
*** * * * * ** * * * * ***
11873786 CCTAGAAT-G-CTCGAAAAATTGCTCGAAGGAATGGATCGTCT-T-GAA-TACT--T-TAAGGAA
118 GAAAGGATCGTCTTGAATACTT--T--AAGGAACCGA-AGT-TATAAAAGAACTCGTAAAAGTTT
** * ** **
11873843 CCGAAGTT-ATAAAAGAACTCGTAA-AG-TTTGACA
177 GAGAAGTTCGTCCAAGAAC-C--AAGAGAGAT-ACA
* * * **
11873876 AGTTCGTC-CTAGAACCAAGAGAGATGCACTTCTCACATAAATAAGTTTTTAATTCAAAGACCAA
1 A-TTC-TCAC--GTA--AATA-AG-T----TT-TTA-ATTCA-AAG------A--C------CAA
* * * * *
11873940 CAGTAGTTTACAAAATGA-CAA--ACTATTTGGACCAAATGATGCGATTTCTCGGGCATGGAATG
37 AAGTTGTTTACAAAATGACAAACTA-T-TTG-GACCAAATGATGCGATTTCTCGAGCATGGAATG
** * * ** * * *
11874002 TTCGAAAAATAGAT-T-GAATGAATGGATCACCGTGAATACTTTAAGGAACTGAAGTTATAAAGG
99 TTCGGGAAAT-G-TCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
** **
11874065 AACTAATAAAAGTCTAACAAGTTCCATAGTTCGTCCAAGAACCAAGAGAGATACA
162 AACTCGTAAAAGT-T--TGAG----A-AGTTCGTCCAAGAACCAAGAGAGATACA
** * * *
11874120 ATTCTCATATAAATAAG-TTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** * * * *
11874183 GACCAAATGATGCAATTTGTTAAGCCA-GGAATGCTT-TGAAAAT-TACTTGAAGGAATGGATCG
66 GACCAAATGATGCGATTTCTCGAG-CATGGAATG-TTCGGGAAATGT-CTCGAAGGAAAGGATCG
* ** * * * *
11874245 TCTTGAATACTTTAAGGAACCAAAGAACTCGTAAAAG--TTTG-AAAAGTTTGA-AAGTTTGACC
128 TCTTGAATACTTTAAGGAACC---GAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCC
*
11874306 AAGAACCAGGAGAGATACA
190 AAGAACCAAGAGAGATACA
* *
11874325 ATTCTCACGTAAATAAGTTTTTTAATTCAATGACAAAAAGTTGTTTACAAAATGACAAACTATTT
1 ATTCTCACGTAAATAAG-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * * ** *
11874390 GGACCAAATGAAGCAATTTCCCGTGCATGGAATGTTTAGGAAATGTCTCGAAGGAAAGGATTGTC
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * * * *
11874455 TTGAATACGTTAAGGAACCGAAGTTATAAATGAACTCATAAAAGTTTGACAAGTACGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
*
11874520 CCATGAGAGATACA
195 CCAAGAGAGATACA
* ** *
11874534 ATTCTCACGTAAATAAGTTTTTAACTCAAAGACCAAATTTTTTTTTTACAAAATGACAAACTATT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAA--AGTTGTTTACAAAATGACAAACTATT
* * *
11874599 TAGACCAAATAGTAT--GATTT-TCAGAGCATGGAATGTTCGGGAAATGTCTTGAAGGGAAGGAT
64 TGGACCAAAT-G-ATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGAT
* * ** *
11874661 CGTGTTGAATACTTTAA-AAAAAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCA
126 CGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCA
**
11874725 AGAACCATTAGAGATACA
191 AGAACCAAGAGAGATACA
* * *
11874743 ATTTTCACGTAAATAAGTTTTTAATTCAAAGACTAAAAGTTTTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * **
11874808 GACCAAATGATGCAATTTC-CCATGCGTGGAATGTTCGAGAAATGTCTCGAAGGATTGGATCGTC
66 GACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* *
11874872 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTGGAAGTTCGT
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----GAAGTTCGT
* *
11874937 ACAAGAACCAAGAGAGATATA
188 CCAAGAACCAAGAGAGATACA
* ** * *
11874958 ATTCTCACATAAATAAGGATTTAATTCGAACACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * *** * * * *
11875023 GACCAAATGATGTGATTTCTCGAGCATGGAATGCTCAAAAAAAG-CTTGAAGGAATGGATCGTCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * *
11875087 TGAATACATTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGAGATGTTCGTCCAAGAA-
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAAC
*
11875151 GAAGGAGAGATACA
196 CAA-GAGAGATACA
* ** * * * * * *
11875165 ATTCTCATGTAAATTTGCTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATTACAAACTATTTC
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * ** * *
11875229 GTCCAAATGATGCGATTTCTCGAGCAAGGAATGCTCGATAAATAG-CTCGATGGAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* *
11875293 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACGAGTTCAAATGTTTG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---GAG----AA-GTTCG
** *
11875358 TCCAAGAATGAGGAGAGATACA
187 TCCAAGAACCAAGAGAGATACA
* * * * *
11875380 TTTCTCACGAAAATAAGTTTTTACTTCAATGACCGAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * *
11875445 GACCAAATGAAGCGATTTGCT-GTGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGTATCGTG
66 GACCAAATGATGCGATTT-CTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* *** *
11875509 TTGAATACTTTATGGAGTAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
*
11875574 CCATGAGAGATACA
195 CCAAGAGAGATACA
*
11875588 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-AAAGTTGTTTACAAAATGACAAACAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * *
11875652 GACCAAATGAAGCTATTT-TCTGTGCATGG-ATGTTCGAGAAATGTCTCAAAGGAAAGGATCATG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
** * *
11875715 TTGAATACTTTAAGGAACAAAATTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
** **
11875780 CCATTAGAGATTTTTA
195 CCA--AGAGAGATACA
* * ** * **
11875796 ATTC-AAAG-ACCAA-AAGTTGTTT-A--CAAAATGA-CAAACTA-TT-TGGACCAAAT-A-ATG
1 ATTCTCACGTA--AATAAGTT-TTTAATTC-AAA-GACCAAA--AGTTGTTTACAAAATGACAAA
* * * * *
11875850 CGATTT---CC-CATGCAAT--GAATGCTCGAG-A---AATGTCTCGAAGGAATGGATAGTCTTG
59 CTATTTGGACCAAATG--ATGCGATTTCTCGAGCATGGAATGT-TCG--GGAA---AT-GTCTCG
** * * ** ** ** ** * * *
11875905 AATACTATAAGGAAC--C---AA-AGTTATAATTAAAAGACCTCGT-AAA-AATTTG-ACAAGTT
115 -A-AGGA-AAGGATCGTCTTGAATACTT-TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTT
* *
11875961 TG-GAAG-TCATCCAAGAACCAAGGGAGATACA
176 TGAGAAGTTCGTCCAAGAACCAAGAGAGATACA
** * *
11875992 ATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATTACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11876057 GACCAAATGATGC-ATTTTCTCGAGCATGTAATGTTCAGAAAATAG-ATCGAAGGAATGGATCGT
66 GACCAAATGATGCGA-TTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGT
* * * *
11876120 CGTGAATACTTTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCTTCCAAGA
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGA
11876185 A-CAAGGAGAGATACA
194 ACCAA-GAGAGATACA
* * * ** *
11876200 ATTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAACCTGGTTA-AAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * * *
11876264 GTCGAAATGATGGGATTTCCCGAGCATGGAATGCTCGGTAAATAG-CTCGATGGAAAGGATCATC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
*
11876328 TTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCG
11876392 TCCAAGAACCAAGAGAGATACA
187 TCCAAGAACCAAGAGAGATACA
* * * * *
11876414 ATTC-C-CGTATAAATAAGTTTTTATTTTAAAGACCAAAAGTTGGTTAC-AAATGGCAACCTATT
1 ATTCTCACG--TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * *** *
11876476 TGGA-CAACATGATGCGATTTCTCGAGAATGGAATGCT-AAAAAAGTTGT-TCGAAGGAATGGAT
64 TGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAA--TGTCTCGAAGGAAAGGAT
* *
11876538 AGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCATAAAAGTTTGACGAGTTCGAATG
126 CGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---GA----GAA-G
* ** *
11876603 TTTGTCCAAGAATGAGGAGAGATACA
183 TTCGTCCAAGAACCAAGAGAGATACA
* * * * *
11876629 ATTCTCATGAAAATATGTTTTTAATTCAATGACCAAAATTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * * * *
11876694 GACCAAATGAAGCAATTTTTTGTGCATGGAATTTTTGGGAAATGTCTTGAAGGAAAGGATCGTGT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
** * *
11876759 TGAATACTTTAAACAACAGAAGTTACAAAAGAACTCGTAAAAGTTTGACG-AGTTCGTCCAAGAA
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA-GAAGTTCGTCCAAGAA
*
11876823 CCATGAGAGATACA
195 CCAAGAGAGATACA
* * * *
11876837 ATTCTCATGTAAATAAGTTTTTAACTCAAAGACCAAAAGTTGATTACAAAATGACAAACTCTTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* ** * **
11876902 GACCAAATAATATGATTTCTAGAGCATGGAATGTTCCAGAAAT-TGCTCGAA-GAAATGGATCGT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAA-GGATCGT
* * *
11876965 CTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTAGTAAAAATTTGACAAGTTTGAAAGTTC
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAGTTC
11877030 GTCCAAGAACCAAGAGAGATACA
186 GTCCAAGAACCAAGAGAGATACA
** *
11877053 ATTCTCACGTAAATAAGGATTTAATTCGAAGACC-AAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** ** * * * *
11877117 GACCAAATCATGCGATTTCTTGAGCATGGAATGTTCGAAAAATAACTTGAAGGAATGGATTGTCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * * * * * * * *
11877182 CGAATACTTTAAGGTAGCAAAATTATAAAAGAAGTCATAAAAGCTTT-ACAAGTTCATCCAAGAA
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TTTGAGAAGTTCGTCCAAGAA
11877246 -CAAGGAGAGATACA
195 CCAA-GAGAGATACA
* * * * ** * *
11877260 AGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAACCTGGTTA-AAAATGACAAAATATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11877324 GTCCAAATGATG-GATTTCCCGAGCATGGAATGCTCGGTAAATGGCTCGATGGAAAGGATCGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
11877388 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCGT
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCGT
11877452 CCAAGAACCAAGAGAGATACA
188 CCAAGAACCAAGAGAGATACA
* ** * * * * *
11877473 ATTCCCATATAAATAAGTTTTTATTTTAAAGACTAAAAGTTGGTTAC-AAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11877537 GA-CAACATGATGCGATTTCTCGAGCATGGAATGCT-AGAAAAGTTGT-TCGAAGGAATGGATAG
66 GACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAA--TGTCTCGAAGGAAAGGATCG
**
11877599 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTTATAAAAGTTTGACGGGTTTGAATGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA-------GAA-GTT
* * * *
11877664 TGTCCAAGAACGAGGAGAGATACG
185 CGTCCAAGAACCAAGAGAGATACA
* * * *
11877688 ATTCTCAAGAAAATATGTTTTTAATT-------C--AA--TG---ACCAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * *
11877739 GACCAAATGAAGCAATTT-TCTGTGCATGGAATTTTCGAGAAATGTCTTGAAGGAAAGGATCGTG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
** * * *
11877803 TTGAATACTTTAAACAACTGAAGTTACAAAAGAACTCGTAAAAGTTTGACG-AGTTCATCCAAGA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA-GAAGTTCGTCCAAGA
*
11877867 ACCATGAGAGATACA
194 ACCAAGAGAGATACA
* ** * * *
11877882 ATTCTCATGTAAATAAGTTTTTAACACAAAGACCAAAAGTTGTTCACAAAATGAGAAACTCTTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* ** * *
11877947 GACCAAATAATATGATTTC-CAGAGCATGGAATGTTCAGGAAAT-TGCTTGAA-GAAATGGATCG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAA-GGATCG
* * * * *
11878009 TGTTGAATACTATATGGAACCGAAGTTATAAAAGAACTAGTAAAAATTTGACAAGTTTGAAAGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAGTT
11878074 CGTCCAAGAACCAAGAGAGATACA
185 CGTCCAAGAACCAAGAGAGATACA
* ** *
11878098 ATTCTCACATAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * ** * * * *
11878163 GACCAAATCATGTGATTTCTTGAGCATGGAATGTTCGGAAAATAACTTGAAGGAATGGATTGTCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * ** * * * *
11878228 CGAATACTTTAAGGTAGGGAAATTATAAAAGAAGTCATAAAAGTTTGACAAG-TCTGTCCAAGAA
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTC-GTCCAAGAA
*
11878292 -TAAGGAGAGATACA
195 CCAA-GAGAGATACA
* * * * * *
11878306 AGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * ** *
11878370 GTCCAAATGATGGGATTTC-CTGAGCATGGAAATGCTCGATAAATG-CTCGATGGAAAGGATCGT
66 GACCAAATGATGCGATTTCTC-GAGCATGG-AATGTTCGGGAAATGTCTCGAAGGAAAGGATCGT
*
11878433 CTTGAATACTTTAAGGAACCAAAGTTAT-AAA-AACTCGTAAAAGTTTGACAAGTTTCGTAAGTT
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A-----G-AAGTT
* * * *
11878496 CGTCAAAGAACTAGGAGAGATA-T
185 CGTCCAAGAACCAAGAGAGATACA
** * * * *
11878519 ATTCTCAC---AATTTG-TTTTAATTTAAAGACCAAAAGTTGTTTATAAAATGACAAACAATTTC
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * *
11878580 GACCAAATGATGCAACTTCCCGAGCATGGAATGTTCGAGAAATGTCTCGAAGGAAAGGATCGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
** *
11878645 TGAATACTTT-AGGAATTG-A-TTATAAAAAGAGCTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
131 TGAATACTTTAAGGAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
11878707 CCAAGAGAGATACA
195 CCAAGAGAGATACA
* * *
11878721 ATTCTCACATAAATAAAGTTTTTAATTCAAAGACCAATAGTAGTTTACAAAATGAC-AACTATTT
1 ATTCTCACGTAAAT-AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
*
11878785 GGGACCAAATGATACGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTC---------GATCG-
65 -GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGT
* * * * *
11878840 --TGAATGCTTTAAGGAACTGAAGTTATAAAAG-ACTCATAAAAGTTTGACAAGTTCGTCCTAGA
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGA
11878902 ACCAAGAGAGATACA
194 ACCAAGAGAGATACA
* * *
11878917 ATTCTCTCCT-AATAAGTTTTTAATTC-AAGACC-AAAGTAGTTTAC-AAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * ** * * *
11878978 GACCCAATGATATCGATTTCTCGAGCATGAAATGTGTTGAAAAATAGTCTTGAAGGAATGGATTG
66 GACCAAATGAT-GCGATTTCTCGAGCATGGAATGT-TCGGGAAAT-GTCTCGAAGGAAAGGATCG
* * *
11879043 TATTGAATACTTTAA-GAACTGAAGTTATAAATGAACTCG-AAAAGTTTGACAAGTTCCAAAGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTT
* *
11879106 CGTCCAAGAACTCATAAAAGTTGATA-A
185 CGTCCAAGAAC-C--AAGAG-AGATACA
* * ** ** *** *
11879133 GTTTCGTC-C-TAGAACCAAGAGAGATACAATTC--TCTCCTAATAAGTTTTTAATTCAAAGACC
1 -ATTC-TCACGTA-AA--TA-AG-TTTTTAATTCAAAGACC-AA-AAG-TTGT--TT-----A-C
* * * * *
11879194 AAAAGTAGTTCACAAATGACAAAAAATTTGACAAAATGATGCG-TCTTCTTGAGCAT-GAATGTT
48 AAAA-T-G---AC-AA--AC---TATTTGGACCAAATGATGCGAT-TTCTCGAGCATGGAATG-T
* * * * *
11879257 TC-GGAAATGTCTCGAAGGAAAGGA-CGTCTTGAATACTTTATGGTACTGAAGTTTTATAAGAAC
100 TCGGGAAATGTCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
11879320 TCGTAAAA-TTTGACAAGTTCCCAAGTTCGTCCAAGAACCAAGAGAGATACA
165 TCGTAAAAGTTTG---AG-----AAGTTCGTCCAAGAACCAAGAGAGATACA
* ** * * * *
11879371 GTTCTCATATAAATAAGTTTTTTAATTGAATGACCAAAAGCTGGTTAC-AAATGAC-AACATATT
1 ATTCTCACGTAAATAAG-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAAC-TATT
* * * * *
11879434 TGGACAAAATGATGAGATTTCTCGAGCATGGGAATGCTC-GGAATAT-TGCTCAAAGGAATGGAT
64 TGGACCAAATGATGCGATTTCTCGAGCAT-GGAATGTTCGGGAA-ATGT-CTCGAAGGAAAGGAT
* * * *
11879497 AGTCTTGAATACATTAAGG-ACTGAAGTTATAAAA-AACTCGTAGAAGTTTGACAAGTTCGAAAG
126 CGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAG
* * *
11879560 TTCGTCAAAGAACCAGGAGAGATTA-T
183 TTCGTCCAAGAACCAAGAGAGA-TACA
* * * *
11879586 ATTCTCATGTAAATAAGTTTTTAATTCATAGACCAAAAGTTGTTTACGAAA-CACAAA-TAATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACT-ATTT
* * * **
11879649 GGACCAAATGATGCGAATTCCCAAGCATGGAATGTTCAAGAAATGTCTCGAAGG-AAGGATCGTC
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * *
11879713 TTGAATACTTTATGGAACCGAAG-T-TAAAAGAACTCGTAAAAATTTGACAAGTTCGTCCTAA-A
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCC-AAGA
11879775 ACC-AGAGAGATACA
194 ACCAAGAGAGATACA
* * * *
11879789 ATTCTTACATAAATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTTTCAAAATGACAAACTATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTT
* *** * *
11879854 GGACCAAATGATGCAATTTCTCGAGCATGGAATGTTCAAAAAATAG-CTTGAA-GAATGGATCGT
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGT
* * * *
11879917 CTTGAATACTTTAAGGAACTGAAGTTAT-AAAGAACTCGTAACAGTCTGACAAGTTCCAAAGTTC
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTT-C---G-T-
*
11879981 ACCTACGAACCAAGAGAGATACA
188 -CC-AAGAACCAAGAGAGATACA
* * ** *
11880004 ATTCTCATGTAAATAGGTTTTTAATTCAAAGACCAAAAGCAAG-TTAC-AAATGACAACCTATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTT
* * * * ** * * *
11880067 GGACCAAATGATGAGATTTCTCGAGCCTAGAATGCTCGAAAAAT-TGCTCGAAGGAATGAATCAT
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAAGGATCGT
* * *
11880131 CTTGAATGCTTTAAGGAACCGAAGTTATAAAAGAACTCGTAGAAGTTTGACAAGTTCGAAAGTTT
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAGTTC
* *
11880196 GTCCAAGAACGAGGAGAGATACA
186 GTCCAAGAACCAAGAGAGATACA
*
11880219 ATTCTCACGTAAATAAGTTTTTAATT-AAATAACCAAAAGTTGTTTACAAAATGACAAACTATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAA-GACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * *
11880283 GGAGCAAATGAAGCGATTTC-CCATGCATGGAATGTTTGGGAAATGTCTCGAAGGAAAGGATCGT
65 GGACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGT
* * * * *
11880347 GTTGAATAC-TGAAGGAATC-AAGTTATAAAAGAAACTCGTAAAAGTTTGACAAGTTTGTCCAAG
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAG-AACTCGTAAAAGTTTGAGAAGTTCGTCCAAG
*
11880410 AACCATGAGAGATACA
193 AACCAAGAGAGATACA
*
11880426 ATTTTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11880491 GACCGAATAATGTGATTTGC-AGAG-ATGGAATGTTCGGGAAATTGT-TCAAAGGAAAGGATCGT
66 GACCAAATGATGCGATTT-CTCGAGCATGGAATGTTCGGGAAA-TGTCTCGAAGGAAAGGATCGT
* * * * * *
11880553 CCTGAATACTTTAAGAAATCGAAGTTATAAAAGAACTTGTAAAAATTTGACAAATTTGGAAGTTT
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG----A----GAAGTTC
* *
11880618 GTGCAATAACCAAGAGAGATACA
186 GTCCAAGAACCAAGAGAGATACA
* * ** * ** *
11880641 ATTCTCATGTATATAAGGATTTAATTCGAAGACCAAAAGTTGAATACAAAATGACAAATTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
** * * *
11880706 GACCAAATGATGATATTTCTCAAGCATAGAATGTTCGGGAAATGTCTCAAAGGAAAGGATCGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* ** *
11880771 TGAATACTTTAAGGAA-CGAAATTA-AAAAGAACTCGTAAAAGTTTGACCAGTTCGTCCTAGAAC
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAAC
*
11880834 CAAGAGAGATGCA
196 CAAGAGAGATACA
* * * *
11880847 CTTCTCACATAAATAAGTTTTTAATTCAAAGACCAACAGTAGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* ** * * **
11880912 GACCAAATGATGCGATTTCTCGGGCATGGAATGTTCGAAAAATAGAT-T-GAATGAATGGATCAC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-G-TCTCGAAGGAAAGGATCGT
* * * * **
11880975 CGTGAATACTTTAAGGAACTGAAGTT-TAAAGGAACTCATAAAAGTCTAACAAGTTCCATAGTTC
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGT-T--TGAG----A-AGTTC
11881039 GTCCAAGAACC-A-AGAGATACA
186 GTCCAAGAACCAAGAGAGATACA
** * * *
11881060 A-TCTCATATAAATAAG-TTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGAC--CCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11881120 GACCAAATGATGCAATTGGT-TAGTGAATGCCTTGAATGCTT---GACAAT-TACTTGAAGGAAT
66 GACCAAATGATGCGATT--TCT--CG-A-GCATGGAATG-TTCGGGA-AATGT-CTCGAAGGAAA
* ** * * *
11881180 GGATCGTCTTGAATACTTTAAGGAACCAAAGAACTCGTAAAAG--TTTG-ACAAGTTTGA-AAGT
122 GGATCGTCTTGAATACTTTAAGGAACC---GAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGT
* * *
11881241 TTGACCAAGAACCAGGAGAGATACA
184 TCGTCCAAGAACCAAGAGAGATACA
* *
11881266 ATTCTCACGTAAATAAGTTTTTAATTCAATGACAAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * ** *
11881331 GACCAAATGAAGCAATTTCCCGTGCATGGAATGTTTAGGAAATGTCTCGAAGGAAA-GATTGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * * *
11881395 TGAATA-TGTTAAGGAACCGAAGTTATAAATGAACTCATAAAAGTTTGACAAGTACGTCCAAGAA
131 TGAATACT-TTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
*
11881459 CCATGAGAGATACA
195 CCAAGAGAGATACA
* * * *
11881473 ATTCTCACGTAAAT-AGTTTTTAACTCAAAGACCAAAATTTTTTTACAAAATGACAAACTATTTA
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* *
11881537 GACCAAATAGTAT--GATTTC-CAGAGCATGGAATGTTCGGGAAATGTCTTGAAGGGAAGGATCG
66 GACCAAAT-G-ATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCG
* * ** *
11881599 TGTTGAATACTTTAA-AAAAAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAG
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAG
** *
11881663 AACCATTAGAGATGCA
193 AACCAAGAGAGATACA
* * *
11881679 ATTGTCACGTAAATAAGTTTTTAATTCAAAGACTAAAAGTTTTTTACAAAATGAC-AACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * **
11881743 GACCAAATGATGCAATTTC-CCATGCGTGGAATGTTCGAGAAATGTCTCGAAGGATTGGATCGTC
66 GACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* *
11881807 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTTGGAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A-----GAAGTTCG
* *
11881872 TACAAGAACCAAGAGAGATATA
187 TCCAAGAACCAAGAGAGATACA
* ** * *
11881894 ATTCTCACATAAATAAGGATTTAATTCGAACACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * *** * *
11881959 GACCAAATGATGTGATTTCCCGAGCATGGAATGCTCAAAAAATAG-CTTGAAGGAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* * * *
11882023 GTGAATACATTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGAGATGTTCGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
*
11882088 -GAAGGAGAGATACA
195 CCAA-GAGAGATACA
* ** * * * * *
11882102 ATTCTCATGTAAATTTGCTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** * **
11882166 GTCCAAATGATGCGATTTCTCGAGCATGGAATGCTCGATAAATAG-CTCGATGGAATTGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* *
11882230 TTGAATACTTTAAGGAACCAAAGTTAT-AAAGAACTCGTAAAAGTTTGACGAGTTCGAATGTTTG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---GA----GAA-GTTCG
* *
11882294 TCCAAGAACGAGGAGAGATACA
187 TCCAAGAACCAAGAGAGATACA
* * * * *
11882316 TTTCTCACGAAAATAAGTTTTTACTTCAATGACCGAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* *
11882381 GACCAAATGAAGCGATTTGCT--ATGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGTATCGT
66 GACCAAATGATGCGATTT-CTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGT
* * *** *
11882444 GTTGAATACTTTATGGAGTAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGA
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGA
*
11882509 ACCATGAGAGATACA
194 ACCAAGAGAGATACA
*
11882524 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11882589 GACCAAATGAAGCTATTT-TCTGTGCATGGAATGTTCGAGAAATGTCTCGAAGGAAAGGATCATG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
** * *
11882653 TTGAATACTTTAAGGAACAAAATTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
** **
11882718 CCATTAGAGATTTTTA
195 CCA--AGAGAGATACA
* * ** * **
11882734 ATTC-AAAG-ACCAA-AAGTTGTTT-A--CAAAATGA-CAAACTA-TT-TGGACCAAAT-A-ATG
1 ATTCTCACGTA--AATAAGTT-TTTAATTC-AAA-GACCAAA--AGTTGTTTACAAAATGACAAA
* * * * *
11882788 CGATTT---CC-CATGCAAT--GAATGCTCGAG-A---AATGTCTCGAAGGAATGGATAGTCTTG
59 CTATTTGGACCAAATG--ATGCGATTTCTCGAGCATGGAATGT-TCG--GGAA---AT-GTCTCG
** * * ** ** ** ** * * *
11882843 AATACTATAAGGAAC--C---AA-AGTTATAATTAAAAGACCTCGT-AAA-AATTTG-ACAAGTT
115 -A-AGGA-AAGGATCGTCTTGAATACTT-TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTT
*
11882899 TG-GAAG-TCATCCAAGAACCAAGAGAGATACA
176 TGAGAAGTTCGTCCAAGAACCAAGAGAGATACA
** * *
11882930 ATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATTACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11882995 GACCAAATGATGC-ATTTTCTCGAGCATGTAATGTTCAGAAAATAG-ATCGAAGGAATGGATCGT
66 GACCAAATGATGCGA-TTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGT
* * * *
11883058 CGTGAATACTTTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCTTCCAAGA
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGA
11883123 A-CAAGGAGAGATACA
194 ACCAA-GAGAGATACA
* * * ** *
11883138 ATTCTCATGTAAATTAG-TTTTAATTCAACGACCAAAACCTGGTTA-AAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * * * *
11883201 GTCGAAATGATGGGATTTCCCAAGCATGGAATGCTCGGCAAATAG-CTCGATGGAAAGGATCATC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
*
11883265 TTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCG
11883329 TCCAAGAACCAAGAGAGATACA
187 TCCAAGAACCAAGAGAGATACA
* * * *
11883351 ATTC-C-CGTATAAATAAGTTTTTATTTTAAAGACCAAAAGTTGGTTAC-AAATGACAACCTATT
1 ATTCTCACG--TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* *** * *
11883413 TGGA-CAACATGATGCGATTTCTCGAGAATGGAA---TCTAAAAATGTTGTTCGAAGGAATGGAT
64 TGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATG-T-CTCGAAGGAAAGGAT
* *
11883474 AGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTTGTAAAAGTTTGACGAGTTCGAATG
126 CGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---GA----GAA-G
* ** *
11883539 TTTGTCCAAGAATGAGGAGAGATACA
183 TTCGTCCAAGAACCAAGAGAGATACA
* * *
11883565 ATTCTCACGAAAATATGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * * *
11883630 GACCAAATGAAGCAATTTTTCTGTGCATGGAATTTTTGGGAAATGTCTTGAAGGAAAGGATCGTG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
** * *
11883695 TTGAATACTTTAAACAACAGAAGTTACAAAAGAACTCGTAAAAGTTTGACG-AGTTCGTCCAAGA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA-GAAGTTCGTCCAAGA
*
11883759 ACCATGAGAGATACA
194 ACCAAGAGAGATACA
* ** * *
11883774 ATTCTCATGTAAATAAGTTTTTAGCTCAAAGACCAAAAGTTGATTACAAAATGACAAACTCTTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* ** * *
11883839 GACCAAATAATATGATTTCTAGAGCATGGAATGTTCCGGAAAT-TGCTCGAA-GAAATGGATCGT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAA-GGATCGT
* * *
11883902 CTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTAGTAAAAATTTGACAAGTTTGAAAGTTC
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAGTTC
11883967 GTCCAAGAACCAAGAGAGATACA
186 GTCCAAGAACCAAGAGAGATACA
** *
11883990 ATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* *** * ** * * * *
11884055 GACCAAATCATGCGATTTCTTTTGCATGGAATGTTC-GAAAATAACTTGAAGGAATGGATTGTCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * * * * * * * *
11884119 CGAATACTTTAAGGTAGCAAAATTATAAAAGAAGTCATAAAAGCTTT-ACAAGTTCATCCAAGAA
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TTTGAGAAGTTCGTCCAAGAA
11884183 -CAAGGAGAGATACA
195 CCAA-GAGAGATACA
* * * * ** * *
11884197 AGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAACCTGGTTA-AAAATGACAAAATATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11884261 GTCCAAATGATGGGATTTCCCGAGCATGGAATGCTCGGTAAATGGCTC-AATGGAAAGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAA-GGAAAGGATCGTC
11884325 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCG
11884389 TCCAAGAACCAAGAGAGATACA
187 TCCAAGAACCAAGAGAGATACA
* ** * * * * *
11884411 ATTCCCATATAAATAAGTTTTTATTTTAAAGACTAAAAGTTGGTTAC-AAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11884475 GA-CAACATGATGCGATTTCTCGAGCATGGAATGCT-AGAAAAGTTGT-TCGAAGGAATGGATAG
66 GACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAA--TGTCTCGAAGGAAAGGATCG
11884537 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT--TATAAAGTTTGACGGGCTCGAATGT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTA-AAAGTTTGA-------GAA-GT
* * * *
11884600 TTGTCCAAGAACGAGGAGAGATACG
184 TCGTCCAAGAACCAAGAGAGATACA
* * *
11884625 ATTCTCACGAAAATATGTTTTTAATT-------C--AA--TG---ACCAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * *
11884676 GACCAAATGAAGCAATTT-TCTGTGCATGGAATTTTCGAGAAATGTCTTGAAGGAAAGGATCGTG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
** * * *
11884740 TTGAATACTTTAAACAACAGAAGTTACAAAAGAACTCGTAAAAGTTTGACG-AGTTCATCCAAGA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA-GAAGTTCGTCCAAGA
*
11884804 ACCATGAGAGATACA
194 ACCAAGAGAGATACA
* * * * * *
11884819 ATTCTCATGTAAATAAGTTTTTAACTCAAAGACCAAAATTTGTTCACAAAATGAGAAACTCTTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* ** ** *
11884884 GACCAAATAATATGATTTC-CAGAGCATGGAATGTTAAGGAAAT-TGCTTGAA-GAAATGGATCG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAA-GGATCG
* * * * * *
11884946 TGTTGAATACTATATGGAACCGAAGTTATAATAGAACTAGTAAAAATTTGACAAGTTTGAAAGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAGTT
*
11885011 CGTCCAAGAACCAAGAGATATACA
185 CGTCCAAGAACCAAGAGAGATACA
** *
11885035 ATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * ** * * * *
11885100 GACCAAATCATGTGATTTCTTGAGCATGGAATGTTCGGAAAATAACTTGAAGGAATGGATTGTCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * ** * * * *
11885165 CGAATACTTTAAGGTAGGGAAATTATAAAAGAAGTCATAAAAGTTTGACAAG-TCTGTCCAAGAA
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTC-GTCCAAGAA
*
11885229 -TAAGGAGAGATACA
195 CCAA-GAGAGATACA
* * * * * *
11885243 AGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * ** * *
11885307 GTCCAAATGATGGGATTTCCCGAGCATGGAATGCTCGATAAATGGCTCGATGGAAAGGATCGTCT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
*
11885372 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCAT
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCGT
11885436 CCAAGAACCAAGAGAGATACA
188 CCAAGAACCAAGAGAGATACA
* ** * * * *
11885457 ATTCCCATATAAATAAGTTTTTATTTTAAAGACCAAAAGTTGGTTAC-AAATGACAATCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
** * * *
11885521 GA-CAACATGATGCGATTTCTCGAGCATGGAATG--CTAGAAATGTTGTTCGAAGGAATGGATAG
66 GACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATG-T-CTCGAAGGAAAGGATCG
* * *
11885583 TCTTGAATACTTTAAGGAATCGAAGTTGTAAAAGAACTCGTCAAAGTTTGATGGGTTCAAATGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA---G----AA-GTT
* * *
11885648 TGTCCAAGAACGAGGAGAGATACA
185 CGTCCAAGAACCAAGAGAGATACA
* * *
11885672 ATTCTCACGAAAATATGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * *
11885737 GACCAAATGAAGCAATTT-TCTGTGCATGGGATTTTCGGGAAATGTCTTGAAGGAAAGGATCGTG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
** ** *
11885801 TTGAATACTTTAAACAACAAAAAGTTACAAAAGAACTCGTAAAAGTTTGACG-AGTTCGTCCAAG
130 TTGAATACTTTAAGGAAC-CGAAGTTATAAAAGAACTCGTAAAAGTTTGA-GAAGTTCGTCCAAG
*
11885865 AACCATGAGAGATACA
193 AACCAAGAGAGATACA
* * *
11885881 ATTCTCATGTAAATAAG-TTTTAACTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTCTTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* ** *
11885945 GACCAAATAATATGATTTC-CAGAGCATGGAATGTTCAGGAAAT-TGCTCGAA-GAAATGGATCG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGT-CTCGAAGGAAA-GGATCG
* * *
11886007 TCTTGAATACTATAAGGAACCGAAGTTAT-AAAGAACTAGTAAAAATTTGACAAGTTTGAAAGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A----G-AAGTT
*
11886071 CGTCCAAGAACCAAGAGAGATAAA
185 CGTCCAAGAACCAAGAGAGATACA
** *
11886095 ATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * ** ** * * * *
11886160 GACCAAATCATGCGATTTCTTGAGCATGGAATGTTTGAAAAATAACTTGAAGGAATGGATTGTCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* * * * * * *
11886225 GGAATACTTTAAGGTAGCGAAATTATAAAAGAAGTCATAAAAGTTTGACAAGTTCGTCCAAGAA-
131 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAAC
11886289 CAAGGAGAGATACA
196 CAA-GAGAGATACA
* * * * * * *
11886303 AGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAATTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * * *
11886367 GTCCAAATGATGGGATTTC-CTGAGCATGGAGTGCTCGGTAAATAG-CTCGATGGAAAGGACCAT
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGT
* * * *
11886430 CTTGAATACTTTAAGGAATCGAAGCTATAAAAGAACTCGTAAAAGTGTGACGAGTTCGAATGTTT
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGT-T--TGA----GAA-GTTC
11886495 GTCCAAGAA-CAAGGAGAGATACA
186 GTCCAAGAACCAA-GAGAGATACA
* * * *
11886518 ATTCTCACGAAAATAAGTTTTTAATTCAATGAACAAAAGTTGTTTACAAAATGATAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11886583 GACCAAATAAAGCGATTT-TCTATGCTTGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTG
66 GACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * * *
11886647 TTGAATACTTTAAGGAACAGAAGTTATAAAAGAACTTGTAAAAGTTTGACAAGATCGT-CAGAGA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCA-AGA
*
11886711 ACCATGAGAGATACA
194 ACCAAGAGAGATACA
* * *
11886726 ATTCTCACGTAAATAAGTTTTCAATTCAAAGACCAAAAGTTGTTTACAAAATGAGAAGCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11886791 GACCAAATTAAGCGATTT-TC-TG--T-GCA---T--GG-AATGT-TC---GGAAAGGATCATGT
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
* ** * *
11886841 TGAATACTTTAAGCAAAGAGAAGTTATAAAAGAACTCGTAAAAAGTTTGACAGGTTCGTCCAAGA
131 TGAATACTTTAAG-GAACCGAAGTTATAAAAGAACTCGT-AAAAGTTTGAGAAGTTCGTCCAAGA
***
11886906 ACCACTTGAGATACA
194 ACCAAGAGAGATACA
* * *
11886921 ACTT-TTACGTAACTAAGTTTTTAATTTAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
1 A-TTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * * * * *
11886985 GGACAAAATTATGCGATTTC-CCATGCATGGAATGTTTGAGAAATGTCTCGAAGGAAGGGATTGT
65 GGACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGT
* * * *
11887049 CTTGAATA-TTATAAGGGACAGAAGTTATAAATAAAAGAACTTGTAAAAATTTGACAAGTTTGGA
129 CTTGAATACTT-TAAGGAACCGAAG-T-T--ATAAAAGAACTCGTAAAAGTTTG---A-----GA
11887113 AGTTCGTCCAAGAACCAAGAGAGATACA
181 AGTTCGTCCAAGAACCAAGAGAGATACA
* * * * *
11887141 ATTCTCATGTAAATAAGTATTTAATTCGAAGACCAAAATTTGTTTACAAAATTACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** *
11887206 GACCAAATAATGTGATTTCTCGAGCATGGAATGTTCGAAAAATAG-CTCGAAGGAATGGATCGT-
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* * * *
11887269 TGTGAATACTTTAAGGAACCGTAGTTATAAAAGAAGTCATAAAAGTTTGACAAGTTCGTCCAAGA
130 T-TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGA
*
11887334 A-CAAGGAGAGACACA
194 ACCAA-GAGAGATACA
* * * * *
11887349 ATTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * * *
11887413 GTCCAAATGATACGATTTCTCGAGCATGGAATGCTCGGTAAAAGT-TTGACAAGTTCGTCCAAGA
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCG--AAG---G--AAAGG
* * ** * ** *
11887477 ACCAT-GAGAGATACAATTCTCACA-TAA-ATAAGTTTTTAATTCAA-AGAC-C--AAAAGTGGT
124 ATCGTCTTGA-ATAC--TT-T-A-AGGAACCGAAG-TTATAA---AAGA-ACTCGTAAAAGT--T
* * ** * * *
11887535 TTACAAAAT-GATAAACTATTTGGACCAA-ATGA-AGT--A
176 TGAGAAGTTCG-T---CCA--AGAACCAAGA-GAGA-TACA
* * ** *** * * *
11887571 ATTTTC-TGTGCATGGAATGTTCGGGAAATGTCTCAAAG--GAAAGGTTCGTGTTGAACACTTTA
1 ATTCTCACGTAAAT--AA-GTT--TTTAA--T-TCAAAGACCAAAAGTT-GT-TT--ACA---AA
* * * * * * * * ***
11887633 AGGAACAGAAGT-TATAGAAGAACTCGTAAAAGTTGGACAAGTTCGTC---CA-AGAACCCT-GA
51 ATG-ACA-AACTAT-TTG--G-AC-C--AAATGAT-G-CGATTTC-TCGAGCATGGAATGTTCG-
* * * * * * * * * * * *
11887692 GAGATACAAT-TTTC-ACGTAAA-TA-AGT-TT--TTAATTCAAAG-ACCAAAAGTTGTTTACAA
103 G-G--A-AATGTCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACC-GAAG-T-TATAAAA
* * * * * * * *
11887749 -AA-T-G-ACAAACTATTTGGACCAAATGGTGCGATTTCC--CATCCATG-GAATGTTTGAGAA
161 GAACTCGTA-AAA--GTTT-GA--GAA--GTTCG---TCCAAGAACCAAGAG-A-G-AT-A-CA
* * * * * * * * *
11887806 ATGTCTCGAAG-GAATGGATCGTGTTGAATACTATAAGGAACC-AAAGTTATAAATAAAAGAAT-
1 AT-TCTC-ACGTAAAT--A-AGTTTTTAATTC-A-AA-G-ACCAAAAGTTGT--TTACAA-AATG
* * * * * * *** *** **
11887868 TCTTAAA-AATTT-GA-CAAGT-TTG-GAAGTTCGTCCAAG-AACCAA-GAGAGATACAAT-TCT
54 AC--AAACTATTTGGACCAAATGATGCG-ATTTC-T-CGAGCATGGAATGTTCGGGA-AATGTCT
* * * ** ** * * * *
11887925 C-ATGTAAA-TAAGGAT-TT-AAT--TCGAA-G-ACCAAAAGTTGTTTACA-AA-T-G-ACAAAC
113 CGAAGGAAAGGATCG-TCTTGAATACTTTAAGGAACC-GAAGTT-ATAAAAGAACTCGTA-AAA-
* * * * * * * * *
11887978 TATTTGGACCAAATGATGCGATTTCTAG-AGCATG-GAATGTTCGAGAA
173 -GTTT-GA--GAA-G-TTCG--TCCAAGAACCAAGAG-A-GAT--A-CA
* * * * * * * * ** * *
11888025 ATAGCTTGAAG-GAAT-GGATCTTCTTGAATACTTTAAGGAACTGAAG-T-TATAAAAGAACTCG
1 AT-TC-TCACGTAAATAAG-T-TT-TT--A-A-TTCAAAGACCAAAAGTTGTTTACAA-AA-T-G
* ** * * *** * *
11888086 TA-AAAGT-TTGAATAGTTCCAAAGTTCG-TCCAAAAAC-CAAGAGACA-GGCAAT-TCTCATGT
54 -ACAAACTATT---T-GGACCAAA--T-GATGCGATTTCTC--GAG-CATGG-AATGT-TC-GGG
* * * * * **
11888145 AAATAAGTTTTTAATTCAAAGACCAAAAGCTGAT-TTCAAATGACAGCCTATT--GG-ACC-AA-
105 AAAT--G----T--CTCGAAG---GAAAG--GATCGTC--TTGA-ATACT-TTAAGGAACCGAAG
** ** ** ** **** * * **
11888204 --ATAATGCGATTTC-T-CGAGCATG-GAATGTTCAAAAAATAGCTCGAAG-GA-AT-GG
153 TTATAA-AAGAACTCGTAAAAGTTTGAGAA-GTTCGTCCAAGAAC-C-AAGAGAGATACA
* * * ** * ** *
11888256 A-TCGT--CGTGAAT-A-CTTTAAGGAACCAAAGTTA-TAAAAGAAGTCGTA-AAAGTATGACAA
1 ATTC-TCACGTAAATAAGTTTTTA--ATTCAAAG--ACCAAAAGTTGT-TTACAAA--ATGACAA
** * *** * * * * *** *
11888314 GTTCGTCCAAGAACAAGGAGTGATAC-AATTCT----CATGAAAATTAGTT--TTTAAT-TCAAC
58 ACT-AT-TTGGACCAA--A-TGATGCGATTTCTCGAGCATG-GAA-T-GTTCGGGAAATGTC-TC
** * * * * ** ** * **
11888371 G-ACCAAAAGCTGGT-TAAAAATGACAAACTATTTAATCCAAATGATGAGATTTCTCGAGCATGG
114 GAAGGAAAGGATCGTCT-----TGA-ATAC--TTTAA-GGAACCGA--AG--TTAT--A--AAAG
* * * **
11888434 AATGCTCGGTAAATAGCTCAATG-GAAAGGATCATCTTTAACACTTTAAGGAACCGA-AGTTATA
162 AA--CTC-GTAAA-AG-T--TTGAG-AA-G-T--TC-GT--C-C---AA-GAACCAAGAGAGATA
*
11888497 AA
207 CA
** *** *** * *
11888499 AGAACT--CGTAAAATTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATACAATTCCCA
1 A-TTCTCACGT-AAA--T---AAGTTTTTAA-TTCA---AAG-ACCAA-A-AG-T-TGTTTACAA
* * * * * * * * *
11888562 TAT-AAATAAGTTTTTATTTTAAAGACCAAAAGTTG-G-TTACAAATGACAACCTATTTGGACAA
50 AATGACA-AA----CTA-TTT--GGACCAAATGATGCGATTTC---T--CGAGC-A--TGG---A
* * * * * * * * * * **
11888624 CATGAT-GCG--ATTTCTCG-A-GCATGGA-AGGCTAGAAAAGTTCGTCCAA-GAACC-AAGAGA
96 -ATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCTTGAATACTT--T--AAGGAACCGAAGTTA
* * ** *
11888681 GATACAGTTCTCACGTAAATAAGGATTT---AA-TTCG---AAG-ACCAA-A-AG-T--T
156 TA-AAAGAACT--CGT-AA-AA-G-TTTGAGAAGTTCGTCCAAGAACCAAGAGAGATACA
* * * ***** ** * * ** ****
11888728 GTT-T-AC-AAAATGACAAACT-A-T-ATGGACCAAATGATGCGATTT-C-CCATG-CATGGAAT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-T-TG-TTTACAAAATGACAAACTAT
* * * * *** * * * * **
11888784 GTTCGA-GAAATGTCTCGAAGGAATGGATCG-TCTTGAAATACTATAAGG-AA---C-CGAAGTT
63 -TTGGACCAAATG-AT-G--CG-ATTTCTCGAGCATGGAAT-GT-TCGGGAAATGTCTCGAAG--
* * * * * **** * ** *
11888842 ATAAAAGAAT--TCGT-AAAACTTTGAAAAGTTTGGAAGTTCGTCCAAGAAC-C--AAGAGAG-A
118 --GAAAGGATCGTCTTGAATACTTT--AAGGAACCGAAGTT-ATAAAAGAACTCGTAA-A-AGTT
* * **
11888900 T-ACAA-TTC-T-CACGTAA--ATA-AG-GATTTA
176 TGAGAAGTTCGTCCAAG-AACCA-AGAGAGATACA
* * ** * **
11888927 ATTC-GAAG-ACCAA-AAGTTGTTT-A--CAAAATGA-CAAACTA-TT-TGGACCAAATG--ATG
1 ATTCTCACGTA--AATAAGTT-TTTAATTC-AAA-GACCAAA--AGTTGTTTACAAAATGACAAA
* * * *
11888981 CGATTT---CC-CATGCATG-GAATGT-TCGAG-A---AATGTCTC--G-AA-G----G-A--AT
59 CTATTTGGACCAAATG-ATGCG-ATTTCTCGAGCATGGAATGT-TCGGGAAATGTCTCGAAGGAA
** **** **
11889025 -GGATCGTCTTGAATACTACAAGGAACTTAAGTTATAAATAAAAAGAACTCGTAAAA-TTTGACA
121 AGGATCGTCTTGAATACTTTAAGG-AACCGAAGT-T--AT-AAAAGAACTCGTAAAAGTTTG---
11889088 AGTTTGGAAGTTCGTCCAAGAACCAAGAGAGATACA
178 A-----GAAGTTCGTCCAAGAACCAAGAGAGATACA
** *
11889124 ATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * ** * *
11889189 GACCAAATGATGAGATTTCTTGATCATGGAATGTTCGAAAAATAG-CTTGAAGGAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
**
11889253 TTGAATACTTTAAGGAACTAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCG
* * *
11889318 TCCAAGAGCCAAGAGACATATA
187 TCCAAGAACCAAGAGAGATACA
* * *
11889340 ATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTT-C-AAATGACAACCTATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTT
* *** * *
11889403 GGACCAAATGATGCGATTTCTGGAGCATGGAATGTTCAAAAAATAG-CTCAAAGGAATGGATCGT
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGT
* * ** * * *
11889467 CATGAATACTTTAAGCAACCGGTGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCATCCAAGA
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGA
*
11889532 ACAAAGAGAGATACA
194 ACCAAGAGAGATACA
* * * * * * *
11889547 ATTCTCATGTAAATTAGTTTTTAATTCAACGACCAAACGCTGGTTA-AAAAAGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * * * *
11889611 GTCTAAATGATGGGATTTCTCGAGCATGGAATGCTCGGCAAATAG-CTTGATGTAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* * *
11889675 TTGAATACTTTAAGGAATCGAAGATATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCG
* *
11889740 TCCAAGAACCAAGAGACAGACA
187 TCCAAGAACCAAGAGAGATACA
* * * *
11889762 ATTCTCATGTAAATAAGTTTTTAACTCAAAGACCAAAAGCTGATTT-C-AAATGACAAAATATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTT
** * * ** *
11889825 GGACCAAATGATTTGATATCTCGAGCATGGAATGTTTGAAAAATAG-CTCGAAGGAATGGATCGT
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGT
* * * *
11889889 CATGAATACTTTAAGGAACCGAAGTTATAAACGAAGTCGTAAAAGTTTGACAAGTTCGTCCAAGA
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGA
11889954 A-CAAGGAGAGATACA
194 ACCAA-GAGAGATACA
* * * * *
11889969 ATTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
** * * * * *
11890033 TTCCAAATGATGGGATTTAC-CGAGCATGGCATGCTT-GGTAAATAG-CTCGATGGAATGGATCG
66 GACCAAATGATGCGATTT-CTCGAGCATGGAATG-TTCGGGAAAT-GTCTCGAAGGAAAGGATCG
*
11890095 TCTTGAATACTTTAAGGAACCGAAGATATAAAAGAACTCGTAAAAGTTTGACGAGTTCGAATGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---GA----GAA-GTT
* * *
11890160 TGTCCAAGAACGAGGAGAGATACA
185 CGTCCAAGAACCAAGAGAGATACA
* * * * *
11890184 ATTCTCACGAAAAAAACTTTTTAATTCAATGACCAAGAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * ** ** *
11890249 AACCAAATGAAGCAATTT-TCTGTGCATGGAATGTTCGGGAAATGTCTCGAAGTAAACAATTATG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
** * * * *
11890313 TTGAATACTTTAAGGAACATAATTTATAAAAGAACTCATAAAAGTTTGACAAGTTCGTCTAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
* *
11890378 CTATGAGAGATACA
195 CCAAGAGAGATACA
* *
11890392 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTATTTACAAAATGACAAACTCTTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** *
11890457 GACCAAATGATGCGATTTC-CCATGCATGGAATGTTCGAGAAATGTCTCGAAGGAATTGATCATC
66 GACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * * * * * * **
11890521 TTGAATACTATATGGAACCAAAGTTATAAATAAAAAAATTCGTAAAAATTTGACAAGTT--TGGA
130 TTGAATACTTTAAGGAACCGAAG-T-T--ATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCA
*
11890584 AGTA-C------G-T--A
191 AGAACCAAGAGAGATACA
** * *
11890592 ATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTTTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** * *
11890657 GACCAAATGTTACGATTTCTCGAGCATGGAATGTTCGAAAAATAG-CTTGAAGGAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* * * * * *
11890721 TTGAATACTTTAAGGAACTGAACTAATAAAAGAACTCGTAATATTTTAACAAGTTCCAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---GAG-----AAGTTCG
* *
11890786 TCCAAGAACCAAGAGATAGACA
187 TCCAAGAACCAAGAGAGATACA
* ** * * ** *
11890808 ATTCTCATGTAAATAAACTTTTAATTCAAATATCAAAAGCTAATTT-C-AAATGACAACCTATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTT
* * * *
11890871 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC--GAAATATAGCTCAAAGGAATGAATCG
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT--CTCGAAGGAAAGGATCG
* * * * *
11890934 TCGTGAATACTTTAAGGAACCGAAATTATAAAAGAAGTTGTAAAAGTTTGACAAGTTCGTCCAAG
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAG
11890999 AA-CAAGGAGAGATACA
193 AACCAA-GAGAGATACA
* * * * * *
11891015 ATTCTCATGTAAATTAGTTTTTAATTGAATGACCAAAAGCTG-GTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
** * * * * * *
11891079 CTCCAAATGATGAGATTTCTAGAGCATGGAATGCTC-GGTAATAG-CTCGATGGAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* * *
11891142 TTGAATACTTTAAGGAATCGAAGTTGTAAAAGAACTCGTAAAATTTTGACAAGTTCCAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTTCG
11891207 TCCAAGAACCAAGAGAGATACA
187 TCCAAGAACCAAGAGAGATACA
** * * *
11891229 ATTCTCATATAAATAAGTTTTTAATTTAAAGACCAAAAGTTGGTTAC-AAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * * *
11891293 GA-CAACATTATGCAATTTCTCGAGCATGGAATGCTC-GAAAAGTTTTTCGAAGGAATGGATAGT
66 GACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAA-TGTCTCGAAGGAAAGGATCGT
* * *
11891356 CTTGAATACTTGAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTAATGAGTTCGAATATTT
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TT--TGA----GAA-GTTC
11891421 GTCCAAGAA-CAAGGAGAGATACA
186 GTCCAAGAACCAA-GAGAGATACA
** * *
11891444 ATTCTCACAAAAATAAGTTTTTTAATTTAATGACCAAAAGTTGTTTACAAAATGACAAACTATTT
1 ATTCTCACGTAAATAAG-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * * * *
11891509 GGACCAAATAAAGTGATTT-TCAGTGCATGGAATGTGT-AGGAAATGTCTTGAAGGAAAGGATCG
65 GGACCAAATGATGCGATTTCTC-GAGCATGGAATGT-TCGGGAAATGTCTCGAAGGAAAGGATCG
* ** * * * *
11891572 TGTTGAATACTTTAAACAACAGTAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAA
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAG
**
11891637 AACCATTAGAGATACA
193 AACCAAGAGAGATACA
* * *
11891653 ATTTTCACGTAAATAACTTTTTAACTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* *
11891718 GACCAAATGATGCGATTTC-CCATGCATGGAATGTTCGAGAAATGTCTCGAA-GAAATGGATCGT
66 GACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAA-GGATCGT
* *
11891781 CTTGAATACTATAAGGAACCGAAGTTATAAAAGAATTCGTCAAACTTTTAAAAGTTTG-GAAGTT
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA--C-T----C--GTAAAAGTTTGAGAAGTT
11891845 CGTCCAAGAACCAAGAGAGATACA
185 CGTCCAAGAACCAAGAGAGATACA
*
11891869 ATTCTCACGTAAATAAGTTTTTAATTCGAAGACCAAAAGTT-TTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * *
11891933 GACCAAATGATGCGATTTC-CCATGCATGGAATGTTCGAGAAATGTCTCGAAGGAATGGATCGTC
66 GACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * *
11891997 TTAAATACTATAAGGAACTGAAGTTATAAATAAAAGAACTCGTAAGAA-TTTGACAAGTTGGGAA
130 TTGAATACTTTAAGGAACCGAAG-T-T--ATAAAAGAACTCGTAA-AAGTTTG---A-----GAA
11892061 GTTCGTCCAAGAACCAAGAGAGATACA
182 GTTCGTCCAAGAACCAAGAGAGATACA
* ** *
11892088 ATTCTCACGTAAATATGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11892153 GACCAAATGATGCAATTTCTAGAGCATGGAGTGTTC-GAAATATAGGT-T-GAAGTAATGGATCG
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAA-AT--GTCTCGAAGGAAAGGATCG
* *
11892215 TCTTGAATACATTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG-----AAGTT
* *
11892280 CGTCCAAGAACCAAGAGACAGACA
185 CGTCCAAGAACCAAGAGAGATACA
* * *
11892304 ATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGATTT-C-AAATGACAACCTATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTT
*** * *
11892367 -GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAG-CTCGAAGGAATGGATCAT
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGT
* * * * *
11892430 -TGTGAATATTTTAAGGAACCTAATTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCGTCCAAG
129 CT-TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAG
*
11892494 AA-CAAGGAGAGAAACA
193 AACCAA-GAGAGATACA
* * * * *
11892510 ATTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11892574 GTCCAAATGATAG-GATTTCCCGAGCATGGAATGCTT-GGTAAATAG-CTCGATGGAATGGATCG
66 GACCAAATGAT-GCGATTTCTCGAGCATGGAATG-TTCGGGAAAT-GTCTCGAAGGAAAGGATCG
* *
11892636 TCTTGAATACTTTAAGGAACCGAAGATATAAATGAACTCGTAAAAGTTTGACGAGTTCGAATGTT
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---GA----GAA-GTT
* ** *
11892701 TGTCCAAGAATGAGGAGAGATACA
185 CGTCCAAGAACCAAGAGAGATACA
* * * *
11892725 ATTCTCAC-TAAAATAGGTTTTTATTTCAATGACCAAGAGTTGTTTACAAAATGACAAACTATTT
1 ATTCTCACGT-AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * * *
11892789 GGCCCAAATGAAG-GAATTT-TCTGTGCATGGAATGTTCGGGAAATGTCTCGAAGTAAAGGATCA
65 GGACCAAATGATGCG-ATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCG
* ** * * *
11892852 TGTTGAATACTTTAAGGAACATAAATTATAAAAGAACTCATAAAAGTTTGACAAGTTCGTCCAAG
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAG
*
11892917 AACCATGAGAGATACA
193 AACCAAGAGAGATACA
* * * * * * **
11892933 ATTCCCACGTGAAT-GGTTTTTCACTCAAAGACCAAAATTTGTTTACAAAATGACAAACGCTTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11892997 GACCAAATGATGCGAGTTC-CCATGCATGGAATGATCGAGAAATGTCTCGAAGGAATGGATTGTC
66 GACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
* * *
11893061 TTGAATACTATATA-GAACCAAAGTTATAAATAAAAGAATTCGTAAAAGTTTGACAAGTTTGGAA
130 TTGAATACTTTA-AGGAACCGAAG-T-T--ATAAAAGAACTCGTAAAAGTTTG---A-----GAA
* *
11893125 GTTCGTCCTAGAACCAAGAGAGACACA
182 GTTCGTCCAAGAACCAAGAGAGATACA
** *
11893152 ATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGAC-AACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
*** * * *
11893216 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAG-CTTGAAGGAATGGATCATC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
* * *
11893280 TTGAATACTTTAAGGAACTGATGTTATAAAAGAACTCATAAAAGTTTGACATGTTCCAAAGTTCG
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG--A-G-----AAGTTCG
* *
11893345 TCCAAGAACCAAGAGATACACA
187 TCCAAGAACCAAGAGAGATACA
* * *
11893367 ATTCTCATGTAAATAAGTTTTTAATTCAAAGACC-AAAGCTGATTT-C-AAATGACAACCTATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTT
* * * **
11893429 GGACCAAATGATGCAATTTCTCGAGCATGGAATGTT--TGAAATATAGCTCGAAGGATTGGATCG
65 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGT--CTCGAAGGAAAGGATCG
* * * *
11893492 TCGTGAATACTTTAAAGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCGTCCAAG
128 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAG
*
11893557 AA-TAAGGAGAGATACA
193 AACCAA-GAGAGATACA
* * * * *
11893573 ATTCTCATGTAAATTAGTTTTTAATTCAATGACCAAAAGCTG-GT---AAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11893634 GTCCAAATGATGAGATTTCTCGAGCATAGAATGCTCGGTAAATAG-CTCGATGGAAAGGATCGTC
66 GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTC
*
11893698 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAGTTCAT
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---AG----AAGTTCGT
*
11893763 CCAAGAACCAAGAGAGATATA
188 CCAAGAACCAAGAGAGATACA
** * * *
11893784 ATTCTCATATAAATAAGTTTTTAATTTAAAGACCAAAAGTTGGTTA-AAAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * ** * * * * * *
11893848 GA-CAACATTATGCAATTTCTCGATTATGGAATGCTC-GAAAAGTTTTTCGAAGGAATGGATAGT
66 GACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAA-TGTCTCGAAGGAAAGGATCGT
* *
11893911 CATGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGATGAGTTCGAATGTTT
129 CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TT--TGA----GAA-GTTC
* *
11893976 GTCCAAGAACGAGGAGAGATACA
186 GTCCAAGAACCAAGAGAGATACA
* *
11893999 ATTCTCACGAAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * * *
11894064 GATCAAATGAAGTGATTT-TCAGTGCATGGAATGTTCGGGAAATGTCTTGAAGGAAAGGATCATG
66 GACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTC
** * *
11894128 TTGAATACTTTAAACAACAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAA
130 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAA
**
11894193 CCATTAGAGATACA
195 CCAAGAGAGATACA
* *
11894207 ATTTTCACGTAAATAAGTTTTTAATTCATAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
11894272 GACCAAATGATGCGATTTC
66 GACCAAATGATGCGATTTC
11894291 CAGTGAATAA
Statistics
Matches: 20381, Mismatches: 3659, Indels: 3324
0.74 0.13 0.12
Matches are distributed among these distances:
177 3 0.00
178 4 0.00
179 6 0.00
180 6 0.00
181 1 0.00
182 6 0.00
183 3 0.00
184 2 0.00
185 3 0.00
186 3 0.00
187 1 0.00
188 2 0.00
189 3 0.00
191 18 0.00
192 46 0.00
193 46 0.00
194 138 0.01
195 127 0.01
196 128 0.01
197 56 0.00
198 98 0.00
199 42 0.00
200 195 0.01
201 161 0.01
202 172 0.01
203 141 0.01
204 206 0.01
205 268 0.01
206 1382 0.07
207 3430 0.17
208 2568 0.13
209 421 0.02
210 277 0.01
211 265 0.01
212 238 0.01
213 744 0.04
214 1933 0.09
215 2911 0.14
216 2325 0.11
217 460 0.02
218 67 0.00
219 300 0.01
220 352 0.02
221 44 0.00
222 35 0.00
223 32 0.00
224 34 0.00
225 18 0.00
226 14 0.00
227 15 0.00
228 23 0.00
229 20 0.00
230 11 0.00
231 26 0.00
232 16 0.00
233 25 0.00
234 25 0.00
235 27 0.00
236 20 0.00
237 46 0.00
238 20 0.00
239 6 0.00
240 23 0.00
241 70 0.00
242 26 0.00
243 24 0.00
244 32 0.00
245 33 0.00
246 30 0.00
247 33 0.00
248 5 0.00
250 3 0.00
251 3 0.00
252 5 0.00
253 4 0.00
254 11 0.00
255 7 0.00
256 5 0.00
257 3 0.00
258 3 0.00
259 3 0.00
260 6 0.00
261 7 0.00
262 6 0.00
263 2 0.00
264 2 0.00
266 1 0.00
267 2 0.00
268 3 0.00
269 7 0.00
270 4 0.00
271 2 0.00
272 1 0.00
ACGTcount: A:0.39, C:0.15, G:0.19, T:0.28
Consensus pattern (208 bp):
ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCT
TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGTCCAAGAAC
CAAGAGAGATACA
Found at i:11873768 original size:40 final size:40
Alignment explanation
Indices: 11873711--11873787 Score: 136
Period size: 40 Copynumber: 1.9 Consensus size: 40
11873701 TTACAAATGA
11873711 CAACCAATTTGGACCAAATGATGCAATTTCTCGAGCCCGG
1 CAACCAATTTGGACCAAATGATGCAATTTCTCGAGCCCGG
* *
11873751 CAACCTATTTGGTCCAAATGATGCAATTTCTCGAGCC
1 CAACCAATTTGGACCAAATGATGCAATTTCTCGAGCC
11873788 TAGAATGCTC
Statistics
Matches: 35, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
40 35 1.00
ACGTcount: A:0.29, C:0.27, G:0.18, T:0.26
Consensus pattern (40 bp):
CAACCAATTTGGACCAAATGATGCAATTTCTCGAGCCCGG
Found at i:11880215 original size:215 final size:215
Alignment explanation
Indices: 11879135--11887445 Score: 7237
Period size: 208 Copynumber: 39.6 Consensus size: 215
11879125 GTTGATAAGT
* * *
11879135 TTCGTCCTAGAACCAAGAGAGATACAATTCTCTCCT-AATAAGTTTTTAATTCAAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * ** * * *
11879199 TAGTTCAC-AAATGACAAAAAATTT-GACAAAATGATGCG-TCTTCTTGAGCAT-GAATGTTTCG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGAT-TTCTCGAGCATGGAATG-TTCG
* * * * * * *
11879260 -GAAA-TGTCTCGAAGGAAAGGA-CGTCTTGAATACTTTATGGTACTGAAGTTTTATAAGAACTC
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
*
11879322 GTAAAA-TTTGACAAGTTCCCAAG
193 GTAAAAGTTTGACAAGTT-CGAAG
* ** * *
11879345 TTCGTCCAAGAACCAAGAGAGATACAGTTCTCATATAAATAAGTTTTTTAATTGAATGACCAAAA
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTTAATTCAAAGACCAAAA
* * * *
11879410 GCTGGTTAC-AAATGAC-AACATATTTGGACAAAATGATGAGATTTCTCGAGCATGGGAATGCTC
65 GTTGTTTACAAAATGACAAAC-TATTTGGACCAAATGATGAGATTTCTCGAGCAT-GGAATGTTC
* * * * * *
11879473 GGAATATTGCTCAAAGGAATGGATAGTCTTGAATACATTAAGG-ACTGAAGTTATAAAA-AACTC
128 GAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
*
11879536 GTAGAAGTTTGACAAGTTCGAAAG
193 GTAAAAGTTTGACAAGTTCG-AAG
* * * * *
11879560 TTCGTCAAAGAACCAGGAGAGATTA-TATTCTCATGTAAATAAGTTTTTAATTCATAGACCAAAA
1 TTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
* * * * * *
11879624 GTTGTTTACGAAA-CACAAA-TAATTTGGACCAAATGATGCGAATTCCCAAGCATGGAATGTTC-
65 GTTGTTTACAAAATGACAAACT-ATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCG
*
11879686 AAGAAA-TGTCTCGAAGGAA-GGATCGTCTTGAATACTTTATGGAACCGAAG-T-TAAAAGAACT
129 AA-AAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
*
11879747 CGTAAAAATTTGACAAGTTC---G
192 CGTAAAAGTTTGACAAGTTCGAAG
* * *
11879768 -TC--CTAA-AACC-AGAGAGATACAATTCTTACATAAATAAGTTTTTAATTCAAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * *
11879828 TAGTTTTTCAAAATGACAAACTATTTGGACCAAATGATGCA-ATTTCTCGAGCATGGAATGTTCA
66 TTG-TTTACAAAATGACAAACTATTTGGACCAAATGATG-AGATTTCTCGAGCATGGAATGTTCG
* * *
11879892 AAAAATAGCTTGAA-GAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTAT-AAAGAACTCG
129 AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
* * *
11879955 TAACAGTCTGACAAGTTCCAAAG
194 TAAAAGTTTGACAAGTT-CGAAG
* * * *
11879978 TTC-ACCTACGAACCAAGAGAGATACAATTCTCATGTAAATAGGTTTTTAATTCAAAGACCAAAA
1 TTCGTCC-AAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
** * * * *
11880042 GCAAG-TTAC-AAATGACAACCTATTTGGACCAAATGATGAGATTTCTCGAGCCTAGAATGCTCG
65 G-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCG
* * *
11880105 AAAAATTGCTCGAAGGAATGAATCATCTTGAATGCTTTAAGGAACCGAAGTTATAAAAGAACTCG
129 AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
*
11880170 TAGAAGTTTGACAAGTTCGAAAG
194 TAAAAGTTTGACAAGTTCG-AAG
* * * *
11880193 TTTGTCCAAGAACGAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATT-AAATAACCAAAA
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAA-GACCAAAA
* * * * *
11880257 GTTGTTTACAAAATGACAAACTATTTGGAGCAAATGAAGCGATTTC-CCATGCATGGAATGTTTG
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGA-GCATGGAATGTTCG
** * * * *
11880321 GGAAA-TGTCTCGAAGGAAAGGATCGTGTTGAATAC-TGAAGGAATC-AAGTTATAAAAGAAACT
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG-AACT
11880383 CGTAAAAGTTTGACAAG-T-----
192 CGTAAAAGTTTGACAAGTTCGAAG
* *
11880401 TT-GTCCAAGAACCATGAGAGATACAATTTTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * *
11880465 TTGTTTACAAAATGACAAACTATTTGGACCGAATAATGTGATTTGC-AGAG-ATGGAATGTTCGG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTT-CTCGAGCATGGAATGTTCGA
* * * * * * * *
11880528 GAAATTGTTCAAAGGAAAGGATCGTCCTGAATACTTTAAGAAATCGAAGTTATAAAAGAACTTGT
130 AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
* * *
11880593 AAAAATTTGACAAATTTGGAAG
195 AAAAGTTTGAC-AAGTTCGAAG
* * * * * ** *
11880615 TTTGTGCAATAACCAAGAGAGATACAATTCTCATGTATATAAGGATTTAATTCGAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
** * * * * **
11880680 TTGAATACAAAATGACAAATTATTTGGACCAAATGATGATATTTCTCAAGCATAGAATGTTCGGG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGAA
* * *
11880745 AAA-TGTCTCAAAGGAAAGGATCGTCTTGAATACTTTAAGGAA-CGAAATTA-AAAAGAACTCGT
131 AAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
11880807 AAAAGTTTGAC-----C--AG
195 AAAAGTTTGACAAGTTCGAAG
* * * * *
11880821 TTCGTCCTAGAACCAAGAGAGATGCACTTCTCACATAAATAAGTTTTTAATTCAAAGACCAACAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * *
11880886 TAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGGGCATGGAATGTTCGAA
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGAA
* * * * ** * * * *
11880951 AAATAGATTGAATGAATGGATCACCGTGAATACTTTAAGGAACTGAAGTT-TAAAGGAACTCATA
131 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTA
* * *
11881015 AAAGTCTAACAAGTTCCATAG
196 AAAGTTTGACAAGTTCGA-AG
**
11881036 TTCGTCCAAGAACC-A-AGAGATACAA-TCTCATATAAATAAG-TTTTAATTCAAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * * *
11881097 CTGGTTAC-AAATGAC--CCTATTTGGACCAAATGATGCA-ATTGGT-TAGTGAATGCCTTGAAT
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATG-AGATT--TCT--CG-A-GCATGGAAT
* * *
11881157 GCTT-G-ACAATTACTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC---------AAAG
124 G-TTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11881211 AACTCGTAAAAGTTTGACAAGTTTGAAAG
188 AACTCGTAAAAGTTTGACAAGTTCG-AAG
* * * * *
11881240 TTTGACCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAATGACAAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * *
11881305 TTGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCA-ATTTCCCGTGCATGGAATGTT-TA
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATG-AGATTTCTCGAGCATGGAATGTTCGA
* * * *
11881368 GGAAA-TGTCTCGAAGGAA-AGATTGTCTTGAATA-TGTTAAGGAACCGAAGTTATAAATGAACT
130 -AAAATTG-CTCGAAGGAATGGATCGTCTTGAATACT-TTAAGGAACCGAAGTTATAAAAGAACT
*
11881430 CATAAAAGTTTGACAAG-T---A-
192 CGTAAAAGTTTGACAAGTTCGAAG
* * *
11881449 --CGTCCAAGAACCATGAGAGATACAATTCTCACGTAAAT-AGTTTTTAACTCAAAGACCAAAAT
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* *
11881511 TTTTTTACAAAATGACAAACTATTTAGACCAAAT-A-GTATGATTTC-CAGAGCATGGAATGTTC
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATG-A-GATTTCTC-GAGCATGGAATGTTC
** * * * **
11881573 GGGAAA-TGTCTTGAAGGGAA-GGATCGTGTTGAATACTTTAA-AAAAAGAAGTTATAAAAGAAC
128 GAAAAATTG-CTCGAA-GGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
11881635 TCGTAAAAGTTTG---A---C-AAG
191 TCGTAAAAGTTTGACAAGTTCGAAG
** * * *
11881653 TTCGTCCAAGAACCATTAGAGATGCAATTGTCACGTAAATAAGTTTTTAATTCAAAGACTAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * *
11881718 TTTTTTACAAAATGAC-AACTATTTGGACCAAATGATGCA-ATTTC-CCATGCGTGGAATGTTCG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATG-AGATTTCTCGA-GCATGGAATGTTCG
* * *
11881780 AGAAA-TGTCTCGAAGGATTGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTC
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
* *
11881844 GTAAAAATTTGACAAGTTTGGAAG
193 GTAAAAGTTTGACAAG-TTCGAAG
* * * ** * *
11881868 TTCGTACAAGAACCAAGAGAGATATAATTCTCACATAAATAAGGATTTAATTCGAACACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * *
11881933 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGTGATTTCCCGAGCATGGAATGCTCAAA
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGAA
* * * * *
11881998 AAATAGCTTGAAGGAATGGATCGTCGTGAATACATTAAGGAACCGAAGTTATAAAAGAAGTCGTA
131 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTA
*
11882063 AAAGTTTG---A----GATG
196 AAAGTTTGACAAGTTCGAAG
* * ** * *
11882076 TTCGTCCAAGAA-GAAGGAGAGATACAATTCTCATGTAAATTTGCTTTTAATTCAACGACCAAAA
1 TTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
* * * * * *
11882140 GCTGGTTA-AAAATGACAAACTATTTTGTCCAAATGATGCGATTTCTCGAGCATGGAATGCTCGA
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGA
* * * * *
11882204 TAAATAGCTCGATGGAATTGATCGTCTTGAATACTTTAAGGAACCAAAGTTAT-AAAGAACTCGT
130 AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
*
11882268 AAAAGTTTGACGAGTTCGAATG
195 AAAAGTTTGACAAGTTCGAA-G
* * * * * * * *
11882290 TTTGTCCAAGAACGAGGAGAGATACATTTCTCACGAAAATAAGTTTTTACTTCAATGACCGAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* *
11882355 TTGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCGATTTGCT--ATGCATGGAATGTTCG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTT-CTCGA-GCATGGAATGTTCG
** * * * * ***
11882418 GGAAA-TGTCTCGAAGGAAAGTATCGTGTTGAATACTTTATGGAGTAGAAGTTATAAAAGAACTC
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
11882482 GTAAAAGTTTG---A---C-AAG
193 GTAAAAGTTTGACAAGTTCGAAG
*
11882498 TTCGTCCAAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * ** *
11882563 TTGTTTACAAAATGACAAACAATTTGGACCAAATGAAGCTATTT-TCTGTGCATGGAATGTTCGA
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTC-GAGCATGGAATGTTCGA
* * * * ** *
11882627 GAAA-TGTCTCGAAGGAAAGGATCATGTTGAATACTTTAAGGAACAAAATTTATAAAAGAACTCG
130 AAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
11882691 TAAAAGTTTG---A---C-AAG
194 TAAAAGTTTGACAAGTTCGAAG
** ** * *
11882706 TTCGTCCAAGAACCATTAGAGATTTTTAATTC-AAAG-ACCAA-AAGTTGTTT-A--CAAAATGA
1 TTCGTCCAAGAACCA--AGAGAGATACAATTCTCACGTA--AATAAGTT-TTTAATTC-AAA-GA
** * ** * * *
11882765 -CAAACTA-TT-TGGACCAAAT-A-ATGCGATTT---CC-CATGCAATGA-A-TGCTCGAG-A--
59 CCAAA--AGTTGTTTACAAAATGACAAACTATTTGGACCAAATG--ATGAGATTTCTCGAGCATG
* * *
11882816 -AA---T-G------T-CTCGAAGGAATGGATAGTCTTGAATACTATAAGGAACCAAAGTTATAA
120 GAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAG-T-T-A
* * *
11882869 TTAAAAGACCTCGTAAAAATTTGACAAGTTTGGAAG
182 -TAAAAGAACTCGTAAAAGTTTGACAAG-TTCGAAG
* ** *
11882905 -TCATCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * *
11882969 TTGTTTACAAAATTACAAACTATTTGGACCAAATGATGCA-TTTTCTCGAGCATGTAATGTTC-A
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATG-AGATTTCTCGAGCATGGAATGTTCGA
* * * *
11883032 GAAAATAGATCGAAGGAATGGATCGTCGTGAATACTTTAAGGAACCGAAGTTATAAAAGAAGTCG
130 -AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
11883097 TAAAAGTTTGACAAGTTC----
194 TAAAAGTTTGACAAGTTCGAAG
* * *
11883115 -T--TCCAAGAA-CAAGGAGAGATACAATTCTCATGTAAATTAG-TTTTAATTCAACGACCAAAA
1 TTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
** * * * * * * * *
11883175 CCTGGTTA-AAAATGACAAACTATTTGGTCGAAATGATGGGATTTCCCAAGCATGGAATGCTCGG
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGA
* * * * * *
11883239 CAAATAGCTCGATGGAAAGGATCATCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGT
130 AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
*
11883304 AAAA-TTTGACAAGTTCCAAAG
195 AAAAGTTTGACAAGTT-CGAAG
* *
11883325 TTCGTCCAAGAACCAAGAGAGATACAATTC-C-CGTATAAATAAGTTTTTATTTTAAAGACCAAA
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACG--TAAATAAGTTTTTAATTCAAAGACCAAA
* * * *
11883388 AGTTGGTTAC-AAATGACAACCTATTTGGA-CAACATGATGCGATTTCTCGAGAATGGAA---TC
64 AGTTGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGAGATTTCTCGAGCATGGAATGTTC
* * *
11883448 TAAAAATGTTGTTCGAAGGAATGGATAGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
128 GAAAAA--TTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* *
11883513 TTGTAAAAGTTTGACGAGTTCGAATG
191 TCGTAAAAGTTTGACAAGTTCGAA-G
* ** * * * *
11883539 TTTGTCCAAGAATGAGGAGAGATACAATTCTCACGAAAATATGTTTTTAATTCAATGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * *
11883604 TTGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCA-ATTTTTCTGTGCATGGAATTTTTG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATG-AGATTTCTC-GAGCATGGAATGTTCG
** * * * ** * *
11883668 GGAAA-TGTCTTGAAGGAAAGGATCGTGTTGAATACTTTAAACAACAGAAGTTACAAAAGAACTC
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
11883732 GTAAAAGTTTG---A---CG-AG
193 GTAAAAGTTTGACAAGTTCGAAG
* * **
11883748 TTCGTCCAAGAACCATGAGAGATACAATTCTCATGTAAATAAGTTTTTAGCTCAAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * *
11883813 TTGATTACAAAATGACAAACTCTTTGGACCAAATAAT-ATGATTTCTAGAGCATGGAATGTTCCG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGA-GATTTCTCGAGCATGGAATGTT-CG
* * * *
11883877 -GAAATTGCTCGAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTAG
129 AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
* *
11883941 TAAAAATTTGACAAGTTTGAAAG
194 TAAAAGTTTGACAAGTTCG-AAG
** *
11883964 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * ***
11884029 TTGTTTACAAAATGACAAACTATTTGGACCAAATCATGCGATTTCTTTTGCATGGAATGTTCG-A
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGAA
** * * ** * * * * * *
11884093 AAATAACTTGAAGGAATGGATTGTCGCGAATACTTTAAGGTAGCAAAATTATAAAAGAAGTCATA
131 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTA
11884158 AAAGCTTT-ACAAGTTC--A-
196 AAAG-TTTGACAAGTTCGAAG
* * * *
11884175 ----TCCAAGAA-CAAGGAGAGATACAAGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAA
1 TTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
** * * * * * * *
11884235 CCTGGTTA-AAAATGACAAAATATTTGGTCCAAATGATGGGATTTCCCGAGCATGGAATGCTCGG
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGA
* * *
11884299 TAAATGGCTC-AATGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
130 AAAATTGCTCGAA-GGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
*
11884363 TAAAA-TTTGACAAGTTCCAAAG
194 TAAAAGTTTGACAAGTT-CGAAG
* ** * * *
11884385 TTCGTCCAAGAACCAAGAGAGATACAATTCCCATATAAATAAGTTTTTATTTTAAAGACTAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * *
11884450 TTGGTTAC-AAATGACAACCTATTTGGA-CAACATGATGCGATTTCTCGAGCATGGAATGCTAGA
66 TTGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGAGATTTCTCGAGCATGGAATGTTCGA
* * *
11884513 AAAGTTGTTCGAAGGAATGGATAGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT--T
130 AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
** *
11884576 ATAAAGTTTGACGGGCTCGAATG
195 A-AAAGTTTGACAAGTTCGAA-G
* * * * * *
11884599 TTTGTCCAAGAACGAGGAGAGATACGATTCTCACGAAAATATGTTTTTAATT-------C--AA-
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * *
11884654 -TG---ACCAAATGACAAACTATTTGGACCAAATGAAGCA-ATTT-TCTGTGCATGGAATTTTCG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATG-AGATTTCTC-GAGCATGGAATGTTCG
* * * * ** * *
11884713 AGAAA-TGTCTTGAAGGAAAGGATCGTGTTGAATACTTTAAACAACAGAAGTTACAAAAGAACTC
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
11884777 GTAAAAGTTTG---A---CG-AG
193 GTAAAAGTTTGACAAGTTCGAAG
* * * * *
11884793 TTCATCCAAGAACCATGAGAGATACAATTCTCATGTAAATAAGTTTTTAACTCAAAGACCAAAAT
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * *
11884858 TTGTTCACAAAATGAGAAACTCTTTGGACCAAATAAT-ATGATTTC-CAGAGCATGGAATGTT--
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGA-GATTTCTC-GAGCATGGAATGTTCG
* * * * * *
11884919 AAGGAAATTGCTTGAAGAAATGGATCGTGTTGAATACTATATGGAACCGAAGTTATAATAGAACT
129 AA--AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * *
11884984 AGTAAAAATTTGACAAGTTTGAAAG
192 CGTAAAAGTTTGACAAGTTCG-AAG
* ** *
11885009 TTCGTCCAAGAACCAAGAGATATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * *
11885074 TTGTTTACAAAATGACAAACTATTTGGACCAAATCATGTGATTTCTTGAGCATGGAATGTTCGGA
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGAA
** * * ** * ** * * *
11885139 AAATAACTTGAAGGAATGGATTGTCGCGAATACTTTAAGGTAGGGAAATTATAAAAGAAGTCATA
131 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTA
11885204 AAAGTTTGACAAG-TC----
196 AAAGTTTGACAAGTTCGAAG
* * * * *
11885219 -T-GTCCAAGAA-TAAGGAGAGATACAAGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAA
1 TTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
* * * * * *
11885281 GCTGGTTA-AAAATGACAAACTATTTGGTCCAAATGATGGGATTTCCCGAGCATGGAATGCTCGA
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGA
* * * *
11885345 TAAATGGCTCGATGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
130 AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
*
11885410 AAAA-TTTGACAAGTTCCAAAG
195 AAAAGTTTGACAAGTT-CGAAG
* * ** * *
11885431 TTCATCCAAGAACCAAGAGAGATACAATTCCCATATAAATAAGTTTTTATTTTAAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * *
11885496 TTGGTTAC-AAATGACAATCTATTTGGA-CAACATGATGCGATTTCTCGAGCATGGAATGCTAGA
66 TTGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGAGATTTCTCGAGCATGGAATGTTCGA
** * * * *
11885559 AATGTTGTTCGAAGGAATGGATAGTCTTGAATACTTTAAGGAATCGAAGTTGTAAAAGAACTCGT
130 AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
* *** *
11885624 CAAAGTTTGATGGGTTCAAATG
195 AAAAGTTTGACAAGTTCGAA-G
* * * * * *
11885646 TTTGTCCAAGAACGAGGAGAGATACAATTCTCACGAAAATATGTTTTTAATTCAATGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * *
11885711 TTGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCA-ATTT-TCTGTGCATGGGATTTTCG
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATG-AGATTTCTC-GAGCATGGAATGTTCG
** * * * ** ** *
11885774 GGAAA-TGTCTTGAAGGAAAGGATCGTGTTGAATACTTTAAACAACAAAAAGTTACAAAAGAACT
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC-CGAAGTTATAAAAGAACT
11885838 CGTAAAAGTTTG---A---CG-AG
192 CGTAAAAGTTTGACAAGTTCGAAG
* * *
11885855 TTCGTCCAAGAACCATGAGAGATACAATTCTCATGTAAATAAG-TTTTAACTCAAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* *
11885919 TTGTTTACAAAATGACAAACTCTTTGGACCAAATAAT-ATGATTTC-CAGAGCATGGAATGTTC-
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGA-GATTTCTC-GAGCATGGAATGTTCG
* * * *
11885981 AGGAAATTGCTCGAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTAT-AAAGAACTA
129 A-AAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
* *
11886045 GTAAAAATTTGACAAGTTTGAAAG
193 GTAAAAGTTTGACAAGTTCG-AAG
* ** *
11886069 TTCGTCCAAGAACCAAGAGAGATAAAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAG
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * *
11886134 TTGTTTACAAAATGACAAACTATTTGGACCAAATCATGCGATTTCTTGAGCATGGAATGTTTGAA
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGAA
** * * ** * * * * *
11886199 AAATAACTTGAAGGAATGGATTGTCGGGAATACTTTAAGGTAGCGAAATTATAAAAGAAGTCATA
131 AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTA
11886264 AAAGTTTG---A---C-AAG
196 AAAGTTTGACAAGTTCGAAG
* * * *
11886277 TTCGTCCAAGAA-CAAGGAGAGATACAAGTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAA
1 TTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
* * * * * * *
11886341 GCTGGTTA-AAAATGACAAATTATTTGGTCCAAATGATGGGATTTC-CTGAGCATGGAGTGCTCG
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTC-GAGCATGGAATGTTCG
** * * * * * * *
11886404 GTAAATAGCTCGATGGAAAGGACCATCTTGAATACTTTAAGGAATCGAAGCTATAAAAGAACTCG
129 AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
* *
11886469 TAAAAGTGTGACGAGTTCGAATG
194 TAAAAGTTTGACAAGTTCGAA-G
* * * *
11886492 TTTGTCCAAGAA-CAAGGAGAGATACAATTCTCACGAAAATAAGTTTTTAATTCAATGAACAAAA
1 TTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
* * * * * *
11886556 GTTGTTTACAAAATGATAAACTATTTGGACCAAATAAAGCGATTT-TCTATGCTTGGAATGTTCG
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGA-GCATGGAATGTTCG
** * * * *
11886620 GGAAA-TGTCTCGAAGGAAAGGATCGTGTTGAATACTTTAAGGAACAGAAGTTATAAAAGAACTT
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
11886684 GTAAAAGTTTGACAA----G-A-
193 GTAAAAGTTTGACAAGTTCGAAG
* *
11886701 -TCGT-CAGAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTCAATTCAAAGACCAAAA
1 TTCGTCCA-AGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
* * * * * *
11886764 GTTGTTTACAAAATGAGAAGCTATTTGGACCAAATTAAGCGATTT-TCTGTGCATGGAATGTTC-
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTC-GAGCATGGAATGTTCG
* * * **
11886827 -------G---G-A--AA-GGATCATGTTGAATACTTTAAGCAAAGAGAAGTTATAAAAGAACTC
129 AAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG-GAACCGAAGTTATAAAAGAACTC
11886878 GTAAAAAGTTTGAC-A----G--G
193 GT-AAAAGTTTGACAAGTTCGAAG
*** * * *
11886895 TTCGTCCAAGAACCACTTGAGATACAACTT-TTACGTAACTAAGTTTTTAATTTAAAGACCAAAA
1 TTCGTCCAAGAACCAAGAGAGATACAA-TTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
* * * * *
11886959 GTTGTTTACAAAATGACAAACTATTTGGACAAAATTATGCGATTTC-CCATGCATGGAATGTTTG
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGA-GCATGGAATGTTCG
* * * * *
11887023 AGAAA-TGTCTCGAAGGAAGGGATTGTCTTGAATA-TTATAAGGGACAGAAGTTATAAATAAAAG
129 AAAAATTG-CTCGAAGGAATGGATCGTCTTGAATACTT-TAAGGAACCGAAG-T-T--ATAAAAG
* * *
11887086 AACTTGTAAAAATTTGACAAGTTTGGAAG
188 AACTCGTAAAAGTTTGACAAG-TTCGAAG
* * * *
11887115 TTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTATTTAATTCGAAGACCAAAAT
1 TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * *
11887180 TTGTTTACAAAATTACAAACTATTTGGACCAAATAATGTGATTTCTCGAGCATGGAATGTTCGAA
66 TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGAA
* * * *
11887245 AAATAGCTCGAAGGAATGGATCGT-TGTGAATACTTTAAGGAACCGTAGTTATAAAAGAAGTCAT
131 AAATTGCTCGAAGGAATGGATCGTCT-TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
11887309 AAAAGTTTG---A---C-AAG
195 AAAAGTTTGACAAGTTCGAAG
* * * *
11887323 TTCGTCCAAGAA-CAAGGAGAGACACAATTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAA
1 TTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA
* * *
11887387 GCTGGTTA-AAAATGACAAACTATTTGGTCCAAATGAT-ACGATTTCTCGAGCATGGAATG
65 GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGA-GATTTCTCGAGCATGGAATG
11887446 CTCGGTAAAA
Statistics
Matches: 6612, Mismatches: 1076, Indels: 829
0.78 0.13 0.10
Matches are distributed among these distances:
187 35 0.01
188 1 0.00
189 2 0.00
190 1 0.00
191 20 0.00
193 21 0.00
194 72 0.01
195 117 0.02
196 24 0.00
197 11 0.00
198 29 0.00
199 5 0.00
200 12 0.00
201 91 0.01
202 23 0.00
203 59 0.01
204 65 0.01
205 110 0.02
206 683 0.10
207 799 0.12
208 947 0.14
209 179 0.03
210 80 0.01
211 79 0.01
212 150 0.02
213 251 0.04
214 764 0.12
215 919 0.14
216 777 0.12
217 89 0.01
218 4 0.00
219 45 0.01
220 143 0.02
221 5 0.00
ACGTcount: A:0.39, C:0.14, G:0.19, T:0.28
Consensus pattern (215 bp):
TTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTCGAGCATGGAATGTTCGAA
AAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTA
AAAGTTTGACAAGTTCGAAG
Found at i:11882856 original size:187 final size:191
Alignment explanation
Indices: 11882541--11882898 Score: 532
Period size: 187 Copynumber: 1.9 Consensus size: 191
11882531 CGTAAATAAG
*
11882541 TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTGGACCAAATGAAGCTATT
1 TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTGGACCAAATGAAGCGATT
* ** * * *
11882606 TTCTGTGCATGGAATGTTCGAGAAATGTCTCGAAGGAAAGGATCATGTTGAATACTTTAAGGAA-
66 TCCCATGCATGGAATGCTCGAGAAATGTCTCGAAGGAAAGGATCATCTTGAATACTATAAGGAAC
*
11882670 CAAAATT-T-A-TAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCATTAGAGA
131 CAAAATTATAATTAAAAGAACTCGTAAAAATTTGACAAGTTCGTCCAAGAACCATTAGAGA
*
11882728 TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT-AATGCGAT
1 TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTGGACCAAATGAA-GCGAT
*
11882792 TTCCCATGCAAT-GAATGCTCGAGAAATGTCTCGAAGGAATGGAT-AGTCTTGAATACTATAAGG
65 TTCCCATGC-ATGGAATGCTCGAGAAATGTCTCGAAGGAAAGGATCA-TCTTGAATACTATAAGG
* *
11882855 AACCAAAGTTATAATTAAAAGACCTCGTAAAAATTTGACAAGTT
128 AACCAAAATTATAATTAAAAGAACTCGTAAAAATTTGACAAGTT
11882899 TGGAAGTCAT
Statistics
Matches: 152, Mismatches: 12, Indels: 10
0.87 0.07 0.06
Matches are distributed among these distances:
186 3 0.02
187 112 0.74
188 8 0.05
189 1 0.01
190 1 0.01
191 27 0.18
ACGTcount: A:0.40, C:0.14, G:0.17, T:0.28
Consensus pattern (191 bp):
TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTGGACCAAATGAAGCGATT
TCCCATGCATGGAATGCTCGAGAAATGTCTCGAAGGAAAGGATCATCTTGAATACTATAAGGAAC
CAAAATTATAATTAAAAGAACTCGTAAAAATTTGACAAGTTCGTCCAAGAACCATTAGAGA
Found at i:11886964 original size:195 final size:193
Alignment explanation
Indices: 11886634--11887413 Score: 563
Period size: 220 Copynumber: 3.8 Consensus size: 193
11886624 ATGTCTCGAA
* * *
11886634 GGAAAGGATCGTGTTGAATACTTTAAGGAACAGAAGTTATAAAAGAACTTGTAAAAGTTTGACAA
1 GGAAAGGATCATGTTGAATACTTTAAGAAACAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAA
11886699 GATCGTCAGAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTCAATTCAAAGACCAAAA
66 GATCGTCAGAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTCAATTCAAAGACCAAAA
* * * * **
11886764 GTTGTTTACAAAATGAGAAGCTATTTGGACCAAATTAAGCGATTTTCTGTGCATGGAATGTTC
131 GTTGTTTACAAAATGACAAACTATTTGGACAAAATTAAGCGATTTCCCATGCATGGAATGTTC
*
11886827 GGAAAGGATCATGTTGAATACTTTAAGCAAAGAGAAGTTATAAAAGAACTCGTAAAAAGTTTGAC
1 GGAAAGGATCATGTTGAATACTTTAAG-AAACAGAAGTTATAAAAGAACTCGT-AAAAGTTTGAC
* * * * * * *
11886892 AGGTTCGTCCA-AGAACCACT-TGAGATACAACTT-TTACGTAACTAAGTTTTTAATTTAAAGAC
64 AAGATCGT-CAGAGAACCA-TGAGAGATACAA-TTCTCACGTAAATAAGTTTTCAATTCAAAGAC
*
11886954 CAAAAGTTGTTTACAAAATGACAAACTATTTGGACAAAATTATGCGATTTCCCATGCATGGAATG
126 CAAAAGTTGTTTACAAAATGACAAACTATTTGGACAAAATTAAGCGATTTCCCATGCATGGAATG
*
11887019 TTT
191 TTC
** **
11887022 GAGAAATGTCTCGAAGGAAGGGATTGTCTTGAATA-TTATAAGGGACAGAAGTTATAAATAAAAG
1 G-G--A-------AAGG-A-TCA-TG--TTGAATACTT-TAAGAAACAGAAG-T-T--ATAAAAG
* * * *
11887086 AACTTGTAAAAATTTGACAAGTTTGGAAGTTCGTCCA-AGAACCAAGAGAGATACAATTCTCATG
46 AACTCGTAAAAGTTTGACAA-----G-A--TCGT-CAGAGAACCATGAGAGATACAATTCTCACG
* * * *
11887150 TAAATAAGTATTT-AATTCGAAGACCAAAATTTGTTTACAAAATTACAAACTATTTGGACCAAA-
102 TAAATAAGT-TTTCAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACAAAAT
* *
11887213 TAATGTGATTTCTCGA-GCATGGAATGTTC
166 TAA-GCGATTTC-CCATGCATGGAATGTTC
* * * * * *
11887242 GAAAAATAGCTCGAAGGAATGGATCGTTGTGAATACTTTAAGGAACCGTAGTTATAAAAGAAGTC
1 G-------G---AAAGG-AT-CAT-G-T-TGAATACTTTAAGAAACAGAAGTTATAAAAGAACTC
* * * * * * * *
11887307 ATAAAAGTTTGACAAGTTCGTCCA-AGAACAAGGAGAGACACAATTCTCATGTAAATTAGTTTTT
51 GTAAAAGTTTGACAAGATCGT-CAGAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTC
* * *
11887371 AATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTGG
115 AATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGG
11887414 TCCAAATGAT
Statistics
Matches: 472, Mismatches: 65, Indels: 86
0.76 0.10 0.14
Matches are distributed among these distances:
193 26 0.06
194 22 0.05
195 119 0.25
196 6 0.01
198 1 0.00
205 4 0.01
206 1 0.00
207 22 0.05
208 60 0.13
209 8 0.02
210 12 0.03
211 2 0.00
212 11 0.02
213 13 0.03
216 23 0.05
217 1 0.00
218 1 0.00
219 7 0.01
220 124 0.26
221 7 0.01
226 2 0.00
ACGTcount: A:0.40, C:0.13, G:0.19, T:0.28
Consensus pattern (193 bp):
GGAAAGGATCATGTTGAATACTTTAAGAAACAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAA
GATCGTCAGAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTCAATTCAAAGACCAAAA
GTTGTTTACAAAATGACAAACTATTTGGACAAAATTAAGCGATTTCCCATGCATGGAATGTTC
Found at i:11887297 original size:220 final size:207
Alignment explanation
Indices: 11886859--11887445 Score: 621
Period size: 220 Copynumber: 2.8 Consensus size: 207
11886849 TTAAGCAAAG
* * ***
11886859 AGAAGTTATAAAAGAACTCGTAAAAAGTTTGACAGGTTCGTCCAAGAACCACTTGAGATACAACT
1 AGAAGTTATAAAAGAACTCATAAAAA-TTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAA-T
* * * *
11886924 T-TTACGTAACTAAGTTTTTAATTTAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGA
64 TCTCATGTAAATAAGTTTTTAA-TTCAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGA
* * * * * *
11886988 CAAAATTATGCGATTTC-CCATGCATGGAATGTTTGAGAAATGTCTCGAAGGAAGGGATTGTCTT
128 CCAAATAATGCGATTTCTCGA-GCATGGAATGTTCGAAAAATGTCTCGAAGGAAGGGATCGTCTT
*
11887052 GAATATTATAAGGGAC
192 GAATATTATAAGGAAC
**
11887068 AGAAGTTATAAATAAAAGAACTTGTAAAAATTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGA
1 AGAAG-T-T--ATAAAAGAACTCATAAAAATTTGAC--------AAGTTCGTCCAAGAACCAAGA
* * *
11887133 GAGATACAATTCTCATGTAAATAAGTATTTAATTCGAAGACCAAAATTTGTTTACAAAATTACAA
54 GAGATACAATTCTCATGTAAATAAGTTTTTAATTC-AAGACCAAAAGTTGTTTACAAAATGACAA
* *
11887198 ACTATTTGGACCAAATAATGTGATTTCTCGAGCATGGAATGTTCGAAAAATAG-CTCGAAGGAAT
118 ACTATTTGGACCAAATAATGCGATTTCTCGAGCATGGAATGTTCGAAAAAT-GTCTCGAAGGAAG
11887262 GGATCGT-TGTGAATACTT-TAAGGAAC
182 GGATCGTCT-TGAATA-TTATAAGGAAC
* * * * *
11887288 CGTAGTTATAAAAGAAGTCATAAAAGTTTGACAAGTTCGTCCAAGAA-CAAGGAGAGACACAATT
1 AGAAGTTATAAAAGAACTCATAAAAATTTGACAAGTTCGTCCAAGAACCAA-GAGAGATACAATT
* * * *
11887352 CTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTA-AAAATGACAAACTATTTGGTC
65 CTCATGTAAATAAGTTTTTAATTCAA-GACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAC
* *
11887416 CAAATGATACGATTTCTCGAGCATGGAATG
129 CAAATAATGCGATTTCTCGAGCATGGAATG
11887446 CTCGGTAAAA
Statistics
Matches: 320, Mismatches: 38, Indels: 42
0.80 0.09 0.10
Matches are distributed among these distances:
207 51 0.16
208 62 0.19
209 5 0.02
210 1 0.00
211 1 0.00
212 6 0.02
213 18 0.06
216 21 0.07
218 1 0.00
219 6 0.02
220 143 0.45
221 5 0.02
ACGTcount: A:0.39, C:0.13, G:0.19, T:0.29
Consensus pattern (207 bp):
AGAAGTTATAAAAGAACTCATAAAAATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTC
TCATGTAAATAAGTTTTTAATTCAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
AATAATGCGATTTCTCGAGCATGGAATGTTCGAAAAATGTCTCGAAGGAAGGGATCGTCTTGAAT
ATTATAAGGAAC
Found at i:11888288 original size:214 final size:214
Alignment explanation
Indices: 11887461--11888649 Score: 1281
Period size: 214 Copynumber: 5.6 Consensus size: 214
11887451 TAAAAGTTTG
* **
11887461 ACAAGTTCGTCCAAGAACCATGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAGACC
1 ACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC
* * ** *
11887526 AAAAG-TGGTTTACAAAATGATAAACTATTTGGACCAAATGAAGTAATTT-TCTGTGCATGGAAT
66 AAAAGTTGGTTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAAT
* * * * * *
11887589 GTTCGGGAAAT-GTCTCAAAGGAAAGGTTCGT-GTTGAACACTTTAAGGAA-CAGAAGTTATAGA
129 GTTCGAGAAATAG-CTCGAAGGAATGGATCGTCG-TGAATACTTTAAGGAACCA-AAGTTATAAA
11887651 AGAACTCGTAAAAG-TTG---G--
191 AGAACTCGTAAAAGTTTGAAAGTT
** * *
11887669 ACAAGTTCGTCCAAGAACCCTGAGAGATACAATTTTCACGTAAATAAGTTTTTAATTCAAAGACC
1 ACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC
* * *
11887734 AAAAGTT-GTTTACAAAATGACAAACTATTTGGACCAAATGGTGCGATTTC-CCATCCATGGAAT
66 AAAAGTTGGTTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAAT
* *
11887797 GTTTGAGAAAT-GTCTCGAAGGAATGGATCGT-GTTGAATACTATAAGGAACCAAAGTTATAAAT
129 GTTCGAGAAATAG-CTCGAAGGAATGGATCGTCG-TGAATACTTTAAGGAACCAAAG-T-T--AT
* * *
11887860 AAAAGAATTCTTAAAAATTTGACAAGTTT
188 AAAAGAACTCGTAAAAGTTTGA-AAG-TT
** ** *
11887889 GGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGGATTTAATTCGAAGACC
1 ACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC
*
11887954 AAAAGTT-GTTTACAAATGACAAACTATTTGGACCAAATGATGCGATTTCTAGAGCATGGAATGT
66 AAAAGTTGGTTTACAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * **
11888018 TCGAGAAATAGCTTGAAGGAATGGATCTTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAAC
131 TCGAGAAATAGCTCGAAGGAATGGATCGTCGTGAATACTTTAAGGAACCAAAGTTATAAAAGAAC
11888083 TCGTAAAAGTTTGAATAGTT
196 TCGTAAAAGTTTGAA-AGTT
* * * **
11888103 CCAAAGTTCGTCCAAAAACCAAGAGACAGGCAATTCTCATGTAAATAAGTTTTTAATTCAAAGAC
1 AC-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGAC
* * ** *
11888168 CAAAAGCTGATTT-CAAATGACAGCCTA-TTGGACCAAATAATGCGATTTCTCGAGCATGGAATG
65 CAAAAGTTGGTTTACAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG
* *
11888231 TTCAAAAAATAGCTCGAAGGAATGGATCGTCGTGAATACTTTAAGGAACCAAAGTTATAAAAGAA
130 TTCGAGAAATAGCTCGAAGGAATGGATCGTCGTGAATACTTTAAGGAACCAAAGTTATAAAAGAA
* *
11888296 GTCGTAAAAG--T---A-TG
195 CTCGTAAAAGTTTGAAAGTT
* * * *
11888310 ACAAGTTCGTCCAAGAA-CAAGGAGTGATACAATTCTCATGAAAATTAGTTTTTAATTCAACGAC
1 ACAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGAC
* * * *
11888374 CAAAAGCTGG-TTAAAAATGACAAACTATTT-AATCCAAATGATGAGATTTCTCGAGCATGGAAT
65 CAAAAGTTGGTTTACAAATGACAAACTATTTGGA-CCAAATGATGCGATTTCTCGAGCATGGAAT
* * * * * * *
11888437 GCTCG-GTAAATAGCTC-AATGGAAAGGATCATCTTTAACACTTTAAGGAACCGAAGTTATAAAA
129 GTTCGAG-AAATAGCTCGAA-GGAATGGATCGTCGTGAATACTTTAAGGAACCAAAGTTATAAAA
11888500 GAACTCGTAAAA-TTTGACAAGTT
192 GAACTCGTAAAAGTTTGA-AAGTT
* * * * * *
11888523 CCAAAGTTCATCCAAGAACCAAGAGAGATACAATTCCCATATAAATAAGTTTTTATTTTAAAGAC
1 AC-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGAC
*
11888588 CAAAAGTTGG-TTACAAATGACAACCTATTTGGA-CAACATGATGCGATTTCTCGAGCATGGAA
65 CAAAAGTTGGTTTACAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAA
11888650 GGCTAGAAAA
Statistics
Matches: 831, Mismatches: 111, Indels: 72
0.82 0.11 0.07
Matches are distributed among these distances:
205 5 0.01
206 73 0.09
207 93 0.11
208 160 0.19
209 4 0.00
210 1 0.00
212 17 0.02
213 8 0.01
214 204 0.25
215 101 0.12
216 3 0.00
217 2 0.00
218 1 0.00
219 88 0.11
220 71 0.09
ACGTcount: A:0.39, C:0.15, G:0.19, T:0.27
Consensus pattern (214 bp):
ACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC
AAAAGTTGGTTTACAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
TCGAGAAATAGCTCGAAGGAATGGATCGTCGTGAATACTTTAAGGAACCAAAGTTATAAAAGAAC
TCGTAAAAGTTTGAAAGTT
Found at i:11888424 original size:421 final size:418
Alignment explanation
Indices: 11887450--11888649 Score: 1378
Period size: 421 Copynumber: 2.8 Consensus size: 418
11887440 GGAATGCTCG
* *
11887450 GTAAAAGTTTGACAAGTTCGTCCAAGAACCATGAGAGATACAATTCTCA-CATAAATAAGTTTTT
1 GTAAAAGTTTGACAAGTTCGTCCAAGAA-CAAGAGAGATACAATTCTCATGA-AAATAAGTTTTT
* *
11887514 AATTCAAAGACCAAAAGTGGTTTACAAAATGATAAACTATTTGGACCAAATGAAGTA-ATTTTCT
64 AATTC-AAGACCAAAAGTGG-TTA-AAAATGACAAACTATTTGGACCAAATGATG-AGA-TTTCT
* * * * *
11887578 GTGCATGGAATGTTCGGGAAAT-GTCTCAAAGGAAAGGTTCGTGTTGAACACTTTAAGGAACAGA
124 GAGCATGGAATGTTC-GGAAATAG-CTTAAAGGAAAGGATCATCTTGAACACTTTAAGGAACAGA
* * **
11887642 AGTTATAGAAGAACTCGTAAAAG-TTG---G--AC-AAGTTCGTCCAAGAACCCTGAGAGATACA
187 AGTTATAAAAGAACTCGTAAAAGTTTGAAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATACA
* * *
11887700 ATTTTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
252 ATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTT-C-AAATGACAACCTATTTG
* * * ** *
11887765 GACCAAATGGTGCGATTTC-CCATCCATGGAATGTTTGAGAAATGTCTCGAAGGAATGGATCGTG
315 GACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCAAAAAATGTCTCGAAGGAATGGATCGTG
*
11887829 TTGAATACTATAAGGAACCAAAGTTATAAATAAAAGAATTC
379 TTGAATACTATAAGGAACCAAAGTTAT-AATAAAAGAAGTC
* * *
11887870 TTAAAAATTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATA
1 GTAAAAGTTTGAC--------AAGTTCGTCCAAGAA-CAAGAGAGATACAATTCTCATGAAAATA
** * * *
11887935 AGGATTTAATTCGAAGACCAAAAGTTGTTTACAAATGACAAACTATTTGGACCAAATGATGCGAT
57 AGTTTTTAATTC-AAGACCAAAAG-TGGTTAAAAATGACAAACTATTTGGACCAAATGATGAGAT
* * * *
11888000 TTCTAGAGCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCTTCTTGAATACTTTAAGGAA
120 TTCT-GAGCATGGAATGTTCG-GAAATAGCTTAAAGGAAAGGATCATCTTGAACACTTTAAGGAA
* * *
11888065 CTGAAGTTATAAAAGAACTCGTAAAAGTTTGAATAGTTCCAAAGTTCGTCCAAAAACCAAGAGAC
183 CAGAAGTTATAAAAGAACTCGTAAAAGTTTGAA-AGTTCCAAAGTTCGTCCAAGAACCAAGAGAG
** * *
11888130 AGGCAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGATTTCAAATGACAGCCTA
247 ATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTCAAATGACAACCTA
*
11888195 -TTGGACCAAATAATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAG-CTCGAAGGAATGGAT
311 TTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAAT-GTCTCGAAGGAATGGAT
*
11888258 CGTCG-TGAATACTTTAAGGAACCAAAG-T-T-ATAAAAGAAGTC
375 CGT-GTTGAATACTATAAGGAACCAAAGTTATAATAAAAGAAGTC
* * *
11888299 GTAAAAGTATGACAAGTTCGTCCAAGAACAAGGAGTGATACAATTCTCATGAAAATTAGTTTTTA
1 GTAAAAGTTTGACAAGTTCGTCCAAGAACAA-GAGAGATACAATTCTCATGAAAATAAGTTTTTA
*
11888364 ATTCAACGACCAAAAGCTGGTTAAAAATGACAAACTATTT-AATCCAAATGATGAGATTTCTCGA
65 ATTCAA-GACCAAAAG-TGGTTAAAAATGACAAACTATTTGGA-CCAAATGATGAGATTTCT-GA
* * * * *
11888428 GCATGGAATGCTCGGTAAATAGCTCAATGGAAAGGATCATCTTTAACACTTTAAGGAACCGAAGT
126 GCATGGAATGTTCGG-AAATAGCTTAAAGGAAAGGATCATCTTGAACACTTTAAGGAACAGAAGT
*
11888493 TATAAAAGAACTCGTAAAA-TTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATACAAT
190 TATAAAAGAACTCGTAAAAGTTTGA-AAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAAT
* * * * *
11888557 TCCCATATAAATAAGTTTTTATTTTAAAGACCAAAAGTTGGTTACAAATGACAACCTATTTGGA-
254 TCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT-GTTTCAAATGACAACCTATTTGGAC
11888621 CAACATGATGCGATTTCTCGAGCATGGAA
318 CAA-ATGATGCGATTTCTCGAGCATGGAA
11888650 GGCTAGAAAA
Statistics
Matches: 666, Mismatches: 80, Indels: 67
0.82 0.10 0.08
Matches are distributed among these distances:
420 108 0.16
421 200 0.30
426 6 0.01
427 101 0.15
428 68 0.10
429 23 0.03
431 1 0.00
432 2 0.00
433 75 0.11
434 16 0.02
435 63 0.09
436 3 0.00
ACGTcount: A:0.39, C:0.15, G:0.19, T:0.27
Consensus pattern (418 bp):
GTAAAAGTTTGACAAGTTCGTCCAAGAACAAGAGAGATACAATTCTCATGAAAATAAGTTTTTAA
TTCAAGACCAAAAGTGGTTAAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTGAGCATG
GAATGTTCGGAAATAGCTTAAAGGAAAGGATCATCTTGAACACTTTAAGGAACAGAAGTTATAAA
AGAACTCGTAAAAGTTTGAAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATG
TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTCAAATGACAACCTATTTGGACCAAATGAT
GCGATTTCTCGAGCATGGAATGTTCAAAAAATGTCTCGAAGGAATGGATCGTGTTGAATACTATA
AGGAACCAAAGTTATAATAAAAGAAGTC
Found at i:11889439 original size:215 final size:215
Alignment explanation
Indices: 11888657--11894290 Score: 5928
Period size: 215 Copynumber: 26.5 Consensus size: 215
11888647 GAAGGCTAGA
* ** *
11888657 AAAGTTCGTCCAAGAACCAAGAGAGATACAGTTCTCACGTAAATAAGGATTTAATTCGAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* *
11888722 AAAGTTGTTTACAAAATGACAAACTATATGGACCAAATGATGCGATTTC-CCATGCATGGAATGT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGT
*
11888786 TCGAGAAAT-GTCTCGAAGGAATGGATCGTCTTGAAATACTATAAGGAACCGAAGTTATAAAAGA
130 TCGAGAAATAG-CTCGAAGGAATGGATCGTCTTG-AATACTTTAAGGAACCGAAGTTATAAAAGA
* * * *
11888850 ATTCGTAAAACTTTGAAAAGTTTG
193 ACTCGTAAAAGTTTGACAAG-TTC
* ** *
11888874 GAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
*
11888939 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC-CCATGCATGGAATGT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGT
** **
11889003 TCGAGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTACAAGGAACTTAAGTTATAAATAAA
130 TCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAG-T-T--AT-AA
*
11889067 AAGAACTCGTAAAA-TTTGACAAGTTTG
189 AAGAACTCGTAAAAGTTTGACAAG-TTC
* ** *
11889094 GAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11889159 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTTGATCATGGAATGTT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * **
11889224 CGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTAAAGTTATAAAAGAACT
131 CGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
11889289 CGTAAAAGTTTGACAAGTTCC
196 CGTAAAAGTTTGACAAGTT-C
* * * *
11889310 AAAGTTCGTCCAAGAGCCAAGAGACATATAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11889375 AAAGCTGGTTT-C-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTGGAGCATGGAATGT
66 AAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * ** *
11889438 TCAAAAAATAGCTCAAAGGAATGGATCGTCATGAATACTTTAAGCAACCGGTGTTATAAAAGAAG
130 TCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
11889503 TCGTAAAAGTTTGACAAGTTC
195 TCGTAAAAGTTTGACAAGTTC
* * * *
11889524 --A-----TCCAAGAACAAAGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTCAACGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * *
11889582 AACGCTGGTTA-AAAAAGACAAACTATTTGGTCTAAATGATGGGATTTCTCGAGCATGGAATGCT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * *
11889646 CG-GCAAATAGCTTGATGTAATGGATCGTCTTGAATACTTTAAGGAATCGAAGATATAAAAGAAC
131 CGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
11889710 TCGTAAAAGTTTGACAAGTTCC
195 TCGTAAAAGTTTGACAAGTT-C
* * * * *
11889732 AAAGTTCATCCAAGAACCAAGAGACAGACAATTCTCATGTAAATAAGTTTTTAACTCAAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * ** *
11889797 AAAGCTGATTT-C-AAATGACAAAATATTTGGACCAAATGATTTGATATCTCGAGCATGGAATGT
66 AAAGTTG-TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * *
11889860 TTGAAAAATAGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACCGAAGTTATAAACGAAG
130 TCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
11889925 TCGTAAAAGTTTG---A---C
195 TCGTAAAAGTTTGACAAGTTC
* * *
11889940 -AAGTTCGTCCAAGAA-CAAGGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTCAACGACC
1 AAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * ** * *
11890003 AAAAGCTGGTTA-AAAATGACAAACTATTTGTTCCAAATGATGGGATTTAC-CGAGCATGGCATG
65 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTT-CTCGAGCATGGAATG
* *
11890066 CTT-G-GTAAATAGCTCGATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGATATAAAAG
129 -TTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11890129 AACTCGTAAAAGTTTGACGAGTTC
192 AACTCGTAAAAGTTTGACAAGTTC
* * * * * * * *
11890153 GAATGTTTGTCCAAGAACGAGGAGAGATACAATTCTCACGAAAAAAACTTTTTAATTCAATGACC
1 -AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * * *
11890218 AAGAGTTGTTTACAAAATGACAAACTATTTGAACCAAATGAAGCAATTT-TCTGTGCATGGAATG
65 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATG
* * *** ** * ** *
11890282 TTCGGGAAAT-GTCTCGAAGTAAACAATTATGTTGAATACTTTAAGGAACATAATTTATAAAAGA
129 TTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGA
*
11890346 ACTCATAAAAGTTTGACAAGTTC
193 ACTCGTAAAAGTTTGACAAGTTC
* *
11890369 ---G-TC-T--AAGAACTATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11890427 AAAGTTATTTACAAAATGACAAACTCTTTGGACCAAATGATGCGATTTC-CCATGCATGGAATGT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGT
* * * * *
11890491 TCGAGAAAT-GTCTCGAAGGAATTGATCATCTTGAATACTATATGGAACCAAAGTTATAAATAAA
130 TCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAG-T-T--ATAAA
* * *
11890555 AAAATTCGTAAAAATTTGACAAG-T-
190 AGAACTCGTAAAAGTTTGACAAGTTC
* * ** *
11890579 ----TT-G--GAAGTA-C------G-T--AATTCTCACGTAAATAAGGATTTAATTCGAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11890627 AAAGTTTTTTACAAAATGACAAACTATTTGGACCAAATGTTACGATTTCTCGAGCATGGAATGTT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * *
11890692 CGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAACTAATAAAAGAACT
131 CGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * *
11890757 CGTAATATTTTAACAAGTTCC
196 CGTAAAAGTTTGACAAGTT-C
* * * ** * *
11890778 AAAGTTCGTCCAAGAACCAAGAGATAGACAATTCTCATGTAAATAAACTTTTAATTCAAATATCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
** *
11890843 AAAGCTAATTT-C-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
66 AAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * *
11890906 TCGA-AATATAGCTCAAAGGAATGAATCGTCGTGAATACTTTAAGGAACCGAAATTATAAAAGAA
130 TCGAGAA-ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* *
11890970 GTTGTAAAAGTTTG---A---C
194 CTCGTAAAAGTTTGACAAGTTC
* * * *
11890986 -AAGTTCGTCCAAGAA-CAAGGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTGAATGACC
1 AAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * ** * * *
11891049 AAAAGCTG-GTACAAAATGACAAACTATTTGCTCCAAATGATGAGATTTCTAGAGCATGGAATGC
65 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * *
11891113 TCG-GTAATAGCTCGATGGAATGGATCGTCTTGAATACTTTAAGGAATCGAAGTTGTAAAAGAAC
130 TCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
*
11891177 TCGTAAAATTTTGACAAGTTCC
195 TCGTAAAAGTTTGACAAGTT-C
** *
11891199 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATATAAATAAGTTTTTAATTTAAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
11891264 AAAGTTGGTTAC-AAATGACAACCTATTTGGA-CAACATTATGCAATTTCTCGAGCATGGAATGC
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGT
*** * *
11891327 TCGA-AAAGTTTTTCGAAGGAATGGATAGTCTTGAATACTTGAAGGAACCGAAGTTATAAAAGAA
130 TCGAGAAA-TAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* **
11891391 CTCGTAAAAGTTTAATGAGTTC
194 CTCGTAAAAGTTTGACAAGTTC
* ** * *
11891413 GAATA-TTTGTCCAAGAA-CAAGGAGAGATACAATTCTCACAAAAATAAGTTTTTTAATTTAATG
1 -AA-AGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAG-TTTTTAATTCAAAG
* * * *
11891476 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATAAAGTGATTT-TCAGTGCATGGA
62 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGA
* * * * ** * *
11891540 ATGTGTAG-GAAAT-GTCTTGAAGGAAAGGATCGTGTTGAATACTTTAAACAACAGTAGTTATAA
126 ATGT-TCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
11891603 AAGAACTCGTAAAAGTTTG---A---C
189 AAGAACTCGTAAAAGTTTGACAAGTTC
* ** * * *
11891624 -AAGTTCGTCCAAAAACCATTAGAGATACAATTTTCACGTAAATAACTTTTTAACTCAAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
*
11891688 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC-CCATGCATGGAATGT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGT
* *
11891752 TCGAGAAAT-GTCTCGAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAA
130 TCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * * *
11891816 TTCGTCAAACTTTTAAAAGTTTG
194 CTCGTAAAAGTTTGACAAG-TTC
* *
11891839 GAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCGAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
*
11891904 AAAGTT-TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC-CCATGCATGGAATGT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGT
* * *
11891967 TCGAGAAAT-GTCTCGAAGGAATGGATCGTCTTAAATACTATAAGGAACTGAAGTTATAAATAAA
130 TCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAG-T-T--ATAAA
*
11892031 AGAACTCGTAAGAA-TTTGACAAGTTGG
190 AGAACTCGTAA-AAGTTTGACAAGTT-C
* * ** *
11892058 GAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATATGGATTTAATTCGAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11892123 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTAGAGCATGGAGTGTT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * *
11892188 CGA-AATATAGGTTGAAGTAATGGATCGTCTTGAATACATTAAGGAACTGAAGTTATAAAAGAAC
131 CGAGAA-ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
11892252 TCGTAAAAGTTTGACAAGTTCC
195 TCGTAAAAGTTTGACAAGTT-C
* * *
11892274 AAAGTTCGTCCAAGAACCAAGAGACAGACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* *
11892339 AAAGCTGATTT-C-AAATGACAACCTATTT-GACCAAATGATGCGATTTCTCGAGCATGGAATGT
66 AAAGTTG-TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * *
11892401 TCAAAAAATAGCTCGAAGGAATGGATCAT-TGTGAATATTTTAAGGAACCTAATTTATAAAAGAA
130 TCGAGAAATAGCTCGAAGGAATGGATCGTCT-TGAATACTTTAAGGAACCGAAGTTATAAAAGAA
*
11892465 GTCGTAAAAGTTTG---A---C
194 CTCGTAAAAGTTTGACAAGTTC
* * * *
11892481 -AAGTTCGTCCAAGAA-CAAGGAGAGAAACAATTCTCATGTAAATTAGTTTTTAATTCAACGACC
1 AAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * *
11892544 AAAAGCTGGTTA-AAAATGACAAACTATTTGGTCCAAATGATAG-GATTTCCCGAGCATGGAATG
65 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT-GCGATTTCTCGAGCATGGAATG
* * *
11892607 CTT-G-GTAAATAGCTCGATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGATATAAATG
129 -TTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11892670 AACTCGTAAAAGTTTGACGAGTTC
192 AACTCGTAAAAGTTTGACAAGTTC
* * ** * * * *
11892694 GAATGTTTGTCCAAGAATGAGGAGAGATACAATTCTCAC-TAAAATAGGTTTTTATTTCAATGAC
1 -AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT-AAATAAGTTTTTAATTCAAAGAC
* * * *
11892758 CAAGAGTTGTTTACAAAATGACAAACTATTTGGCCCAAATGAAG-GAATTT-TCTGTGCATGGAA
64 CAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCG-ATTTCTC-GAGCATGGAA
* * * * * ** *
11892821 TGTTCGGGAAAT-GTCTCGAAGTAAAGGATCATGTTGAATACTTTAAGGAACATAAATTATAAAA
127 TGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11892885 GAACTCATAAAAGTTTG---A---C
191 GAACTCGTAAAAGTTTGACAAGTTC
* * * * * *
11892904 -AAGTTCGTCCAAGAACCATGAGAGATACAATTCCCACGTGAAT-GGTTTTTCACTCAAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* ** * * *
11892967 AAATTTGTTTACAAAATGACAAACGCTTTGGACCAAATGATGCGAGTTC-CCATGCATGGAATGA
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGT
* * *
11893031 TCGAGAAAT-GTCTCGAAGGAATGGATTGTCTTGAATACTATATA-GAACCAAAGTTATAAATAA
130 TCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTA-AGGAACCGAAG-T-T--ATAA
* *
11893094 AAGAATTCGTAAAAGTTTGACAAGTTTG
189 AAGAACTCGTAAAAGTTTGACAAG-TTC
* * * ** *
11893122 GAAGTTCGTCCTAGAACCAAGAGAGACACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
11893187 AAAGTTGTTTACAAAATGAC-AACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * *
11893251 CAAAAAATAGCTTGAAGGAATGGATCATCTTGAATACTTTAAGGAACTGATGTTATAAAAGAACT
131 CGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* *
11893316 CATAAAAGTTTGACATGTTCC
196 CGTAAAAGTTTGACAAGTT-C
* * *
11893337 AAAGTTCGTCCAAGAACCAAGAGATACACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC-
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11893401 AAAGCTGATTT-C-AAATGACAACCTATTTGGACCAAATGATGCAATTTCTCGAGCATGGAATGT
66 AAAGTTG-TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * *
11893464 TTGA-AATATAGCTCGAAGGATTGGATCGTCGTGAATACTTTAAAGAACCGAAGTTATAAAAGAA
130 TCGAGAA-ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
*
11893528 GTCGTAAAAGTTTG---A---C
194 CTCGTAAAAGTTTGACAAGTTC
* * * *
11893544 -AAGTTCGTCCAAGAA-TAAGGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTCAATGACC
1 AAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * * * *
11893607 AAAAGCTG-GT---AAATGACAAACTATTTGGTCCAAATGATGAGATTTCTCGAGCATAGAATGC
65 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* *
11893668 TCG-GTAAATAGCTCGATGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
130 TCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
11893732 CTCGTAAAAGTTTGACAAGTTC
194 CTCGTAAAAGTTTGACAAGTTC
* * * ** *
11893754 CAAGTTCATCCAAGAACCAAGAGAGATATAATTCTCATATAAATAAGTTTTTAATTTAAAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * ** *
11893819 AAAGTTGGTTA-AAAATGACAACCTATTTGGA-CAACATTATGCAATTTCTCGATTATGGAATGC
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGT
*** * *
11893882 TCGA-AAAGTTTTTCGAAGGAATGGATAGTCATGAATACTTTAAGGAACCGAAGTTATAAAAGAA
130 TCGAGAAA-TAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
**
11893946 CTCGTAAAAGTTTGATGAGTTC
194 CTCGTAAAAGTTTGACAAGTTC
* * * * * *
11893968 GAATGTTTGTCCAAGAACGAGGAGAGATACAATTCTCACGAAAATAAGTTTTTAATTCAATGACC
1 -AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * *
11894033 AAAAGTTGTTTACAAAATGACAAACTATTTGGATCAAATGAAGTGATTT-TCAGTGCATGGAATG
65 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATG
* * * * * ** *
11894097 TTCGGGAAAT-GTCTTGAAGGAAAGGATCATGTTGAATACTTTAAACAACAGAAGTTATAAAAGA
129 TTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGA
11894161 ACTCGTAAAAGTTTG---A---C
193 ACTCGTAAAAGTTTGACAAGTTC
** * *
11894178 -AAGTTCGTCCAAGAACCATTAGAGATACAATTTTCACGTAAATAAGTTTTTAATTCATAGACCA
1 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
11894242 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
66 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
11894291 CAGTGAATAA
Statistics
Matches: 4588, Mismatches: 623, Indels: 420
0.81 0.11 0.07
Matches are distributed among these distances:
196 23 0.01
197 1 0.00
199 1 0.00
200 131 0.03
201 3 0.00
202 1 0.00
203 3 0.00
204 113 0.02
205 11 0.00
206 210 0.05
207 656 0.14
208 424 0.09
209 37 0.01
210 15 0.00
211 86 0.02
212 31 0.01
213 24 0.01
214 435 0.09
215 931 0.20
216 621 0.14
217 276 0.06
218 15 0.00
219 207 0.05
220 314 0.07
221 19 0.00
ACGTcount: A:0.39, C:0.14, G:0.19, T:0.28
Consensus pattern (215 bp):
AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
CGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
CGTAAAAGTTTGACAAGTTC
Found at i:11889705 original size:422 final size:423
Alignment explanation
Indices: 11888658--11894290 Score: 5869
Period size: 422 Copynumber: 13.3 Consensus size: 423
11888648 AAGGCTAGAA
* ** *
11888658 AAGTTCGTCCAAGAACCAAGAGAGATACAGTTCTCACGTAAATAAGGATTTAATTCGAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
* *
11888723 AAGTTGTTTACAAAATGACAAACTATATGGACCAAATGATGCGATTTC-CCATGCATGGAATGTT
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTT
*
11888787 CGAGAAAT-GTCTCGAAGGAATGGATCGTCTTGAAATACTATAAGGAACCGAAGTTATAAAAGAA
130 CG-GAAATAG-CTCGAAGGAATGGATCGTCTTG-AATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * *
11888851 TTCGTAAAACTTTGAAAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAA
192 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAA
** *
11888916 ATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
257 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* **
11888981 CGATTTC-CCATGCATGGAATGTTCGAGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTAC
322 CGATTTCTCGA-GCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTT
** *
11889044 AAGGAACTTAAGTTATAAATAAAAAGAACTCGTAAAA-TTTGAC
385 AAGGAACCGATG-T-T--AT-AAAAGAACTCGTAAAAGTTTGAC
** *
11889087 AAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCG
1 --------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCA
* * *
11889152 AAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTTCTTGATCATG
58 AAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATG
* * **
11889217 GAATGTTCGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTAAAGTTATAA
123 GAATGTTCG-GAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* * * *
11889282 AAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAGAGCCAAGAGACATATAATTCTCA
187 AAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* * *
11889347 TGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTT-C-AAATGACAACCTATTTGGACCAA
252 CGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTTGGACCAA
* * * * *
11889410 ATGATGCGATTTCTGGAGCATGGAATGTTCAAAAAATAGCTCAAAGGAATGGATCGTCATGAATA
316 ATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATA
* * *
11889475 CTTTAAGCAACCGGTGTTATAAAAGAAGTCGTAAAAGTTTGAC
381 CTTTAAGGAACCGATGTTATAAAAGAACTCGTAAAAGTTTGAC
* * * * *
11889518 AAGTTCATCCAAGAACAAAGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTCAACGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
* * * * * * * *
11889583 ACGCTGGTTA-AAAAAGACAAACTATTTGGTCTAAATGATGGGATTTCTCGAGCATGGAATGCTC
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
* * * * *
11889647 GGCAAATAGCTTGATGTAATGGATCGTCTTGAATACTTTAAGGAATCGAAGATATAAAAGAACTC
131 GG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
* * * * *
11889712 GTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGACAGACAATTCTCATGTAAATA
195 GTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATA
* * * **
11889777 AGTTTTTAACTCAAAGACCAAAAGCTGATTT-C-AAATGACAAAATATTTGGACCAAATGATTTG
260 AGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTTGGACCAAATGATGCG
* * * *
11889840 ATATCTCGAGCATGGAATGTTTGAAAAATAGCTCGAAGGAATGGATCGTCATGAATACTTTAAGG
324 ATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
* * *
11889905 AACCGAAGTTATAAACGAAGTCGTAAAAGTTTGAC
389 AACCGATGTTATAAAAGAACTCGTAAAAGTTTGAC
* * *
11889940 AAGTTCGTCCAAGAA-CAAGGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTCAACGACCA
1 AAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * ** * *
11890004 AAAGCTGGTTA-AAAATGACAAACTATTTGTTCCAAATGATGGGATTTAC-CGAGCATGGCATGC
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTT-CTCGAGCATGGAATG-
* *
11890067 TT-GGTAAATAGCTCGATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGATATAAAAGAA
128 TTCGG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * * *
11890131 CTCGTAAAAGTTTGACGAGTTCGAATGTTTGTCCAAGAACGAGGAGAGATACAATTCTCACGAAA
192 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAA
* * * * * *
11890196 AAAACTTTTTAATTCAATGACCAAGAGTTGTTTACAAAATGACAAACTATTTGAACCAAATGAAG
257 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* * * * *** ** *
11890261 CAATTT-TCTGTGCATGGAATGTTCGGGAAAT-GTCTCGAAGTAAACAATTATGTTGAATACTTT
322 CGATTTCTC-GAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTT
** *
11890324 AAGGAACATAAT-TTATAAAAGAACTCATAAAAGTTTGAC
385 AAGGAAC-CGATGTTATAAAAGAACTCGTAAAAGTTTGAC
* * *
11890363 AAGTTCGTCTAAGAACTATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
* * *
11890428 AAGTTATTTACAAAATGACAAACTCTTTGGACCAAATGATGCGATTTC-CCATGCATGGAATGTT
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTT
* * * * *
11890492 CGAGAAAT-GTCTCGAAGGAATTGATCATCTTGAATACTATATGGAACCAAAGTTATAAATAAAA
130 CG-GAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAG-T-T--ATAAAA
* * * * *
11890556 AAATTCGTAAAAATTTGACAAG-T------TT-G--GAAGTA-C------G-T--AATTCTCACG
189 GAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACG
** * *
11890601 TAAATAAGGATTTAATTCGAAGACCAAAAGTTTTTTACAAAATGACAAACTATTTGGACCAAATG
254 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * *
11890666 TTACGATTTCTCGAGCATGGAATGTTCGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTT
319 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* ** * * * *
11890731 TAAGGAACTGAACTAATAAAAGAACTCGTAATATTTTAACAAGTTCC
384 TAAGGAACCGATGTTATAAAAGAACTCGTAAAAGTTT-----G--AC
* * * ** * *
11890778 AAAGTTCGTCCAAGAACCAAGAGATAGACAATTCTCATGTAAATAAACTTTTAATTCAAATATCA
1 -AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
** *
11890843 AAAGCTAATTT-C-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
65 AAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * *
11890906 TCGAAATATAGCTCAAAGGAATGAATCGTCGTGAATACTTTAAGGAACCGAAATTATAAAAGAAG
129 TCGGAA-ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* *
11890971 TTGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAA-CAAGGAGAGATACAATTCTCATGTAA
193 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAA
* * * * * **
11891027 ATTAGTTTTTAATTGAATGACCAAAAGCTG-GTACAAAATGACAAACTATTTGCTCCAAATGATG
257 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* * * * *
11891091 AGATTTCTAGAGCATGGAATGCTCG-GTAATAGCTCGATGGAATGGATCGTCTTGAATACTTTAA
322 CGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAA
* * * *
11891155 GGAATCGAAGTTGTAAAAGAACTCGTAAAATTTTGACAAGTTCC
387 GGAACCGATGTTATAAAAGAACTCGTAAAAGTTTG---A----C
** *
11891199 AAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATATAAATAAGTTTTTAATTTAAAGACCA
1 -AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
11891264 AAAGTTGGTTAC-AAATGACAACCTATTTGGA-CAACATTATGCAATTTCTCGAGCATGGAATGC
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGT
* *** * *
11891327 TCGAAAAGTTTTTCGAAGGAATGGATAGTCTTGAATACTTGAAGGAACCGAAGTTATAAAAGAAC
129 TCGGAAA-TAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* ** * **
11891392 TCGTAAAAGTTTAATGAGTTCGAATA-TTTGTCCAAGAA-CAAGGAGAGATACAATTCTCACAAA
193 TCGTAAAAGTTTGACAAGTTCGAA-AGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTA
* * *
11891455 AATAAGTTTTTTAATTTAATGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATAA
256 AATAAG-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA
* * * * * * *
11891520 AGTGATTT-TCAGTGCATGGAATGTGTAG-GAAAT-GTCTTGAAGGAAAGGATCGTGTTGAATAC
320 TGCGATTTCTC-GAGCATGGAATGT-TCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATAC
** *
11891582 TTTAAACAACAG-TAGTTATAAAAGAACTCGTAAAAGTTTGAC
382 TTTAAGGAACCGAT-GTTATAAAAGAACTCGTAAAAGTTTGAC
* ** * * *
11891624 AAGTTCGTCCAAAAACCATTAGAGATACAATTTTCACGTAAATAACTTTTTAACTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
*
11891689 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC-CCATGCATGGAATGTT
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTT
* * *
11891753 CGAGAAAT-GTCTCGAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAAT
130 CG-GAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
11891817 TCGTCAAACTTTTAAAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
193 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
*
11891882 TAAGTTTTTAATTCGAAGACCAAAAGTT-TTTACAAAATGACAAACTATTTGGACCAAATGATGC
258 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * *
11891946 GATTTC-CCATGCATGGAATGTTCGAGAAAT-GTCTCGAAGGAATGGATCGTCTTAAATACTATA
323 GATTTCTCGA-GCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTA
* *
11892009 AGGAACTGAAGTTATAAATAAAAGAACTCGTAAGAA-TTTGAC
386 AGGAACCGATG-T-T--ATAAAAGAACTCGTAA-AAGTTTGAC
* ** *
11892051 AAGTTGGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATATGGATTTAATTCG
1 --------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCA
* *
11892116 AAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTAGAGCATG
58 AAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATG
* * * * * * *
11892181 GAGTGTTCGAAATATAGGTTGAAGTAATGGATCGTCTTGAATACATTAAGGAACTGAAGTTATAA
123 GAATGTTCGGAA-ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* * *
11892246 AAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGACAGACAATTCTCA
187 AAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* * *
11892311 TGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGATTT-C-AAATGACAACCTATTT-GACCAA
252 CGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTTGGACCAA
* * *
11892373 ATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTCGAAGGAATGGATCAT-TGTGAAT
316 ATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCT-TGAAT
* * *
11892437 ATTTTAAGGAACCTAAT-TTATAAAAGAAGTCGTAAAAGTTTGAC
380 ACTTTAAGGAACC-GATGTTATAAAAGAACTCGTAAAAGTTTGAC
* * * *
11892481 AAGTTCGTCCAAGAA-CAAGGAGAGAAACAATTCTCATGTAAATTAGTTTTTAATTCAACGACCA
1 AAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11892545 AAAGCTGGTTA-AAAATGACAAACTATTTGGTCCAAATGATAG-GATTTCCCGAGCATGGAATGC
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT-GCGATTTCTCGAGCATGGAATG-
* * *
11892608 TT-GGTAAATAGCTCGATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGATATAAATGAA
128 TTCGG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * ** *
11892672 CTCGTAAAAGTTTGACGAGTTCGAATGTTTGTCCAAGAATGAGGAGAGATACAATTCTCAC-TAA
192 CTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT-A
* * * * * *
11892736 AATAGGTTTTTATTTCAATGACCAAGAGTTGTTTACAAAATGACAAACTATTTGGCCCAAATGAA
256 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
* * * * * *
11892801 G-GAATTT-TCTGTGCATGGAATGTTCGGGAAAT-GTCTCGAAGTAAAGGATCATGTTGAATACT
321 GCG-ATTTCTC-GAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACT
** ** *
11892863 TTAAGGAACATAAATTATAAAAGAACTCATAAAAGTTTGAC
383 TTAAGGAACCGATGTTATAAAAGAACTCGTAAAAGTTTGAC
* * * * * *
11892904 AAGTTCGTCCAAGAACCATGAGAGATACAATTCCCACGTGAAT-GGTTTTTCACTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
* ** * * *
11892968 AATTTGTTTACAAAATGACAAACGCTTTGGACCAAATGATGCGAGTTC-CCATGCATGGAATGAT
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTT
* * *
11893032 CGAGAAAT-GTCTCGAAGGAATGGATTGTCTTGAATACTATATA-GAACCAAAGTTATAAATAAA
130 CG-GAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTA-AGGAACCGAAG-T-T--ATAAA
* * * * *
11893095 AGAATTCGTAAAAGTTTGACAAGTTTGGAAGTTCGTCCTAGAACCAAGAGAGACACAATTCTCAC
188 AGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCAC
** *
11893160 GTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTTACAAAATGAC-AACTATTTGGACCAAAT
253 GTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * *
11893224 GATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGAAGGAATGGATCATCTTGAATACT
318 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* *
11893289 TTAAGGAACTGATGTTATAAAAGAACTCATAAAAGTTTGACATGTTCC
383 TTAAGGAACCGATGTTATAAAAGAACTCGTAAAAGTTTG--A-----C
* * *
11893337 AAAGTTCGTCCAAGAACCAAGAGATACACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC-
1 -AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11893401 AAAGCTGATTT-C-AAATGACAACCTATTTGGACCAAATGATGCAATTTCTCGAGCATGGAATGT
65 AAAGTTG-TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * *
11893464 TTGAAATATAGCTCGAAGGATTGGATCGTCGTGAATACTTTAAAGAACCGAAGTTATAAAAGAAG
129 TCGGAA-ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* *
11893529 TCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAA-TAAGGAGAGATACAATTCTCATGTAA
193 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAA
* * * * *
11893585 ATTAGTTTTTAATTCAATGACCAAAAGCTG-GT---AAATGACAAACTATTTGGTCCAAATGATG
257 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* * * * *
11893646 AGATTTCTCGAGCATAGAATGCTCG-GTAAATAGCTCGATGGAAAGGATCGTCTTGAATACTTTA
322 CGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTA
*
11893710 AGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAC
386 AGGAACCGATGTTATAAAAGAACTCGTAAAAGTTTGAC
* ** *
11893748 AAGTTCCAAGTTCATCCAAGAACCAAGAGAGATATAATTCTCATATAAATAAGTTTTTAATTTAA
1 AAGTT-C--G----TCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAA
* * * * **
11893813 AGACCAAAAGTTGGTTA-AAAATGACAACCTATTTGGA-CAACATTATGCAATTTCTCGATTATG
59 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATG
* * *** * *
11893876 GAATGCTCGAAAAGTTTTTCGAAGGAATGGATAGTCATGAATACTTTAAGGAACCGAAGTTATAA
123 GAATGTTCGGAAA-TAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
** * * * *
11893941 AAGAACTCGTAAAAGTTTGATGAGTTCGAATGTTTGTCCAAGAACGAGGAGAGATACAATTCTCA
187 AAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* * *
11894006 CGAAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGATCAAA
252 CGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAA
* * * * * * * *
11894071 TGAAGTGATTT-TCAGTGCATGGAATGTTCGGGAAAT-GTCTTGAAGGAAAGGATCATGTTGAAT
317 TGATGCGATTTCTC-GAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAAT
** * *
11894134 ACTTTAAACAACAGAAGTTATAAAAGAACTCGTAAAAGTTTGAC
380 ACTTTAAGGAACCGATGTTATAAAAGAACTCGTAAAAGTTTGAC
** * *
11894178 AAGTTCGTCCAAGAACCATTAGAGATACAATTTTCACGTAAATAAGTTTTTAATTCATAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
11894243 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
11894291 CAGTGAATAA
Statistics
Matches: 4377, Mismatches: 628, Indels: 395
0.81 0.12 0.07
Matches are distributed among these distances:
407 2 0.00
408 139 0.03
409 3 0.00
410 8 0.00
411 23 0.01
413 8 0.00
414 3 0.00
415 84 0.02
416 64 0.01
417 69 0.02
418 227 0.05
420 16 0.00
421 478 0.11
422 732 0.17
423 623 0.14
424 212 0.05
425 151 0.03
426 172 0.04
427 127 0.03
428 28 0.01
429 68 0.02
430 176 0.04
431 56 0.01
432 66 0.02
433 84 0.02
434 117 0.03
435 369 0.08
436 113 0.03
437 157 0.04
438 2 0.00
ACGTcount: A:0.39, C:0.14, G:0.19, T:0.28
Consensus pattern (423 bp):
AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
GGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCG
TAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA
GTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGAT
TTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA
CCGATGTTATAAAAGAACTCGTAAAAGTTTGAC
Found at i:11892685 original size:421 final size:422
Alignment explanation
Indices: 11890591--11894290 Score: 3847
Period size: 421 Copynumber: 8.7 Consensus size: 422
11890581 GGAAGTACGT
** *
11890591 AATTCTCACGTAAATAAGGATTTAATTCGAA-GACCAAAAGTTTTTTACAAAATGACAAACTATT
1 AATTCTCACGTAAATAAGTTTTTAATTC-AATGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * ** * *
11890655 TGGACCAAATGTTACGATTTCTCGAGCATGGAATGTTCGAAAAATAGCTTGAAGGAATGGATCGT
65 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATAGCTCGAAGGAATGGATCAT
* * * * *
11890720 CTTGAATACTTTAAGGAA-CTGAACTAATAAAAGAACTCGTAATATTTTAACAAGTTCCAAAGTT
130 CTTGAATACTTTAAGGAACCT-AAGTTATAAAAGAACTCGTAAAAGTTT-----G--AC-AAGTT
* * ** * *
11890784 CGTCCAAGAACCAAGAGATAGACAATTCTCATGTAAATAAACTTTTAATTCAAATATCAAAAGCT
186 CGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAG-T
** * *
11890849 AATTT-CAAATGACAACCTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAAAT
250 TGTTTAAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAAA-
* * * * * *
11890913 ATAGCTCAAAGGAATGAATCGTCGTGAATACTTTAAGGAACCGAAATTATAAAAGAAGTTGTAAA
314 ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAA
11890978 AGTTTG---A---C--AAGTTCGTCCAAGAA-CAAGGAGAGATAC
379 AGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAA-GAGAGATAC
* * * * *
11891014 AATTCTCATGTAAATTAGTTTTTAATTGAATGACCAAAAGCTG-GTACAAAATGACAAACTATTT
1 AATTCTCACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTT
** * * * * * *
11891078 GCTCCAAATGATGAGATTTCTAGAGCATGGAATGCTC-GGTAATAGCTCGATGGAATGGATCGTC
66 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATAGCTCGAAGGAATGGATCATC
* * * *
11891142 TTGAATACTTTAAGGAATCGAAGTTGTAAAAGAACTCGTAAAATTTTGACAAGTTCCAAAGTTCG
131 TTGAATACTTTAAGGAACCTAAGTTATAAAAGAACTCGTAAAAGTTTG---A----C-AAGTTCG
* * *
11891207 TCCAAGAACCAAGAGAGATACAATTCTCATATAAATAAGTTTTTAATTTAAAGACCAAAAGTTGG
188 TCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * * * *
11891272 TTACAAATGACAACCTATTTGGA-CAACATTATGCAATTTCTCGAGCATGGAATGCTCGAAAAGT
253 TTAAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGAAAA-T
*** * *
11891336 TTTTCGAAGGAATGGATAGTCTTGAATACTTGAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG
316 AGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG
* ** *
11891401 TTTAATGAGTTCGAATA-TTTGTCCAAGAA-CAAGGAGAGATAC
381 TTTGACAAGTTCGAA-AGTTCGTCCAAGAACCAA-GAGAGATAC
** *
11891443 AATTCTCACAAAAATAAGTTTTTTAATTTAATGACCAAAAGTTGTTTACAAAATGACAAACTATT
1 AATTCTCACGTAAATAAG-TTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * * * * *
11891508 TGGACCAAATAAAGTGATTT-TCAGTGCATGGAATGTGT-AGGAAAT-GTCTTGAAGGAAAGGAT
65 TGGACCAAATGATGCGATTTCTC-GAGCATGGAATGT-TCGGGAAATAG-CTCGAAGGAATGGAT
* * ** *
11891570 CGTGTTGAATACTTTAAACAACAGT-AGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCC
127 CATCTTGAATACTTTAAGGAAC-CTAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCC
* ** * * * *
11891634 AAAAACCATTAGAGATACAATTTTCACGTAAATAACTTTTTAACTCAAAGACCAAAAGTTGTTTA
191 AAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTA
*
11891699 CAAAATGACAAACTATTTGGACCAAATGATGCGATTTC-CCATGCATGGAATGTTCGAGAAAT-G
256 -AAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGA-AAATAG
* * * * *
11891762 TCTCGAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAATTCGTCAAACT
318 -CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGT
* * * *
11891827 TTTAAAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGATAC
382 TTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATAC
11891868 AATTCTCACGTAAATAAGTTTTTAATTCGAA-GACCAAAAGTT-TTTACAAAATGACAAACTATT
1 AATTCTCACGTAAATAAGTTTTTAATTC-AATGACCAAAAGTTGTTTACAAAATGACAAACTATT
* *
11891931 TGGACCAAATGATGCGATTTC-CCATGCATGGAATGTTCGAGAAAT-GTCTCGAAGGAATGGATC
65 TGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGGGAAATAG-CTCGAAGGAATGGATC
* * *
11891994 GTCTTAAATACTATAAGGAA-CTGAAGTTATAAATAAAAGAACTCGTAAGAA-TTTGACAAGTTG
128 ATCTTGAATACTTTAAGGAACCT-AAG-T-T--ATAAAAGAACTCGTAA-AAGTTTGAC------
* * ** *
11892057 GGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATATGGATTTAATTCGAAGACC
181 --AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC
* * *
11892122 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTAGAGCATGGAGTGT
244 AAAAGTTGTTTA-AAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * *
11892187 TCGAAATATAGGTTGAAGTAATGGATCGTCTTGAATACATTAAGGAACTGAAGTTATAAAAGAAC
308 TCGAAA-ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * *
11892252 TCGTAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGACAGAC
372 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATAC
* * * *
11892303 AATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGATTT-C-AAATGACAACCTATT
1 AATTCTCACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTG-TTTACAAAATGACAAACTATT
***
11892366 T-GACCAAATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTCGAAGGAATGGATCAT
65 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATAGCTCGAAGGAATGGATCAT
* * *
11892430 -TGTGAATATTTTAAGGAACCTAATTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCGTCCAAG
130 CT-TGAATACTTTAAGGAACCTAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAG
* * * * *
11892494 AA-CAAGGAGAGAAACAATTCTCATGTAAATTAGTTTTTAATTCAACGACCAAAAGCTGGTTAAA
194 AACCAA-GAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTAAA
* * * *
11892558 AATGACAAACTATTTGGTCCAAATGATAG-GATTTCCCGAGCATGGAATGCTTGGTAAATAGCTC
258 AATGACAAACTATTTGGACCAAATGAT-GCGATTTCTCGAGCATGGAATG-TTCGAAAATAGCTC
* * *
11892622 GATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGATATAAATGAACTCGTAAAAGTTTGA
321 GAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA
* * * ** *
11892687 CGAGTTCGAATGTTTGTCCAAGAATGAGGAGAGATAC
386 CAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATAC
* * *
11892724 AATTCTCAC-TAAAATAGGTTTTTATTTCAATGACCAAGAGTTGTTTACAAAATGACAAACTATT
1 AATTCTCACGT-AAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATT
* * * * *
11892788 TGGCCCAAATGAAG-GAATTT-TCTGTGCATGGAATGTTCGGGAAAT-GTCTCGAAGTAAAGGAT
65 TGGACCAAATGATGCG-ATTTCTC-GAGCATGGAATGTTCGGGAAATAG-CTCGAAGGAATGGAT
* * * *
11892850 CATGTTGAATACTTTAAGGAACATAAATTATAAAAGAACTCATAAAAGTTTGACAAGTTCGTCCA
127 CATCTTGAATACTTTAAGGAACCTAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCA
* * * * * * * *
11892915 AGAACCATGAGAGATACAATTCCCACGTGAAT-GGTTTTTCACTCAAAGACCAAAATTTGTTTAC
192 AGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTA-
** * * *
11892979 AAAATGACAAACGCTTTGGACCAAATGATGCGAGTTC-CCATGCATGGAATGATCGAGAAAT-GT
256 AAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATGTTCGA-AAATAG-
* * * *
11893042 CTCGAAGGAATGGATTGTCTTGAATACTATATA-GAACCAAAGTTATAAATAAAAGAATTCGTAA
318 CTCGAAGGAATGGATCGTCTTGAATACTTTA-AGGAACCGAAG-T-T--ATAAAAGAACTCGTAA
* * * *
11893106 AAGTTTGACAAGTTTGGAAGTTCGTCCTAGAACCAAGAGAGACAC
378 AAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATAC
**
11893151 AATTCTCACGTAAATAAGGATTTAATTCGAA-GACCAAAAGTTGTTTACAAAATGAC-AACTATT
1 AATTCTCACGTAAATAAGTTTTTAATTC-AATGACCAAAAGTTGTTTACAAAATGACAAACTATT
*** *
11893214 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGAAGGAATGGATCAT
65 TGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATAGCTCGAAGGAATGGATCAT
* *
11893279 CTTGAATACTTTAAGGAA-CTGATGTTATAAAAGAACTCATAAAAGTTTGACATGTTCCAAAGTT
130 CTTGAATACTTTAAGGAACCT-AAGTTATAAAAGAACTCGTAAAAGTTTG--A-----C-AAGTT
* * *
11893343 CGTCCAAGAACCAAGAGATACACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC-AAAGCT
186 CGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* * * *
11893407 GATTT-CAAATGACAACCTATTTGGACCAAATGATGCAATTTCTCGAGCATGGAATGTTTGAAAT
251 G-TTTAAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAAA-
* * * *
11893471 ATAGCTCGAAGGATTGGATCGTCGTGAATACTTTAAAGAACCGAAGTTATAAAAGAAGTCGTAAA
314 ATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAA
*
11893536 AGTTTG---A---C--AAGTTCGTCCAAGAA-TAAGGAGAGATAC
379 AGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAA-GAGAGATAC
* * * *
11893572 AATTCTCATGTAAATTAGTTTTTAATTCAATGACCAAAAGCTG-GT---AAATGACAAACTATTT
1 AATTCTCACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * * * * * *
11893633 GGTCCAAATGATGAGATTTCTCGAGCATAGAATGCTCGGTAAATAGCTCGATGGAAAGGATCGTC
66 GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATAGCTCGAAGGAATGGATCATC
*
11893698 TTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAGTTCAT
131 TTGAATACTTTAAGGAACCTAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C--G----T
* * * *
11893763 CCAAGAACCAAGAGAGATATAATTCTCATATAAATAAGTTTTTAATTTAAAGACCAAAAGTTGGT
189 CCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTT
* * * ** * *
11893828 TAAAAATGACAACCTATTTGGA-CAACATTATGCAATTTCTCGATTATGGAATGCTCGAAAAGTT
254 TAAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGGAATGTTCGAAAA-TA
** * *
11893892 TTTCGAAGGAATGGATAGTCATGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGT
317 GCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGT
** * * * *
11893957 TTGATGAGTTCGAATGTTTGTCCAAGAACGAGGAGAGATAC
382 TTGACAAGTTCGAAAGTTCGTCCAAGAACCAAGAGAGATAC
*
11893998 AATTCTCACGAAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTT
1 AATTCTCACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTT
* * * * * *
11894063 GGATCAAATGAAGTGATTT-TCAGTGCATGGAATGTTCGGGAAAT-GTCTTGAAGGAAAGGATCA
66 GGACCAAATGATGCGATTTCTC-GAGCATGGAATGTTCGGGAAATAG-CTCGAAGGAATGGATCA
* ** **
11894126 TGTTGAATACTTTAAACAACAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAG
129 TCTTGAATACTTTAAGGAACCTAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAG
** * * *
11894191 AACCATTAGAGATACAATTTTCACGTAAATAAGTTTTTAATTCATAGACCAAAAGTTGTTTACAA
194 AACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTA-AA
11894256 AATGACAAACTATTTGGACCAAATGATGCGATTTC
258 AATGACAAACTATTTGGACCAAATGATGCGATTTC
11894291 CAGTGAATAA
Statistics
Matches: 2751, Mismatches: 389, Indels: 273
0.81 0.11 0.08
Matches are distributed among these distances:
410 5 0.00
411 2 0.00
413 1 0.00
416 2 0.00
417 64 0.02
418 221 0.08
419 1 0.00
420 16 0.01
421 467 0.17
422 170 0.06
423 388 0.14
424 125 0.05
425 154 0.06
426 170 0.06
427 125 0.05
428 6 0.00
429 68 0.02
430 162 0.06
431 47 0.02
432 66 0.02
433 84 0.03
434 118 0.04
435 283 0.10
436 3 0.00
437 3 0.00
ACGTcount: A:0.39, C:0.14, G:0.19, T:0.28
Consensus pattern (422 bp):
AATTCTCACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACAAACTATTT
GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAATAGCTCGAAGGAATGGATCATC
TTGAATACTTTAAGGAACCTAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAA
CCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTAAAAAT
GACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAAAATAGCTCGAAGG
AATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGT
TCGAAAGTTCGTCCAAGAACCAAGAGAGATAC
Found at i:11894425 original size:165 final size:165
Alignment explanation
Indices: 11894151--11894455 Score: 479
Period size: 165 Copynumber: 1.8 Consensus size: 165
11894141 ACAACAGAAG
* ** * *
11894151 TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCATTAGAGATACAATTTTCACG
1 TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACAAGGAGAGATACAATTCTAACG
* *
11894216 TAAATAAGTTTTTAATTCATAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
66 TAAATAAGTTTTTAATTCATAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATG
11894281 ATGCGATTTCCAGTGAATAATTTAAGGAAGCGAAA
131 ATGCGATTTCCAGTGAATAATTTAAGGAAGCGAAA
* *
11894316 TTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCGTCCAAGAACAAGGAGAGATACAATTCTAATG
1 TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACAAGGAGAGATACAATTCTAACG
* *
11894381 TAAATTAGTTTTTTAATTCATCA-ACCAAAAGCTGGTTA-AAAATGACAAACTATTTGGTCCAAA
66 TAAATAAG-TTTTTAATTCAT-AGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAA
11894444 TGATGCGATTTC
129 TGATGCGATTTC
11894456 TCCAGCATGG
Statistics
Matches: 127, Mismatches: 11, Indels: 4
0.89 0.08 0.03
Matches are distributed among these distances:
165 101 0.80
166 25 0.20
167 1 0.01
ACGTcount: A:0.41, C:0.14, G:0.16, T:0.30
Consensus pattern (165 bp):
TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACAAGGAGAGATACAATTCTAACG
TAAATAAGTTTTTAATTCATAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATG
ATGCGATTTCCAGTGAATAATTTAAGGAAGCGAAA
Found at i:11895066 original size:208 final size:207
Alignment explanation
Indices: 11894294--11896117 Score: 1747
Period size: 208 Copynumber: 8.7 Consensus size: 207
11894284 CGATTTCCAG
* * *
11894294 TGAATAATTTAAGGAAGCGAAA-TTATAAAAGAAGTCGTAAAAGTTTGACAAGTTCGTCCAAGAA
1 TGAATACTTTAAGGAA-CCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAA
* * * * * * *
11894358 CAAGGAGAGATACAATTCTAATGTAAATTAGTTTTTTAATTCATCA-ACCAAAAGCTGGTTA-AA
65 CCAGGAGAGATACAATTCTCACGTAAATAAG-TTTTTAATTCA-AAGACCAAAAGTTGTTTACAA
* * * *
11894421 AATGACAAACTATTTGGTCCAAATGATGCGATTTCTCCAGCATGGAATGCTCGGTAAATAG-CTT
128 AATGACAAACTATTTGGACCAAATGATGCGATTT-TCCAGCATGGAATGTTCGGGAAAT-GTCTC
*
11894485 GATGGAAAGGATCGTCT
191 GAAGGAAAGGATCGTCT
*
11894502 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTACGT
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-T------T-CGT
* ** * * *
11894567 CCAAGAACCAAGAGAGATACAATTCTCATATAAATAA-TTTTTAATTTAAAGACCAAAAGCTGGT
58 CCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTT
** * * *
11894631 TAC-AGTTGACAACCTATTTGGA-CAACATGATGCGATTTCTCGAGCATGGAATGCTC-GGAAAG
123 TACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTT-TCCAGCATGGAATGTTCGGGAAA-
* * * * *
11894693 TTTTTCGATGGAATGGATAGTCT
185 TGTCTCGAAGGAAAGGATCGTCT
* *
11894716 TGAATATTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACGAGTTCGAATGTTTGT
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTT---GA---C-AA-GTTCGT
* ** ** * *
11894781 CCAAGAACGAGGAGAGATACAGCTCTCACAAAAATAAGTTTTTAATTCAATGACCAAAAGTTATT
58 CCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTT
* * *
11894846 TACAAAATGACAAACTATTTGGATCAAATGAAGCGATTTTCTATGCATGGAATGTTCGGGAAATG
123 TACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTCCA-GCATGGAATGTTCGGGAAATG
* * *
11894911 TCTTGTAGGAAAGGATCGTGT
187 TCTCGAAGGAAAGGATCGTCT
** ** *
11894932 TGAATACTTTAAACAATAAAAGTTATAAAAGAACTCATAAAAGTTTGACAAGTTCGTCCAAGAAC
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAAC
** * *
11894997 CATTAGAGATACAATTTTCACGTAAATAAGTTTTTAATTCATAGACCAAAAGTTGTTTACAAAAT
66 CAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAAT
* *
11895062 GACAAACTATTTGGACCAAATGATGCGATTTCCCATGCATGGAATGTTCGAGAAATGTCTCGAAG
131 GACAAACTATTTGGACCAAATGATGCGATTTTCCA-GCATGGAATGTTCGGGAAATGTCTCGAAG
*
11895127 GAATGGATCGTCT
195 GAAAGGATCGTCT
* * * * * * * * *
11895140 TGTATACTATAACGAACCGAAGTTATATAAGAATTCATAAAAATTTGAAAGTTTGGAAGTTCGTC
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTG--A-----CAAGTTCGTC
* ** *
11895205 CAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTTT
59 CAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTT
* * * *** *
11895270 AGAAAATGACAAACTATTTGGACCAAATGATGTGATTTCCCGAGCATGGAATGCTT-TAAAAATA
124 ACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTCC-AGCATGGAATG-TTCGGGAAATG
* * * *
11895334 ACTTGAAGGAATGGATCGTCA
187 TCTCGAAGGAAAGGATCGTCT
* * * * * * *
11895355 TGAATACTTTAAGGAAGCAAAATTATAAAAGAAGTCATAAAAGTTTGATAAGTTCATCCAAGAAT
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAAC
* * * * * * * *
11895420 AAGGAGAGATACAATTCTCATGTAAATTAGTTTTCAATTCAACA-ATCAAAAGCTGGTTA-AACA
66 CAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAA-AGACCAAAAGTTGTTTACAAAA
* * * * **
11895483 TGACAAACTATTTGGTCCAAATGATGCGATTTTTCGAGTATGGAATGCTCGATAAATAG-CTCGA
130 TGACAAACTATTTGGACCAAATGATGCGA-TTTTCCAGCATGGAATGTTCGGGAAAT-GTCTCGA
* *
11895547 TGGAATGGATCGTCT
193 AGGAAAGGATCGTCT
* *
11895562 TGAGTACTCTAAGGAACCAAAGTTATAAAAGAACTCGT-AAAGTTTGACAAGTTGGGAAGTTCGT
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAC--------AAGTTCGT
* * * * *
11895626 CAAAGAACGAGGAGAGATTA-TATTCTCATGTAAATAAGTTTTTAATTCAAAGCCCAAAAGTTGT
58 CCAAGAACCAGGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * *
11895690 TTACAATATGACAAACAATTTGGACCAAATGATGCGA-CTTCCAGAGCATGGAATGTTCGGGAAA
122 TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTCC--AGCATGGAATGTTCGGGAAA
* *
11895754 TATCTCGAAGGAAAGGTTCGTCT
185 TGTCTCGAAGGAAAGGATCGTCT
* ** *
11895777 TGGATACTTTAAGGAA-TGAAGTTATAAAAGAACTC-----A---T-AAAAGTTCGTCCAAGAAC
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAAC
* *
11895832 CATGAGAGATACAATTCTCACGTAAATAAGCTTTTAATTCAAAGACCAAAAGTTGTTTACAAAAT
66 CAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAAT
* * ***
11895897 GACAAACTATTTAGACCAAATGAAGCGATTTTTTGTGCATGGAATGTTCGGGAAATGTCTCGAAG
131 GACAAACTATTTGGACCAAATGATGCGA-TTTTCCAGCATGGAATGTTCGGGAAATGTCTCGAAG
*
11895962 GAAAGGATCGTGT
195 GAAAGGATCGTCT
* * *
11895975 TGAATACTTTAAGCAA-CAGAAGTTAGAAAAGAACTCGTAAAAGTTTGACAAGTTCATCCAAGAA
1 TGAATACTTTAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAA
** * * * **
11896039 CCATTAGAGATGCAATTTTTACGTAAATAAGTTTTTAATTCAAAGATAAAAAGTTGTTTACAAAA
65 CCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAA
11896104 TGACAAACTATTTG
130 TGACAAACTATTTG
11896118 AGTGAAATGA
Statistics
Matches: 1340, Mismatches: 209, Indels: 134
0.80 0.12 0.08
Matches are distributed among these distances:
197 2 0.00
198 148 0.11
199 16 0.01
200 2 0.00
204 1 0.00
206 11 0.01
207 99 0.07
208 367 0.27
209 4 0.00
210 3 0.00
213 15 0.01
214 239 0.18
215 286 0.21
216 132 0.10
217 10 0.01
220 1 0.00
221 3 0.00
222 1 0.00
ACGTcount: A:0.39, C:0.14, G:0.19, T:0.28
Consensus pattern (207 bp):
TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAAC
CAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAAT
GACAAACTATTTGGACCAAATGATGCGATTTTCCAGCATGGAATGTTCGGGAAATGTCTCGAAGG
AAAGGATCGTCT
Found at i:11895685 original size:422 final size:423
Alignment explanation
Indices: 11894294--11896117 Score: 1911
Period size: 422 Copynumber: 4.4 Consensus size: 423
11894284 CGATTTCCAG
* * *
11894294 TGAATAATTTAAGGAAGCGAAA-TTATAAAAGAAGTCGTAAAAGTTTGAC-------AAGTTCGT
1 TGAATACTTTAAGGAA-CCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTGGAAGTTCGT
* * * * * *
11894351 CCAAGAACAAGGAGAGATACAATTCTAATGTAAATTAGTTTTTTAATTCATCA-ACCAAAAGCTG
65 CCAAGAACGAGGAGAGATACAATTCTCACGTAAATAAG-TTTTTAATTCA-AAGACCAAAAGTTG
* * * *
11894415 GTTA-AAAATGACAAACTATTTGGTCCAAATGATGCGATTTCTCC-AGCATGGAATGCTCGGTAA
128 TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC-CCGAGCATGGAATGTTCGGGAA
* * * * * *
11894478 ATAGCTTGATGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAA
192 ATATCTTGAAGGAAAGGATCGTCTTGAATACTTTAAGGAAGCAAAATTATAAAAGAACTCATAAA
**
11894543 AGTTTGACAAGTTCCAAAGTACGTCCAAGAACCAA-GAGAGATACAATTCTCATATAAATAA-TT
257 AGTTTGACAAGTT-C-----A--TCCAAGAA-CAATGAGAGATACAATTCTCACGTAAATAAGTT
* ** *
11894606 TTTAATTTAAAGACCAAAAGCTGGTTAC-AGTTGACAACCTATTTGGA-CAACATGATGCGATTT
313 TTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTT
* * * * *
11894669 CTCGAGCATGGAATGCTCG-GAAAGTTTTTCGATGGAATGGATAGTCT
377 TTCGAGCATGGAATGCTCGAGAAA-TGTCTCGAAGGAATGGATCGTCT
* * * *
11894716 TGAATATTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACGAGTTCGAATGTTTGT
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTGGAA-GTTCGT
** ** * *
11894781 CCAAGAACGAGGAGAGATACAGCTCTCACAAAAATAAGTTTTTAATTCAATGACCAAAAGTTATT
65 CCAAGAACGAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTT
* * * *
11894846 TACAAAATGACAAACTATTTGGATCAAATGAAGCGATTT-TCTATGCATGGAATGTTCGGGAAAT
130 TACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGA-GCATGGAATGTTCGGGAAAT
* * * ** *
11894910 GTCTTGTAGGAAAGGATCGTGTTGAATACTTTAAACAA-TAAAAGTTATAAAAGAACTCATAAAA
194 ATCTTGAAGGAAAGGATCGTCTTGAATACTTTAAGGAAGCAAAA-TTATAAAAGAACTCATAAAA
* * * * *
11894974 GTTTGACAAGTTCGTCCAAGAACCATTAGAGATACAATTTTCACGTAAATAAGTTTTTAATTCAT
258 GTTTGACAAGTTCATCCAAGAACAATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAA
* * * *
11895039 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGA-TTTCCCATGCATG
323 AGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTTCGA-GCATG
*
11895103 GAATGTTCGAGAAATGTCTCGAAGGAATGGATCGTCT
387 GAATGCTCGAGAAATGTCTCGAAGGAATGGATCGTCT
* * * * * * * *
11895140 TGTATACTATAACGAACCGAAGTTATATAAGAATTCATAAAAATTTGA-AAGTTTGGAAGTTCGT
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTGGAAGTTCGT
* * ** *
11895204 CCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAGACCAAAAGTTGTT
65 CCAAGAACGAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTT
* * ***
11895269 TAGAAAATGACAAACTATTTGGACCAAATGATGTGATTTCCCGAGCATGGAATGCTT-TAAAAAT
130 TACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATG-TTCGGGAAAT
* * * *
11895333 AACTTGAAGGAATGGATCGTCATGAATACTTTAAGGAAGCAAAATTATAAAAGAAGTCATAAAAG
194 ATCTTGAAGGAAAGGATCGTCTTGAATACTTTAAGGAAGCAAAATTATAAAAGAACTCATAAAAG
* * * * * *
11895398 TTTGATAAGTTCATCCAAGAATAAGGAGAGATACAATTCTCATGTAAATTAGTTTTCAATTCAAC
259 TTTGACAAGTTCATCCAAGAACAATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAA-
* * * *
11895463 A-ATCAAAAGCTGGTTA-AACATGACAAACTATTTGGTCCAAATGATGCGATTTTTCGAGTATGG
323 AGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTTCGAGCATGG
* *
11895526 AATGCTCGATAAATAG-CTCGATGGAATGGATCGTCT
388 AATGCTCGAGAAAT-GTCTCGAAGGAATGGATCGTCT
* *
11895562 TGAGTACTCTAAGGAACCAAAGTTATAAAAGAACTCGT-AAAGTTTGACAAGTTGGGAAGTTCGT
1 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-GGAAGTTCGT
* * * *
11895626 CAAAGAACGAGGAGAGATTA-TATTCTCATGTAAATAAGTTTTTAATTCAAAGCCCAAAAGTTGT
65 CCAAGAACGAGGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * * *
11895690 TTACAATATGACAAACAATTTGGACCAAATGATGCGACTTCCAGAGCATGGAATGTTCGGGAAAT
129 TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGGGAAAT
* * * *
11895755 ATCTCGAAGGAAAGGTTCGTCTTGGATACTTTAAGGAATG--AAGTTATAAAAGAACTCATAAAA
194 ATCTTGAAGGAAAGGATCGTCTTGAATACTTTAAGGAA-GCAAAATTATAAAAGAACTCATAAAA
* *
11895818 G-TT--C--G----TCCAAGAACCATGAGAGATACAATTCTCACGTAAATAAGCTTTTAATTCAA
258 GTTTGACAAGTTCATCCAAGAACAATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAA
* * * * * *
11895874 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGAAGCGATTTTTTGTGCATGG
323 AGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTTCGAGCATGG
* * * *
11895939 AATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTGT
388 AATGCTCGAGAAATGTCTCGAAGGAATGGATCGTCT
* * *
11895975 TGAATACTTTAAGCAA-CAGAAGTTAGAAAAGAACTCGTAAAAGTTTGAC-------AAGTTCAT
1 TGAATACTTTAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTGGAAGTTCGT
* ** * * * **
11896032 CCAAGAACCATTAGAGATGCAATTTTTACGTAAATAAGTTTTTAATTCAAAGATAAAAAGTTGTT
65 CCAAGAACGAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTT
11896097 TACAAAATGACAAACTATTTG
130 TACAAAATGACAAACTATTTG
11896118 AGTGAAATGA
Statistics
Matches: 1167, Mismatches: 197, Indels: 92
0.80 0.14 0.06
Matches are distributed among these distances:
405 1 0.00
406 77 0.07
411 1 0.00
412 59 0.05
413 99 0.08
414 10 0.01
416 1 0.00
420 2 0.00
421 40 0.03
422 318 0.27
423 264 0.23
424 110 0.09
425 7 0.01
428 1 0.00
429 29 0.02
430 148 0.13
ACGTcount: A:0.39, C:0.14, G:0.19, T:0.28
Consensus pattern (423 bp):
TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTGGAAGTTCGTC
CAAGAACGAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTT
ACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGGGAAATAT
CTTGAAGGAAAGGATCGTCTTGAATACTTTAAGGAAGCAAAATTATAAAAGAACTCATAAAAGTT
TGACAAGTTCATCCAAGAACAATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGA
CCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTTCGAGCATGGAAT
GCTCGAGAAATGTCTCGAAGGAATGGATCGTCT
Found at i:11895960 original size:198 final size:199
Alignment explanation
Indices: 11895618--11896116 Score: 624
Period size: 198 Copynumber: 2.5 Consensus size: 199
11895608 ACAAGTTGGG
* * * * * *
11895618 AAGTTCGTCAAAGAACGAGGAGAGATTA-TATTCTCATGTAAATAAGTTTTTAATTCAAAGCCCA
1 AAGTTCGTCCAAGAACCATGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11895682 AAAGTTGTTTACAATATGACAAACAATTTGGACCAAATGATGCGACTTCCAGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGAAGCGACTTCCAGAGCATGGAATGTT
* * * * *
11895747 CGGGAAATATCTCGAAGGAAAGGTTCGTCTTGGATACTTTAAGGAA-TGAAGTTATAAAAGAACT
130 CGGGAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGCAACAGAAGTTAGAAAAGAACT
11895811 CATAA
195 CATAA
*
11895816 AAGTTCGTCCAAGAACCATGAGAGATACAATTCTCACGTAAATAAGCTTTTAATTCAAAGACCAA
1 AAGTTCGTCCAAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
* *** *
11895881 AAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGAAGCGATTTTTTGTGCATGGAATGTTC
66 AAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGAAGCGACTTCCAGAGCATGGAATGTTC
* *
11895946 GGGAAATGTCTCGAAGGAAAGGATCGTGTTGAATACTTTAAGCAACAGAAGTTAGAAAAGAACTC
131 GGGAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGCAACAGAAGTTAGAAAAGAACTC
*
11896011 GTAA
196 ATAA
* * * *
11896015 AAGTTTGACAAGTTCATCCAAGAACCATTAGAGATGCAATTTTTACGTAAATAAGTTTTTAATTC
1 AAG-TT--C--G----TCCAAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTC
**
11896080 AAAGATAAAAAGTTGTTTACAAAATGACAAACTATTT
57 AAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
11896117 GAGTGAAATG
Statistics
Matches: 259, Mismatches: 31, Indels: 12
0.86 0.10 0.04
Matches are distributed among these distances:
197 2 0.01
198 151 0.58
199 23 0.09
200 2 0.01
202 1 0.00
204 1 0.00
208 79 0.31
ACGTcount: A:0.39, C:0.14, G:0.18, T:0.28
Consensus pattern (199 bp):
AAGTTCGTCCAAGAACCATGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
AAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGAAGCGACTTCCAGAGCATGGAATGTTC
GGGAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGCAACAGAAGTTAGAAAAGAACTC
ATAA
Found at i:11896890 original size:217 final size:215
Alignment explanation
Indices: 11896405--11897166 Score: 897
Period size: 216 Copynumber: 3.6 Consensus size: 215
11896395 GATAGGAACC
* * * *
11896405 AAAGGTTGACAAGTTTGAAAGTTCGTCTAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGG
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGT
* * * *
11896470 ATTTAATTCGAAGGCCAAAAGTTGTTTACAAAATGACAAACTATTTAGACCAAATGATGAGATTT
66 TTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTT
* ** * *
11896535 CTCGAGCATGGAATGTTCGAAAAATAGCTTTAAGGAATGGATCATCTTGAATACTTTAAGGAACT
131 CTCGAGCATGGAATGTTCG-AAAATTGCTCAAAGGAATAGATCATCTTGAATACTTTAAGGAACC
11896600 GAAGTTATAAAAGAACTCGTA
195 GAAGTTATAAAAGAACTCGTA
* * * *
11896621 AAAGTCTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGT
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGT
* * * * *
11896686 TTTTAAATTCAAAAAACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAATGATGCGAT
66 TTTT-AATTC-AAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGAT
* * * * * *
11896750 TTATTGAGCCTGGAATGCTCTGAAAATTGCTCGAAGGAATAGATCATCTT-TATACTTTAAGGAA
129 TTCTCGAGCATGGAATGTTC-GAAAATTGCTCAAAGGAATAGATCATCTTGAATACTTTAAGGAA
11896814 CCGAAGTTATAAAAGAACTCGTA
193 CCGAAGTTATAAAAGAACTCGTA
** *
11896837 AAAGTTTGACAAGTTCGAAAGTTTATTCCAAGAACCAGGAGAGACACAATTCTCACGTAAATAAG
1 AAAGTTTGACAAGTTCGAAAG-TTCGTCCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAG
** * * * *
11896902 TTTCGAATTCAATGACCAAAAGTTGTTTACAAAATGATAAACTATTTGGACCAAATGAAGTGATT
65 TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATT
* * * * * * *
11896967 TCTCGTGTATGGACTGTTCGGGAAA-TGTCTCAAAGGAA-AGATCGTGTTGAATACTTGAAGGAA
130 TCTCGAGCATGGAATGTTC-GAAAATTG-CTCAAAGGAATAGATCATCTTGAATACTTTAAGGAA
* *
11897030 CCGGAGTTGT-AAAGAACTCGTA
193 CCGAAGTTATAAAAGAACTCGTA
*
11897052 AAAGTTGGACAAG-T------TT-GTCCAAGAACCTA--AGAGATACAATTCTCACGTAAATAAG
1 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACC-AGGAGAGATACAATTCTCACGTAAATAAG
* **
11897107 TTTTTAATTCAAAGATCAAAAGTTGTTTACAAAATGACAAACTATTTGGATGAAATGATG
65 TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
11897167 TGAAAGTATT
Statistics
Matches: 467, Mismatches: 71, Indels: 27
0.83 0.13 0.05
Matches are distributed among these distances:
205 77 0.16
206 10 0.02
207 3 0.01
214 1 0.00
215 50 0.11
216 194 0.42
217 116 0.25
218 16 0.03
ACGTcount: A:0.39, C:0.14, G:0.19, T:0.28
Consensus pattern (215 bp):
AAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGT
TTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGAGATTT
CTCGAGCATGGAATGTTCGAAAATTGCTCAAAGGAATAGATCATCTTGAATACTTTAAGGAACCG
AAGTTATAAAAGAACTCGTA
Found at i:11898147 original size:32 final size:32
Alignment explanation
Indices: 11898111--11898173 Score: 99
Period size: 32 Copynumber: 2.0 Consensus size: 32
11898101 GCCATCCATA
* *
11898111 CATGTACCTGAAATATATTAATCAGCTAATTG
1 CATGTACCTGAAACACATTAATCAGCTAATTG
*
11898143 CATGTACCTGAAACACATTAATTAGCTAATT
1 CATGTACCTGAAACACATTAATCAGCTAATT
11898174 AATTTCAGCT
Statistics
Matches: 28, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
32 28 1.00
ACGTcount: A:0.38, C:0.17, G:0.11, T:0.33
Consensus pattern (32 bp):
CATGTACCTGAAACACATTAATCAGCTAATTG
Found at i:11898262 original size:39 final size:39
Alignment explanation
Indices: 11898219--11898317 Score: 171
Period size: 39 Copynumber: 2.5 Consensus size: 39
11898209 TTAATTTGTC
* *
11898219 TCAAACTTAGACACCTTAAAAACAACTATTAAATATGTA
1 TCAAACTAAGACACATTAAAAACAACTATTAAATATGTA
*
11898258 TCAAAATAAGACACATTAAAAACAACTATTAAATATGTA
1 TCAAACTAAGACACATTAAAAACAACTATTAAATATGTA
11898297 TCAAACTAAGACACATTAAAA
1 TCAAACTAAGACACATTAAAA
11898318 CCTTATTTAA
Statistics
Matches: 56, Mismatches: 4, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
39 56 1.00
ACGTcount: A:0.54, C:0.16, G:0.05, T:0.25
Consensus pattern (39 bp):
TCAAACTAAGACACATTAAAAACAACTATTAAATATGTA
Found at i:11901381 original size:28 final size:29
Alignment explanation
Indices: 11901341--11901410 Score: 69
Period size: 28 Copynumber: 2.5 Consensus size: 29
11901331 TTTCTATCTC
*
11901341 TTTT-TCTTCCTTTTCATCTTTT-T-TC-T
1 TTTTCTCTTTCTTTTC-TCTTTTCTCTCAT
*
11901367 TTTCTCTCTTTCTTTGCTCTTTTCTCTCAT
1 TTT-TCTCTTTCTTTTCTCTTTTCTCTCAT
11901397 TTTTC-CTTTCTTTT
1 TTTTCTCTTTCTTTT
11901411 TTTCAATTTT
Statistics
Matches: 36, Mismatches: 3, Indels: 8
0.77 0.06 0.17
Matches are distributed among these distances:
26 3 0.08
27 7 0.19
28 18 0.50
29 4 0.11
30 4 0.11
ACGTcount: A:0.03, C:0.26, G:0.01, T:0.70
Consensus pattern (29 bp):
TTTTCTCTTTCTTTTCTCTTTTCTCTCAT
Found at i:11904914 original size:215 final size:216
Alignment explanation
Indices: 11904537--11908452 Score: 4014
Period size: 215 Copynumber: 18.5 Consensus size: 216
11904527 AAAGTTTGAC
* * ** *
11904537 AAGTTCGTCCTAGAACCTAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAATGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* *
11904602 AAG-TAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGTGCATGGAATGTT
66 AAGCT-GGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * *
11904666 C-GAAAAGTAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGATGTTATAAAAGAAC
130 CGGAAAATTA-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAAC
*
11904730 TCGTAAAAGTTTTACAAGTTCCA
194 TCGTAAAAGTTTGACAAGTTCCA
* *
11904753 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACGAG
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* * * *
11904818 AAGCTGGTTAC-AAATGACAACCTATTTGGACCAAATGATGCAATTTCTAGAGCATGGAATGCTC
66 AAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
* * ** *
11904882 GGAAAATTACTCGAAGGAATGGATCATCTTGAATACTTCAAGGAACCAAAGTTTTAAAAGAACTC
131 GGAAAATTACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTC
* **
11904947 GTAAAAATTTGACAAGTTCGG
196 GTAAAAGTTTGACAAGTTCCA
* * * *
11904968 AAGTTCATCCAAGAACTAGGAGAGATTCAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* * * * * * * * *
11905033 AAGTTGTTTATAAAAATGACAAACTATTTGGAACAGAA-GATGCGATTTCCCCAACGTGGAATGC
66 AAGCTGGTTA-CAAAATGACAAACTATTTGGACCA-AATGATGCGATTTCTCGAGCATGGAATGT
* * * * ** ** *
11905097 TC-GAAATATT-CGCCAAAGAATGGATCATCGAGAATACTTTAAGGAACCAAAGTTAT-AAATAA
129 TCGGAAA-ATTACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAA
* *
11905159 CTCGTAAAAGTTTGAGAAGTT-TA
193 CTCGTAAAAGTTTGACAAGTTCCA
* * * *
11905182 AATGTTCATCCAAGAACCAAAAGAGAAACAATTCTTACT-TAAATAAGTTTTTAATTCAAAGACC
1 AA-GTTCGTCCAAGAACCAAGAGAGATACAATTCTCA-TGTAAATAAGTTTTTAATTCAAAGACC
* * *
11905246 AAAAGTTGATTACAAAATGACAAGCTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
64 AAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* ** *
11905311 TCAGAAAA-TAGCTAAAAGGAATGGATCGTCGTGAATACTTTAAGGAACTGAAGTTATATAAAAG
129 TCGGAAAATTA-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAG-T-TATAAAAG
* *
11905375 AAGTTGTAAAAGTTTG---A----C-
191 AACTCGTAAAAGTTTGACAAGTTCCA
*
11905393 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAA-ATAGTTTTTAATTCAAAGACAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATA-AGTTTTTAATTCAAAGACCA
* * *** *
11905457 AAAGCTAGTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTATCGAGCATTCCATGCT
65 AAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * ** *
11905521 C-GATAAA-TAGCTCGAAGGAATGGTTCATCTCAAATACTTTAA-GAACT--CG---TAAAAG--
130 CGGA-AAATTA-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAA
* * *
11905576 -TTGGACAAGTTTGA-AAGTT-C-
193 CTCGTAAAAGTTTGACAAGTTCCA
* * *
11905596 ------GTCCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAATGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* * * *
11905655 AAGCTGTTTACAAAATGACAAACCATTTGGACCAAATGAAGCGATTTC-CTGCGCATGGAATGTT
66 AAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGTT
* * * *
11905719 CGGGAAATGT-CTCGAAGGAAAGGATCGTGTTGAATACTTTGAGGAA-TAGAAGTTATAAAAGAA
130 CGGAAAAT-TACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACT-GAAGTTATAAAAGAA
11905782 CTCGTAAAAGTTTGACAAGTT-C-
193 CTCGTAAAAGTTTGACAAGTTCCA
* * * *
11905804 -----C-TCCAAGAACCATGAGAGATACAATTATCATGTAGATAAGTTTTTAATTCAAAAACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* ** * *
11905863 AAGTTTTTTACAAAATGACAAACTATTTGGACCAAGTGATGCGATTTCTCGAGAATGGAATGTTC
66 AAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
* * *
11905928 -GAAAAATAGCTTGAAGGAATGGATCGCCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACT
131 GGAAAATTA-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACT
11905992 CGTAAAAGTTTGACAAGTTCCA
195 CGTAAAAGTTTGACAAGTTCCA
* * *
11906014 AAATTCATCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAATTTTTAATTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* * * ** *
11906079 AAGCTGGTTAC-AAATAACAACCTATTTGGACCAAATGATGCTATTTCTTAAGCATGGAATGCTC
66 AAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
* * * *
11906143 GAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTT-AGGAACCGAATTTATAAAAGAACTC
131 GGAAAATTACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTC
**
11906207 GTAAAAGTTTGACAAGTTCGG
196 GTAAAAGTTTGACAAGTTCCA
* * * * *
11906228 AAGTTCGTCAAAGAACCAAAAGAGATTA-TATTCTCACGTAAATAAGTTTTTAATTCAATGACCA
1 AAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
* * ** * * * *
11906292 AAA-TTTGTGTACAAAATGACAAAAAATTTGGACCAAATGATGCGACTTC-CTAAGTATGAAATG
65 AAAGCTGGT-TACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATG
* * * * *
11906355 TTTGGGAAATGT-CTCGAAGGAAAGGATCGTCTTGACTACTTTAAGGAACCGAAGTTATAAAAGA
128 TTCGGAAAAT-TACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGA
11906419 ACTCGTAAAAGTTTG---A----C-
192 ACTCGTAAAAGTTTGACAAGTTCCA
* * *
11906436 AAGTTCGTCAAAGAACCAAGAGAGATACAATTCTCATATAAATAAG-TTTTAACTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
*
11906500 AAG-T--TTACAAAATGACAAACTATTTCGG-CCAAATGATGCGATTTCTCGAGGATGGAATGTT
66 AAGCTGGTTACAAAATGACAAACTATTT-GGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * * *
11906561 -TGAAAAATAGCTTGAAGGAATGGATCATCTAGAATACTTTAAGGAACTAAAGTTATAAAAGATC
130 CGGAAAATTA-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAAC
*
11906625 TTGTAAAAGTTTGACAAGTTCCA
194 TCGTAAAAGTTTGACAAGTTCCA
* * * *
11906648 TAGTTCG-ACAAAAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCACAA-ACAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCA-AAGACCA
* * * * * * * *
11906711 AAAGTTGGTTAC-AAATGACAACCTATTCGAACCAAATGATGCTAATTCTCGAGCCTGGAATGCT
65 AAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * *
11906775 CGAAAAATTTCTCGAAAGAATTGATCGTCTTGAATACTTTAAGGAA-TCGAAGTTATAAAAGAAC
130 CGGAAAATTACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACT-GAAGTTATAAAAGAAC
**
11906839 TCGTAAAAGTTTGACAAGTTCGG
194 TCGTAAAAGTTTGACAAGTTCCA
* * * * ** *
11906862 AAGTTCATCAAAGAA-TAAGGAGAGATTA-TATTCTCACATAAATAAGTTTTTAATTCAATGACC
1 AAGTTCGTCCAAGAACCAA-GAGAGA-TACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC
** * *
11906925 AAAAG-TTTTTACAAAATGACAAAC-ATTTGGACCAAATGATGCGACTTCCCGAGCATGGAATGT
64 AAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * *
11906988 TCGGGAAATGT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAT
129 TCGGAAAAT-TACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAA
*
11907052 CTCGTAAAAGTGTG---A----C-
193 CTCGTAAAAGTTTGACAAGTTCCA
* **
11907068 AAGTTCGTCCTAGAACCAAGAGAGATACAATTCTCACATAAAT-AGTTTTTAATTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* ** **
11907132 AAG-TAGTTTACAAAATGAC-AACTATTTGGACCAAAAAATGCGATTTCTCGAGCATGGTCTGTT
66 AAGCT-GGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG-T
* * * **
11907195 TC-GAAAAATATCTTGAAGGAATGGATTG-CTTGAATACTTTAAGGAACCAAAGTTATAAAAGAA
129 TCGGAAAATTA-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAA
11907258 CTCGTAAAAGTTTGACAAGTTCCA
193 CTCGTAAAAGTTTGACAAGTTCCA
* * * *
11907282 ATGTTCATCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAATGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* * * *
11907347 AA-CTGGTTAC-AAATGACAACCTATTTGGACCAAATTGTGTGCGATCTCCCGAGCATGGAATGT
66 AAGCTGGTTACAAAATGACAAACTATTTGGACCAAA-TG-ATGCGATTTCTCGAGCATGGAATGT
* * * * * *
11907410 TTGGGAAATGT-CTCGAAGGAAAGGATCATGTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
129 TCGGAAAAT-TACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAA
* *
11907474 CTCATAACAGTTTGACAAGTT-C-
193 CTCGTAAAAGTTTGACAAGTTCCA
* * * *
11907496 -A-----TCCAAGAA-CAATGAGAGATGCAATTATTACGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
*
11907554 AAAG-TTGTTCACAAAATGACAAACTATTTGGACCAAATGATGC-AGTTTCTCGAGCATGGAATG
65 AAAGCTGGTT-ACAAAATGACAAACTATTTGGACCAAATGATGCGA-TTTCTCGAGCATGGAATG
* * * * * *
11907617 TT-TGAAAAATAGCTTGAATGAATGGATCATCTTGAATACTTTAAGGAACTGAAGTTAAAAAAGA
128 TTCGGAAAATTA-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGA
11907681 ACTCGTAAAAGTTTGACAAGTTCCA
192 ACTCGTAAAAGTTTGACAAGTTCCA
* * * *
11907706 ATGTTCGCCCAAGAACCAAGAGAGAAAAACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACA
1 AAGTTCGTCCAAGAACCAAGAGAG--ATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC
* *
11907771 AAAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTCGATCATGGAATGC
64 AAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG-
* * * *
11907835 TT--AAAAATTACT-TAGAGGAATGAATCGTCTTGAATACTTTAAGGAACCT-AAGTTA-CAAAG
128 TTCGGAAAATTACTCGA-AGGAATGGATCGTCTTGAATACTTTAAGGAA-CTGAAGTTATAAAAG
*
11907895 AACTCATAAAAGTTTGACAAGTT-CA
191 AACTCGTAAAAGTTTGACAAGTTCCA
* * * * *
11907920 GAAGTTCATCAAAGAACCAGGTGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
1 -AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
* ** * * * * *
11907985 AAACCTATTTACAAAATGAC-AA--ATTTGGACCAAATGATTCAACTTCCCGAGCATGGAATGAT
65 AAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * *
11908047 CGGGAAATGT-CTCGAAGGAAAGAATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAATAAC
130 CGGAAAAT-TACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAAC
* * * ***
11908111 TCGTAAAAATTTGGCATGTTTGT
194 TCGTAAAAGTTTGACAAGTTCCA
* * *
11908134 AAGTTTGTCCTAGAACCAAGAGAGATACAATTCTC-TCTTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCAT-GTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11908198 AAAG-TAGTTTAGAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTTGAGCAAGGAATGT
65 AAAGCT-GGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * *
11908262 TC-AAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAACAA
129 TCGGAAAATTA-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAA
*
11908326 CTAC-TAAAAGTCTG---A-----A
193 CT-CGTAAAAGTTTGACAAGTTCCA
* *
11908342 AAGTTCTTCCAAGAACCAAGAGGGATACAATTCTCATGTAAATAAG-TTTTAATTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
* * * *
11908406 AAGCTAGTTAC-AAATGACAACCTATTTTGACCAAATGAAGCGATTTC
66 AAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
11908453 CCGTGTATGG
Statistics
Matches: 3101, Mismatches: 445, Indels: 318
0.80 0.12 0.08
Matches are distributed among these distances:
197 63 0.02
198 84 0.03
199 4 0.00
200 2 0.00
201 7 0.00
202 1 0.00
203 5 0.00
204 109 0.04
205 34 0.01
206 162 0.05
207 88 0.03
208 410 0.13
209 90 0.03
210 86 0.03
211 72 0.02
212 65 0.02
213 161 0.05
214 438 0.14
215 609 0.20
216 437 0.14
217 108 0.03
218 62 0.02
219 4 0.00
ACGTcount: A:0.40, C:0.15, G:0.18, T:0.28
Consensus pattern (216 bp):
AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAA
AAGCTGGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
GGAAAATTACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTC
GTAAAAGTTTGACAAGTTCCA
Found at i:11906263 original size:214 final size:214
Alignment explanation
Indices: 11905561--11908452 Score: 3126
Period size: 208 Copynumber: 13.7 Consensus size: 214
11905551 CAAATACTTT
* * *
11905561 AAGAACTCGTAAAAGTTGGACAAGTTTGAAAGTTCGTCCAAGAACCAGGAGAGATACAATTCTCA
1 AAGAACTCGTAAAAGTTTGACAAG-TT-CAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* * *
11905626 CGTAAATAAGTTTTTAATTCAATGACCAAAAGCTGTTTACAAAATGACAAACCATTTGGACCAAA
64 CGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAA
* * ** * *
11905691 TGAAGCGATTTC-CTGCGCATGGAATGTTCGGGAAA-TGTCTCGAAGGAAAGGATCGTGTTGAAT
129 TGATGCGATTTCTC-GAGCATGGAATGTTCGAAAAATTG-CTCGAAGGAATGGATCGTCTTGAAT
* **
11905754 ACTTTGAGGAATAGAAGTTATAA
192 ACTTTAAGGAACCGAAGTTATAA
* * *
11905777 AAGAACTCGTAAAAGTTTGACAAGTTC-----C-TCCAAGAACCATGAGAGATACAATTATCATG
1 AAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACG
* * * ** *
11905836 TAGATAAGTTTTTAATTCAAAAACCAAAAGTTTTTTACAAAATGACAAACTATTTGGACCAAGTG
66 TAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATG
* * * *
11905901 ATGCGATTTCTCGAGAATGGAATGTTCGAAAAATAGCTTGAAGGAATGGATCGCCTTGAATACTT
131 ATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTT
*
11905966 TAAGGAACTGAAGTTATAA
196 TAAGGAACCGAAGTTATAA
* *
11905985 AAGAACTCGTAAAAGTTTGACAAGTTCCAAAATTCATCCAAGAACCAAGAGAGATACAATTCTCA
1 AAGAACTCGTAAAAGTTTGACAAGTT-C-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* * * *
11906050 TGTAAATAAATTTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATAACAACCTATTTGGACCAAA
64 CGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAA
* ** *
11906114 TGATGCTATTTCTTAAGCATGGAATGCTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATAC
129 TGATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATAC
*
11906179 TTT-AGGAACCGAATTTATAA
194 TTTAAGGAACCGAAGTTATAA
* * *
11906199 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAAAAGAGATTA-TATTCTC
1 AAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTC
* * * **
11906263 ACGTAAATAAGTTTTTAATTCAATGACCAAAA-TTTGTGTACAAAATGACAAAAAATTTGGACCA
63 ACGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGT-TACAAAATGACAAACTATTTGGACCA
* * * * * ** *
11906327 AATGATGCGACTTC-CTAAGTATGAAATGTTTGGGAAA-TGTCTCGAAGGAAAGGATCGTCTTGA
127 AATGATGCGATTTCTC-GAGCATGGAATGTTCGAAAAATTG-CTCGAAGGAATGGATCGTCTTGA
*
11906390 CTACTTTAAGGAACCGAAGTTATAA
190 ATACTTTAAGGAACCGAAGTTATAA
* **
11906415 AAGAACTCGTAAAAGTTTG---A---CAAGTTCGTCAAAGAACCAAGAGAGATACAATTCTCATA
1 AAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACG
*
11906474 TAAATAAG-TTTTAACTCAAAGACCAAAAG-T--TTACAAAATGACAAACTATTTCGG-CCAAAT
66 TAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTT-GGACCAAAT
* * * * * *
11906534 GATGCGATTTCTCGAGGATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCATCTAGAATACT
130 GATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACT
**
11906599 TTAAGGAACTAAAGTTATAA
195 TTAAGGAACCGAAGTTATAA
* * * *
11906619 AAGATCTTGTAAAAGTTTGACAAGTTCCATAGTTCG-ACAAAAACCAAGAGAGATACAATTCTCA
1 AAGAACTCGTAAAAGTTTGACAAGTT-CA-AGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* * * * * *
11906683 TGTAAATAAGTTTTTAATTCACAA-ACAAAAAGTTGGTTAC-AAATGACAACCTATTCGAACCAA
64 CGTAAATAAGTTTTTAATTCA-AAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAA
* * * * * * *
11906746 ATGATGCTAATTCTCGAGCCTGGAATGCTCGAAAAATTTCTCGAAAGAATTGATCGTCTTGAATA
128 ATGATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATA
*
11906811 CTTTAAGGAATCGAAGTTATAA
193 CTTTAAGGAACCGAAGTTATAA
* * * *
11906833 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCATCAAAGAA-TAAGGAGAGATTA-TATTCT
1 AAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAACCAA-GAGAGA-TACAATTCT
* * **
11906896 CACATAAATAAGTTTTTAATTCAATGACCAAAAG-TTTTTACAAAATGACAAAC-ATTTGGACCA
62 CACGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCA
* * ** *
11906959 AATGATGCGACTTCCCGAGCATGGAATGTTCGGGAAA-TGTCTCGAAGGAAAGGATCGTCTTGAA
127 AATGATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTG-CTCGAAGGAATGGATCGTCTTGAA
*
11907023 TACTTTAAGGAACTGAAGTTATAA
191 TACTTTAAGGAACCGAAGTTATAA
* * * *
11907047 AAGATCTCGTAAAAGTGTG---A---CAAGTTCGTCCTAGAACCAAGAGAGATACAATTCTCACA
1 AAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACG
* *
11907106 TAAAT-AGTTTTTAATTCAAAGACCAAAAG-TAGTTTACAAAATGAC-AACTATTTGGACCAAAA
66 TAAATAAGTTTTTAATTCAAAGACCAAAAGCT-GGTTACAAAATGACAAACTATTTGGACCAAAT
* ** * *
11907168 AATGCGATTTCTCGAGCATGGTCTGTTTCGAAAAATAT-CTTGAAGGAATGGATTG-CTTGAATA
130 GATGCGATTTCTCGAGCATGGAATG-TTCGAAAAAT-TGCTCGAAGGAATGGATCGTCTTGAATA
*
11907231 CTTTAAGGAACCAAAGTTATAA
193 CTTTAAGGAACCGAAGTTATAA
*
11907253 AAGAACTCGTAAAAGTTTGACAAGTTCCAATGTTCATCCAAGAACCAAGAGAGATACAATTCTCA
1 AAGAACTCGTAAAAGTTTGACAAGTT-CAA-GTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* *
11907318 CGTAAATAAGTTTTTAATTCAATGACCAAAA-CTGGTTAC-AAATGACAACCTATTTGGACCAAA
64 CGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAA
* * * * ** * * *
11907381 TTGTGTGCGATCTCCCGAGCATGGAATGTTTGGGAAA-TGTCTCGAAGGAAAGGATCATGTTGAA
129 -TG-ATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTG-CTCGAAGGAATGGATCGTCTTGAA
11907445 TACTTTAAGGAACCGAAGTTATAA
191 TACTTTAAGGAACCGAAGTTATAA
* * * * *
11907469 AAGAACTCATAACAGTTTGACAAGTTC-A-----TCCAAGAA-CAATGAGAGATGCAATTATTAC
1 AAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCAC
*
11907527 GTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTCACAAAATGACAAACTATTTGGACCAAA
65 GTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTT-ACAAAATGACAAACTATTTGGACCAAA
* * * * *
11907591 TGATGC-AGTTTCTCGAGCATGGAATGTTTGAAAAATAGCTTGAATGAATGGATCATCTTGAATA
129 TGATGCGA-TTTCTCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATA
* *
11907655 CTTTAAGGAACTGAAGTTAAAA
193 CTTTAAGGAACCGAAGTTATAA
* *
11907677 AAGAACTCGTAAAAGTTTGACAAGTTCCAATGTTCGCCCAAGAACCAAGAGAGAAAAACAATTCT
1 AAGAACTCGTAAAAGTTTGACAAGTT-CAA-GTTCGTCCAAGAACCAAGAGAG--ATACAATTCT
* * *
11907742 CATGTAAATAAGTTTTTAATTCAAAGACAAAAAGCTGGTTAC-AAATGACAACCTATTTGGACCA
62 CACGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCA
* * * *
11907806 AATGATGCGATTTCTCGATCATGGAATGCTT--AAAAATTACT-TAGAGGAATGAATCGTCTTGA
127 AATGATGCGATTTCTCGAGCATGGAATG-TTCGAAAAATTGCTCGA-AGGAATGGATCGTCTTGA
* *
11907868 ATACTTTAAGGAACCTAAGTTA-CA
190 ATACTTTAAGGAACCGAAGTTATAA
* * * * *
11907892 AAGAACTCATAAAAGTTTGACAAGTTCAGAAGTTCATCAAAGAACCAGGTGAGATACAATTCTCA
1 AAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* **
11907957 CGTAAATAAGTTTTTAATTCAAAGACCAAAACCTATTTACAAAATGAC-AA--ATTTGGACCAAA
64 CGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAA
* * * * * ** * *
11908019 TGATTCAACTTCCCGAGCATGGAATGATCGGGAAA-TGTCTCGAAGGAAAGAATCGTCTTGAATA
129 TGATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTG-CTCGAAGGAATGGATCGTCTTGAATA
11908083 CTTTAAGGAACCGAAGTTATAA
193 CTTTAAGGAACCGAAGTTATAA
* * * * * * * *
11908105 AATAACTCGTAAAAATTTGGCATGTTTGTAAGTTTGTCCTAGAACCAAGAGAGATACAATTCTCT
1 AAGAACTCGTAAAAGTTTGACAAG-TT-CAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA
* * *
11908170 CTTAAATAAGTTTTTAATTCAAAGACCAAAAG-TAGTTTAGAAAATGACAAACTATTTGGACCAA
64 CGTAAATAAGTTTTTAATTCAAAGACCAAAAGCT-GGTTACAAAATGACAAACTATTTGGACCAA
* * * * *
11908234 ATGATGCGATTTCTTGAGCAAGGAATGTTCAAAAAATAGCTTGAAGGAATGGATCGTCTTGAATA
128 ATGATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATA
*
11908299 CTTTAAGGAACTGAAGTTATAA
193 CTTTAAGGAACCGAAGTTATAA
* * * * *
11908321 AACAACTAC-TAAAAGTCTG--AA----AAGTTCTTCCAAGAACCAAGAGGGATACAATTCTCAT
1 AAGAACT-CGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCAC
* * *
11908379 GTAAATAAG-TTTTAATTCAAAGACCAAAAGCTAGTTAC-AAATGACAACCTATTTTGACCAAAT
65 GTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAAT
*
11908442 GAAGCGATTTC
130 GATGCGATTTC
11908453 CCGTGTATGG
Statistics
Matches: 2257, Mismatches: 314, Indels: 220
0.81 0.11 0.08
Matches are distributed among these distances:
204 108 0.05
205 34 0.02
206 155 0.07
207 73 0.03
208 407 0.18
209 12 0.01
210 26 0.01
211 71 0.03
212 66 0.03
213 161 0.07
214 398 0.18
215 304 0.13
216 344 0.15
217 51 0.02
218 43 0.02
219 4 0.00
ACGTcount: A:0.40, C:0.15, G:0.18, T:0.27
Consensus pattern (214 bp):
AAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACG
TAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTACAAAATGACAAACTATTTGGACCAAATG
ATGCGATTTCTCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTT
TAAGGAACCGAAGTTATAA
Found at i:11906875 original size:634 final size:634
Alignment explanation
Indices: 11905561--11908452 Score: 3589
Period size: 634 Copynumber: 4.5 Consensus size: 634
11905551 CAAATACTTT
* * * * *
11905561 AAGAACTCGTAAAAGTTGGACAAGTTTGAAAGTTCGTCCAAGAACCAGGAGAGA-TACAATTCTC
1 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAAGAGAGATTA-AATTCTC
*
11905625 ACGTAAATAAGTTTTTAATTCAATGACCAAAAGCTGTTTACAAAATGACAAACCATTTGGACCAA
65 ACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTG-TTACAAAATGACAAACCATTTGGACCAA
* * * *
11905690 ATGAAGCGATTTCCTGCGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTGTTGAATA
129 ATGATGCGACTTCCTGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCTTGAATA
* * *
11905755 CTTTGAGGAA-TAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCTCCAAGAACCATGA
194 CTTTAAGGAACT-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGA
* * *
11905819 GAGATACAATTATCATGTAGATAAGTTTTTAATTCAAAAACCAAAAGTTTTTTACAAAATGACAA
258 GAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAG--TTTTACAAAATGACAA
* * *
11905884 ACTATTTGGACCAAGTGATGCGATTTCTCGAGAATGGAATGTTCGAAAAATAGCTTGAAGGAATG
321 ACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATG
* *
11905949 GATCGCCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCA
386 GATCGTCTTGAATACTTTAAGGAACTAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCA
* * * *
11906014 AAATTCATCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAATTTTTAATTCAAAGACCAA
451 AAGTTCAT-CAAAAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
* * ***
11906079 AAGCTGGTTACAAATAACAACCTATTTGGACCAAATGATGCTATTTCTTAAGCATGGAATGCTCG
515 AAGCTGGTTACAAATGACAACCTATTTGGACCAAATGATGC-AATTCCCGAGCATGGAATGCTCG
*
11906144 AAAAAT-TGCTCGAAGGAATGGATCGTCTTGAATACTTT-AGGAACCGAATTTATAA
579 AAAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* *
11906199 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAAAAGAGATTATATTCTCA
1 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAAGAGAGATTAAATTCTCA
* **
11906264 CGTAAATAAGTTTTTAATTCAATGACCAAAATTTGTGTACAAAATGACAAAAAATTTGGACCAAA
66 CGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGT-TACAAAATGACAAACCATTTGGACCAAA
* * * * *
11906329 TGATGCGACTTCCTAAGTATGAAATGTTTGGGAAATGTCTCGAAGGAAAGGATCGTCTTGACTAC
130 TGATGCGACTTCCTGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCTTGAATAC
* *
11906394 TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCAAAGAACCAAGAGA
195 TTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGA
* *
11906459 GATACAATTCTCATATAAATAAG-TTTTAACTCAAAGACCAAAAG-TTTACAAAATGACAAACTA
260 GATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTTTACAAAATGACAAACTA
*
11906522 TTTCGG-CCAAATGATGCGATTTCTCGAGGATGGAATGTTTGAAAAATAGCTTGAAGGAATGGAT
325 TTT-GGACCAAATGATGCGATTTCTCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGAT
* * * * *
11906586 CATCTAGAATACTTTAAGGAACTAAAGTTATAAAAGATCTTGTAAAAGTTTGACAAGTTCCATAG
389 CGTCTTGAATACTTTAAGGAACTAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAG
* *
11906651 TTCGA-CAAAAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCACAA-ACAAAAA
454 TTC-ATCAAAAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCA-AAGACCAAAA
* * * * *
11906714 GTTGGTTACAAATGACAACCTATTCGAACCAAATGATGCTAATTCTCGAGCCTGGAATGCTCGAA
517 GCTGGTTACAAATGACAACCTATTTGGACCAAATGATGC-AATTCCCGAGCATGGAATGCTCGAA
* * * *
11906779 AAATTTCTCGAAAGAATTGATCGTCTTGAATACTTTAAGGAATCGAAGTTATAA
581 AAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* * *
11906833 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCATCAAAGAA-TAAGGAGAGATTATATTCTC
1 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAA-GAGAGATTAAATTCTC
* *
11906897 ACATAAATAAGTTTTTAATTCAATGACCAAAAGTTTTTACAAAATGACAAA-CATTTGGACCAAA
65 ACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTACAAAATGACAAACCATTTGGACCAAA
*
11906961 TGATGCGACTTCCCGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCTTGAATAC
130 TGATGCGACTTCCTGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCTTGAATAC
* * *
11907026 TTTAAGGAACTGAAGTTATAAAAGATCTCGTAAAAGTGTGACAAGTTCGTCCTAGAACCAAGAGA
195 TTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGA
**
11907091 GATACAATTCTCACATAAAT-AGTTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGAC-AAC
260 GATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGT--TTTACAAAATGACAAAC
** ** *
11907154 TATTTGGACCAAAAAATGCGATTTCTCGAGCATGGTCTGTTTCGAAAAATATCTTGAAGGAATGG
323 TATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTT-GAAAAATAGCTTGAAGGAATGG
* *
11907219 ATTG-CTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAA
387 ATCGTCTTGAATACTTTAAGGAACTAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAA
* * *
11907283 TGTTCATCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAATGACCAAA
452 AGTTCAT-CAAAAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAA
* * * *
11907348 A-CTGGTTACAAATGACAACCTATTTGGACCAAATTGTGTGCGATCTCCCGAGCATGGAATGTTT
516 AGCTGGTTACAAATGACAACCTATTTGGACCAAA-TG-ATGCAAT-TCCCGAGCATGGAATGCTC
** * * *
11907412 GGGAAATGTCTCGAAGGAAAGGATCATGTTGAATACTTTAAGGAACCGAAGTTATAA
578 GAAAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* * ** * *
11907469 AAGAACTCATAACAGTTTGACAAGTTC---A--TC--C-AAGAA-CAATGAGAGATGCAATTATT
1 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAA-GAGAGATTAAATTCTC
* *
11907525 ACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTCACAAAATGACAAACTATTTGGACCAA
65 ACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTT-ACAAAATGACAAACCATTTGGACCAA
* * * ** * * * *
11907590 ATGATGC-AGTTTCTCGAGCATGGAATGTTTGAAAAATAG-CTTGAATGAATGGATCATCTTGAA
129 ATGATGCGACTTCCT-GAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTCTTGAA
*
11907653 TACTTTAAGGAACTGAAGTTAAAAAAGAACTCGTAAAAGTTTGACAAGTTCCAATGTTCGCCCAA
192 TACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C---G-T---CCAA
* * *
11907718 GAACCAAGAGAGAAAAACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACAAAAAGCTGGTTA
249 GAACCAAGAGAG--ATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAG-T-TTTA
* * *
11907783 C-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTCGATCATGGAATGCTT-AAAAATTA-
310 CAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTTGAAAAA-TAG
* * *
11907845 CTT-AGAGGAATGAATCGTCTTGAATACTTTAAGGAACCT-AAGTTA-CAAAGAACTCATAAAAG
374 CTTGA-AGGAATGGATCGTCTTGAATACTTTAAGGAA-CTAAAGTTATAAAAGAACTCGTAAAAG
* *
11907907 TTTGACAAGTT-CAGAAGTTCATCAAAGAACCAGGTGAGATACAATTCTCACGTAAATAAGTTTT
437 TTTGACAAGTTCCA-AAGTTCATCAAA-AACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* ** *
11907971 TAATTCAAAGACCAAAACCTATTTACAAAATGACAA---ATTTGGACCAAATGATTCAACTTCCC
500 TAATTCAAAGACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAATGATGCAA-TTCCC
* ** * *
11908033 GAGCATGGAATGATCGGGAAATGTCTCGAAGGAAAGAATCGTCTTGAATACTTTAAGGAACCGAA
563 GAGCATGGAATGCTCGAAAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
11908098 GTTATAA
628 GTTATAA
* * * * * * * **
11908105 AATAACTCGTAAAAATTTGGCATGTTTGTAAGTTTGTCCTAGAACCAAGAGAGA-TACAATTCTC
1 AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAAGAGAGATTA-AATTCTC
* * * * * *
11908169 TCTTAAATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTAGAAAATGACAAACTATTTGGACCAA
65 ACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTG-TTACAAAATGACAAACCATTTGGACCAA
* * * *** * *
11908234 ATGATGCGATTTCTTGAGCAAGGAATGTTCAAAAAATAG-CTTGAAGGAATGGATCGTCTTGAAT
129 ATGATGCGACTTCCTGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCGTCTTGAAT
* * * *
11908298 ACTTTAAGGAACTGAAGTTATAAAACAACTAC-TAAAAGTCTGAAAAGTTCTTCCAAGAACCAAG
193 ACTTTAAGGAACTGAAGTTATAAAAGAACT-CGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAG
* *
11908362 AGGGATACAATTCTCATGTAAATAAG-TTTTAATTCAAAGACCAAAAGCTAGTTAC-AAATGACA
257 AGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAG-T-TTTACAAAATGACA
* * *
11908425 ACCTATTTTGACCAAATGAAGCGATTTC
320 AACTATTTGGACCAAATGATGCGATTTC
11908453 CCGTGTATGG
Statistics
Matches: 1987, Mismatches: 207, Indels: 125
0.86 0.09 0.05
Matches are distributed among these distances:
628 53 0.03
629 18 0.01
630 104 0.05
631 6 0.00
632 170 0.09
633 222 0.11
634 395 0.20
635 96 0.05
636 200 0.10
637 23 0.01
638 282 0.14
639 106 0.05
640 55 0.03
641 77 0.04
642 1 0.00
643 2 0.00
644 167 0.08
645 10 0.01
ACGTcount: A:0.40, C:0.15, G:0.18, T:0.27
Consensus pattern (634 bp):
AAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAAGAGAGATTAAATTCTCA
CGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTACAAAATGACAAACCATTTGGACCAAAT
GATGCGACTTCCTGAGCATGGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCTTGAATACT
TTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAG
ATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTTTACAAAATGACAAACTAT
TTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCG
TCTTGAATACTTTAAGGAACTAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTT
CATCAAAAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTG
GTTACAAATGACAACCTATTTGGACCAAATGATGCAATTCCCGAGCATGGAATGCTCGAAAAATG
TCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
Found at i:11911161 original size:21 final size:22
Alignment explanation
Indices: 11911126--11911169 Score: 56
Period size: 22 Copynumber: 2.0 Consensus size: 22
11911116 ACACATTTAA
*
11911126 TAACTTAAACTAAA-TAACAAAT
1 TAACTAAAACTAAATTAA-AAAT
11911148 TAACTAAAAC-AAATTAAAAAT
1 TAACTAAAACTAAATTAAAAAT
11911169 T
1 T
11911170 TATTCCAGTA
Statistics
Matches: 20, Mismatches: 1, Indels: 3
0.83 0.04 0.12
Matches are distributed among these distances:
21 8 0.40
22 12 0.60
ACGTcount: A:0.61, C:0.11, G:0.00, T:0.27
Consensus pattern (22 bp):
TAACTAAAACTAAATTAAAAAT
Found at i:11914594 original size:216 final size:214
Alignment explanation
Indices: 11911474--11944983 Score: 12524
Period size: 215 Copynumber: 156.5 Consensus size: 214
11911464 CTCATAAAAA
* * **
11911474 TTTGACAAGTTTGTCCAAGAATCGTGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAA
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * **
11911539 GACCAAAAGTTGTTTAC-AAATGACAAACTATTTGGACCAAATAATGTGATTTCTATAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * *
11911603 ATGATCGGGAAAT-TGCTTGAAGGAAAGGATCGTCTTGAATGCTTTAAGGAACCGAAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11911667 AGAACTCGTAAAA-TTTAACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11911689 TTTGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTCGAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA-GTTTTAATTCAAAG
* * *
11911754 ACCAACAGTTGTTTAC-AAATGACAAACTATTTGGACCAAATGATGCAATTTC-CGAGGATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * *
11911817 CGTTCGGTAAATGTCTCGAAGGAAAGGATCGTCTTGAATACTTTTCA-GAACCGAAGTCATAAAA
129 TGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATAC-TTTAAGGAACCGAAGTTATAAAA
11911881 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * *
11911903 -TTG---G-TC-T--TAGAACCAAGAGAGATACAATGCTCACATAAATAAGTTTTAAATCAAAGA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAGA
* * * *
11911960 CCAAAAGTACT-TTACAAAATGACAGACTATTTGGACCAAATGATGCGATTTCTCAAGCACGGAG
66 CCAAAAGT--TGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * * * * * ** *
11912024 TGCTCGAAAAATAG-CTTGAAGGAATAGATCATCTTGAATACTTTATGGTATTGAAGTTAAAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11912088 GAAATCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * * * *
11912110 -TCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATACGTTTTAATCCAAACA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAGA
* * * ** *
11912174 CCAAAAGCTGGTT-TAAAATGATAGCCTATTTGGA-CAAATGATGCGATTTCTCGAGTATGGAAT
66 CCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAAT
* *** * *
11912237 GCTCAAAAAAT-TGCTCGAAGGAATGGATAGTCTTGAATAATTTAAGGAACCGAAGTTATAAAAG
130 GTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11912301 AACTCGTAAAAGTTTGAGAAG
194 AACTCGTAAAAGTTTGACAAG
* * * * *
11912322 TTCGGAATTTCGTCAAAGAACC-AG-GAG--A-GA---T---GTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
*** * * * *
11912376 ACCAAAAGTTGTTTAGGGAATGACAAACAATTTGGACCAAATGATGCAAATTCTCGAGCATGGAT
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * * *
11912441 TATTC-AGAAATGTCTCAAAGGAAAGGATCATCTTGAATACTTTAAGGAACTGAAGTTAAAAAAG
129 TGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11912505 AACTCGTAAAAATTTGAC---
194 AACTCGTAAAAGTTTGACAAG
* * * * *
11912523 -----AAGTTCGTCCTAGAACCATGAGAGATACAATTATCACATAAATAAGTTTTTAATTGAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11912583 ACCAAAAGTAGTTTACAAAATGACAAATTATTTGGACC-AATGATGCGATTTCTAGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** ** * * *
11912647 TGTTCGAAAAATAG-CTTAAAGGAATGGATCGTTTTGAATATTTTAAGGAA-CTACAGTTATAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGA-AGTTATAAA
* *
11912710 AGAACTCGTAAAAGTCTAACAAAG
192 AGAACTCGTAAAAGTTTGAC-AAG
** * *
11912734 TTCCAAAGTTCGTCGAAGAACC-A-AGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11912797 ACCAAAAGCTTGTTAC-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTTGAGCCTGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * * * * *
11912861 TCCTCTGAAAAT-TGGTAGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11912925 GAACTCGTAAAAGTTTGATAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * *
11912947 TTCG-AAGTTCATCCAAG-ACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAATG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * *
11913010 ACCAAAAGTTGTTTACAAAATGAC-AACTATTTGGACCAAATAATGTGA-TTCCCAGAGAATGGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGA
* * * *
11913073 ATGTTCGGGAAAT-TGCTCAAAGGAAAGGATCGTCTTGAACACTTTAAGG-ATCGAAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11913136 AGAACTTGTAAAA-ATTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11913158 TTTGGAAGTTCGTCCAAGAACCAAGAGAGATAC-ATTCTCACGTAAATAAGGATTCAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA-GTTTTAATTCAAAG
* * *
11913222 ACCAAAAGTTGTTTACAAAATGACAAGCTA-TT-GACCAATTGATGCGATTTCCCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * *
11913285 TGTTCGGGAAATGT-TCAAAGGAAAGGATCGTCGTGAACACTTTAAGGAACCGAAGGTAAAAAAG
129 TGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
11913349 AACTCGTAAAAGTTTGAC---
194 AACTCGTAAAAGTTTGACAAG
* * **
11913367 -----AAGTTCGTCCTAGAACCAAAAGAGATACAATTCTCACAAAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11913427 ACC-AAAGTAGTTACAAAATGACAAACT-TTTAGACCAAATGATGCGATTTCTCGAGCATGGAAT
65 ACCAAAAGTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAAT
* ** * * * * *
11913490 GTTTGAAAAATAG-CTTGAAGG-ATCGATCGTCTTGAATGCTTTAAGAAACTGAAGTTA-AAAAG
130 GTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
* *
11913552 AACTCTTAAAAGTCTGACAAG
194 AACTCGTAAAAGTTTGACAAG
** *
11913573 TTCAAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * *
11913638 ACTAAAAAGTAGTTTGCAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTCTAGCATGGA
65 AC-CAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
** * * * *
11913703 ATGTTCGAAAAATAG-CTTGAAGGAACGGATCATCTTGAATACTTTAAGGAACTGAAGTTATAAA
128 ATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11913767 AGAACTTGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * *** * **
11913790 TTCGAAA--AC-ACCATCCACCAAGAGAGATACAATT-TCATGTAAATAAGTTTTTAATTCAGTG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * * *
11913851 ACCAAAAGCTGGTTAC-AAGTGACAACCTATTTGAACCAAATGATGCGATTTCTTGAGCCTGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * * * *
11913915 TGCTCTGAAAAT-TGCTCTAATGAAT--AGCGTCTTGAATACTTTAAGGAATCGAAGTTATAATA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11913977 GAACTCATAAAAGTTTAACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * * * *
11913999 TTCAAAAGTTCGTCCGAGAACCAGGAGAGATGCAATTCTCACGTAAATATGTTTTAATTCAAAGA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAGA
** *
11914064 CCAAAAGTTGTTTACAAAATGACAAACTA-TTGGACCAAAT-ATTGTAATTTC-CAGAGAATGGA
66 CCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGA-TGCGATTTCTC-GAGCATGGA
* **
11914126 ATGTTAGGGAAAT-TGCTCG-AGGAA-GGATCGTCTTGAATACTTTAAGGAATTGAAGTTA-AAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11914187 AGGAACTCGTAAAA-ATTGAC---
192 A-GAACTCGTAAAAGTTTGACAAG
* * * *
11914207 -----AAGTTCATCCTAGAACCAAGAGAGATACAATTTTCACATAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * *
11914267 GCCAAAAGGTT-TTACAAAATGACAAACTATTTGGACCAAATAATGTGATTTC-CAGAGAATGGA
65 ACCAAAA-GTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGA
* * * *
11914330 ATGTTCAGGAAAT-TGCTCAAAGGAAAGGATCGTCTTGAATACTTTAAGGAATCG-AGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11914393 AGAGCTCG-AAAA-TTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* ** * * *
11914414 TTTGGAAGTTCGTTGTTGTGTAAGAACCAAAAGAGGTACAATTCTAACGTAAATAAG-TTTAATT
1 TTTGAAAGTTC------GTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATT
* * *
11914478 CAAAGACCAAAATTTGTTATAAAATGACAAACTATTTGGACCAAATGATGCGACTTCTCGAGCAT
60 CAAAGACCAAAAGTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCAT
* *
11914543 GGAATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCTTCAATACTTTAAGGAACCGAAGTTATA
125 GGAATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATA
* *
11914608 AAATAACTCGTAAAAGTTTGAGAAG
190 AAAGAACTCGTAAAAGTTTGACAAG
* * * * * * *
11914633 -TTCAGATGTTCGTCCAAGAACCAAAAGAGAAACAATTCTTACTTAAATAAGTTTTTATTCAAAG
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAG
* * * *
11914697 GCCAAAAGTTGGTTAC-AAATGACAAGCTATTTTGACCAAATGATGCGATTTCTCAAGCATGGAA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * *
11914761 TGTTCGAAAAATAG-CTCGAAAGAATGGATCGTCGTGAATAC-TT--GG---C--------AAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
**
11914811 GAAC-CAAAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** ** * ** *** * ***
11914832 TTGTCCAAGAACCATGAGAAGATA-CAATTCTCATG-TA-AAAT-T-A-GTTTTTAA-TTTTAA-
1 TT-TGAAAG-TTCGT-CCAAGA-ACCAA--GAGA-GATACAATTCTCACGTAAATAAGTTTTAAT
** ** * ** * * * * *
11914889 -AGACCACAAAAGTTGT-TTACAAAATGACAAACCATTGGGACGAAA-GATGTGATTTC-CCATG
59 TCAAAGACCAAAAGT-TGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-G
* * * * * *
11914950 CAT-GAATGTTCGAGAAATGACTGGAAGGAATGGATCGTCTTGAACACTATAAGGAACAGAAGTT
122 CATGGAATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTT
*
11915014 ATAAAAGAACTTGTAAAA-TTTGACAAG
187 ATAAAAGAACTCGTAAAAGTTTGACAAG
* * * * **
11915041 TTTGGAAGTTCGTCTAAGAACCAAGAAAGATACAATTTCTCACGTAAATAAGGATTTAATTTGAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAA-TTCTCACGTAAATAA-GTTTTAATTCAAA
* *
11915106 GACCAAAAGAGTTGTTTAC-AAATGACAAAACTATTTGGACCTAATAATGCGATTTCTCGAGCAT
64 GACC-AAA-AGTTG-TTACAAAATGAC-AAACTATTTGGACCAAATGATGCGATTTCTCGAGCAT
*** * * **
11915170 GGAATGTTCAAAAAATAG-CTTGAAGGAATGAATCGTCTTGAATACTTTAAGGAATTGAAGTTAT
125 GGAATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT
11915234 AAAAGAACTCGTAAAAGTTTGACAAG
189 AAAAGAACTCGTAAAAGTTTGACAAG
* ** * *
11915260 TTCT-AAAGTTCCTTAAACAACCAGGAGAGAGATA-TA-TCTCACGTAAATAAGTTTTTAATTCA
1 TT-TGAAAGTTCGTCCAAGAACCA--AGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCA
** * * * * * *
11915322 AAGATTAAAAGCTGTTTACAAAATGACAAACAATTTAGACCAAATGATGCAACTTCCCGAGCATG
62 AAGACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATG
* * * * * *
11915387 GAATGTTTGGGAAATATCTCGAAGGAAAGGATCGACTTGAATAATTTTAGGAACCGAAGTTATAA
126 GAATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
11915452 AAGAACTCGTATAAAGTTTGACAAG
191 AAGAACTCGTA-AAAGTTTGACAAG
* * * *
11915477 --T-----TT-GTCCTAGAACCTAGAGAGATACAATTCTCACATAAATAAGTTTTAAATTCAATG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT-AATTCAAAG
* *
11915534 ACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACC-AATGATGCGATTTCTCGTGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * **
11915598 TGTTC--GAAAAGTAGCTTGAAGGAATGGATCATCTT-AATACTTTAAGGAACTGTTGTTATAAA
129 TGTTCGGGAAATGT--CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11915660 AGAACTCGTAAAAGTTTTACAAG
192 AGAACTCGTAAAAGTTTGACAAG
** *
11915683 TTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11915748 ACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGGACCAAATGATGTGATTTCTCGAGCATGGA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTT-GGACCAAATGATGCGATTTCTCGAGCATGGA
* * *
11915812 ATGCTT-GGAAAAT-TACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAAGTTTTAA
128 ATG-TTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
*
11915875 AAGACCTCGTAAAAGTTTGACAAG
191 AAGAACTCGTAAAAGTTTGACAAG
* * * * * * *
11915899 TTCGAAAGTTCGTCAAAGAACCAGGTGAGATTCAATTCTTACATAAATAAG-TTTAATTCAAAGA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAGA
* * *
11915963 CCAAAAGTTGTTTAC-AAATGACAAACAATTTGGACCAAATGATGCGACTTC-CGCGCATGGAAT
66 CCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAAT
* * * * * *
11916026 GTTCGGGAAATATCTCGAAGGAAAAGGATCATCTTGAATAC-TTAAGGAGCCAAAGTTAGAAAAG
130 GTTCGGGAAATGTCTCGAAGG-AATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
11916090 AACTCGTAAAAGTTTGACAAG
194 AACTCGTAAAAGTTTGACAAG
* * * * * *
11916111 TTCGAAAGTTCATCCAAGAACTAGGAGAAATTCAATTCTCACGTAAATAAGTTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG--TTTTAATTCAAA
* * * * * *
11916176 GAACAAAAGTTGTTTATAAAATGACAAACTATTTGGAACAGAA-GATGCAATTTCCCCAGCATGG
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCA-AATGATGCGATTTCTCGAGCATGG
* ** * * * ** *
11916240 AATGCTCGAAAAAT-TCGCCAAAGGAATGGATCATCGAGAATACTTTAAGGAACCAAAGTTATAA
127 AATGTTCGGGAAATGTC-TCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* **
11916304 AATAACTCGTAAAAGTTTGAGTAG
191 AAGAACTCGTAAAAGTTTGACAAG
* * * * * *
11916328 -TTGGATGTTCGTCCAAGAACCAAAAAGAGAAACAATTCTTACTTAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACC-AAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
*
11916392 GACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT-ATGCGATTTCTCGAGCATGAA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
** * * * *
11916456 ATGTTCGAAAAATAG-CTCAAAGGAATGGATCATCGTGAATACTTTAAGGAACTGAAGTTATATA
128 ATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAG-T-TATA
* * *
11916520 AAAGAAGTCATAAAGGTTTGAC---
190 AAAGAACTCGTAAAAGTTTGACAAG
* *
11916542 -----AAGTTCGTCCAAGAACCAAGCGAGATACAATTCTCATGTAAA-ATAGTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATA-AGTTTTAATTCAAAG
* * *
11916601 ACCAAAAGTTAGTTAC-AAATGACAAATTATTTGGACCAAATGATGTGATTTATCGAGCATGGAA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * *
11916665 TGCTCGGTAAATAG-CTCGAAAGAATGGATCATCTCGAATACTTTAA-GAA-C-------T----
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11916716 ----T-GTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * *
11916733 TTTGGAAGTTTGTCCAAGAACC-AG-GAG--A-GA---T---GTAAATAAGTTTTTAACTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
*** * * *
11916787 ACCAAAAGTTGTTTAGGGAATGACAAACAATTTGGACCAAATGATGTGAATTC-CTGAGCATGGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGA
* * * * *
11916851 TTGTTCGAGAAATGTCTCGAAGGAAAGGATCATCTTGAATACTTTAAGGAACCGAAGTTAAAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11916916 GAACTCGT--AA-----A-AA-
193 GAACTCGTAAAAGTTTGACAAG
* * * * * *
11916929 TTTGACAGTTCGTCCTAGAACCATGAGAGATACAATTATCACATAAATAAGTTTTTAATTGAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11916994 ACCAAAAGTAGTTTACAAAATGACAAATTATTTGGACCAAATGATGCGATTTCT----C----AA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * * **
11917051 TGTTCGAAAAATAG-CTTGAAGGAATGGATCGTCTTGAATATTTTAAGGAACTAAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
**
11917115 GAACTCGTAAAAGACTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * *
11917137 TTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAGAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * * *
11917202 ACCAAAAGCTTGTTAC-AAATGACAACCTATTTGGACTAAATGATGCGAATTCTTGATCCTGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * * * * *
11917266 TCCTCTGAAAAT-TGCTCGAAGGAATGGATCATCTTGATTACTTTAAGGAACCAAAGTTATAAAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11917330 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * *
11917352 TTCGAAAGTTCATCCAAGAACCAGGAGAGATGCAATTCTCACGTAAATAAGTTTTTAATTCAATG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * *
11917417 ACCAAAAGTTATTTACAAAATGACAAACTATTTGGACAAAATAATGTGATTTC-CAGAGAATGG-
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGA
* ** * * * ** *
11917480 ATGTTCGGTAAAT-TGCTTAAAGTAAAGAATTATCTTGAATACTTTAAGGAATCGAAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11917544 AGAACTCGTAAAAATTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * ** * *
11917567 TTTGGAAGTTCGTCC-A-AACCAAGAGTGATACAATTCTCATATAAATAAGGATTCAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA-GTTTTAATTCAAAG
*
11917630 ACC-AAAGTTGTTTACAAAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTCGAGCATGG
65 ACCAAAAGTTG-TTAC--AAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* * * * * *
11917694 AATGTTCGAGAAATGTCTCGAAGGAAAGAATCGTCGTGAATACTTTAAGGAACCG-ATTTAAAAA
127 AATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
11917758 AGAACTCGTAAAAGTTTGAC---
192 AGAACTCGTAAAAGTTTGACAAG
* * * *
11917778 -----AAGTTCGTCCTAGTACCAAGAGAGATACAATTCTAACATAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * *
11917838 ACTAAAAGTAGTTTGCAAAATGACAAACTATTTAGACCAAATGATGCGA-TTCTCGAGCGTGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * * *
11917902 TGTTTGAAAAATAG-CTTGAAGGAATCGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11917966 GAACTCGTAAAAGTCTGATAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * *
11917988 CTCGAAAGTTCATCCAAGAACCAAGAGAGATATAATTCTCACATAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11918053 ACCAAAAGTAAT-TTACAAAACGACAAACTATTTGGACCAAATGATGCAATTTCTCGAGCATGGA
65 ACCAAAAGT--TGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
*** * * *
11918117 ATGTTCAAAAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTAGAAA
128 ATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11918181 AGAACTCGTAAAAGTCTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * **
11918204 TTCGAAACTTCATCCAAGAACTAAGAGAGATACAATTCTCTTGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * * * * *
11918269 ACCAAAAGCTGGTTA-GAAGTGACAACCTATTTGAACCAAATGATACGATTTCTTGAGCTTGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * * *
11918333 TGTGCTGAAAAT-TGCTCTAAGGAATAGATAGTCTTGAATAATTT-AGGAACCGAAGTTATAAAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11918396 GAAGTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * * * *
11918418 TTCAAAAGTTCATCCAAGAACCAGGAGAGATACTATTCTGACGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * *
11918483 ACC-AAACTGGTTTACAAAATGACAAACTATTTGGACCAAAT-ATTGTGATTTC-CAGAGAATGG
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGA-TGCGATTTCTC-GAGCATGG
* * * *
11918545 AATGTTAGGGAAAT-TGCT-AAAGGAAAGGATCATCTTGAATACTTTAAGGAACCGAAGTTATAA
127 AATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* *
11918608 AACAACTCGTAAAAATTTGACAAG
191 AAGAACTCGTAAAAGTTTGACAAG
*
11918632 TTTGAAAGTTCGTCCAAGAACCAGGAGAGATACAATTCTCACGTAAA-AAGATTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11918696 ACCAAAACTTGTTTACAAAATGACAAACTATTTGGACCAAAT-ATTGTGATTTC-CAGAGAATGG
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGA-TGCGATTTCTC-GAGCATGG
* * * * *
11918759 AATGTTAGGG-AATTTGCTCAAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGGAGTTATAA
127 AATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* *
11918823 ATGAACTCGTAAAAATTTGACAAG
191 AAGAACTCGTAAAAGTTTGACAAG
*
11918847 TTTGAAAGTTCGTCCAAGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11918912 ACCAAAATTTGTTTACAAAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGA
65 ACCAAAAGTTG-TTAC-AAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * *
11918977 ATGTTCGGGAAAT-TGCTCGAAGGAAAGGATCATCTTGAATACTTTAAGGAACCAAAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
11919041 AGAACTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11919064 -TTG---G-TC-T--TAGAACCAAGAGAGATACAATGCTCACATAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * *
11919121 ACCAAAAGTAGTTTACAAGATGACACACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
*** * * * *
11919186 TGTTCTAAAAATAG-CTTGAAGGAATGGATCGTCGTAAATACTTTAAGGAACCGAAATTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11919250 GAAGTTGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * *
11919272 --T-----TT-GTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATTAATTTTTAATTCAAAT
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA-TAAGTTTTAATTCAAAG
* *
11919329 ACCAAAAGCTGGTTA-AAAATGACAAACTATTTGGTCCAAATGATGCGATTTCTCGAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** *
11919393 TGCTCGATAAATAG-CTCGATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11919457 GGACTCGTAAGAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * *
11919479 TTTGAAAGTTCGTCCAAGAACTAGGAGAGATACAATTTTCACG-AAATTAAATTTTTAATTCAAT
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA-T-AAGTTTTAATTCAAA
* * * * *
11919543 GACCAATAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCGATTTCTCGTGTATTGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * * * * * * *
11919608 ATGTTCGGGAAATGTCTCGAAAGAAAGGATTGTGTTGAATACTTGACGGAATCGAAGTTGTAAAT
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11919673 GAAGTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
***
11919695 --T-----TT-GTCCAAGAACTGTGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * **
11919752 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGAACCAAATAATATGATTTC-CAGAGCATGGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGA
* * * *
11919816 ATGATCGGGAAAT-TGCTCGAAGGAAAGGGTCGTCTTGAATACTTTAAGGAACCGACGTTAT-AA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11919879 ATAACTCGTAAAAGTTTGAGAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * * * * *
11919902 TTCGGATGTTCATCCAAGAACCAAAAGGGAAACAATTCTTACTTAAATAAGTTCTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTT-TTAATTCAAAG
* * * * * *
11919967 AACAAAAGTTGGTTACAAAATAACAAGCAATTTAGACCAAATGATGCTATTTCTCGAGCATGGAA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * * *
11920032 TGTTCAGAAAATAG-GTCGAAGGCATGGATCAT-TGTGAATAGTTTAAGGAACCAAAGTTATAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCT-TGAATACTTTAAGGAACCGAAGTTATAAA
* *
11920095 AGAAGTCGTAAAGGTTTGAC---
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11920115 -----AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA--T--GTAA---CTAATTGAAAGA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAGA
* * * * *
11920168 CCAAATGCTGGTTAC-AAATGACAAACAATTTGGACCAAATGATACGAATTCTC--G-A-GGAAT
66 CCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAAT
* **
11920228 GCTT-GGTAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAATTGAAGTTATAAAA
130 G-TTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11920291 GAACTCGTATAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * * *** * ** * * *
11920313 TTCGGAAGTTCATCAAAGAACC-AG-GTGATGTGA-GCTTTCG-----AACTTTGAGGGTTC--A
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTA--ATTCAAA
** * ** * * ** *
11920368 GA--AAATAGCTTGTTGGAAGAATCGTCTTGAAA-TGCTT-CA-CAAGGTAGAAAC-CTTAAT-T
64 GACCAAA-AG-TTGTTACAA-AAT-GAC---AAACTATTTGGACCAA-AT-GATGCGATT--TCT
* * ** * * * *
11920426 CGAAGCACTTGAAT-TCTCTAAGGAACCATAG-CTATATTA-AAACTACGACCGGCTT-AA-ACT
118 CG-AGCA-TGGAATGT-TC--GGGAA--AT-GTCTCGA--AGGAA-T-GGATCGTCTTGAATACT
* * * * * * ** * ** * **** ** *
11920486 TGACTA-TATACTTGAATCTTGGTGTATCGAAGTCGCCACACCCCGGGATG
171 TTA--AGGA-AC-CGAA-GTT-AT-AAAAGAACTCGTAAAAGTTTGACAAG
* * ** ** * ** * *
11920536 -GT-AAACTGAGTGATAAG-ACAAATTTTGA-ATGCCACAAACTT-TGAAG-AAAT---TTTGAT
1 TTTGAAAGTTCGT-CCAAGAACCAA----GAGA-GATAC-AA-TTCTCACGTAAATAAGTTT--T
** * ** * * * * ** **
11920592 AAGTTCGAACAGTTC-AACGAAG-AACCAAGA-GAGAAA-TATTCT-CA-CAAATGAT-TTAAAT
56 AA-TTC-AA-AGACCAAAAGTTGTTA-CAAAATGACAAACTATT-TGGACCAAATGATGCGATTT
* **** * * ** * ** * *
11920650 -TCAAGCA---AA-GTT-TTTTATTTTAAC-ATAGTGATTTAGGAT-GAAATT-TATAGGTTTGA
116 CTCGAGCATGGAATGTTCGGGAAATGTCTCGA-AG-GA-AT-GGATCG-TCTTGAATA-CTTT-A
* * * * * * * *
11920706 ATTG-ACCTTTCAAGTTCCTGAATG-ACCCTTCAAA--TT--C-AG
174 A-GGAACC---GAAGTT-ATAAAAGAACTCGTAAAAGTTTGACAAG
* * * * * * * * ** * * ** * *
11920745 TCTT-TAACTAAC-T-TAA-AAAC-AGACCA-TTA-AATT-TGATTTAACTCA-TGAT-A-GC-T
1 T-TTGAAAGT-TCGTCCAAGAACCAAGA-GAGATACAATTCTCACGTAAATAAGTTTTAATTCAA
* * ** * ** * ** * ** * * *
11920798 AGCCCAAAAGTCATGTCT-CTTCACTTGTCTTTGAGTAGAT-GA-GAGGTCATGTC-TTTTCATA
63 AGACCAAAAGT--TGT-TAC--AAAATGAC--AAACTATTTGGACCAAATGATG-CGATTTC-TC
** * *** ** * ** * * ** * * *
11920859 GTCCATGG-TTAGCTTAAAAGTCATCTTCTTTATGAAAGCTTAATGGTCCTT-AAAAGGTGTTGT
119 GAGCATGGAAT-G-TT-CGGGAAAT-GTCTCGAAGGAA--TGGATCGT-CTTGAATA---CTT-T
** * * * ** ** *** * * ** * ** *
11920922 TTGTAGTCTCTTCATCTTCCATAACCGGTTGTCTTTATTGCTTGTGATG
173 AAGGA-AC-C--GAAGTT--ATAA-AAGAACTCGTAAAAGTTTGACAAG
** * * ** ** * * * *** *
11920971 CCATG-AA-TTGGTCTTTAA-ATGCTTGAAACCGAT-CAGATT-TGAAG--AGCCACTCTTGGTC
1 -TTTGAAAGTTCGTC--CAAGAACCAAGAGA--GATACA-ATTCTCACGTAAATAAGT-TT--T-
* ** * * * * ** * * ** ** *
11921029 CATTTGAATAGTCACAA--TG-CATCAATTTTGA-AAGCTGATTCTTGAATAAATTTTGTGCATT
56 AATTCAAAGA-CCAAAAGTTGTTA-CAA-AATGACAAACT-ATT-TGGACCAAATGATGCG-ATT
* * * ** *** *** * **** * ** * *** **
11921090 TATTC-ACCTTCAAAATCCACCAAAAACGTCCTCTTCTTGTA-CCAGCAAATT-AAGTGAC-CAA
115 T-CTCGAGCAT-GGAATGTTCGGGAAATGT-CTC-GAAGGAATGGATCGTCTTGAA-T-ACTTTA
* ** * * *
11921151 ATGCAAACC--TTTTCATGCAAA-AAC-CG-AACAACCTTTG--TA-
174 A-G-GAACCGAAGTT-AT-AAAAGAACTCGTAA-AA-GTTTGACAAG
* * * * ** * *
11921190 TGTGAATG-TC--CCTAGATCTTCTTACCAGCCGA-A-AA-TCATTC-C-TAAA-ACA-TATTAA
1 TTTGAAAGTTCGTCCAAGAAC--C--AAGAG-AGATACAATTC--TCACGTAAATA-AGT-TT-T
* * ** * ** * *
11921245 ACATGCATTAAGACAATTTAAACATGCCAATAAGCTAAAATGA-ATTGAACAGTCACCTAGACAA
56 A-ATTCA--AAGACCA---AAAGTTG----TTA-C-AAAATGACA---AAC--T-ATTTGGACCA
* ** * * * * *** ** *
11921309 GAATAAAT-AAATATT-T-AAACATTTGCAACCTGTTC---AAAT-TCT-TATTTAACTTAAAAC
103 -AAT-GATGCGAT-TTCTCGAGCA--TGGAA--TGTTCGGGAAATGTCTCGAAGGAA--TGGATC
** * * * * * * * * *
11921366 ACCCT--AT--TTATAA-TAA---AA-ATA-AACACACTAACTCAT-GATGTTTTAATGAATGG
159 GTCTTGAATACTT-TAAGGAACCGAAGTTATAA-A-A-GAACTCGTAAAAG-TTTGA-CAA--G
* ** * * * * *
11921419 TTT-AAAGATGCAAACTAAATGAACTAATG-GA-TTACTAAATGCATGACTTGATTTAATGATGC
1 TTTGAAAG-TTC-GTC-CAA-GAACCAA-GAGAGATAC--AATTC-TCAC--G---TAA--AT--
** * * * * * ** * * * *
11921481 AAACTTTAACT-AACGTGGGAGTTA-CATAATGCATGATAGGATTTATGATACA-TATTT-AACT
49 AAGTTTTAATTCAA------AG--ACCA-AAAG-TTGTTA-CA-AAATGACAAACTATTTGGACC
** * ** * * *
11921542 AATAT-ATAAG-TTACTTAATGCATGTCATTAT-TTATGATGCAAACT-TAACTGATCATGAGAG
102 AA-ATGATGCGATTTCTCGA-GCATG-GA--ATGTT-CG--GGAAA-TGT--C---TC--GA-AG
* * * * * * ** * ** * **
11921603 TTAATGGAT-GTC---ATTAC-ATAATGCA-TGACTTTATTAAATGCAGA-TCACATAATGCATG
150 -GAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTA-TAAAAG-A-ACTCGTA-AAAGTTTG
*
11921661 TCATA-
210 ACA-AG
* * ** * ** * *
11921666 TTTAAAAGAT-GT---AG-ATTAATA-ATGCATGAC-A---T-AATTAAATCACAATCTTAA-T-
1 TTTGAAAGTTCGTCCAAGAACCAAGAGA-G-AT-ACAATTCTCACGTAAAT-A-AGTTTTAATTC
* * * * ** * * * ** * * *
11921718 AAACA-TAAGAGATGCTTTTATGAATGACTTAATTAAATGCA-AAACACTTAATGCAAGACATAA
61 AAAGACCAAAAGTTG-TTACA-AAATGAC-AAACTATTTGGACCAA-A--TGATGC--G--AT--
*** *** * * ** ** ** ** ** ** * *
11921781 TTAAAGATGCAAACACTTATTAAAC-TAAAATAAAACTTAAATAAAATTAAAAAGTCCTTAAAAA
114 TTCTCGA-GCATGGA-ATGTT---CGGGAAAT--GTCTCGAA-GGAA-TGGATCGT-CTTGAATA
* * * * ** * * *
11921845 CATT-A-G--CCCAA-TAATCAATCAGGCCT-GTGAGATGTTT--C-AT
169 CTTTAAGGAACCGAAGTTAT-AA-AAGAACTCGT-AAAAGTTTGACAAG
* * * * * * *** * ** * *
11921885 TTTG-CACTTGGGCC----CCTCATGTTTGGT-CAA-TCT--CG---ATATCTTCTAATTGCATC
1 TTTGAAAGTTCGTCCAAGAAC-CAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATT-CA-A
* * * * * * * * * * ** * * **
11921938 ATAACATGATGTGACCGTGCTCACATCACCAGGAGAGATTATATTCTCACGTAAAT-AAG-TTTT
63 AGACCA-AAAGT-----TG-TTACA--A-AATGACAAACTAT-TT-GGAC-CAAATGATGCGATT
* * **** **** * * ** * **** *
11922001 TAATTCAAAGCCCAAAATTTGTTTACAAAATG--ACAAACTATTTGGA-CCAAATGAA-GCGATT
115 T--CTC-GAGCATGGAA--TGTTCGGGAAATGTCTCGAAGGA-ATGGATCGTCTTGAATAC--TT
** * ** ** * * * *
11922062 TCCTGTGCATGGAATGTTCGGGAAATG-TCTCGAAGGAAAG---GATCATG
172 T-AAG-GAACCGAA-GTT--ATAAAAGAACTCGTA--AAAGTTTGA-CAAG
* * * ** *
11922109 -TTGAATACTT--T--AAGGAA--TAGA-AGTTATAAAAGAACT--CGT-AA-AAGTTTGACAAG
1 TTTGAA-AGTTCGTCCAA-GAACCAAGAGAG--ATACAA-TTCTCACGTAAATAAGTTT--TAA-
** * * * * * ** * *
11922162 TTCGTCCAATA-ACCATTAG-AGATACAATTTTCATGTAAATAAGT-TTTTAATTCAAA-GA-CC
58 -T--T-CAA-AGACCAAAAGTTGTTACAA----AATG-ACA-AACTATTTGGA-CCAAATGATGC
* * ** * * * * ** * * *
11922222 AAAGTTGTTTAC-AAAATGACAAACTATT-GGACCAAATGAGGCGATTTCCCATGCATGGATTGT
111 -GA-TT-TCT-CGAGCATG--GAA-TGTTCGG--GAAAT-----G-TCTCGAAGGAATGGATCG-
** * * *
11922285 TCGAGAAATGTCTTGAAGGAAATGGATCGTCTTGAATACTATAAGGAACCGAGGTTATAAAAGAA
160 TCTTG-AAT-ACTTTAAGG--A---A-C--C--G-A-AGT-T--------------ATAAAAGAA
*
11922350 CTCGTAAAAATTTGACAAG
196 CTCGTAAAAGTTTGACAAG
* * **
11922369 TTTGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGATTTAATTTGAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA-GTTTTAATTCAAAG
* * * *
11922434 ACCAAAACTTGATTACAAAACGACAAACTATTTTGACCAAATGATGCGATTTCACGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * *
11922499 TGTTTGAAAAATAG-CTTGAAGGAATGGATCGTCTTGATTACTTTAAGGAACCGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11922563 GAACTCGTAAAAGTTTGACAAC
193 GAACTCGTAAAAGTTTGACAAG
** * * * *
11922585 TTCCAAAGTTCATCCAAGAACCTAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11922650 ACCAAAACTTGGTTAC-AAATGGCAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * * * * *
11922714 TGCTCGAAAAATAG-CTCAAAGGAATGGATCATCTTCAATA-ATTAAGGAACCAAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11922777 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * * * *
11922799 TTGGGAAGTTCAT-CAAGGAACCAGGAGAGATTA-TATTCTCACGTAAATAAGTTTTTAAATGAA
1 TTTGAAAGTTCGTCCAA-GAACCAAGAGAGA-TACAATTCTCACGTAAATAAG-TTTTAATTCAA
* * * *
11922862 AGACTAAAAGTTGTGTACAAAATGACAAA-TAATTTGGACCAAAAGATGCGACTTC-CTGAGCAC
63 AGACCAAAAGTTGT-TACAAAATGACAAACT-ATTTGGACCAAATGATGCGATTTCTC-GAGCAT
* * * * * *
11922925 GGAATGCTCAGGAAATGTCTCAAAGAAATTGATCGTCTTGAATACTTTAAGGAACCAAAGTTGA-
125 GGAATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTT-AT
*
11922989 AAAAGAACTCGTGAAAGTTTGAC---
189 AAAAGAACTCGTAAAAGTTTGACAAG
* *
11923012 -----AAGTTCGTCCTAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * *
11923072 ACAAAAAGTAGTTTGCAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * * * **
11923137 TGTTCGAAAAATAG-CTTGAAGGAATCGATCATCTTGAATACTTTAAGGAACTAAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11923201 GAACTCGTAAAAGTCTGGCAAG
193 GAACTCGTAAAAGTTTGACAAG
*
11923223 TTTGAAAGTTCGTCCCAA-AACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGT-CCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* *
11923287 GACC------T-TTGCAAAATGACAAACTATTTGGGCCAAAT-ATGCGATTTCTCGAGCATGGAA
64 GACCAAAAGTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* *** * * **
11923344 TGCTCAAAAAATAG-CTTGAAGGAATGGATAGTCTTGAATACTTTAAGGAATTGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11923408 AAACTCGTAAAAGTCTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * *
11923430 TTCGAAAGTTCGTCCAAGGACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11923495 ACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * * * *
11923559 TGTTCGAAAAATAG-CTCGAAGGCATGGATCGT-TGTGAATACTGTAAGGAACTGGAGTTATAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCT-TGAATACTTTAAGGAACCGAAGTTATAAA
*
11923622 AGAAGTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * *
11923645 --T-----TT-GTCCAAGAACCAAGAGAGATACAGTTCTTATGTAAATTAGTGTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGT-TTTAATTCAAAG
* * * *
11923702 ACAAAAAGCTGGTTAC-AAATGACAAACTATTTGGACCAAATAATGCAATTTCTC--G-A-GGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * *
11923762 TGCTT-GGTAAATAG-CTCGAATGAATGGATAGTCTTGAATACTTTCAGGAACTGAAGTTATAAA
129 TG-TTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
11923825 AGAACTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * *
11923848 TTCGGAAGTTCGTCAAAGAACCAGGAGAGATTA-TATTCTCACGTAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * *
11923912 GCCCAAAAG-TGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCGATTTC-CTGTGCATGG
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGG
* * * *
11923975 AATGTTCGGGAAATGTCTCAAAAAGGAAAGGATCGTGTTGAATACTTTAAGGAACAGAAGTTATA
127 AATGTTCGGGAAATGTCTC--GAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATA
*
11924040 AAAGAACTCGTAAAATTTTGAC---
190 AAAGAACTCGTAAAAGTTTGACAAG
** * *
11924062 -----AAGTTCGTCCAAGAACCATTAGAGATACAATTTTCACGTAAATAAGTTTTTAATTTAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11924122 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGGGATTTC-CCATGCATAGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGA
* * * * *
11924186 TTGTTTGAGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTATAAGGAATCGAAGTTATAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11924251 GAACTCGTAAAAATTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * *
11924273 TTTGGAAGTTCGTCCAAGAACC-AGAGAGATACAATTCTCAC--AAATAAGGATTTAATTCGAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA-GTTTTAATTCAAAG
* *
11924335 ACCAAAAGTTGTTTACAAAATGACAAACTATTTCGACCAAATGATGCGATTTCACGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
*** *
11924400 TGTTCAAAAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11924464 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * * * * *
11924486 TTCCAATGTTCATCCGAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAGAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * *
11924551 ACCAAAACCTGGTTAC-AAATGAC-AACATATTTGGACCAAATGATGCAATTTCCCGAGCATGAA
65 ACCAAAA-GTTGTTACAAAATGACAAAC-TATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * *
11924614 ATGCTCGAGAAAT-TGCTCGAAGGAATGGATCATCTTGAATATTTTAAGGAACCGAAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
11924678 AGAACTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * *
11924701 TTCGAAAGTTCCT-AAAGGAACC---AG-G--ACAA-TCTCAC--ATATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAA-GAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * ** * *
11924756 GACCAAAAGTTGTGTACAAAATGTCAAACAATTTGGACCAAATGATGTAACTTCCCGAGCATGGA
64 GACCAAAAGTTGT-TACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * ** *
11924821 ATGTTCGAGAAATGTATCGAAGGAAAGGATCGTGATGAATGCTTTAAGGAACCGAAGTTATAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11924886 GATCTCGTAAAAGTTTGAC---
193 GAACTCGTAAAAGTTTGACAAG
* * * * *
11924905 -----AAGTTCGTCCTAGAACCAAGAAAGATACAATTCTCACATATATAAGTTTTTATTCAAAGA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAGA
* * * *
11924965 CCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATAATACGATTTCCCGAGCATGGAAT
66 CCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAAT
* ** * * *
11925030 GTTTGAAAAATAG-CTTGAAGGAATGGATCGTCTTGAGTACTTTAAGGAACTGAAGTTATAAAAG
130 GTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
* *
11925094 AACTCTTAAAAGTTTAACAAG
194 AACTCGTAAAAGTTTGACAAG
** * *
11925115 TTCCAAAGTTCATCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * *
11925180 ACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGAACAAGTGATGCAATTTCTCGAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * ** * *
11925244 TGCTCGGAAAACT-ACTCGTAGGAATGGGCCTTCTTGAATACTTTAAGGAACCAAAGTTATAAAA
129 TGTTCGGGAAA-TGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11925308 GAACTCAT-AAAGTTTGACCA-
193 GAACTCGTAAAAGTTTGACAAG
* * * * * *
11925328 TTTCGAAAGTTTGTCAAAGAACTAGGAGAGATTA-TATTCTTACGTAAATAAGTTTTTAATTCAA
1 TTT-GAAAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAG-TTTTAATTCAA
* * * * *
11925392 AGCCCAAAAGTTGTTTACAAAATGACAAACAATTTGGACCAAATAATGCGACTTCCCGAGCATGG
63 AGACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* ** * * * **
11925457 AATGTTCGGGAAATGTCTCGAAGGAAAGGATC-TAACATAAAAGATCTCGTAA-AATAGTGACAA
127 AATGTTCGGGAAATGTCTCGAAGGAATGGATCGT--C-TTGAATA-CT-TTAAGGA-ACCG--AA
* *** * *
11925520 GTTCGTCTTAGAAC-CAAG-AGGGATACAATTCTAACATA-
184 GTT-ATAAAAGAACTC--GTA---A-A-AGTT-TGACA-AG
** * ** * * * ** * ** *
11925558 AAT-AAATTTTTAATTCAA-AGACCAAAAGTAGTTTACAA-AATGAC--AAACT-A-TTTGGA-C
1 TTTGAAA--GTTCGTCCAAGA-ACCAAGAG-AG-ATACAATTCTCACGTAAA-TAAGTTTTAATT
* **** * * * * * ***
11925615 CAAGTGA-TGTGATTTCTCGAGCATGGAAAGTTTGA-AAAATAGCTT-GAAGGAATGGAT-CG--
60 CAA-AGACCAAAAGTTGT-TA-CA---AAA---TGACAAACTA-TTTGGACCAAAT-GATGCGAT
* * ** ** * * * *
11925674 -TCTTGA--AT--ACT-TTAAGGAATCGATGT-TATAA--AA-GAAT--TCGT-AAAAGTTTGAC
114 TTCTCGAGCATGGAATGTTCGGGAA---ATGTCTCGAAGGAATGGATCGTCTTGAATACTTT-A-
* ** * ** * * ** ** *
11925726 AAGTTCCAAAGTTAGTCCAAGAACTAGGAGAGATACAATTCTCACG
174 AGGAACCGAAGTTA-TAAAAGAACTCGTA-A-A-A-GTTTGACAAG
* ** ** * * * ** * * * * *
11925772 TGATGTGAGCACGGT-C-A-CATCATGTTATGATGCAATTC-AAAG-ATATCGAGATTTGCCTAA
1 T-TTGAAAGTTC-GTCCAAGAACCAAGAGA-GATACAATTCTCACGTAAAT-AAG-TTT---TAA
* * * * * ** *
11925832 -ACACGAGGGGCC-CAAG-TG---CAAAATGA-ATCATCTCA-CAGG-CC---TGAT-TGATTAT
58 TTCA--A-AGACCAAAAGTTGTTACAAAATGACA--AACT-ATTTGGACCAAATGATGCGATT-T
* ** * ** *** ** * * * *
11925884 -T-GGGC-T--AATGTTTTTAAGG-ACT-T-TTTAATTTTATTTA-AGT-TTTATTTTAGTTTAA
116 CTCGAGCATGGAATG---TTCGGGAAATGTCTCGAA-GGAATGGATCGTCTTGA--ATACTTTAA
* ** ** * * * * **
11925939 -TAAGTGTTTGCATCTTTAATTATG-TCTTGCATTAAGTGTTTTG-C-A-
175 GGAACCG-AAG--T-TATAA--AAGAAC-T-C-GTAAAAG-TTTGACAAG
* * * * * ** * * * * ** *
11925984 TTTAATTAAG-TCATTC-ATAA--AAG-CATCTCCTATGTTTAAC-TATGTCATGCATTATTAA-
1 TTTGA--AAGTTCGTCCAAGAACCAAGAGAGATACAAT-TCTCACGTAAAT-AAG--TT-TTAAT
* * ** * * ** ** * **
11926042 TCTACA-TCTTTTAAA-TATGACATGCATTATG-TGATCTGCATTT--AATAAAGTCG-TGC-AT
59 TC-AAAGAC--CAAAAGT-TG--TTACAAAATGACAAACT--ATTTGGACCAAA-T-GATGCGAT
* * ** ** ** * ** * * *
11926100 TATAT-AATGACATCCATTAACTCTCATG-ATTAGT-T--AA-GTTTGCATCATAAATAATGACA
114 T-TCTCGA-G-CATGGA--ATGT-TCGGGAAAT-GTCTCGAAGGAATGGATCGT--CT--TGA-A
* * * * * *
11926159 TGCATTAAGTAACTTAC-AAGTTAGTTAAATATGCA-TCAT-AAA-TCCT-ATC-A-
167 TACTTTAAGGAAC---CGAAGTTA--TAAA-A-GAACTCGTAAAAGT-TTGA-CAAG
* * *** * ** * * * **
11926209 --TG-CA-TTATGT--AACTCCCATGTTAGTTA-AAGTT-TGCATCATTAAATCAAGTCATGCAT
1 TTTGAAAGTT-CGTCCAAGAACCAAGAGAGATACAA-TTCT-CA-C-GTAAAT-AAGT-TTTAAT
* * * ** * *** * ** * ** ** *
11926266 TTAGTAA-TCGATTAGTTCATT-CAGTTTGCATCTTTAAACCATTCATTAAAGCATCTTCTGTG-
59 TCA--AAGACCAAAAGTT-GTTACAAAATG-A-C---AAACTA-T--TTGGACCAAATGATGCGA
* ** ** ** * ** * ** * *
11926328 TTTATTTAGTTTAAACATGAGTTAGTGTGTTAT-TTTC-ATTATAAATAGGGT-GT-TT---TAA
113 TTTCTCGAGCATGGA-AT--GTTCG-G-GAAATGTCTCGA--AGGAAT-GGATCGTCTTGAATAC
* ** * * * * * * *
11926386 GTTAAATAA--GAACTT-GAACAG--GTTGCAAATGTTT-A-AA-
170 TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG
* * * * * *** ** * ** * *
11926423 TATTCATTTA-TTCTTGTCTAGGTGACTGTTCAATTCATTTTAGCTTATTGGCATGTTTAAAT-T
1 T-TTGA--AAGTTC--GTCCAAG-AAC----CAAGAGA-GATA-C-AATTCTCACG--TAAATAA
* * * *** * ** **** *** ** * *
11926486 GTCTTAATGC-ATGTTTAATATGTT-TTA-GGAATGA-TTTTTGGCTGGTAAGAAGAT-CTAGGG
51 GTTTTAATTCAAAGACCAA-AAGTTGTTACAAAATGACAAACTATTTGG-ACCAA-ATGAT-GCG
* * * * * **** ** * *
11926546 ACGTTCAC-ATACAAAGG-TTGTTCGGTTTTTG-CAT-GAAAAGGTTTGCATTTGGTCACTT-AA
112 A-TTTCTCGA-GC-ATGGAATGTTCGGGAAATGTC-TCG--AAGGAATGGA--TCGT--CTTGAA
* * * ** * * **** * * ** * * *
11926606 TTTGCTGGTACAAGAAGAGGATGTTTTTGGTGGA-T-TTTGAAG-GTGAATAAA
167 --TACT-TTA-AGGAA-CCGAAGTTATAAAAGAACTCGTAAAAGTTTG-ACAAG
*** * * * * ** * * ** * **
11926657 TGCACAAAATTCATTCAAGAATC---AG-CTTTCAATAT-TGA--TGCAT-TGTGACT-ATTCAA
1 T-TTGAAAGTTCGTCCAAGAACCAAGAGAGATACAAT-TCTCACGTAAATAAGT-TTTAATTCAA
* * * * ** * *
11926713 ATGGACCAAGAGTGGCTCTTCAAATCTGATCGGTTTCAAGCACT-TAAAGG-CCAATTCATG-GC
63 A--GACCAAAAGTTG-T-TACAAA----AT--G--ACAA--ACTAT-TTGGACCAAATGATGCG-
* * * * * * * * *** *
11926775 A--TCACAAGCAAT--AAAGATAAC-CG--AT-TATGGAAGATGAAGGGA-C-TACAAACAACAC
112 ATTTCTCGAGC-ATGGAATG-T-TCGGGAAATGTCTCGAAG--GAATGGATCGT-C-TTGAATA-
* * *
11926830 CTTTAAGG-ACCATTAAGCTT-TCATA-AA---G-AAAA---TGAC---
169 CTTTAAGGAACC--GAAG-TTATAAAAGAACTCGTAAAAGTTTGACAAG
* * ** * * * * * * * * ** *
11926866 TTT-TAAGCT-AACCATGGACTATGA-AAAGACATGACCTCTCATC-T-ACTCAAAG--ACAAGT
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACA--A-TTCTCA-CGTAAAT--AAGTTTTAATT
* ** * ***** * * * ** * * * *
11926924 GAAGAGA-CATGACTT-TTGGGCTA-G-CCATCATGAGTTAAATCAAATTTAATGGTCTATTTTT
60 CAA-AGACCAAAAGTTGTTACAAAATGACAAAC-T-ATTTGGACCAAA--TGAT-G-CGATTTCT
* * * * * ** * *
11926985 AAGTTAGTTAAATGGCCGAAT-TTGAAGGGTCAAATAGGAACTTGAAAGGTCAATTCA-GGCCTA
118 -CG--AG---CAT-G--GAATGTT--CGGG--AAAT--G-TCTCG-AAGG--AATGGATCGTCT-
* * * *** * * * * * ** * *
11927048 TAAATTTCGTCCTAAATCACC-ATGTTAAAAAAAAAAATTGCTTGAA-TTT-AAATCAT
163 TGAA-TAC-T-TTAAGGAACCGAAGTT-ATAAAAGAACTCG-TAAAAGTTTGACA--AG
* ** ** *** ** ** * * ** *
11927104 TTGTGAGAATATTTC-TCTCTTGGTTCTTCG-TTGA-ACTGTT-TGAAC-T-TATCAAACTTT-C
1 TT-T--GAA-AGTTCGTC-C-AAGAACCAAGAGAGATACAATTCT-CACGTAAAT-AAGTTTTAA
* ** ** * ** ***
11927162 TTCAAAGTTTGTGATGCTCAAAATTTG-T-C-TTAT--CACTCTGTTTACCATCCCGGGGTG-TG
58 TTCAAA------GA--C-CAAAAGTTGTTACAAAATGACAAACTATTT-GGA--CC-AAATGAT-
* * ** * * * * ** * *
11927221 GCGA-CT-TCGATACA-CCAA-GATTCGAGTATATG-GTC-AAGTTTAACCG-T-GTCGT-AGT-
109 GCGATTTCTCGA-GCATGGAATG-TTCG-GGAAATGTCTCGAAG--GAATGGATCGTCTTGAATA
* * * * * * ** *
11927276 -TTTAA-TATAGCTACAGTTCCTTAAAGAATTC--AAGTGCTT--CGAA-
169 CTTTAAGGA-ACCGA-AGTT-ATAAAAGAACTCGTAAAAGTTTGAC-AAG
* ** **** * * * *
11927319 -TT-AAGGTTTC-TACCTTGTGAACCATTTCA-AGACGATTTTTC-C---AACAAGCTGTTT--T
1 TTTGAAAG-TTCGT-CC--AAGAACCAAGAGAGATAC-AATTCTCACGTAAATAAG-T-TTTAAT
* * * * * ** * * * * * *** *
11927374 TCGAA-CCCTCAAAG-T-TCAGAAGCTCAC-ATC-ATCTTGTA--AATAAGTTTTTAATTCAAT-
59 TCAAAGACC-AAAAGTTGTTACAAAATGACAAACTAT-TTGGACCAA-ATGATGCGATTTC--TC
* * **** * * * ** * ***
11927431 GACCA--AAAGTTGTTTACAAAATG--ACGAA-CAATTTGGA-CCTAATG-ATGCGATTTCTCGA
119 GAGCATGGAA--TGTTCGGGAAATGTCTCGAAGGAA--TGGATCGTCTTGAATAC--TTTAAGGA
* * *** * * *
11927489 GCATGAAATGCTCGGGAAATG-TCTCG-AAGGAA--TGGATC--G
178 AC-CG-AA-G-T-TATAAAAGAACTCGTAA--AAGTTTGA-CAAG
* * ** * ** **
11927528 TGTTGAATACTT--T--AAGGAACCGA-AGTTATAAAAGAACT--CGT-AA-AAGTTTGCCATGT
1 T-TTGAA-AGTTCGTCCAA-GAACCAAGAGAGATACAA-TTCTCACGTAAATAAGTTT----TAA
* ** * * * * ** * ***
11927584 TCGTCCAAGAACCATGAG-AGATACAATTATTACGTAAA-TAAGTTTTTAATTCAAA-GACTAAA
58 T--TCAAAG-ACCAAAAGTTGTTACAA-AATGAC--AAACT-A--TTTGGA-CCAAATGA-TGCG
* * ** * * * * * ** *
11927646 AGTTGTTTA-CA--AAATG-AC---AAATCATTTGGAACAAAT-GATGCGATTTCTAGAGCATGA
112 ATTTCTCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAATGGAT-CG---TCTTGA--AT-A
* ** * * *** * *
11927703 ATATTCGAAAAATAGCTCGAAG----GAAAGAA-TTGTCTTTAGTACTTTA-AGG
169 CT-TT--AAGGA-A-C-CGAAGTTATAAAAGAACTCGT-AAAAGT--TTGACAAG
** * ** * * * * * *
11927752 AATCAAAGTT--TAAAAAGAACACGTAAAAGTTTTACAAGTTCGGAAGTTCGTCCAAGAACCAAG
1 TTTGAAAGTTCGT-CCAAGAAC-C--AAGAG----A-GA-TAC--AA-TTC-T-CACGTA--AAT
*** * ** * ** * **
11927815 AGAGAAATAATTCTCTATTA--AATAAGTTTTTAGTTTAAA-GACCAA-TAGTTGTTTA-CAAAT
49 A-AGTTTTAA-T-TCAAAGACCAA-AAGTTGTTA--CAAAATGACAAACTA-TT-TGGACCAAAT
* * * * * * * ** ***
11927875 GA--CAAACTATT-TGGACCA--G-ATGAT-GTG--ATTTC-CTG-A-GCATGGAATACCCCAAA
106 GATGC-GA-T-TTCTCGAGCATGGAATGTTCGGGAAATGTCTC-GAAGGAATGG-AT-CGTCTTG
* ** * * ** * * *
11927928 AATAGCTTGAAGGAAAGGATCGTGTTGAATACTTTTAGGAACCGAAGTTATAAAAGAACTCGTAA
165 AATA-CTTTAAGGAACCGA---AGTT--ATA-----A--AA--GAACTCGTAAAAG--TTTG-AC
11927993 AAG
212 AAG
* * *
11927996 TTTGACAAGTTCGTCCTAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTTAAA
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* *
11928061 GACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATACGATTTCTCGAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
** * * * *
11928126 ATGTTCGAAAAATAG-CTCGAAGGAATGGATCGTCGTGAATACTTCAAGGAACCAAAGCTATAAA
128 ATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11928190 AGAAGTCGTAAAAGTTTGAC---
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11928210 -----AAGTTCGTCCAAGAACCAAGACAGATACAATTCTCATGTAAATTAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* **
11928270 ACCAAAAGCTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGCGA-TTCTCGATAATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * *
11928333 TGCTCGGTAAATAG-CTCAAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAACTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AAA
*
11928397 AAAACTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * *
11928420 TTCGAAAGTTCGT-CTAGTAGCCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAT
1 TTTGAAAGTTCGTCCAAG-AACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * *
11928484 GACCAAAAGTTGTTTAAAAAATGACAAACCATTTGGACCAAATGAAGCGATTTC-CTGTA-CATG
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-G-AGCATG
* * * * * *
11928547 GAATGTTCGGGAAATGTCTAGAAGGAAAGGATCATGTTGAATACTTTAAGGAACAGAAGATA-AA
126 GAATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* *
11928611 ACAAAACTCATAAAAGTTTGAC---
191 A-AGAACTCGTAAAAGTTTGACAAG
* * * * *
11928633 -----AAGTTCATCCAAGAACCATGAGAGATTA-TATTCTCACGTAAATAAATTTTTAATTTAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAAT-AAGTTTTAATTCAAA
* * * * *
11928692 GACCAGAAGTTGTTTACAAAATGACAAA-TAATTTGGACCAAATGATGCGACTTCCCTAGTATGG
64 GACCAAAAGTTG-TTACAAAATGACAAACT-ATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* * * * * * *
11928756 AATGTTTGGGAAATGT-ACGAAAGAAAGGATCATGTTGAATACTTTAAGGAACCGAACTTATAAA
127 AATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
11928820 AGAACTCGTAAAAGTTTGAC---
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11928840 -----AAGCTCGTCCTAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAC
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA-
* * *
11928900 G-CCAAAAGTAGTTTACAAAAGGACAAACTATTTGGA-CAATATGATGCGATTTCTTGAGCATGG
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGAGCATGG
* * * *
11928963 AATGTTCGTGAAATAG-CTTGAAGGAATGGATTGTCTTGAATACTTTAAGGAACTGAAGTTATAA
127 AATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* *
11929027 AAGAACTCTTAAAAGTTTCACAAG
191 AAGAACTCGTAAAAGTTTGACAAG
** *
11929051 TTCCAAAGTTC-TACCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGT-CCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * * * * *
11929115 GACCAAAACCTAGTTAC-AAATGACAACCTATTTGAACCAAGTGATGCGATTTCTCGAGCATAGA
64 GACCAAAA-GTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* ** * * *
11929179 ATGCTCGAAAAAT-TGCTCGAAGGATTGGATCGTCTTGAATAATTTAAGGAACCGATGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11929243 AGAACTCGTAAAAGTTTGACCAT
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * *
11929266 TTTAAAAGTTTGTCAAAGAACCAGGAGAGATTA-TATTCTCACGTAAATAAGTTTTTAATTAAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * * * * * *
11929330 TACCAAAAGTTGTTTACGAAATGACAAACAATTTGGACCAAATGATGCAACTTCCCGAGCATGGT
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * * * *
11929395 ATGTTCGGGAAATGTCTCGAAAGAAAGGATCGTGTTGAATACTTTAAGTAACCGAAGGTATAAAT
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11929460 GAAACTCGTAGAAGTTTGAC---
193 G-AACTCGTAAAAGTTTGACAAG
* * **
11929480 -----AAGTTCGTCCTAGAACCAAGGGAGATACAATTCTCACAAAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11929540 ACCAAAAGTAGTTTACAAAATGAATGACAAACTATTTAGACTAAATGATGCGATTTCTCGAGCAT
65 ACCAAAAGTTG-TTAC--AA--AATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCAT
*** * * * *
11929605 GGAATGTTCAAAAAATAG-CTTGAAGGAATTGATCATCTTGAATACTTTAAGGAACTGAAGTTAT
125 GGAATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT
11929669 AAAA-AACTCGTAAAAGTTTGACAAG
189 AAAAGAACTCGTAAAAGTTTGACAAG
** * * * **
11929694 TTCCAAA-ATCGACCAAGAACCAAGAGGGATACAATTCTCATTTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
** * * *
11929758 A-TGAAAGTTGGTTAC-AAATGATAACCTATTTGGACCAAATGATACGATTTCTCGAGCATGGAA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** **
11929821 TGCTCGAAAAAT-TGCTCGAAGGAATGGATCACCTTGAATACTTTAAGGAACCGAAGTTATAAAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11929885 GAACTCGTAAAAATTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * * * * *
11929907 TTCAAAAGTTCGTCCTAA-AACCAGGAGAGATACAATTCACATGTAAATAAGTTTTAAATCAATG
1 TTTGAAAGTTCGTCC-AAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAG
* * *
11929971 ACCAAATGTTGTTTACAAAATGACGAAA-TATTTGGACCAAATGATGCGATTTCGCGAACATGGA
65 ACCAAAAGTTG-TTACAAAATGAC-AAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * * * * * * **
11930035 ACGTTTGGGAATTGTCTCAAAGGAAAGGATCGTGTTTAATAC-ATAAGGAATAGAAGTTATAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* * *
11930099 GGATTCATAAAAGTTTGAC---
193 GAACTCGTAAAAGTTTGACAAG
* * * * **
11930118 -----AAGTTCCTCTAAGAA-CAGGAGGGATACAATAATCACGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11930177 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAGCAAATGATGCGATTTCCCGAGCATGG-A
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * ** *
11930241 TGTTCGAAAAATAG-CTTGAAGGAATGGATCGTCACGAATACTTTAAGGAACTGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11930305 CAACTCTTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * *
11930327 TTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATAAGTTGTTAATTCGAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTT-TTAATTCAAAG
* * *
11930392 ACCAAAAGATGGTTAC-AAATGACAACCTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
*** * * * *
11930456 TGTTCTAAAAATAG-CTTGAAGGAATGGATCATCGTAAATACTTTAAGGAA-C-------TAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11930512 GAAGTCGTAAAAGTTTGAC-A-
193 GAACTCGTAAAAGTTTGACAAG
* *
11930532 --T----GTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
*
11930591 ACCAAAAGCTAGTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTC--G-A-GGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * *
11930651 TGCTCGGTAAATAG-CTCGAAGGAATGGATCCTCTTGAATACTTTAAGGAATCGAAGTTACAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11930715 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * *
11930737 TTCGGAAGTTCGTCAAAGAACCATGAGAGATA-ATATTCTCACATAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACA-ATTCTCACGTAAATAAG-TTTTAATTCAAA
* * ** ** * *
11930801 GACC-AAAGATAT-TTACAAAATGACAAACAATTTAGACCAAATGATATGACATCCCGAGCAAGG
64 GACCAAAAG-T-TGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* ** * * * *
11930864 AATGTTTGGGAAATGTCTCGATA-GAAAAGATTGTGTTCAATACTTTAAGGAA-CGAAGTTATGA
127 AATGTTCGGGAAATGTCTCGA-AGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
11930927 AAGAACTCGTAAAAGTTTGAC---
191 AAGAACTCGTAAAAGTTTGACAAG
* * * * * *
11930948 -----AAGTTCATCCTAGAAGCAACAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAC
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11931008 ACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTTGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * *
11931073 TGTTCGAGAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11931137 GAACTCTTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * * *
11931159 TTCCAAAGTTCGACCAAGAA-C-AGAGAGATACCAATTCTCATGTAAATAAGTTTTTAATTTAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATA-CAATTCTCACGTAAATAAG-TTTTAATTCAAA
* ** * * *
11931222 GACCAAAAGTTGGTTAC-AAATGGCAGCCTATTTGGACCAAGTGATGCAATTTTTCGAGCATGGA
64 GACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* ***
11931286 ATGCTCAAAAAAT-TGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* * *
11931349 AGAACTCATAAAATTTTGACCA-
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * * * *
11931371 TTTCAGAA-TTCGACAAAGAACCAGGAGAGATTA-TATTC-AAAG-ACCAA-AAGTTGT--TT--
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTA--AATAAGTTTTAATTCA
*** ** * * * * *
11931427 -A-A--AAAA----TTACAAACTAT-ATGGA-TCAAATGAAGC-AATGAAGCGA--TCTTGTGCA
62 AAGACCAAAAGTTGTTACAAA--ATGACAAACT-ATTTGGACCAAATGATGCGATTTCTCGAGCA
* * * * * *
11931479 TGGAATGTTCGGGAAATGTCTCGAAGTAAAGGATCATGTTGAATACTTTAA-GAACAGAAGTCAT
124 TGGAATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT
11931543 AAACA-AACTCGTAAAAGTTTGACAA-
189 AAA-AGAACTCGTAAAAGTTTGACAAG
* * ** * * * *
11931568 --T-----TTCATCCAAGAAGCATCAAAAATACAATTATCACGTAATTAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * * *
11931626 ACAAAAAGTAGTTTACAAAATGACATACTATTTGGACCAAATGAAGCAATTTCT-GTGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * * * * * *
11931690 TGTTCGATAAATGTCTCGAAAGAAAGGATTGTGTTAAATACTTTAAGGAACCGAAGTTATAAAAC
129 TGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
11931755 AACTCGTAAAAGTTTGAC---
194 AACTCGTAAAAGTTTGACAAG
* * *
11931773 -----AAGTTCATCCTAGAACCAAGAGAGATACAATTTCTCACATAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAA-TTCTCACGTAAATAAG-TTTTAATTCAAA
* * * * *
11931833 CACCAAAAGTAGTTTATAAAATGACAAACTATTTGAACCAAATGATGTGATTTCTCGAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * *
11931898 ATGTTCGAGAAATAG-CTTGAAGGAATGGATCATCTTGAATACTTTAAGGAACTGAAGTTATAAA
128 ATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11931962 AGAACTCTTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
** * * * * * *
11931985 TTCCAAAGTTGGACGAAGGACAAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * *
11932050 ACC-AAAGCTGGTTAC-AAATGACAACCTATTTGGA-CAAGTGATGCGATTTCTTGAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * *
11932112 TGCTCGAAAAAT-TGCACGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGATGTTATAAAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
* *
11932176 GAACTCATAAAAGTTTGACCA-
193 GAACTCGTAAAAGTTTGACAAG
* * * * *
11932197 TTTCGAAAGTTTGTCAAAGAACCAGGAGAGATTA-TACTCTCACGTAAATAAGTTTTTAATTCAA
1 TTT-GAAAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAG-TTTTAATTCAA
* * * * * *
11932261 AGACAAAAAGTAGTTTACAAAATGACATACTATTTGGACCAAATGAAGCGATTTC-CTGTGCAAG
63 AGACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATG
* * * * *
11932325 GAATGTTCAGGAAATGTCTCGAAGGAAAGGATCATGTTGAATAC-TTAAGGAACAGAAGTTATAA
126 GAATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
* *
11932389 AAGAACTTGTAAAAGATTGAC---
191 AAGAACTCGTAAAAGTTTGACAAG
* * * *
11932410 -----AAGTTCATCCAAGAACC-A-TGAGATACAAGTC-CACGTAAATAAGTTTTTAATTTAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
** ** * *
11932467 ACTGAAAGTTGTTTACAAAATGACAAACTATACGGACCAAATGA-ACTGATTTC-CTGTGCATGG
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGC-GATTTCTC-GAGCATGG
* * * * *
11932530 AATGTTCTGGAAATGTCTCGAAGGAAAGGATCGTGTTGAATACTTTAAGGAACAGAAGTTCTAAA
127 AATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AA
*
11932595 AAGAATTCGTAAAAGTTTGAC---
191 AAGAACTCGTAAAAGTTTGACAAG
* * * * *
11932616 -----AAGTTCGTCTAAGACCCATGAGAGATACAATAAC-CACGTAAATAAGTTTTTAATTTAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAAT-TCTCACGTAAATAAG-TTTTAATTCAAA
* * *
11932675 GACCAAAAGTTGTTTACAAAATGACAAAACTATTAGGACCAAATGAAGCAATTTCTCGAGCATGG
64 GACCAAAAGTTG-TTACAAAATGAC-AAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* * * * *
11932740 AATGTTCAGAAAATAG-CTCGAAGGAAAGGAAT-GTCTTCAATACTTTAAGGAACCGGAGTTATA
127 AATGTTCGGGAAAT-GTCTCGAAGGAATGG-ATCGTCTTGAATACTTTAAGGAACCGAAGTTATA
** ** *
11932803 AAAGAACTCACAAGTGTTTGAAAAAG
190 AAAGAACTCGTAAAAGTTTG-ACAAG
** ** * *
11932829 TTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCTTGTAAATATGTTTTTAACTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * * * *
11932894 ACCAAAAGCTAGTTAC-AAATTACAACCTATTTGGACAAAATGGTGCTATTTCTCAAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* *** * *
11932958 TGGTCAAAAAAT-TGCTCGATGGAATGGATCATCTTGAATACTTTAAGGAACCGAAGTTATAAAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11933022 GAACTCGTAAAAG-TTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * * * *
11933043 TTTGGAAGTTTGTCAAAGAACTATGAGAGATA-ATATTCTCACATAAATAAGTTTTGATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACA-ATTCTCACGTAAATAAGTTTTAATTCAAAG
* * * * * *
11933107 ACCAAAAGATGTTTACAAAATGACATTACAATTTAGACCAAATGATGCGACTTCCCGAGCATGGA
65 ACCAAAAGTTG-TTACAAAATGACA-AACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * *
11933172 ATGTTCGGGAAATGTCTCGAAGGAAAGGATTGTCGTGAATACTTTAAGGAACCGAAGTTATAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11933237 GAAGTCGTAAAAGTTTGAC---
193 GAACTCGTAAAAGTTTGACAAG
* * *
11933256 -----AAGTTCGTCCTAA-AACGAAGAGAGATACAATTCTCTCCT-AATAAGTTTTTTAATTCAA
1 TTTGAAAGTTCGTCC-AAGAACCAAGAGAGATACAATTCTCACGTAAATAAG--TTTTAATTCAA
* * * *
11933314 AGACCAAAAGTAGTTACAAAATGACAAACTATTTGGACTAAATGATTCAATTTCTCGAGCATGGA
63 AGACCAAAAGTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * **
11933379 ATGTTCGAGAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTAAAGTTATAAA
128 ATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* * *
11933443 ATAACTCTTAAAACTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
** * * * *
11933466 TTCCAAAGTTCGACCAATAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTTAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * * *
11933531 ACCAAAAGCTGGTAC-AAATGACAACCTATTTGGACCAAGTGATGCAATTTCACGAGCATGGAAT
65 ACCAAAAGTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAAT
* *** * *
11933595 GCTCAAAAAAT-TGCTCGTAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAG
130 GTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11933659 AACTCGTAAAAGTTTGACCA-
194 AACTCGTAAAAGTTTGACAAG
* *** * * *
11933679 TTTCGGAAG-TCGAAAAAGAACCAGGAGAGACTA-TATTCTCACATAAATAAGTTTTTAATTCAA
1 TTT-GAAAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAG-TTTTAATTCAA
* *
11933742 AGACCAAAAGTTGTTTACAAAATGACAAACTA-TTGGACTAAATGATTCGATTTCTCGAGCATGG
63 AGACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* * * * *
11933806 ATTGTTCGAGAAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGGACTGAAGTTATA
127 AATGTTCG-GGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATA
*
11933870 AAAGAACTCTTAAAAGTTTGACAAG
190 AAAGAACTCGTAAAAGTTTGACAAG
* ** * *
11933895 TTTCAAAGTTCAACCAAAAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * ** * *
11933960 ACCAAAACCTGGTTAC-AAATGACAACCTGCTCGGACCAAGTGATGCGATTTCTCGAGCATGGAA
65 ACCAAAA-GTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** *
11934024 TGCTCGAAAAAT-TGCTCGAA-GATACGGATCGTCTTGAATACTTTAAGGAA-CGAAGTTATAAA
129 TGTTCGGGAAATGT-CTCGAAGGA-ATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11934086 AGAACTCGTAAAATTTTGACCA-
192 AGAACTCGTAAAAGTTTGACAAG
* * * *
11934108 TTTTAGAAGTTCGTCAAAGAACCAGGAGAGATTA-TATTCTCACGTAAATAAAGTTTTTAATTCA
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAAT-AAG-TTTTAATTCA
* *
11934172 AAGACCAAAAGTTGTTTACAAAATGACAAACAATTTGGACCCAAATGATGCGACTTC-CGAGCAT
62 AAGACCAAAAGTTG-TTACAAAATGACAAACTATTTGGA-CCAAATGATGCGATTTCTCGAGCAT
* * * * * *
11934236 GGAATGTTTGAGAAATGTCTCGAAAGAAAGGATCGTGTTGAATACTTTAAGGAACCAAAGTTAAT
125 GGAATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTT-AT
11934301 AAAAGAACTCGTAAAAGTTTGAC---
189 AAAAGAACTCGTAAAAGTTTGACAAG
* * * * ** *
11934324 -----AAGTTCGTCCTAGAACCAAAAGAGATATAATTATCATATATATAAAGTCTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT-AAGT-TTTAATTCAAA
* * *
11934384 GACCAAAAGTAGTTTACAAAATGACAAATTATTTGGACCAAATGATACGATTTCTCGA-CTATGG
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGC-ATGG
* * * * * *
11934448 ATTATTCGAGAAATAG-CTTGAAGGAATGGATCATCTTGAATACTTTAAGGATTTGATACGAAAC
127 AATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGA----A-CCG-AA-
** * * * *
11934512 GAAAGTGGAAGAGGA-TCAT-AAAG-TTGTCAAG
184 GTTA-T--AAAAGAACTCGTAAAAGTTTGACAAG
* * ** * * * * * ** * * * ****
11934543 TCGTGGATCTAC--CCTAA-AGCTCTAGACAAATGTAA-TCTGAAACGAAAACAAAGAAAGACAG
1 T-TTGAAAGTTCGTCC-AAGAAC-CAAGAGAGATACAATTCT--CACGTAAA-TAAG--TTTTA-
* ** * * * ** * * **
11934604 ATT-AATTGA-CAAGAAGAATAATT-CATAACG--AAATTAAAATGAAACAAA-GATGAAATGGT
57 ATTCAA-AGACCAA-AAG--TTGTTACAAAATGACAAACT-ATTTGGACCAAATGATGCGAT--T
* * * * * * * * *
11934663 TGGTAACGGATCCAATAGAGAATGAAATTAGGG---T-TCT-GGATGAAAGAACCGTCATTG--G
115 T-CT--C-GA-GC-AT-G-GAATG---TTCGGGAAATGTCTCGAAGGAATGGATCGTC-TTGAAT
* * ** * * * * ** *
11934721 ACCTCAGAAAACATCCCAACCAGATCTGGAAAATAAAAACACACAAACAGATTTGTTAGAAGTG
168 ACTTTA-AGGA-A--CCGA--AG-T-T--ATAA-AAGAACTCGTAAA-AG-TTTG--ACAA--G
* ** * ** ** * * * *
11934785 ATTTAAAAGATAAAAG-CAAACTGTTTAGGCAAGA-ATGATTGAA-ACGGCAAGAAAAT-A--TT
1 -TTTGAAAG-T--TCGTCCAA--G---AACCAAGAGA-GATACAATTC-TCACGTAAATAAGTTT
** * ****** * * * ** * * * *
11934844 GGATCTCCTAATTTTTGATGTTTCTTGATCGATCAGGGTAGGAGAACGTCCCTCTTGAAGCAAAT
55 TAAT-T-CAAAGACCAAAAG-TTGTT-A-C-A-AAATG-A-CA-AAC-T--AT-TTGGACCAAAT
** * * *** ** * * ** ** * * * *
11934909 --T-C-AACT-TAGAACGAAAACAACTAAATCAGTAACCGTAAACAGAAAGAAAT-AAAC-TATA
106 GATGCGATTTCTCG-A-GCATGGAA-T-GTTCGGGAAATGT-CTC-G-AAGGAATGGATCGTCT-
* * * * * *** *
11934967 T-CA-AC-TT-A-GAA-CGATG-GATTAAAG-A-TAG-AAAAGAGAAGAATAACG
163 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TTTG-ACAA-G
* *** * * * * * * * * *
11935012 TCT-AAGAG--C--CTTGGAAACAATATAGAATCCACAA--CTCCCTTCAAT-GGCTCTAATTTC
1 TTTGAA-AGTTCGTCCAAGAACCAAGAGAG-AT--ACAATTCTCACGTAAATAAGTTTTAA--T-
* * * * * ** *** * ***
11935069 CCCTCCAAGA--AAGAGATCTTGGCAAGAAAAAGCTTGAAGA-TGATTCCCA-CAACCTGA-AAA
59 ---TCAAAGACCAAAAGTTGTT-ACAA-AATGA-C---AA-ACT-ATTTGGACCAA-ATGATGCG
** * * **** * * * *** * **
11935129 ATTGT-TAAAACA---ACT-TCTAAAAAAAT-ACTC-AA-G-A-GCAATCTTGAAGAAAGACTCA
112 ATT-TCTCGAGCATGGAATGT-TCGGGAAATGTCTCGAAGGAATG-GATCGTCTTG-AATACTTT
*** * * * **
11935184 AAGAGAA-TTTA-TTATAACCAAAATAATC-AAAATCCAGTGTTTTTTCAAG
173 AAG-GAACCGAAGTTATAA--AAGA-ACTCGTAAA---A--G-TTTGACAAG
*** * ** * ** * * * * *
11935233 GGGGAACGACCATGCTACTATAGGCCTCCA-A-A-ATA-AGCTTTCCTAACCCT-AATAGAATTC
1 TTTGAAAGTTC--G-T-CCA-AGAAC-CAAGAGAGATACA--ATT-CTCA-CGTAAATA-AGTT-
* * * * *** * ** * *** *
11935293 TAACCATT-ACAG-CTAATCAAATAAAATAAAATAAAAACAAAATAAATTTAAGTGTGGATATGA
54 TTA--ATTCAAAGACCAA--AAGT-TGTTACAA-AATGACAAACT--ATTT--G-GACCAAATGA
* ** * *** * * * *
11935356 -G-GA-TT-TCG-GCCAAGGGCT-TT---G-AATGGGCTCCTTGG-CTGAATTCTTACATGATAA
108 TGCGATTTCTCGAG-CATGGAATGTTCGGGAAAT-GTCTCGAAGGAATGGA-TCGT-CTTG--AA
** * * *
11935410 TCCAC-TT-ATTAA---AA--TA-AAAATTGGAC-C-T-AAAG-TT-AAATAC
167 T--ACTTTAAGGAACCGAAGTTATAAAA--GAACTCGTAAAAGTTTGACA-AG
** * * * ** * *** * * ** * *
11935450 TTTCCAATTTGGGCCACTTTAA-TAATTTAG--CCTGATAT-TCAATTAAATTACTTTCTAAACT
1 TTTGAAAGTTCGTCCA--AGAACCAAGAGAGATAC-AAT-TCTCACGTAAATAAGTTT-T-AA-T
** * * * * ** * * ** * * *
11935511 TC-AAGA--TGAACTTG-TAGAATATTA-ATGGGCCTTTTTGCAAGAACTTGGTCTTGTGATCCG
59 TCAAAGACCAAAAGTTGTTACAAAATGACA---AACTATTTGGACCAA-AT-G--ATGCGAT---
** * * * **** * * ** * *
11935571 TT-T-GCTCTTGAAATTGACTCATTCAAGGTCGTAC-AAGAAATCCAAT-GTGCCTTG---GCTG
114 TTCTCGAGCATGGAA-TG-TTCGGGAAATGTC-T-CGAAGGAAT-GGATCGT--CTTGAATACTT
* * * *** * ** * * ** * *
11935629 CAA-GATTCGGTTTCTTTTTCAAGAA-TTG-AAATCTTGATTTTTCTTGAT
172 TAAGGA-ACCG-AAGTTATAAAAGAACTCGTAAA---AG-TTTGAC--AAG
* * * * * * * ** *
11935677 TCTTGAAATGTTTGAAACAACATAATTGGACCAAGATTCG-GTTTCTTGATTTTCTTGATCAAT-
1 T-TTGAAA-GTTCG--TC--C--AA--GAACCAAGA---GAGATAC--AATTCTCACG-TAAATA
**** * * * * * * * * * * *** * * *
11935740 -GTGCGCA-TCTAGGGCCTTGGTAACGTAGTCTTCGATA-GTCTTGTTCAATTTTG-CTTAAAT-
50 AGTTTTAATTCAAAGACC----AAAAGTTGT-TACAAAATGAC--AAACTATTTGGAC-CAAATG
* * * * * * * *
11935800 TTGCTTGGCTTT-T-GA-CCTCGTTATTAGTCTTGAGGAAGATTGAGCCCATCGCGTTCATACG-
107 ATGC---GATTTCTCGAGCAT-G-GAAT-GT-TCG-GGAA-A-T--G----TCTCG---A-AGGA
* * * * * * * * * *
11935861 CTGGATTTTGGGTCCTACGACT-CGTATCA-GAACTGAAGTTACAAAATAACTC-T-AAAGTTTA
152 ATGGA---T-CGT-CT-TGAATAC-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG
11935922 ACAAG
210 ACAAG
** * * * * *
11935927 TTCCAAAGTTCGACCAAGAACCAACAGACATACAATTCTCATGGAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * * *
11935992 ACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAGTGAAGTGATTTCTCTAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * * *
11936056 TGCTCGAAAAAT-TACTCGAAGAAATGGATCGTCTTGAATACTTTAAGGAAATCAAAGTTTATAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGG-AACCGAAG-TTATAA
* *
11936120 AAGAAATCGTAAAAGTTTGACCA-
191 AAGAACTCGTAAAAGTTTGACAAG
* * * * *
11936143 TTTCAGAAGTTCGTCAAAGAACCAGGAGAGAT--TATTCTCACATAAATAAGTTTTTAATTCAAA
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * * *
11936206 GACC-AAAGTTGTTTACAAAATGACAAACAATTTGGCCCAAATGATGTGACTTCTCGAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * ** * *
11936270 ATGTTCGAGAAATGTCTCGAAAGAAAAGATCGTGTGTGGAATACTTTAAGGAAACGAAGTTATAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCT-T-GAATACTTTAAGGAACCGAAGTTATAA
*
11936335 AA-AAGCTTGTAAAAGTTTGAC---
191 AAGAA-CTCGTAAAAGTTTGACAAG
** * *
11936356 -----AAGTTCGTCCTTGAA-CAAGAGAGATTA-ATTTCTCACATAAATAAGTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTAATTCAAAG
* *
11936414 ACAAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
*** *
11936479 TGTTCAAAAAATAG-CTTGAAGGAATGGATCGTGC-TGAATACTTTAAGGAACCGAAGTTATAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGT-CTTGAATACTTTAAGGAACCGAAGTTATAAA
11936542 AGAACTCGTAAAAGTTT---AA-
192 AGAACTCGTAAAAGTTTGACAAG
* * * *
11936561 ----CAA-TTCGTCCTAGAACCAAGAGGGATACAATTCTCACATAAATAAGCTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11936621 ACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTCGAGCATGGAT
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * *
11936686 TGTTCGAGAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGAAACTGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11936750 GAACTCTTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * *
11936772 TTTCAAAGTTCGACCAAGAACCAAGAGAGCTACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * **
11936837 ACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACC-AATGATAAGA--T-TCGAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * * *
11936897 TGCTCGAAAAAAT-TGCTCGAAGGAATGGATCATCTTGAATAC-TTAAGAAACCAAAGTTATAAA
129 TGTTCG-GGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AA
*
11936960 AAGAACTCGTAAAAATTTGACAAG
191 AAGAACTCGTAAAAGTTTGACAAG
* * * *
11936984 TTCT-AAAGTTCGTCCTAGAACCAGGAGAGATACAATTCACACGTAAATAAGTTTTTAATTCAAT
1 TT-TGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
*
11937048 GACCAAAAGTTGTTTACAAAATGACGAAA-TATTTGGACCAAATGATGCGA-CTC-CAGAGCATG
64 GACCAAAAGTTG-TTACAAAATGAC-AAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATG
* * * *
11937110 GAATGTTCGGGAAAT-TCTTCGAAAGAAAGAATCGTGTTGAATACTTTAA-GAACCGAAGTTATA
126 GAATGTTCGGGAAATGTC-TCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATA
*
11937173 AAATAACTCGTAAAAGTTTGAC---
190 AAAGAACTCGTAAAAGTTTGACAAG
* *
11937195 -----AAGTTCGTCCTAGAACCAAG-GAGATACACATTCTCACATAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACA-ATTCTCACGTAAATAAG-TTTTAATTCAAA
* * * *
11937254 GACCAAAAGTAGTTTATAAAATGATAAACTATTTGGACCAAATGATGCAATTTCTCGAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
*** * * * *
11937319 ATGTTCAAAAAATAG-CTTGACGGAATGGATCATCTTGAATACTTTAAGGAACTGAAG-TATAAA
128 ATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11937382 AAAACTTGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
** ** ** *
11937405 TTCCAAAGTTCAACCAAGAACCAAGAGAGATGA-AATTCTCATTTAAATAAGTTTTTTATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGAT-ACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * * *
11937469 GACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGGCCAAATGATACGATTTCTCGAGCATGGA
64 GACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* ** * * * *
11937533 ATGCTCGAAAAATTTCTTGAAGGAATGGATCATCTTGAATACTTTAAGGAACCGATGTTATAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
**
11937598 GAACTCGTAAAAAATTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * * * * *
11937620 TTCT-AAATTTCATCCTAGAACTAGGAGAGATACAATTCACACGTAAATAATTTTTTAATTCAAT
1 TT-TGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA-GTTTTAATTCAAA
*
11937684 GACCAAAAGTTGTTTACAAAATGATGAAA-TATTTGGACCAAATGATGCGATTTCTCGAGCATGG
64 GACCAAAAGTTG-TTACAAAATGA-CAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
** * * * * * *
11937748 AATGTTCATGAAAT-TGCTTTGTA-GAAAGGATCATCTTGAATACTATAACGAACCGAAGTTATA
127 AATGTTCGGGAAATGT-C-TCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATA
* *
11937811 AAAGAAATCGTAAAAGTTTAACAAG
190 AAAGAACTCGTAAAAGTTTGACAAG
* * ** *
11937836 TTTGAAAGTTCATCCAAGAACCAAGAGAGAAACAATTCTCAATTAAATAAGTTTTTAATTTAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * *
11937901 ACCAAAATTTATTTACAAAA-GACCAACTATTTGGACCAAATGATGCAATTTC-CTGAG-ATGGA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGA
* ** * *** * * **
11937963 ATGCTCGAAAAACT-CCTCGAAGGAATGGATAAACATGAATACTTCAAGGAATTGAAGTTATAAA
128 ATGTTCGGGAAA-TGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AA
*
11938027 AAGAACTTGTAAAAGTTTGAC---
191 AAGAACTCGTAAAAGTTTGACAAG
* * ** *
11938048 -----AAGTTCATCCAAGAAACAAGAGAGATACAATTCTCATTTAAATAAGTTTTTAATTCGAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * **
11938108 ACCAAAAGCTTTTTAC-AAATGACAAACTATTTGTACCAAATGATGCCATTTCTTAAGCATGGAA
65 ACCAAAAG-TTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * * *
11938172 TGCTT-GAAAAATAG-CTCGATGGAATGGATCATCTTGAATA-TTTAAGGAACTGAAGTTATAAA
129 TG-TTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11938234 AGAACTCGTTAAAAGTTCGACAAG
192 AGAACTCG-TAAAAGTTTGACAAG
* * *** * *
11938258 TTCGAAAGTTCATCCAAGAACTGGGAGAGATACAGTTCTCACGTAAATAAGTTTTTAAATCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11938323 ACCAAAAGTTGCATACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTTTCGACCATGGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGA-TTTCTCGAGCATGGA
* * * * * *
11938388 ATGTTCGAGAAATGTCTCGAAAGAAAGGATCGTCTTAAATACTTTAAGGAACTGAAGTTATAAAC
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11938453 GAACTCGTAAAAGTTTGAC---
193 GAACTCGTAAAAGTTTGACAAG
* *
11938472 -----AAGTTCATCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTATTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGT-TTTAATTCAAAG
*
11938532 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACAAAATGATGCGATTTCTCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
*** * * ** *
11938597 TGTTCAAAAAATAG-CTCAAAAGAATGGATCGTCTTGAATACTTTAAGGAACTAAATTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11938661 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * *
11938683 TTCGAAAGTTCGTCCAAGAAGCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11938748 ACCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAGATGATGTGACTTCTCGAGCATGG-A
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* *** * * * * ** *
11938811 TTTCTCAAAAAATAG-CTAGAATGATTGGATTGTCTTGAATACTTTAAGGAACTAAAGTTATAGA
129 TGT-TCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
11938875 AGAACTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* ** * * *
11938898 TTCGAAAGTTTATCCAAGAACCGAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11938963 ACC-AAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTTGAGAATGGAA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * *
11939026 TGCTCGGAAAATAG-CTCTAAGGAATCGATCATCTTGAAATACTTTAAGGAACCAAAGTTATAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTG-AATACTTTAAGGAACCGAAGTTATAAA
* *
11939090 AGAACTCGTTAAAGTTTAACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * * *
11939113 TTTGAATGTTCGTCCAAGGAGCAGGAGAGATACAATTCTCTCGTAAATAAGTTTTTAACTCCAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
*
11939178 ACCAAAAGTTGTTTACAAAATGATAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * *
11939243 TGTTCGGGAAATGCCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAG
129 TGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
* *
11939308 AACTCATATAAGTTTGAC---
194 AACTCGTAAAAGTTTGACAAG
11939326 -----AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * *
11939386 ACCAAAACTTGTTTACAAAATAACAAACTATTTGGACCAAATAATGCGATTTCCCAAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * *
11939451 TGTTCGAGAAAT-TGCTCAAAGGAAAGGATTGTCTTGAATACTTTCAGGAACTGAAGTTATAAAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11939515 GAACT--T----G-TT-A-AAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * *
11939528 TTTGACAAGTTCGTGCAAGAACCAGGAGAGATACAATTCTCATGCAAATAAGTTTTAAATTGAAA
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT-AATTCAAA
* * * * *
11939593 GACCAAAATTTGTTTAC--AA-GACAAAATATTTGGATCAAATTATGCGATTT-TCGAGCTTGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * ** ** *
11939654 ATGTTCGTGAAAT-TACTCGAAGGAAAGGATCATCTAAAATACTTTAAGGAACTAAAGTTAGAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11939718 AGAACTCGTAAAACTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * *
11939741 -TTCAGAAGTTCGTCCACGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTATTCGAAG
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAG
* * * * * *
11939805 ACCAAAAAATTATTATAAAATGACAAACTATTTGAACCAAATGATGCAATTTCTTGAGCATGGAA
65 ACC-AAAAGTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * * *
11939870 TGTTCGGGAAATGTCTCGATGGAAAGGGTAGACTTGAATACTTTTAGGAATCGAAGTTATAAAAG
129 TGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11939935 AACTCATAAAAGTTT-A-AA-
194 AACTCGTAAAAGTTTGACAAG
* * * * *
11939953 ATT-----TTCGACCAGGAACCAAGAGAGATACTATTCTCACATAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
** * * *
11940013 ACCAAATTTTGATTTC---ATGACAAACTATTTGGACCAAATAATGCGATTTCTTGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * *
11940075 TGTTCATGAAAT-TGCTCAAAGG-ATGGGATCGTCTTGAATACTTTAAGGAACCGATGTTATAAA
129 TGTTCGGGAAATGT-CTCGAAGGAAT-GGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11940138 AGAACTTGTAAAAGTTTGAC-AG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * ** *
11940160 TTCTG-AAGTTCATCCAAGAACCAAAAGAGAAACAATTCTTAATTAAATAAGTTTTTAATTGAAA
1 TT-TGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * * * * * *
11940224 GACCAAAAGTTGTTTAC-AAATGAAAAACTATTTGGACCAGATAATGCAATATCCCGAGCTTGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
*** * * * * *
11940288 ATG--CTAAAAAT-TCCTTGAAGGAATGGATCATCATAAATACTTTAAGGAATCGAAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11940350 ATAACTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11940373 TTCGAAAGTTCGTCCAAAAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* *
11940438 ATCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGC-AATTCTCGAGCATGGAA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* *** * * * * * *
11940501 TGCTCCAAAAATAG-ATCAAAGGAATGG---GTCTTAAATACTTTAAGGAACTGGAGTTGTAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11940562 GAACTCGTAAAAG-TTGACATG
193 GAACTCGTAAAAGTTTGACAAG
* * ** *
11940583 TTCTG-AAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTTAATTAAATAAGTTTTAATTTAAAG
1 TT-TGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAG
* * * *
11940647 ACCAAAAGTTGTTTAC-AAATGACAAACTATTTGGACCAGATAATGTGATTTCCCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * * * *
11940711 TGCTCGAAAAAT-TCCTTGAAGGAATGGATCATCATAAATACTTTAAGGAACCGAAGTTATAAAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11940775 TAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * * * *
11940797 -TTGGAAGTTCGTCTAAAAACCAAGAGAGATACAGTTCTCATGTAAATAAGTTTTTAATTCAAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
11940861 ACCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
65 ACCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * *
11940925 TGCTCCGAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAA
129 TGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11940989 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
* * * *
11941011 TTCGAAAGTTCATCCAAGAACCAAGAGAGTTACAATTCTCATGTAAAATAAGTATTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT-AAATAAGT-TTTAATTCAAA
*
11941076 GACCAAATGTTGTTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * ** * *
11941140 ATGCTAGAAAAATAGGT-T-GAAGAAATGGATCGTCTTGAATACTTTATGGAACCGAAGTTATAA
128 ATGTTCGGGAAAT--GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
11941203 AAGAACTCGTAAAAGTTTGACAAG
191 AAGAACTCGTAAAAGTTTGACAAG
* * * * *
11941227 ATT-AGAAGTTCATCCAAGAA-CTAGAAGAGATATAATTCTCACGTAAATAAGTTTTAATTGAAA
1 TTTGA-AAGTTCGTCCAAGAACCAAG-AGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAA
* *
11941290 GACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGTATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * ** * **
11941355 ATGTTTGGGAATTGTCTCGAAGGAAACGATCGTCTTGAATACATTAAGGAATTGAAGTTATAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
*
11941420 GAACTC-----A---TAACAA-
193 GAACTCGTAAAAGTTTGACAAG
* * * *
11941433 TTTTACAAGTTCATCCAAGAAACAAGAGAGATACAATTCTCACATAAATAAGTTTTAAATTCAAA
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT-AATTCAAA
* *
11941498 GACCAAAAGTTATTCACAAAATGACAAA-TCATTTGGACCAAATGATGCGATTTCTTGAGCATGG
64 GACCAAAAGTTGTT-ACAAAATGACAAACT-ATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* * * * **
11941562 AATGTTTGGAAAATAG-CTCGAATGAATGGATTGTCTTGAATACTTTAAGGAATTGAAGTTATAA
127 AATGTTCGGGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
*
11941626 CAGAACTCGTAAAAGTTTGACAAG
191 AAGAACTCGTAAAAGTTTGACAAG
* * * ** **
11941650 TTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCAATTAAATAAGTTTTTAATTTGAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * *
11941715 ACCAAAAGTTGTTTAC-AAATGACAAACTACTTGGACCAGATGATGCGATTTCCCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* ** * * *
11941779 TGCTCGAAAAAT-TCCTCGAAGGAATGGATCATCATGAATACTTTAAGACGAA-CGAAGATATAA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAG--GAACCGAAGTTATAA
*
11941842 AATAACTCGTAAAAG-TT--C--G
191 AAGAACTCGTAAAAGTTTGACAAG
* ** * * * * * * *
11941861 GTT----GTTCGTCCAAGAATGAAAAGAGAAATAATTTTGACGTAACTAAGATTTTAATTCCAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
** *
11941922 ATGAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAATTGATGCGATTTCTCGAGCATGGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * ** * * *
11941987 TGATC-GAAAATAACTCGAAGGCATGGATCGTCTTGAATACTTTAAGAAAACGAAGTTATAAAAG
129 TGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11942051 AACTTGTAAAAGTTTGACAAG
194 AACTCGTAAAAGTTTGACAAG
** * * * * *
11942072 TTCAAAAGTTCATCCAAGAACCAAAAGAGAGACAATTATGACGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * * *
11942137 ATCGAAAGTTGTTTACAAAATTACAAACTATATTGGACCAAATGGTGTGATTTCCCGAGCATGGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTAT-TTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * * * *
11942202 ATGTTCAGAAAAT-TGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGCAACCAAATTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
11942266 AGAACTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11942289 TTTGAAAGTTCGTCCAAGAACCAGGAGAGACACAATTCTCACGTAAATAAGTTTTAATTCAATGA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAGA
* * * * *
11942354 CCAAAAGTTATTTACCAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGA-TATTTGAA
66 CCAAAAGTT-GTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCA-TGGAA
* * * *
11942418 TGTTTGGAAAATGTCTCGAAGGAAAGGATCGTGTTGAATACTTTAAGGAACCGAAGTTATAAAAG
129 TGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
11942483 AACTCGTAAAAGTTTGAC---
194 AACTCGTAAAAGTTTGACAAG
*
11942501 -----AAGTTCGTCCAAGAA-CAATGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAA
* * * * * *
11942560 GACCAAAAGCTGTTTACAAAATGACAAACTATTTGGACCAAATAATGTGAATTCCCGAGCATGCA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* ** *
11942625 ATCTTTAGGAAAT-TGCTCGAAGGAAAGG-TCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11942688 TGAACTCGTAAAAGTTTGGCAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * *
11942711 TTTGGAAGTTCGTCCAAGAACCAAGAGAGATACGATTCTCACGTAAATAAGGTTTTAATTCGAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA-GTTTTAATTCAAAG
* * *
11942776 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGTGATTTCCCGAGCATCGAA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
* * * * * * *
11942841 TGCTCGTGCAAT-TGCTTGAAGAAAAGGATCGTCTTGAATATTATTTATA-GAACCGAAGTTATA
129 TGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATA--CTTTA-AGGAACCGAAGTTATA
*
11942904 AAAGAACTCGTAAAAGTTTGACATG
190 AAAGAACTCGTAAAAGTTTGACAAG
* * * * *
11942929 TTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTTA-GTTAAATAAGTTTTTAATTTAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACG-TAAATAAG-TTTTAATTCAAA
* * *
11942993 GACCAAAAGTTGTTTAC-AAATGACAATCTATTTGGACCAGATGATGCGATTTCCCGAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* *** * * * *
11943057 ATGCTCAAAAAAT-TCCTAGAAGGAATGGATCATCATGAATACTTTAAGGAACCGAAGATATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11943121 ATAACTCGTAAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * *
11943144 TTTGGATGTTTGTCCAAGAACCAA-AGAGAAACAATTTTGACGTAAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT-AAATAAG-TTTTAATTCAAA
* *
11943208 GACGAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCAAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* ** *
11943273 ATGTTCGGAAAATAACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAACGAAGTTATAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11943338 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * * * * *
11943360 TTCAAAAGTTCGTCCAAGAACCAAAAGAGAGACAATTATGATGTAAATAAGTTTTAAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT-AATTCAAAG
* * * *
11943425 ATCAAAAGTTGTTTACAAAATGACAAACTATTTTGGACCAAATGGTGTGATTTCCCGAGCATGGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTTCTCGAGCATGGA
** * * *
11943490 ATGTTCGAAAAAT-TGCTCGAAGGAATGGATCATCTTGAATACTTTAAGGAATCGAATTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11943554 AGAACTCGTAACAGTTTAACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * * *
11943577 TTCGGAAGTTCATCGAAGAACAAAGAGAGAAACAATTCTCACATAAATAAGTTTTAAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT-AATTCAAAG
* * * * *
11943642 ACCAAAAGTTGTTTAAAAAATGACAAACTATTTTGGAACAAATGATGCGATTTCCCGATCATTGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * * * *
11943707 ACGTTCAGAAAATGTCTC-AGAGGAGTGGATCATCTTGAATACTTTAAGGAACCGAATTTATAAA
128 ATGTTCGGGAAATGTCTCGA-AGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11943771 AGAACTCGTATAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * * *
11943794 TTCGGAAGTTCGTCCAAAAACCAAAAGAGAAACAATTTTGACGTAAAATAAGTTTTTAATTCAAA
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT-AAATAAG-TTTTAATTCAAA
* *
11943859 GACGAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCAAGCATGGA
64 GACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* ** *
11943924 ATGTTCGGAAAATAACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAACGAAGTTATAAAA
128 ATGTTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA
11943989 GAACTCGTAAAAGTTTGACAAG
193 GAACTCGTAAAAGTTTGACAAG
** * * * * *
11944011 TTCAAAAGTTCGTCCAAGAACCAAAAGAGAGACAATTATGATGTAAATAAGTTTTAAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT-AATTCAAAG
* * * *
11944076 ATCAAAAGTTGTTTACAAAATGACAAACTATTTTGGACCAAATGGTGTGATTTCCCGAGCATGGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTTCTCGAGCATGGA
** * * *
11944141 ATGTTCGAAAAAT-TGCTCGAAGGAATGGATCATCTTGAATACTTTAAGGAATCGAATTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11944205 AGAACTCGTAACAGTTTAACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * * *
11944228 TTCGGAAGTTCATCGAAGAACAAAGAGAGAAACAATTCTCACATAAATAAGTTTTAAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT-AATTCAAAG
* * * * *
11944293 ACCAAAAGTTGTTTAAAAAATGACAAACTATTTTGGAACAAATGATGCGATTTCCCGATCATTGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTTCTCGAGCATGGA
* * * * * *
11944358 ACGTTCAGAAAATGTCTC-AGAGGAGTGGATCATCTTGAATACTTTAAGGAACCGAATTTATAAA
128 ATGTTCGGGAAATGTCTCGA-AGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
*
11944422 AGAACTCGTATAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * * *
11944445 TTCGGAAGTTCGTCCAAAAACCAAAAGAGAAACAATTTTGACGTAAATAAGTTTTTAATTCAAAG
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
*
11944510 ACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACC-AATAGATGCGATTTC-CTGATCATGG
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAAT-GATGCGATTTCTC-GAGCATGG
* * * * *
11944573 AATGTTTGGGAAAT-TGCTCGAAGGAAAGGATCATCTTTAATACTTTAAGGAACCAAAGTTATAA
127 AATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAA
*
11944637 AAGAACTCGTAAAAATTTGACAAG
191 AAGAACTCGTAAAAGTTTGACAAG
* * * * * * * * *
11944661 TTCGGAAGCTCGTCTAAGAACCATGAGAGAAAGAATTCTCACTTAAATAAGTTTTTAATTTAAA-
1 TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAG-TTTTAATTCAAAG
* * * * *
11944725 ACCAATAGTTGTTTAC-AAATGACAAATTTTTTGGACCAAGTGATGCTG-TTTCCCGAGCATGGA
65 ACCAAAAGTTG-TTACAAAATGACAAACTATTTGGACCAAATGATGC-GATTTCTCGAGCATGGA
** * * * *
11944788 ATGTTCGAAAAAT-TGCTCGAAGGAATGGATCGTCATGAATACTTGAAAGAACCAAAGTTATAAA
128 ATGTTCGGGAAATGT-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* *
11944852 AGAACTCATGAAAGTTTGACAAG
192 AGAACTCGTAAAAGTTTGACAAG
* * * * * *
11944875 -TTCAGAAGTTCGTCCAAGAACCAAAAGATAAACAATTTTGACGTAAATAAGTTTTAATTCAAAG
1 TTTGA-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAG
* *
11944939 ACCAAATG-T-TTACAAAATGACAAACTATTTTGGAACAAATTGATG
65 ACCAAAAGTTGTTACAAAATGACAAACTA-TTTGGACCAAA-TGATG
11944984 TGAGCTCGTC
Statistics
Matches: 25471, Mismatches: 5283, Indels: 5083
0.71 0.15 0.14
Matches are distributed among these distances:
185 8 0.00
186 28 0.00
187 78 0.00
188 15 0.00
189 4 0.00
190 18 0.00
191 6 0.00
192 5 0.00
194 6 0.00
195 158 0.01
196 80 0.00
197 110 0.00
198 20 0.00
199 248 0.01
200 65 0.00
201 45 0.00
202 48 0.00
203 257 0.01
204 491 0.02
205 402 0.02
206 826 0.03
207 2269 0.09
208 2039 0.08
209 756 0.03
210 463 0.02
211 576 0.02
212 1000 0.04
213 1367 0.05
214 2530 0.10
215 4002 0.16
216 2948 0.12
217 1842 0.07
218 566 0.02
219 137 0.01
220 93 0.00
221 81 0.00
222 58 0.00
223 87 0.00
224 76 0.00
225 110 0.00
226 98 0.00
227 127 0.00
228 103 0.00
229 120 0.00
230 100 0.00
231 70 0.00
232 80 0.00
233 80 0.00
234 81 0.00
235 74 0.00
236 44 0.00
237 22 0.00
238 30 0.00
239 37 0.00
240 37 0.00
241 27 0.00
242 29 0.00
243 35 0.00
244 30 0.00
245 44 0.00
246 32 0.00
247 21 0.00
248 15 0.00
249 34 0.00
250 20 0.00
251 13 0.00
252 10 0.00
253 8 0.00
254 7 0.00
255 5 0.00
256 21 0.00
257 13 0.00
258 17 0.00
259 7 0.00
260 12 0.00
261 12 0.00
262 3 0.00
263 10 0.00
264 8 0.00
265 6 0.00
266 6 0.00
267 2 0.00
268 3 0.00
ACGTcount: A:0.39, C:0.15, G:0.18, T:0.28
Consensus pattern (214 bp):
TTTGAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTAATTCAAAGA
CCAAAAGTTGTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG
TTCGGGAAATGTCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
CTCGTAAAAGTTTGACAAG
Found at i:11915684 original size:423 final size:423
Alignment explanation
Indices: 11911480--11944983 Score: 15164
Period size: 423 Copynumber: 78.3 Consensus size: 423
11911470 AAAATTTGAC
* * *
11911480 AAGTTTGTCCAAGAATC-GTGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * ** *
11911544 AAAGTTGTTTAC-AAATGACAAACTATTTGGACCAAATAATGTGATTTCTATAGCATGGAATGAT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * *
11911608 CGGGAAAT-TGCTTGAAGGAAAGGATCGTCTTGAATGCTTTAAGGAACCGAAGTTATAAAAGAAC
130 CGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
*
11911672 TCGTAAAATTTAACAAGTTTG-GAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
194 TCG-------TAA-AAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
** * *
11911736 TAAGGATTTAATTCGAAGACCAACAGTTGTTTAC-AAATGACAAACTATTTGGACCAAATGATGC
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * * * * *
11911800 AATTTC-CGAGGATGGAACGTTCGGTAAAT-GTCTCGAAGGAAAGGATCGTCTTGAATACTTTTC
316 GATTTCTCGAGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGTCTTGAATAC-TTTA
*
11911863 A-GAACCGAAGTCATAAAAGAACTCGTAAAAGTTTGACAAG-T-T-
378 AGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
** * * *
11911905 --G---GTCTTAGAACCA-AGAGAGATACAATGCTCACATAAATAAG-TTTTAAATCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
** * * * * *
11911963 AAAGTACTTTACAAAATGACAGACTATTTGGACCAAATGATGCGATTTCTCAAGCACGGAGTGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * * ** * *
11912028 CGAAAAATAGCTTGAAGGAATA-GATCATCTTGAATACTTTATGGTATTGAAGTTAAAAAAGAAA
130 CGGAAAATATCTCGAAGGAA-AGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
*
11912092 TCGTAAAAGTTTGACAAGTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAAT
194 TCGTAAAAGTTTG---A---C-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT
* * * * * **
11912157 ACG-TTTTAATCCAAACACCAAAAGCTGGTTT--AAAATGATAGCCTATTTGGA-CAAATGATGC
252 AAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * * * * *
11912218 GATTTCTCGAGTATGGAATGCTCAAAAAATTGCTCGAAGGAATGGATAGTCTTGAATAATTTAAG
316 GATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
* **
11912283 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAGAAGTTCGG
380 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11912327 AATTTCGTCAAAGAACCAG-GAGAG----A---T---GTAAATAAGTTTTTAATTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAGAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
*** * * * * *
11912381 AAGTTGTTTAGGGAATGACAAACAATTTGGACCAAATGATGCAAATTCTCGAGCATGGATTATTC
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
* * * * * *
11912446 AG-AAATGTCTCAAAGGAAAGGATCATCTTGAATACTTTAAGGAACTGAAGTTAAAAAAGAACTC
131 GGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
* * * * *
11912510 GTAAAAATTTGACAAGTTCGTCCTAGAACCATGAGAGATACAATTATCACATAAATAAGTTTTTA
196 GTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTA
* * * *
11912575 ATTGAAAGACCAAAAGTAGTTTACAAAATGACAAATTATTTGGACC-AATGATGCGATTTCTAGA
261 ATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA
** * * *
11912639 GCATGGAATGTTCGAAAAATAGCTTAAAGGAATGGATCGTTTTGAATATTTTAAGGAA-CTACAG
326 GCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGA-AG
* * *
11912703 TTATAAAAGAACTCGTAAAAGTCTAACAAAGTTCCA
389 TTATAAAAGAACTCGTAAAAGTTTGAC-AAGTTCTA
* *
11912739 AAGTTCGTCGAAGAACC--A-AGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * **
11912801 AAAGCTTG-TTAC-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTTGAGCCTGGAATCC
65 AAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * *
11912864 TCTGAAAAT-TGGTAGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAA
129 TCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* *
11912928 CTCGTAAAAGTTTGATAAGTTCGAAGTTCATCCAAG-ACCAGGAGAGATACAATTCTCACGTAAA
193 CTCGTAAAAGTTTG---A---C-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
* * *
11912992 TAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGAC-AACTATTTGGACCAAATAATGT
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * * * * * *
11913056 GA-TTCCCAGAGAATGGAATGTTCGGGAAATTGCTCAAAGGAAAGGATCGTCTTGAACACTTTAA
316 GATTTCTC-GAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAA
* * * *
11913120 GG-ATCGAAGTTATAAAAGAACTTGTAAAA-ATTGACAAGTT-TGG
379 GGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
* ** *
11913163 AAGTTCGTCCAAGAACCA-AGAGAGATACATTCTCACGTAAATAAGGATTCAATTCAAAGACCAA
1 AAGTTCGTCCAAGAACCAGAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
* * *
11913227 AAGTTGTTTACAAAATGACAAGCTA-TT-GACCAATTGATGCGATTTCCCGAGCATGGAATGTTC
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
* * * * * * *
11913290 GGGAAATGT-TCAAAGGAAAGGATCGTCGTGAACACTTTAAGGAACCGAAGGTAAAAAAGAACTC
131 GGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
* * **
11913354 GTAAAAGTTTGACAAGTTCGTCCTAGAACCAAAAGAGATACAATTCTCACAAAAATAAGTTTTTA
196 GTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTA
* *
11913419 ATTCAAAGACC-AAAGTAG-TTACAAAATGACAAACT-TTTAGACCAAATGATGCGATTTCTCGA
261 ATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA
* * * * * *
11913481 GCATGGAATGTTTGAAAAATAGCTTGAAGG-ATCGATCGTCTTGAATGCTTTAAGAAACTGAAGT
326 GCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGT
* * *
11913545 TA-AAAAGAACTCTTAAAAGTCTGACAAGTTCAA
390 TATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11913578 AAGTTCGTCCAAGAACCA-AGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAGACTA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGAC-C
* * * *
11913642 AAAAGTAGTTTGCAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTCTAGCATGGAATGT
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * *
11913707 TCGAAAAATAGCTTGAAGGAACGGATCATCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAAC
129 TCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * *** *
11913772 TTGTAAAAGTTTGACAAGTTCGAAAACACCATCCACCAAGAGAGATACAATT-TCATGTAAATAA
194 TCGTAAAAGTTTGACAAGTTCG-----TCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAA
** * * * * *
11913836 GTTTTTAATTCAGTGACCAAAAGCTGGTTAC-AAGTGACAACCTATTTGAACCAAATGATGCGAT
254 GTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGAT
* * * * * * *
11913900 TTCTTGAGCCTGGAATGCTCTGAAAATTGCTCTAATGAAT--AGCGTCTTGAATACTTTAAGGAA
319 TTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAA
* * * * *
11913963 TCGAAGTTATAATAGAACTCATAAAAGTTTAACAAGTTCAA
383 CCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * *
11914004 AAGTTCGTCCGAGAACCAG-GAGAGATGCAATTCTCACGTAAATATG-TTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGAT-AAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
** *
11914067 AAAGTTGTTTACAAAATGACAAACTA-TTGGACCAAAT-ATTGTAATTTC-CAGAGAATGGAATG
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA-TGCGATTTCTC-GAGCATGGAATG
* * **
11914129 TTAGGGAAAT-TGCTCG-AGG-AAGGATCGTCTTGAATACTTTAAGGAATTGAAGTTA-AAAAGG
128 TTCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAA-G
* * * * *
11914190 AACTCGTAAAA-ATTGACAAGTTCATCCTAGAACCAAGAGAGATACAATTTTCACATAAATAAGT
191 AACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGT
* * * *
11914254 TTTTAATTCAAAGGCCAAAAGGT-TTTACAAAATGACAAACTATTTGGACCAAATAATGTGATTT
256 TTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTT
* * * * * *
11914318 C-CAGAGAATGGAATGTTCAGGAAATTGCTCAAAGGAAAGGATCGTCTTGAATACTTTAAGGAAT
321 CTC-GAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
* *
11914382 CG-AGTTATAAAAGAGCTCG-AAAA-TTTGACAAGTT-TGG
384 CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
** * * *
11914419 AAGTTCGTTGTTGTGTAAGAACCA-AAAGAGGTACAATTCTAACGTAAATAAG--TTTAATTCAA
1 AAGTTC------GTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAA
* * *
11914481 AGACCAAAATTTG-TTATAAAATGACAAACTATTTGGACCAAATGATGCGACTTCTCGAGCATGG
59 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* * *
11914545 AATGTTCGGGAAATGTCTCGAAGGAAAGGATCGTCTTCAATACTTTAAGGAACCGAAGTTATAAA
124 AATGTTCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAA
* * * *
11914610 ATAACTCGTAAAAGTTTGAGAAGTTCAGATGTTCGTCCAAGAACCAAAAGAGAAACAATTCTTAC
189 AGAACTCGTAAAAGTTT--G-A---CA-A-GTTCGTCCAAGAACCAAGAGAGATACAATTCTCAC
* * * * *
11914675 TTAAATAAGTTTTT-ATTCAAAGGCCAAAAGTTGGTTAC-AAATGACAAGCTATTTTGACCAAAT
246 GTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * *
11914738 GATGCGATTTCTCAAGCATGGAATGTTCGAAAAATAGCTCGAAAGAATGGATCGTCGTGAATAC-
311 GATGCGATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
**
11914802 TT--GG---C--------AAAAGAAC-CAAAAAAGTTTG---A---C--
375 TTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * *
11914829 AAGTT-GTCCAAGAACCATGAGA-AGATACAATTCTCATGTAAAATTAGTTTTTAATTTTAAAGA
1 AAGTTCGTCCAAGAACCA-GAGAGAGATA-AATTCTCACGT-AAATAAGTTTTTAA-TTCAAAGA
* * * * *
11914892 CCACAAAAGTTGTTTACAAAATGACAAACCATTGGGACGAAA-GATGTGATTTC-CCATGCAT-G
62 -C-CAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGG
* * * * *
11914954 AATGTTC-GAGAAATGA-CTGGAAGGAATGGATCGTCTTGAACACTATAAGGAACAGAAGTTATA
124 AATGTTCGGA-AAAT-ATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATA
* * *
11915017 AAAGAACTTGTAAAA-TTTGACAAGTTTGGAAGTTCGTCTAAGAACCAAGAAAGATACAATTTCT
187 AAAGAACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACAA-TTCT
** **
11915081 CACGTAAATAAGGATTTAATTTGAAGACCAAAAGAGTTGTTTAC-AAATGACAAAACTATTTGGA
243 CACGTAAATAAGTTTTTAATTCAAAGACC-AAA-AGTTGTTTACAAAATGAC-AAACTATTTGGA
* * * * *
11915145 CCTAATAATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGAAGGAATGAATCGTCTTG
305 CCAAATGATGCGATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTG
**
11915210 AATACTTTAAGGAATTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
369 AATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* ** * * **
11915265 AAGTTCCTTAAACAACCAGGAGAGAGATATA-TCTCACGTAAATAAGTTTTTAATTCAAAGATTA
1 AAGTTCGTCCAAGAACCA-GAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
11915329 AAAGCTGTTTACAAAATGACAAACAATTTAGACCAAATGATGCAACTTCCCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * *
11915394 TGGGAAATATCTCGAAGGAAAGGATCGACTTGAATAATTTTAGGAACCGAAGTTATAAAAGAACT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * * *
11915459 CGTATAAAGTTTGACAAGTTTGTCCTAGAACCTAGAGAGATACAATTCTCACATAAATAAGTTTT
195 CGTA-AAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* * *
11915524 AAATTCAATGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACC-AATGATGCGATTTCTC
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* * * * **
11915588 GTGCATGGAATGTTCGAAAAGTAGCTTGAAGGAATGGATCATCTT-AATACTTTAAGGAACTGTT
324 GAGCATGGAATGTTCGAAAA-TAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
* *
11915652 GTTATAAAAGAACTCGTAAAAGTTTTACAAGTTCCA
388 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
*
11915688 AAGTTCGTCCAAGAACCA-AGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11915752 AAAGCTGGTTAC-AAATGACAACCTATTTGGGACCAAATGATGTGATTTCTCGAGCATGGAATGC
65 AAAGTTGTTTACAAAATGACAAACTATTT-GGACCAAATGATGCGATTTCTCGAGCATGGAATG-
* * *
11915816 TT-GGAAAAT-TACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAAGTTTTAAAAGA
128 TTCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGA
* * * * * *
11915879 CCTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCAAAGAACCAGGTGAGATTCAATTCTTACATA
192 ACTCGTAAAAGTTTGACAAGTTC----G-TC--C-AAGAACCAAGAGAGATACAATTCTCACGTA
*
11915944 AATAAG--TTTAATTCAAAGACCAAAAGTTGTTTAC-AAATGACAAACAATTTGGACCAAATGAT
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
* * * * * *
11916006 GCGACTTC-CGCGCATGGAATGTTCGGGAAATATCTCGAAGGAAAAGGATCATCTTGAATAC-TT
314 GCGATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGG-AATGGATCGTCTTGAATACTTT
* * * *
11916069 AAGGAGCCAAAGTTAGAAAAGAACTCGTAAAAGTTTGACAAGTTCGA
377 AAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * *
11916116 AAGTTCATCCAAGAACTAG-GAGAAATTCAATTCTCACGTAAATAAGTTTTTTAATTCAAAGAAC
1 AAGTTCGTCCAAGAACCAGAGAGAGA-TAAATTCTCACGTAAATAAG-TTTTTAATTCAAAGACC
* * * * *
11916180 AAAAGTTGTTTATAAAATGACAAACTATTTGGAACAGAA-GATGCAATTTCCCCAGCATGGAATG
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCA-AATGATGCGATTTCTCGAGCATGGAATG
* * * * * * ** * *
11916244 CTCGAAAAAT-TCGCCAAAGGAATGGATCATCGAGAATACTTTAAGGAACCAAAGTTATAAAATA
128 TTCGGAAAATATC-TCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGA
* * * * *
11916308 ACTCGTAAAAGTTTGAGTAGTTGGATGTTCGTCCAAGAACCAAAAAGAGAAACAATTCTTACTTA
192 ACTCGTAAAAGTTTGA-CA-----A-GTTCGTCCAAGAACC-AAGAGAGATACAATTCTCACGTA
11916373 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT-AT
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
* * * *
11916437 GCGATTTCTCGAGCATGAAATGTTCGAAAAATAGCTCAAAGGAATGGATCATCGTGAATACTTTA
314 GCGATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTA
* * * *
11916502 AGGAACTGAAGTTATATAAAAGAAGTCATAAAGGTTTG---A---C--
378 AGGAACCGAAG-T-TATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11916542 AAGTTCGTCCAAGAACCA-AGCGAGATACAATTCTCATGTAAA-ATAG-TTTTAATTCAAAGACC
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATA-AGTTTTTAATTCAAAGACC
* * *
11916604 AAAAGTTAG-TTAC-AAATGACAAATTATTTGGACCAAATGATGTGATTTATCGAGCATGGAATG
64 AAAAGTT-GTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG
* * * * * * * *
11916667 CTCGGTAAATAGCTCGAAAGAATGGATCATCTCGAATACTTTAA-GAA-C----TTGTAAAAG--
128 TTCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * * *
11916724 TTTG-ACAAGTTTG-GAAGTTTGTCCAAGAACC-AG-GAG--A-GA---T---GTAAATAAGTTT
193 CTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTT
* *** * * *
11916776 TTAACTCAAAGACCAAAAGTTGTTTAGGGAATGACAAACAATTTGGACCAAATGATGTGAATTC-
258 TTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCT
* * *
11916840 CTGAGCATGGATTGTTCGAGAAAT-GTCTCGAAGGAAAGGATCATCTTGAATACTTTAAGGAACC
323 C-GAGCATGGAATGTTCGA-AAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC
* *
11916904 GAAGTTAAAAAAGAACTCGTAAAAATTTG---A---C--
385 GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * *
11916935 -AGTTCGTCCTAGAACCA-TGAGAGATACAATTATCACATAAATAAGTTTTTAATTGAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* *
11916998 AAAGTAGTTTACAAAATGACAAATTATTTGGACCAAATGATGCGATTTCT----C----AATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * **
11917055 CGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATATTTTAAGGAACTAAAGTTATAAAAGAACT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
** *
11917120 CGTAAAAGACTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAAT
195 CGTAAAAGTTTG---A----C-AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT
* * *
11917185 AAGTTTTTAATTCAGAGACCAAAAGCTTG-TTAC-AAATGACAACCTATTTGGACTAAATGATGC
252 AAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * * * ** * * *
11917248 GAATTCTTGATCCTGGAATCCTCTGAAAATTGCTCGAAGGAATGGATCATCTTGATTACTTTAAG
316 GATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
* *
11917313 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGA
380 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * *
11917357 AAGTTCATCCAAGAACCAG-GAGAGATGCAATTCTCACGTAAATAAGTTTTTAATTCAATGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGAT-AAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
11917421 AAAGTTATTTACAAAATGACAAACTATTTGGACAAAATAATGTGATTTC-CAGAGAATGG-ATGT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGT
* ** * * ** *
11917484 TCGGTAAAT-TGCTTAAAGTAAAGAATTATCTTGAATACTTTAAGGAATCGAAGTTATAAAAGAA
129 TCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * **
11917548 CTCGTAAAAATTTGACAAGTTTGGAAGTTCGTCC-A-AACCAAGAGTGATACAATTCTCATATAA
193 CTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAA
** *
11917611 ATAAGGATTCAATTCAAAGACC-AAAGTTGTTTACAAAAAATGACAAACTATTTGGACCAAATGA
250 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTAC--AAAATGACAAACTATTTGGACCAAATGA
* * * *
11917675 TGCAATTTCTCGAGCATGGAATGTTCGAGAAAT-GTCTCGAAGGAAAGAATCGTCGTGAATACTT
313 TGCGATTTCTCGAGCATGGAATGTTCGA-AAATAG-CTCGAAGGAATGGATCGTCTTGAATACTT
* *
11917739 TAAGGAACCG-ATTTAAAAAAGAACTCGTAAAAGTTTG---A---C--
376 TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * *
11917778 AAGTTCGTCCTAGTACCA-AGAGAGATACAATTCTAACATAAATAAGTTTTTAATTCAAAGACTA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11917842 AAAGTAGTTTGCAAAATGACAAACTATTTAGACCAAATGATGCGA-TTCTCGAGCGTGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * ** *
11917906 TGAAAAATAGCTTGAAGGAATCGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * * *
11917971 CGTAAAAGTCTGATAAGCTCGAAAGTTCATCCAAGAACCAAGAGAGATATAATTCTCACATAAAT
195 CGTAAAAGT-T--T--G-AC--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT
** * *
11918036 AAGTTTTTAATTCAAAGACCAAAAGTAATTTACAAAACGACAAACTATTTGGACCAAATGATGCA
252 AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCG
* *
11918101 ATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGG
317 ATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
* * * *
11918166 AACTGAAGTTAGAAAAGAACTCGTAAAAGTCTGACAAGTTCGA
381 AACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * **
11918209 AACTTCATCCAAGAACTA-AGAGAGATACAATTCTCTTGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * * * *
11918273 AAAGCTGGTTA-GAAGTGACAACCTATTTGAACCAAATGATACGATTTCTTGAGCTTGGAATGTG
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * *
11918337 CTGAAAAT-TGCTCTAAGGAATA-GATAGTCTTGAATAATTT-AGGAACCGAAGTTATAAAAGAA
130 CGGAAAATAT-CTCGAAGGAA-AGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * *
11918399 GTCGTAAAAGTTTGACAAGTTCAAAAGTTCATCCAAGAACCAGGAGAGATACTATTCTGACGTAA
193 CTCGTAAAAGTTTGACAAGTTC----G----TCCAAGAACCAAGAGAGATACAATTCTCACGTAA
* *
11918464 ATAAGTTTTTAATTCAAAGACC-AAACTGGTTTACAAAATGACAAACTATTTGGACCAAAT-ATT
250 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA-T
* * * * * * * *
11918527 GTGATTTC-CAGAGAATGGAATGTTAGGGAAATTGCT-AAAGGAAAGGATCATCTTGAATACTTT
314 GCGATTTCTC-GAGCATGGAATGTT-CGAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTT
* *
11918590 AAGGAACCGAAGTTATAAAACAACTCGTAAAAATTTGACAAGTT-TGA
377 AAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
*
11918637 AAGTTCGTCCAAGAACCAG-GAGAGATACAATTCTCACGTAAA-AAGATTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11918700 AAACTTGTTTACAAAATGACAAACTATTTGGACCAAAT-ATTGTGATTTC-CAGAGAATGGAATG
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA-TGCGATTTCTC-GAGCATGGAATG
* * * * * *
11918763 TTAGG-GAATTTGCTCAAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGGAGTTATAAATGA
128 TTCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGA
* *
11918827 ACTCGTAAAAATTTGACAAGTTTGAAAGTTCGTCCAAGAACCAGGAGAGATACAATTCTCACGTA
192 ACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTA
*
11918892 AATAAGTTTTTAATTCAAAGACCAAAATTTGTTTACAAAAATGACAAACTATTTGGACCAAATGA
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTAC-AAAATGACAAACTATTTGGACCAAATGA
* * * * *
11918957 TGCGATTTCCCGAGCATGGAATGTTCGGGAAATTGCTCGAAGGAAAGGATCATCTTGAATACTTT
313 TGCGATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTT
*
11919022 AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-T-T-
377 AAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
** * *
11919066 --G---GTCTTAGAACCA-AGAGAGATACAATGCTCACATAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11919125 AAAGTAGTTTACAAGATGACACACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
** * * * * * * *
11919190 CTAAAAATAGCTTGAAGGAATGGATCGTCGTAAATACTTTAAGGAACCGAAATTATAAAAGAAGT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * *
11919255 TGTAAAAGTTTGACAAGTTTGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATTAA-TTTT
195 CGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA-TAAGTTTT
* * * *
11919319 TAATTCAAATACCAAAAGCTGGTTA-AAAATGACAAACTATTTGGTCCAAATGATGCGATTTCTC
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* *
11919383 GAGCATGGAATGCTCGATAAATAGCTCGATGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
324 GAGCATGGAATGTTCGA-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
* *
11919448 GTTATAAAAGGACTCGTAAGAGTTTGACAAGTT-TGA
388 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
* * * *
11919484 AAGTTCGTCCAAGAACTAG-GAGAGATACAATTTTCACG-AAATTAAATTTTTAATTCAATGACC
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAA-TAAGTTTTTAATTCAAAGACC
* * * * *
11919547 AATAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCGATTTCTCGTGTATTGAATGT
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * * * * * * *
11919612 TCGGGAAATGTCTCGAAAGAAAGGATTGTGTTGAATACTTGACGGAATCGAAGTTGTAAATGAAG
129 TCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* ***
11919677 TCGTAAAAGTTTGACAAGTTTGTCCAAGAACTGTGAGAGATACAATTCTCACGTAAATAAGTTTT
194 TCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* * **
11919742 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGAACCAAATAATATGATTTC-C
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* * * * *
11919806 AGAGCATGGAATGATCGGGAAATTGCTCGAAGGAAAGGGTCGTCTTGAATACTTTAAGGAACCGA
324 -GAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGA
* * * **
11919871 CGTTAT-AAATAACTCGTAAAAGTTTGAGAAGTTCGG
387 AGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * * * * * *
11919907 ATGTTCATCCAAGAACCA-AAAGGGAAACAATTCTTACTTAAATAAGTTCTTAATTCAAAGAACA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
11919971 AAAGTTGGTTACAAAATAACAAGCAATTTAGACCAAATGATGCTATTTCTCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* ** * * * * * *
11920036 CAGAAAATAGGTCGAAGGCATGGATCAT-TGTGAATAGTTTAAGGAACCAAAGTTATAAAAGAAG
130 CGGAAAATATCTCGAAGGAAAGGATCGTCT-TGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * *
11920100 TCGTAAAGGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCA--T--GTAA----C
194 TCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* * * * * * *
11920157 TAATTGAAAGACCAAATGCTGGTTAC-AAATGACAAACAATTTGGACCAAATGATACGAATTCTC
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* * **
11920221 --G-A-GGAATGCTTGGTAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAATTGAA
324 GAGCATGGAATG-TTCGAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
* **
11920282 GTTATAAAAGAACTCGTATAAGTTTGACAAGTTCGG
388 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * ** * *****
11920318 AAGTTCATCAAAGAACCAG-GTGATG-TGAGCTT-T--CG-AACT---TTGAGGGTTC--AGA--
1 AAGTTCGTCCAAGAACCAGAGAGA-GAT-AAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * ** * * ** *
11920370 AAATAGCTTGTTGGA-AGAATCGTCTTGAAA-TGCTT-CA-CAAGGTAGAAAC-CTTAAT-TCGA
64 AAA-AG-TTGTT-TACAAAAT-GAC---AAACTATTTGGACCAA-AT-GATGCGATT--TCTCG-
* * * ** * * * *
11920429 AGCACTTGAAT-TCTCTAAGGAACCATAGCTATATTA-AAACTACGACCGGCTT-AA-AC-TT--
117 AGCA-TGGAATGT-TC---GGAA-AATATCTCGA--AGGAA--AGGATCGTCTTGAATACTTTAA
* *** ** * * ** * *
11920487 -G-A-C-TA--TATACTTGAA-TC-T--TGGTGT-ATCGAAG-TCG-CC-A-CACCCCGGGATGG
172 GGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGA-C-AAGTTCGTCCAAGAACCAAGAGA-GA
* * * * * * * * * * **
11920537 TA-AA--CTGAGTGATAAGACAAATTTTGAATGCCACAA-ACTTTGAAGAAATT-TTGATAAGTT
234 TACAATTCTCA-CG-TAA-ATAAGTTTTTAAT-TCA-AAGAC---CAA-AAGTTGTTTACAAAAT
* * * ** *
11920597 CGAACAGTTCAACGA--AGAACCAAGA-GA-GAAATATTCTC-A-CA---AATGATT--TAAAT-
290 -G-ACA----AACTATTTGGACCAA-ATGATGCGAT-TTCTCGAGCATGGAATG-TTCGAAAATA
* *** ** * * * * * * *
11920650 --TC-AAGCAAAGTTTTTTATTTTAACATAGTGATTTAGG-A-TGAAATTTATAGGTTTGAATTG
346 GCTCGAAG-GAA-TGGATCGTCTTGA-ATACT--TTAAGGAACCG-AAGTTATA------AA-AG
* * * ** **
11920710 ACCT-TTCAAGTTCCTGAATGAC-CCTTC-A
398 AACTCGTAAAAGT--T---TGACAAGTTCTA
* * * * * * * ** * * ** *
11920738 AA-TTCAGTCTTTAACTAACTTAAAAACAGACCATTAAATT-TGATTTAACTCA--TGAT-A-GC
1 AAGTTC-GTC--CAA-GAAC---CAGAGAGA-GA-TAAATTCTCACGTAAATAAGTTTTTAATTC
* * * ** * ** * ** * ** * *
11920797 -TAGCCCAAAAGTCATGTCTCTTC-ACTTGTCTTTGAGTAGAT-GA-GAGGTCATGTC-TTTTCA
57 AAAGACCAAAAGT--TGT-T-TACAAAATGAC--AAACTATTTGGACCAAATGATG-CGATTTC-
* ** * ** * * * *
11920857 TAGTCCATGG-TTAGCTT---AAAAGTCATCTTCTTTATGAAAGCTTAATGGTCCTT-AAAAGGT
114 TCGAGCATGGAAT-G-TTCGGAAAA-T-ATC-TC-GAAGGAAAG---GATCGT-CTTGAATA---
* ** * * * ** ** *** * * ** * *
11920917 GTTGTTTGTAGTCTCTTCATCTTCCATAACCGGTTGTCTTTATTGCTTGTGATGCCATGAATTGG
166 CTT-TAAGGA-AC-C--GAAGTT--ATAA-AAGAACTCGTAAAAG-TT-TGA---CA--AGTTCG
* ** ** * * * *** * * * * *
11920982 TCTTTAA-ATGCTTGAAACCGAT-CAGATT-TGAAG--AGCCACTCTTGGTCCATTTGAATAG-T
216 TC--CAAGAACCAAGAGA--GATACA-ATTCTCACGTAAATAAGT-TT--T-TAATTCAA-AGAC
* ** ** * * ** ** * *
11921041 CACAA--TGCAT-CAATTTTGA-AAGCTGATTCTTGAATAAATTTTGTGCATTTATTC-A-C---
271 CAAAAGTTGTTTACAA-AATGACAAACT-ATT-TGGACCAAATGATGCG-ATTT-CTCGAGCATG
* * * * * * ** * * **
11921097 ----CTTC-AAAAT-CCACCAA-AAACGTCCTCTTCTTGTACCAGCAAATTAAGTG-ACCAAATG
331 GAATGTTCGAAAATAGCTCGAAGGAATG-GATCGTCTTG-A--A-TACTTTAAG-GAACC----G
* * * * *
11921154 CAAACCTTTTCATGCAAA-AAC-CG-AACAACCTTTGTATGTGAATGTCCCTA
386 --AA---GTT-AT-AAAAGAACTCGTAA-AA-GTTTG-A---CAA-GT-TCTA
** * * ** *
11921204 GATCTTCTTACC-AG--CC-GA-A-A-AT-CA-T-TC-C-TAAA-ACA-TATTAAACATGCATTA
1 -AAGTTCGT-CCAAGAACCAGAGAGAGATAAATTCTCACGTAAATA-AGT-TTTTA-ATTCA--A
* ** * * ** * * * *
11921255 AGACAATTTAAACATGCCAATAAGCTAAAATGA-ATTGAACAGTCACCTAGACAAGAATAAAT-A
59 AGACCA---AAAGTTG---TTTA-C-AAAATGACA---AAC--T-ATTTGGACCA-AAT-GATGC
* * * * * * * ** ** ** * * * *
11921318 AATATT-T-AAACATTTGCAACCTGTTC--AAATTCTTATTTAACTTAAAACACCCTATT-TATA
108 GAT-TTCTCGAGCA--TGGAA--TGTTCGGAAAAT-ATCTCGAA-GGAAAGGATCGTCTTGAATA
* ** ** * * * * * ** ** *
11921378 ATAAAAATAAAC-ACACTAACT-CATGATGTTTTAATGAATGGTTT-A-AAGAT-G--C-A-AAC
166 CTTTAAGGAACCGA-AGTTA-TAAAAGAACTCGTAA--AA--GTTTGACAAGTTCGTCCAAGAAC
* * ** * * * * * *
11921434 TAA-A-TGA-ACTAATGGATTAC-TAAATGCATGACTTGATTTAATGATGCAAACTTTAACTAAC
225 CAAGAGAGATAC-AAT-TCTCACGTAAAT--A--AGTT--TTTAAT--T-CAAA---GACCAAAA
* * * * * ** *
11921495 GTGGGAGTTACATAATGCATGATAGGATTTATGATACATATTT-AACTAATAT-ATAAG-TTACT
276 GT-TG-TTTAC--AA---A--AT--GA--CA--A-AC-TATTTGGACCAA-ATGATGCGATTTCT
** * * * * *
11921557 TAATGCATGTCATTAT-TTATGATGCAAACTTAACTGATCATGAGAGTTAATGGAT-GTC---AT
323 CGA-GCATG-GA--ATGTT-CGA---AAA--T-A--GCTC--GA-AG-GAATGGATCGTCTTGAA
* * * * ** * ** * *
11921617 TAC-ATAATGCA-TGACTTTATTAAATGCAGA-TCACATAA---TG-CATG-TC-A
371 TACTTTAAGGAACCGAAGTTA-TAAAAG-A-ACTCGTAAAAGTTTGACAAGTTCTA
* ** *** ** * * * * * *** * *
11921664 TA-TT--TAAAAGATGTAGA-TTA-AT-AATGCATGACATAATTAA-ATCACAATCTTAATA-AA
1 AAGTTCGTCCAAGAACCAGAGAGAGATAAATTC-TCACGTAAATAAGTTTTTAAT-TCAA-AGAC
* ** * * ** * * * *
11921721 CATAAGAGATGCTTTTA-TGAATGACTTAATTAAATGCA-AAACACTTAATGCAAGACATAATTA
63 CA-AA-AGTTG--TTTACAAAATGAC-AAACTATTTGGACCAA-A--TGATGC--G--AT--TTC
** *** * * * * ** ** ** ** * * *
11921784 AAGATGCAAACACTTATTAAAC-TAAAATAAAACTTAAATAAAATTAAAAAGTCCTTAAAAACAT
114 TCGA-GCATGGA-ATGTT---CGGAAAAT--ATCTCGAAGGAAA--GGATCGT-CTTGAATACTT
* * * ** * * * * ** **
11921848 T-A-G--CCCAA-TAATCAATCAGGCCT-GTGAGATGTTT--C-ATTTTG-CACTTGGGCCCCTC
169 TAAGGAACCGAAGTTAT-AA-AAGAACTCGT-AAAAGTTTGACAAGTTCGTC-C--AAG-AAC-C
* *** * * * * * * * *
11921903 ATGTTTGGT-CAA-TCT--CG---AT-A-TCTTCTAATTGCATCATAACATGATGTGACCGTGCT
226 AAGAGAGATACAATTCTCACGTAAATAAGT-TTTTAATT-CA-AAGACCA-AAAGT-----TGTT
* * * * * * ** * * ** * * ****
11921959 CACATCACCAGGAGAGATTATATTCTCACGTAAAT-AAG-TTTTTAATTCAAAGCCCAAAATTTG
282 TACA--A-AATGACAAACTAT-TT-GGAC-CAAATGATGCGATTT--CTC-GAGCATGGAA--TG
** * *** * * * * **
11922022 TTTACAAAATGACAAACTATTTGGACCAAATGAAGCGATTTCCTGTGCATGGAATGTTCGGGAAA
336 -TT-C-----GA-AAA-TAGCTCGAAGGAATGGATCG---T-CT-TGAAT--ACT-TTAAGG-AA
* * * * * *
11922087 TGTCTCGAAG---GAAAGGATCAT-GTTGAATACTTTAAGGAATAGAAGTTATAAAAGAACTCGT
383 ---C-CGAAGTTATAAAAGAAC-TCG-T-AAAAGTTT---G---ACAAG-T----------TC--
11922148 AAAAGTTTGA
422 -------T-A
* ** * *
11922158 CAAGTTCGTCCAATAACCA-TTAGAGATACAATTTTCATGTAAATAAGTTTTTAATTCAAAGACC
1 -AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * *
11922222 -AAAGTTGTTTACAAAATGACAAACTA-TTGGACCAAATGAGGCGATTTC-CCATGCATGGATTG
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA-GCATGGAATG
* * * *
11922284 TTC-GAGAAATGTCTTGAAGGAAATGGATCGTCTTGAATACTATAAGGAACCGAGGTTATAAAAG
128 TTCGGA-AAATATCTCGAAGGAAA-GGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
*
11922348 AACTCGTAAAAATTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT
191 AACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT
** ** * * * *
11922413 AAATAAGGATTTAATTTGAAGACCAAAACTTGATTACAAAACGACAAACTATTTTGACCAAATGA
248 AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA
* * * *
11922478 TGCGATTTCACGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGATTACTTT
313 TGCGATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTT
* *
11922543 AAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAACTTCCA
377 AAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * *
11922590 AAGTTCATCCAAGAACC-TAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAAACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11922654 AAACTTGGTTAC-AAATGGCAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * * * *
11922718 CGAAAAATAGCTCAAAGGAATGGATCATCTTCAATA-ATTAAGGAACCAAAGTTATAAAAGAACT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * *
11922782 CGTAAAAGTTTGACAAGTTGGGAAGTTCATCAAGGAACCAGGAGAGATTA-TATTCTCACGTAAA
195 CGTAAAAGTTTGACAAGTT----CG-TC--CAA-GAACCAAGAGAGA-TACAATTCTCACGTAAA
* * * * *
11922846 TAAGTTTTTAAATGAAAGACTAAAAGTTGTGTACAAAATGACAAA-TAATTTGGACCAAAAGATG
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACT-ATTTGGACCAAATGATG
* * * * * * *
11922910 CGACTTC-CTGAGCACGGAATGCTCAGGAAAT-GTCTCAAAGAAATTGATCGTCTTGAATACTTT
315 CGATTTCTC-GAGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTT
* *
11922973 AAGGAACCAAAGTTGA-AAAAGAACTCGTGAAAGTTTG---A---C--
377 AAGGAACCGAAGTT-ATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * *
11923012 AAGTTCGTCCTAGAACCA-AGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAGACAA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11923076 AAAGTAGTTTGCAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * ** * **
11923141 CGAAAAATAGCTTGAAGGAATCGATCATCTTGAATACTTTAAGGAACTAAAGTTATAAAAGAACT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
*
11923206 CGTAAAAGTCTGGCAAGTTTGA-AAGTTCGTCCCAA-AACCAAGAGAGATACAATTCTCACATAA
195 CGT--AA-------AAGTTTGACAAGTTCGT-CCAAGAACCAAGAGAGATACAATTCTCACGTAA
* *
11923269 ATAAGTTTTTAATTCAAAGACC--------TTTGCAAAATGACAAACTATTTGGGCCAAAT-ATG
250 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* * * *
11923325 CGATTTCTCGAGCATGGAATGCTCAAAAAATAGCTTGAAGGAATGGATAGTCTTGAATACTTTAA
315 CGATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAA
** * * *
11923390 GGAATTGAAGTTATAAAAAAACTCGTAAAAGTCTGACAAGTTCGA
379 GGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11923435 AAGTTCGTCCAAGGACCA-AGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11923499 AAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * * * *
11923563 CGAAAAATAGCTCGAAGGCATGGATCGT-TGTGAATACTGTAAGGAACTGGAGTTATAAAAGAAG
130 CGGAAAATATCTCGAAGGAAAGGATCGTCT-TGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
11923627 TCGTAAAAGTTTGACAAGTTTGTCCAAGAACCAAGAGAGATACAGTTCTTATGTAAATTAGTGTT
194 TCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* * * * *
11923692 TAATTCAAAGACAAAAAGCTGGTTAC-AAATGACAAACTATTTGGACCAAATAATGCAATTTCTC
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* * * * * *
11923756 --G-A-GGAATGCTTGGTAAATAGCTCGAATGAATGGATAGTCTTGAATACTTTCAGGAACTGAA
324 GAGCATGGAATG-TTCGAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
**
11923817 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
388 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * *
11923853 AAGTTCGTCAAAGAACCAG-GAGAGATTATATTCTCACGTAAATAAGTTTTTAATTCAAAGCCCA
1 AAGTTCGTCCAAGAACCAGAGAGAGA-TAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* *
11923917 AAAG-TGTTTACAAAATGACAAACTATTTGGACCAAATGAAGCGATTTC-CTGTGCATGGAATGT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATGT
* * * * *
11923980 TCGGGAAATGTCTCAAAAAGGAAAGGATCGTGTTGAATACTTTAAGGAACAGAAGTTATAAAAGA
129 TCGGAAAATATCTC--GAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGA
* ** *
11924045 ACTCGTAAAATTTTGACAAGTTCGTCCAAGAACCATTAGAGATACAATTTTCACGTAAATAAGTT
192 ACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTT
* *
11924110 TTTAATTTAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGGGATTTC
257 TTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
* * * * * *
11924175 -CCATGCATAGATTGTTTGAGAAAT-GTCTCGAAGGAATGGATCGTCTTGAATACTATAAGGAAT
322 TCGA-GCATGGAATGTTCGA-AAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAC
* *
11924238 CGAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTT-TGG
384 CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
** *
11924278 AAGTTCGTCCAAGAACC--AGAGAGATACAATTCTCAC--AAATAAGGATTTAATTCGAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* *
11924339 AAAGTTGTTTACAAAATGACAAACTATTTCGACCAAATGATGCGATTTCACGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
** * * *
11924404 CAAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* *
11924469 CGTAAAAGTTTGACAAGTTCCAATGTTCATCCGAGAACCAAGAGAGATACAATTCTCATGTAAAT
195 CGTAAAAGTTTGACAAGTT-C---G----TCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT
* ** *
11924534 AAGTTTTTAATTCAGAGACCAAAACCTGGTTAC-AAATGAC-AACATATTTGGACCAAATGATGC
252 AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAAC-TATTTGGACCAAATGATGC
* * * * * * *
11924597 AATTTCCCGAGCATGAAATGCTCGAGAAATTGCTCGAAGGAATGGATCATCTTGAATATTTTAAG
316 GATTTCTCGAGCATGGAATGTTCGA-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
*
11924662 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGA
380 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * *
11924706 AAGTTCCT-AAAGGAACC----AG-GA-CAA-TCTCAC--ATATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAA-GAACCAGAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * ** * *
11924761 AAAGTTGTGTACAAAATGTCAAACAATTTGGACCAAATGATGTAACTTCCCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * ** * *
11924826 C-GAGAAATGTATCGAAGGAAAGGATCGTGATGAATGCTTTAAGGAACCGAAGTTATAAAAGATC
130 CGGA-AAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * *
11924890 TCGTAAAAGTTTGACAAGTTCGTCCTAGAACCAAGAAAGATACAATTCTCACATATATAAGTTTT
194 TCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* * * *
11924955 T-ATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATAATACGATTTCCC
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* * * *
11925019 GAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAGTACTTTAAGGAACTGAA
324 GAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
* * *
11925084 GTTATAAAAGAACTCTTAAAAGTTTAACAAGTTCCA
388 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11925120 AAGTTCATCCAAGAACCA-AGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
11925184 AAAGCTGGTTAC-AAATGACAACCTATTTGGAACAAGTGATGCAATTTCTCGAGCATGGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * ** * *
11925248 CGGAAAACTA-CTCGTAGGAATGGGCCTTCTTGAATACTTTAAGGAACCAAAGTTATAAAAGAAC
130 CGGAAAA-TATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * * * *
11925312 TCAT-AAAGTTTGACCATTTCGAAAGTTTGTCAAAGAACTAGGAGAGATTA-TATTCTTACGTAA
194 TCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAA
* * *
11925375 ATAAGTTTTTAATTCAAAGCCCAAAAGTTGTTTACAAAATGACAAACAATTTGGACCAAATAATG
250 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* * * * ** *
11925440 CGACTTCCCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATC-TAACATAAAAGATC
315 CGATTTCTCGAGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGT--C-TTGAATA-C
* * ** * *** * * **
11925503 TCGTAA-AATAGTGACAAGTTCGTCTTAGAAC-CAAG-AGGGATACAATTCTAAC-A-TAAATA
374 T-TTAAGGA-ACCG--AAGTT-ATAAAAGAACTC--GTA---A-A-AGTT-TGACAAGT-TCTA
* ** * * * * ***** **
11925562 AATTTTTAATTCAA-AGACCA-A-A-AG-T-AGTT-T-AC-AAAATGACAAACT-ATT--TGGAC
1 AA--GTTCGTCCAAGA-ACCAGAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGAC
** * ** * * * * * ***
11925615 CAAGTGATGTGATTTCTCGAGCATG-GAAA--GTTT-GA-AAAATAGCTTGAAGGAATGGATCG-
63 CAAAAG-T-TG-TTT-AC-AAAATGACAAACTATTTGGACCAAAT-G-ATG--CG-ATTTCTCGA
* * * * *** * * * * * * * **
11925674 TC-TTGAATACTTTAAGGAATCGATGT-TATA--AAAGAAT--TCGT-AAAAGTTTGACAAGTTC
118 GCATGGAAT--GTT-CGGAAAATATCTCGA-AGGAAAGGATCGTCTTGAATACTTT-A-AGGAAC
* ** * * * * * ** * * * **
11925732 CAAAGTTAGTCCAAGAACTAG-GAGAG-AT-ACAA-TTC-T-CACG--TGATGTGAG-CACGGTC
177 CGAAGTTA-TAAAAGAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAAT-
* * * * ** * * * * ** * * **** * **
11925788 ACATCATGT---TATG-ATGCAATTCAAAGATATCGAGATTTGCCTA-AACACGAGGGGCCCAAG
240 TC-TCACGTAAATAAGTTTTTAATTCAAAG--ACCAAAAGTTGTTTACAAAATGA-CAAACTATT
* ** ** * ** * *
11925848 T-G-CAAAATGAAT-C-A--TCTC-A-CA-GGCCTGATT-GATTATTGGGCTAATGTTTTTAA-G
301 TGGACCAAATG-ATGCGATTTCTCGAGCATGGAATG-TTCGAAAATAGCTCGAA-G----GAATG
* * ** **** ** * *
11925902 GA-C-TTTTTAATTTTA-TTTAAGTTTTATTTTAGTT-TAATAAGTGTTTGCATCTTTAATTATG
359 GATCGTCTTGAA---TACTTTAAG--GAACCGAAGTTATAA-AA--G--AAC-TC-GTAA--AAG
* * *
11925963 TCTTGCATTAAGTGTTTTG
410 T-TTG-A-CAA--GTTCTA
* * ** * ** * * * * * * * ** ** *
11925982 CATTTAAT-TAAGTCATTCATA-AAAGCAT--CTCCT-ATGTTTAACTATGTCATGCATT-ATTA
1 AAGTTCGTCCAAG--AACCAGAGAGAG-ATAAATTCTCACG--TAAATAAGTTTTTAATTCA-AA
* * * * ** * *** *** *
11926041 -ATCTACA-TCT-TTTA-AATATGACATGC-ATTATGTGATC---TGCATTTAATAAAGTCGTGC
60 GACCAAAAGT-TGTTTACAAAATGACAAACTATT-TG-GACCAAATG-ATGCGAT-TTCTCGAGC
* ** * ** * *
11926098 AT-TATATAAT--GACATCCATTAACTCTCATGATTAGTTAAGTTTGCATCATAAATAATGACAT
120 ATGGA-ATGTTCGGA-A---AAT-A-TCTC--GA--AGGAAAG---G-ATCGT--CT--TGA-AT
* * * * * * * *
11926160 GCATTAAGTAACTTAC-AAGTTAGTTAAATATGCA-TCAT-AAA-TCCT-ATCATGCATTATGT-
165 ACTTTAAGGAAC---CGAAGTTA--TAAA-A-GAACTCGTAAAAGT-TTGA-CAAG--TT-CGTC
*** * ** * * ** ** * * * **
11926219 -AACTCCCATGTTAGTTA-AAGTT-TGCATCATTAAATCAAGTCATGCATTTAGTAA-TCGATTA
218 CAAGAACCAAGAGAGATACAA-TTCT-CA-C-GTAAAT-AAGTTTTTAATTCA--AAGACCAAAA
** *** * ** * * * * ** *
11926280 GTTCATT-CAGTTTG-C--A-TCTTTAAACCATTCATTAAAGC-ATCTTCT-GTG--TTTATTTA
276 GTTGTTTACAAAATGACAAACTATTTGGACCA---AATGATGCGAT-TTCTCGAGCATGGA-AT-
* * * ** ** * *****
11926336 GTT-TAAACATGAG-T--TAGTG--TGTTATTTTCATT--ATA-AATAGGGTGTTTTAAGTTA-A
335 GTTCGAAA-AT-AGCTCGAAG-GAATG-GATCGTC-TTGAATACTTTAAGG-AACCGAAGTTATA
* * *
11926391 ATAAGAACTTG-AACAGGTTG-CAAATGTT-TA
394 A-AAGAACTCGTAAAAGTTTGAC-AA-GTTCTA
* * * ** * * * * * ** ** * *** * *
11926421 AATATTCATTTATTCTTG-TCTAG-GTGACTGTTCAA-T-TCATTTTAGCTTA-TTGGCATGTTT
1 AA-GTTC----GTCCAAGAACCAGAGAGA--GATAAATTCTCA-CGTAAATAAGTTTTTA-ATTC
* ** * * * * * * *
11926481 AAATTGTCTTAATGCATGTTT--AATATGTTTTAGGAATGA-TTTTTGG-CTGGTAAGAAGATCT
57 AAA--GACCAAAAG-TTGTTTACAAAATG----A-CAA--ACTATTTGGAC---CAA-ATGA--T
* * * * * * * * * * * * *
11926542 AGGGACGTTCAC-ATACAAAGG-TTGTTCGG----T-TTTTGCATGAAAAGGTTTG-CATTTG-G
106 -GCGA-TTTCTCGA-GC-ATGGAATGTTCGGAAAATATCTCG-AAGGAAAGGATCGTC--TTGAA
**** * * * * ** * * *** *
11926598 TCAC-TTAATTTGCTG--G-TACAAGAAGAGGATGTTTTTGGT-GGATTTTGA-AGGTGAAT-AA
164 T-ACTTTAAGGAACCGAAGTTATAA-AAGA--A-----CTCGTAAAAGTTTGACAAGTTCGTCCA
* * *** * *** * * * *
11926656 ATGCA-CAAAATTCATTCAAGAATCAGCTTTCAATATTGATGCATTGTGACTATTCAAATGGACC
220 A-GAACCAAGAGAGATACAATTCTCA-C-GT-AA-A-T-AAG--TTTTTA--ATTCAAA--GACC
* * * ** * * *
11926720 AAGAGTGGCTCTT-CAAATCTGATCGGTTTCAAGCACT-TAAAGG-CCAATTCATG-GCA--TCA
272 AAAAGTTG-T-TTACAAA----AT--G--ACAA--ACTAT-TTGGACCAAATGATGCG-ATTTCT
* ** *** * * * *** *
11926779 CAAGCAATAAAGATAACCG--ATTA--TGGAAGATGAAGGGA-C-TACAAACAACACCTTTAAGG
323 CGAGC-ATGGA-ATGTTCGAAAATAGCTCGAAG--GAATGGATCGT-C-TTGAATA-CTTTAAGG
* * * *
11926838 -ACCATTAAGCTT-TCATAAAGAA-----AATGACTTT--TAAG--CTA
381 AACC--GAAG-TTAT-A-AAAGAACTCGTAA-AAGTTTGACAAGTTCTA
*** * * * * * * ** ** * *
11926876 ACCATGGACTATGAA-AAGACATGACCTCTCATCTACTCAAAGACAAGTGAAGAGACATGACTTT
1 AAGTTCGTCCAAGAACCAGAGA-GAGAT-AAAT-T-CTC----AC--GT-AA-ATA-A-G-TTTT
*** * ** * * * * ** * **
11926940 T-GGGC-TAG-CCATCA-TGAGTTAAATCAAATTTA-ATGGTCTATTTTTAAGTTAGTTAAATG-
51 TAATTCAAAGACCAAAAGT-TGTT-TA-CAAAATGACA--AACTA--TTT--G-GA-CCAAATGA
*** * * * ***
11926999 -GCCGAATTTGAAGGGTCAAATAGGAA-CTT--GAAAGGTCAAT-TC--AGGCCTATAAATTTCG
105 TG-CG-ATTTCTCGAG-C--AT-GGAATGTTCGGAAA-AT--ATCTCGAAGG---A-AAGGATCG
* * ** *** * ** * * * **
11927057 TCCTAAATCACCATGTTAAAAAAAAAAATTGCTTGAATTTAAATCATTTGTGAGAATATTTCTCT
157 TCTTGAAT-A-C-T-TTAAGGAACCGAA--G-TT--A-TAAAAGAACTCGT-A-AA-AGTT-TGA
** * *** *** ** * ** ** * * * **
11927122 CTTGGTTCTTCGTTGAACTGTTTGA-ACTTATCAA-ACTTTC-TTCA-AAGTTTGTGATGCTCA-
208 C-AAGTTCGTCCAAGAAC--CAAGAGAGATA-CAATTCTCACGTAAATAAGTTTTTAATTCAAAG
* *** *** * * *** * *
11927182 A--A--ATTTGTCTTATCACTCTG-TTTACCA--T--CCCGGGGTG-TGGCGA-CT-TCGATACA
269 ACCAAAAGTTGT-TTA-CAAAATGACAAACTATTTGGACC-AAATGAT-GCGATTTCTCGA-GCA
** ** * * ** * * * * *
11927235 -CCAA-GATTCGAGTATATGGTC-AAGTTTAACCG-T-GTCGT-AGT--TTTAA-TATAGCTACA
329 TGGAATG-TTCGAAAATA-GCTCGAAG--GAATGGATCGTCTTGAATACTTTAAGGA-ACCGA-A
* * * ** * *
11927291 GTTCCTTAAAGAATTC--AAGTGCTTCGAATTAAGGTTTCT-
388 GTT-ATAAAAGAACTCGTAAAAG-TTTG-A-CAA-G-TTCTA
** * * ** ** * ** * *
11927330 ACCTT-GT-GAACCATTTCA-AGACGATTTTTCCAACAAGCTGTTTTTCG-AACCCTCAAAGTTC
1 AAGTTCGTCCAA-GA-ACCAGAGA-GA--GAT---A-AA--T-TCTCACGTAA--AT--AAGTTT
** * ** * * * * ** **
11927391 AGAAGCTCACATCATCTTGTAAATAAGTT-TTTA-ATTCAATGACCAAAAGTTGTTTACAAAATG
50 TTAA-TTCA-AAGA-C----CAA-AAGTTGTTTACA--AAATGA-C-AAA-CTATTT---GGACC
* * * *
11927454 ACGAACAATTTGGACCTAATGATGCGATTTCTCGAGCATGAAATGCTCGGGAAATGTCTCGAAGG
99 A----------------AATGATGCGATTTCTCGAGCATGGAATGTTCGGAAAATATCTCGAAGG
* * * *
11927519 AATGGATCGTGTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGCCATGT
148 AAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGT
* * * *
11927584 TCGTCCAAGAACCATGAGAGATACAATTATTACGTAAATAAGTTTTTAATTCAAAGACTAAAAGT
213 TCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
* * *
11927649 TGTTTACAAAATGACAAA-TCATTTGGAACAAATGATGCGATTTCTAGAGCAT-GAATATTCGAA
278 TGTTTACAAAATGACAAACT-ATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCG-A
* * * * * * * *
11927712 AAATAGCTCGAAGGAAAGAATTGTCTTTAGTACTTTAAGGAATCAAAGTT-TAAAAAGAACACGT
341 AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AAAAGAACTCGT
* **
11927776 AAAAGTTTTACAAGTTCGG
405 AAAAGTTTGACAAGTTCTA
* * * *
11927795 AAGTTCGTCCAAGAACCA-AGAGAGAAATAATTCTCTA-TTAAATAAGTTTTTAGTTTAAAGACC
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTC-ACGTAAATAAGTTTTTAATTCAAAGACC
* * * *
11927858 AATAGTTGTTTAC-AAATGACAAACTATTTGGACCAGATGATGTGATTTC-CTGAGCATGGAATA
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GAGCATGGAATG
** ** * * * *
11927921 CCCCAAAAATAGCTTGAAGGAAAGGATCGTGTTGAATACTTTTAGGAACCGAAGTTATAAAAGAA
128 TTCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* *
11927986 CTCGTAAAAGTTTGACAAGTTCGTCCTAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTT
193 CTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTT
* * *
11928051 TTAATTTAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATACGATTTCT
258 TTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCT
* * *
11928116 CGAGCATGGAATGTTCGAAAAATAGCTCGAAGGAATGGATCGTCGTGAATACTTCAAGGAACCAA
323 CGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGA
* *
11928181 AGCTATAAAAGAAGTCGTAAAAGTTTG---A---C--
387 AGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * *
11928210 AAGTTCGTCCAAGAACCA-AGACAGATACAATTCTCATGTAAATTAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * ** *
11928274 AAAGCTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGCGA-TTCTCGATAATGGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * * *
11928337 CGGTAAATAGCTCAAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAACTTATAAAAAAAAC
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AAAAGAAC
* * *
11928402 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCTAGTAGCCAGGAGAGATACAATTCTCACGTAAA
194 TCGTAAAAGTTTGACAAGTTC----G-TC--CAAG-AACCAAGAGAGATACAATTCTCACGTAAA
* * * *
11928467 TAAGTTTTTAATTCAATGACCAAAAGTTGTTTAAAAAATGACAAACCATTTGGACCAAATGAAGC
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * * * *
11928532 GATTTC-CTGTA-CATGGAATGTTCGGGAAAT-GTCTAGAAGGAAAGGATCATGTTGAATACTTT
316 GATTTCTC-G-AGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTT
* * * *
11928594 AAGGAACAGAAGATA-AAACAAAACTCATAAAAGTTTGACAAGTTC--
377 AAGGAACCGAAGTTATAAA-AGAACTCGTAAAAGTTTGACAAGTTCTA
* * * *
11928639 -A-----TCCAAGAACCATGAGAGA-TTATATTCTCACGTAAATAAATTTTTAATTTAAAGACCA
1 AAGTTCGTCCAAGAACCA-GAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
11928697 GAAGTTGTTTACAAAATGACAAA-TAATTTGGACCAAATGATGCGACTTCCCTAGTATGGAATGT
65 AAAGTTGTTTACAAAATGACAAACT-ATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * * * *
11928761 TTGGGAAATGT-ACGAAAGAAAGGATCATGTTGAATACTTTAAGGAACCGAACTTATAAAAGAAC
129 TCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * *
11928825 TCGTAAAAGTTTGACAAGCTCGTCCTAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTT
194 TCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* *
11928890 TAATTCAAACG-CCAAAAGTAGTTTACAAAAGGACAAACTATTTGGA-CAATATGATGCGATTTC
259 TAATTCAAA-GACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTC
* * * * *
11928953 TTGAGCATGGAATGTTCGTGAAATAGCTTGAAGGAATGGATTGTCTTGAATACTTTAAGGAACTG
322 TCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* * *
11929018 AAGTTATAAAAGAACTCTTAAAAGTTTCACAAGTTCCA
386 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
*
11929056 AAGTTC-TACCAAGAACCA-AGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC
1 AAGTTCGT-CCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * * * *
11929119 AAAACCTAG-TTAC-AAATGACAACCTATTTGAACCAAGTGATGCGATTTCTCGAGCATAGAATG
64 AAAA-GTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG
* * ** * *
11929182 CTCGAAAAAT-TGCTCGAAGGATTGGATCGTCTTGAATAATTTAAGGAACCGATGTTATAAAAGA
128 TTCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGA
* * * *
11929246 ACTCGTAAAAGTTTGACCATTTTAAAAGTTTGTCAAAGAACCAGGAGAGATTA-TATTCTCACGT
192 ACTCGTAAAAGTTTGA-C-------AAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGT
* * * *
11929310 AAATAAGTTTTTAATTAAAATACCAAAAGTTGTTTACGAAATGACAAACAATTTGGACCAAATGA
248 AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA
* * * * * * * *
11929375 TGCAACTTCCCGAGCATGGTATGTTCGGGAAAT-GTCTCGAAAGAAAGGATCGTGTTGAATACTT
313 TGCGATTTCTCGAGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTT
* * * *
11929439 TAAGTAACCGAAGGTATAAATGAAACTCGTAGAAGTTTG---A---C--
376 TAAGGAACCGAAGTTATAAAAG-AACTCGTAAAAGTTTGACAAGTTCTA
* * **
11929480 AAGTTCGTCCTAGAACCA-AGGGAGATACAATTCTCACAAAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11929544 AAAGTAGTTTACAAAATGAATGACAAACTATTTAGACTAAATGATGCGATTTCTCGAGCATGGAA
65 AAAGTTGTTTAC--AA--AATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAA
** * * ** * *
11929609 TGTTCAAAAAATAGCTTGAAGGAATTGATCATCTTGAATACTTTAAGGAACTGAAGTTATAAAA-
126 TGTTCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
* * **
11929673 AACTCGTAAAAGTTTGACAAGTTCCAAAATCGACCAAGAACCAAGAGGGATACAATTCTCATTTA
191 AACTCGTAAAAGTTTGACAAG-T------TCGTCCAAGAACCAAGAGAGATACAATTCTCACGTA
** * * *
11929738 AATAAGTTTTTAATTCAAAGA-TGAAAGTTGGTTAC-AAATGATAACCTATTTGGACCAAATGAT
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
* * * **
11929801 ACGATTTCTCGAGCATGGAATGCTCGAAAAATTGCTCGAAGGAATGGATCACCTTGAATACTTTA
314 GCGATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTA
* *
11929866 AGGAACCGAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTCAA
378 AGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * *
11929912 AAGTTCGTCCTAA-AACCAG-GAGAGATACAATTCACATGTAAATAAG-TTTTAAATCAATGACC
1 AAGTTCGTCC-AAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * *
11929974 AAATGTTGTTTACAAAATGACGAAA-TATTTGGACCAAATGATGCGATTTCGCGAACATGGAACG
64 AAAAGTTGTTTACAAAATGAC-AAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG
* * * * * * * * ** *
11930038 TTTGGGAATTGTCTCAAAGGAAAGGATCGTGTTTAATAC-ATAAGGAATAGAAGTTATAAAAGGA
128 TTCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * * * **
11930102 TTCATAAAAGTTTGACAAGTTCCTCTAAGAA-CAGGAGGGATACAATAATCACGTAAATAAGTTT
193 CTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTT
* *
11930166 TTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAGCAAATGATGCGATTTCC
258 TTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCT
* ** *
11930231 CGAGCATGG-ATGTTCGAAAAATAGCTTGAAGGAATGGATCGTCACGAATACTTTAAGGAACTGA
323 CGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGA
* * *
11930295 AGTTATAAAACAACTCTTAAAAGTTTGACAAGTTCCA
387 AGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * *
11930332 AAGTTCGTCCAAGAACCA-AGAGAGATACAATTCTCATGTAAATAAGTTGTTAATTCGAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11930396 AAAGATGGTTAC-AAATGACAACCTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
** * * * * * * *
11930460 CTAAAAATAGCTTGAAGGAATGGATCATCGTAAATACTTTAAGGAA-C-------TAAAAGAAGT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * *
11930517 CGTAAAAGTTTGACATGTTCGTCCAAGAACCAAGAGAGATACAATTCTCATGTAAATTAGTTTTT
195 CGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTT
*
11930582 AATTCAAAGACCAAAAGCTAG-TTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
260 AATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* * * *
11930645 --G-A-GGAATGCTCGGTAAATAGCTCGAAGGAATGGATCCTCTTGAATACTTTAAGGAATCGAA
324 GAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
* **
11930706 GTTACAAAAGAACTCGTAAAAGTTTGACAAGTTCGG
388 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * *
11930742 AAGTTCGTCAAAGAACCA-TGAGAGATAATATTCTCACATAAATAAGTTTTTAATTCAAAGACC-
1 AAGTTCGTCCAAGAACCAGAGAGAGATAA-ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * ** ** * *
11930805 AAAGATATTTACAAAATGACAAACAATTTAGACCAAATGATATGACATCCCGAGCAAGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * * * *
11930870 TGGGAAATGTCTCGATA-GAAAAGATTGTGTTCAATACTTTAAGGAA-CGAAGTTATGAAAGAAC
130 CGGAAAATATCTCGA-AGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * *
11930933 TCGTAAAAGTTTGACAAGTTCATCCTAGAAGCAACAGAGATACAATTCTCACATAAATAAGTTTT
194 TCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* * *
11930998 TAATTCAAACACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTT
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* *
11931063 GAGCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAA
324 GAGCATGGAATGTTCGA-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
* *
11931128 GTTATAAAAGAACTCTTAAAAGTTTGACAAGTTCCA
388 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * ** * *
11931164 AAGTTCGACCAAGAA-CAGAGAGATACCAATTCTCATGTAAATAAGTTTTTAATTTAAAGACCAA
1 AAGTTCGTCCAAGAACCAGAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
* * ** * * * *
11931228 AAGTTGGTTAC-AAATGGCAGCCTATTTGGACCAAGTGATGCAATTTTTCGAGCATGGAATGCTC
66 AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
** *
11931292 AAAAAAT-TGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACT
131 GGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * * * * * * * * *
11931355 CATAAAATTTTGACCA-TT--T-C-AGAATTC--GACA-A-AGAA--C-CA-G--GA-GAGATTA
195 CGTAAAAGTTTGACAAGTTCGTCCAAGAA-CCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* * * * *
11931404 T-ATTCAAAGACCAAAAGTTGTTTAAAAAATTACAAACTATATGGATCAAATGAAGCAATGAAGC
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC---G-A--
** * * * * * * *
11931468 GATCTTGTGCATGGAATGTTCGGGAAAT-GTCTCGAAGTAAAGGATCATGTTGAATACTTTAA-G
318 TTTCTCGAGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
* *
11931531 AACAGAAGTCATAAACA-AACTCGTAAAAGTTTGACAA----T-
381 AACCGAAGTTATAAA-AGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * * * *
11931569 ---TTCATCCAAGAAGCATCA-A-AAATACAATTATCACGTAATTAAGTTTTTAATTCAAAGACA
1 AAGTTCGTCCAAGAACCA-GAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * * *
11931629 AAAAGTAGTTTACAAAATGACATACTATTTGGACCAAATGAAGCAATTTCT-GTGCATGGAATGT
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * *
11931693 TC-GATAAATGTCTCGAAAGAAAGGATTGTGTTAAATACTTTAAGGAACCGAAGTTATAAAACAA
129 TCGGA-AAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * *
11931757 CTCGTAAAAGTTTGACAAGTTCATCCTAGAACCAAGAGAGATACAATTTCTCACATAAATAAGTT
193 CTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAA-TTCTCACGTAAATAAGTT
* * * * *
11931822 TTTAATTCAAACACCAAAAGTAGTTTATAAAATGACAAACTATTTGAACCAAATGATGTGATTTC
257 TTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
* * *
11931887 TCGAGCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCATCTTGAATACTTTAAGGAACTG
322 TCGAGCATGGAATGTTCGA-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11931952 AAGTTATAAAAGAACTCTTAAAAGTTTGACAAGTTCCA
386 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * * *
11931990 AAGTTGGACGAAGGA-CAAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACC-
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
11932053 AAAGCTGGTTAC-AAATGACAACCTATTTGGA-CAAGTGATGCGATTTCTTGAGCATGGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * *
11932116 CGAAAAAT-TGCACGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGATGTTATAAAAGAAC
130 CGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
11932180 TCATAAAAGTTTGACCATTTCGAAAGTTTGTCAAAGAACCAGGAGAGATTA-TACTCTCACGTAA
194 TCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGA-TACAATTCTCACGTAA
* * * *
11932244 ATAAGTTTTTAATTCAAAGACAAAAAGTAGTTTACAAAATGACATACTATTTGGACCAAATGAAG
250 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* * * * * *
11932309 CGATTTC-CTGTGCAAGGAATGTTCAGGAAAT-GTCTCGAAGGAAAGGATCATGTTGAATAC-TT
315 CGATTTCTC-GAGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTT
* * *
11932371 AAGGAACAGAAGTTATAAAAGAACTTGTAAAAGATTGACAAGTTC--
377 AAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * **
11932416 -A-----TCCAAGAACC--A-TGAGATACAAGTC-CACGTAAATAAGTTTTTAATTTAAAGACTG
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
** * *
11932471 AAAGTTGTTTACAAAATGACAAACTATACGGACCAAATGA-ACTGATTTC-CTGTGCATGGAATG
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC-GATTTCTC-GAGCATGGAATG
* * * *
11932534 TTCTGG-AAATGTCTCGAAGGAAAGGATCGTGTTGAATACTTTAAGGAACAGAAGTTCTAAAAAG
128 TTC-GGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AAAAG
* * * * *
11932598 AATTCGTAAAAGTTTGACAAGTTCGTCTAAGACCCATGAGAGATACAATAAC-CACGTAAATAAG
191 AACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAAT-TCTCACGTAAATAAG
* * * *
11932662 TTTTTAATTTAAAGACCAAAAGTTGTTTACAAAATGACAAAACTATTAGGACCAAATGAAGCAAT
255 TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC-AAACTATTTGGACCAAATGATGCGAT
* *
11932727 TTCTCGAGCATGGAATGTTCAGAAAATAGCTCGAAGGAAAGGAAT-GTCTTCAATACTTTAAGGA
319 TTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGG-ATCGTCTTGAATACTTTAAGGA
* ** ** * *
11932791 ACCGGAGTTATAAAAGAACTCACAAGTGTTTGAAAAAGTTCCA
382 ACCGAAGTTATAAAAGAACTCGTAAAAGTTTG-ACAAGTTCTA
** * *
11932834 AAGTTCGTCCAAGAACCA-AGAGAGATACAATTCTCTTGTAAATATGTTTTTAACTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * *
11932898 AAAGCTAG-TTAC-AAATTACAACCTATTTGGACAAAATGGTGCTATTTCTCAAGCATGGAATGG
65 AAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
** * * *
11932961 TCAAAAAAT-TGCTCGATGGAATGGATCATCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
129 TCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * *
11933025 CTCGTAAAAG-TTGACAAGTTTGGAAGTTTGTCAAAGAACTATGAGAGATA-ATATTCTCACATA
193 CTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACA-ATTCTCACGTA
* * * * *
11933088 AATAAG-TTTTGATTCAAAGACCAAAAGATGTTTACAAAATGACATTACAATTTAGACCAAATGA
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA-AACTATTTGGACCAAATGA
* * * * * *
11933152 TGCGACTTCCCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATTGTCGTGAATACTT
313 TGCGATTTCTCGAGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTT
*
11933216 TAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTC--
376 TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * *
11933262 --G-TC--CTAA-AACGA-AGAGAGATACAATTCTCTCCT-AATAAGTTTTTTAATTCAAAGACC
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAG-TTTTTAATTCAAAGACC
* * * *
11933319 AAAAGTAG-TTACAAAATGACAAACTATTTGGACTAAATGATTCAATTTCTCGAGCATGGAATGT
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * ** *
11933383 TC-GAGAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTAAAGTTATAAAATAA
129 TCGGA-AAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * *
11933447 CTCTTAAAACTTTGACAAGTTCCAAAGTTCGACCAATAACCAAGAGAGATACAATTCTCATGTAA
193 CTCGTAAAAGTTTGACAAGTT-C---G-T---CCAAGAACCAAGAGAGATACAATTCTCACGTAA
* * * * *
11933512 ATAAGTTTTTAATTTAAAGACCAAAAGCTG-GTAC-AAATGACAACCTATTTGGACCAAGTGATG
250 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* * * * * *
11933575 CAATTTCACGAGCATGGAATGCTCAAAAAATTGCTCGTAGGAATGGATCGTCTTGAATACTTTAA
315 CGATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAA
* * * **
11933640 GGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACCATTTCGG
379 GGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
*** * *
11933685 AAG-TCGAAAAAGAACCAG-GAGAGACTATATTCTCACATAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGA-TAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11933748 AAAGTTGTTTACAAAATGACAAACTA-TTGGACTAAATGATTCGATTTCTCGAGCATGGATTGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * *
11933812 CGAGAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGGACTGAAGTTATAAAAGAAC
130 CG-GAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * *
11933877 TCTTAAAAGTTTGACAAGTTTCAAAGTTCAACCAAAAACCAAGAGAGATACAATTCTCATGTAAA
194 TCGTAAAAGTTTGACAAG-TTC---G-T---CCAAGAACCAAGAGAGATACAATTCTCACGTAAA
** * * ** * *
11933942 TAAGTTTTTAATTCAAAGACCAAAACCTGGTTAC-AAATGACAACCTGCTCGGACCAAGTGATGC
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * *
11934006 GATTTCTCGAGCATGGAATGCTCGAAAAATTGCTCGAA-GATACGGATCGTCTTGAATACTTTAA
316 GATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGA-ATGGATCGTCTTGAATACTTTAA
* * *
11934070 GGAA-CGAAGTTATAAAAGAACTCGTAAAATTTTGACCA-TTTTA
379 GGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11934113 GAAGTTCGTCAAAGAACCAG-GAGAGATTATATTCTCACGTAAATAAAGTTTTTAATTCAAAGAC
1 -AAGTTCGTCCAAGAACCAGAGAGAGA-TAAATTCTCACGTAAAT-AAGTTTTTAATTCAAAGAC
* *
11934177 CAAAAGTTGTTTACAAAATGACAAACAATTTGGACCCAAATGATGCGACTTC-CGAGCATGGAAT
63 CAAAAGTTGTTTACAAAATGACAAACTATTTGGA-CCAAATGATGCGATTTCTCGAGCATGGAAT
* * * * *
11934241 GTT-TGAGAAATGTCTCGAAAGAAAGGATCGTGTTGAATACTTTAAGGAACCAAAGTTAATAAAA
127 GTTCGGA-AAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTT-ATAAAA
* * * * ** *
11934305 GAACTCGTAAAAGTTTGACAAGTTCGTCCTAGAACCAAAAGAGATATAATTATCATATATATAAA
190 GAACTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT-AA
* * * *
11934370 GTCTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAATTATTTGGACCAAATGATACGAT
254 GTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGAT
* * * *
11934435 TTCTCGA-CTATGGATTATTCGAGAAATAGCTTGAAGGAATGGATCATCTTGAATACTTTAAGGA
319 TTCTCGAGC-ATGGAATGTTCGA-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGA
* ** * * * *
11934499 TTTGATACGAAACGAAAGTGGAAGAGGA-TCAT-AAAG-TTGTCAAG-TCGT-
382 ----A-CCG-AA-GTTA-T--AAAAGAACTCGTAAAAGTTTGACAAGTTC-TA
* * * * * * * * *****
11934547 -GGATC-TACCCTAA-AGCTCTAGACA-A-ATGTAA-TCTGAAACGAAAACAAAGAAAGACAGAT
1 AAGTTCGT--CC-AAGAAC-C-AGAGAGAGAT-AAATTCT--CACGTAAA-TAAG-TTTTTA-AT
* * ** * * * ** * * **
11934606 T-AATTGA-CAAGAAGAATAATT-CATAACG--AAATTAAAATGAAACAAA-GATGAAATGGTTG
55 TCAA-AGACCAA-AAG-TTGTTTACAAAATGACAAACT-ATTTGGACCAAATGATGCGAT--TT-
* * * * * * * * *
11934665 GTAACGGATCCAATAGAGAATGAAATTAGG---GT-TCT-GGATGAAAGAACCGTCATTG--GAC
113 CT--C-GA-GC-AT-G-GAATG---TTCGGAAAATATCTCGAAGGAAAGGATCGTC-TTGAATAC
* * ** * * * * ** *
11934723 CTCAGAAAACATCCCAACCAGATCTGGAAAATAAAAACACACAAACAGATTTGTTAGAAGTGAT-
167 TTTA-AGGA-A--CCGA--AG-T-T--ATAA-AAGAACTCGTAAA-AG-TTTG--ACAAGT--TC
* ** ** * * * * ** **
11934787 TTAAAAGATA--AA-AGCA-A-ACTGTT-T-AGGCAAGA-ATGATTGAAACGGC-AAGA--AAAT
215 GTCCAAGA-ACCAAGAG-AGATACAATTCTCACGTAA-ATAAGTTTTTAA-TTCAAAGACCAAA-
* * * * **** ** * * * * ** **
11934841 A-TTGGATCTCCTAATTTTTGATGTTTCTTGATCGATCAGGGTAGGA-GAACG-TCCCTCTTG-A
275 AGTT-G-TTTACAAAATGACAAACTAT-TTG---GACCA---AATGATG--CGATTTCTCGAGCA
* * * ** ** ** ** * ** * ***
11934902 AGCAA-ATTC-AACTTAGAACGAAAACAACTAAATCAGTAAC-CGTAA-AC-AGAAAGAAATAAA
329 TGGAATGTTCGAAAATAGCTCG-AAGGAA-TGGATC-GT--CTTG-AATACTTTAAGGAACCGAA
* * * * * * * **
11934962 CTATATCAACTTAGAACGATGGATTAAAGATAGAAAAG--AGA
388 GT-TAT-AA--AAGAAC--TCG-TAAAAGTTTGACAAGTTCTA
* * * * * * * * * * * * *
11935003 AGAATAACGTCTAAGAGCCTTGGAAACAATATAGAATCCACAACTCCCTTCAAT-GGCTCTAATT
1 A-AGT-TCGTCCAAGAACC--AGAGA-GAGATA-AAT-----TCTCACGTAAATAAG-T-T--TT
*** * * * * ** ** *** * *
11935067 TCCCCTCCAAGA--AAGAGATCTTGGCAAGAAAAAGCTTGAAGA-TGATTCCCA-CAACCTGA-A
51 T-AATTCAAAGACCAAAAGTTGTTTACAA-AATGA-C---AA-ACT-ATTTGGACCAA-ATGATG
** *** * ** * * * *** *
11935127 AAATTGT-T--A--AAACAA-CTTCTAAAAAAATACTC-AA-G--AGCAATCTTGAAGAAAGACT
107 CGATT-TCTCGAGCATGGAATGTTCGGAAAATAT-CTCGAAGGAAAG-GATCGTCTTG-AATACT
** *** ** * * ** * ****
11935182 CAAAGAGAA-TTTA-TTATAACCAA-AA-TAATCAAAA---T-CCAGTGTTTTTTCAAGGGGGAA
168 TTAAG-GAACCGAAGTTATAA--AAGAACTCGT-AAAAGTTTGACA-AGTTCGTCCAAGAACCAA
* * ** * * ** * *
11935239 CGACCATGCTACTATAGGCCTC-C-AAAATAAGCTTTCCTAACCCTAATAGAATTCTAACCA-TT
228 -GA-GA-GATAC-A-A-TTCTCACGTAAATAAG-TTT-TTAATTC-AA-AG-A--CCAA-AAGTT
* * * ** **** * * ** ** * * * *
11935301 ACAGCTAATC-AAAT-AAAATAAAATAAAAACAAAATAAAT-TTAAGTGTGGA-TATGAGGAT-T
279 ---GTTTA-CAAAATGACAA-ACTATTTGGACCAAAT-GATGCGATTTCTCGAGCATG-GAATGT
** ** * ** ** * * * * *
11935361 TCGGCCAAGGGCTTTGAATGGGCT-CCTTGGC-TGAATTC-TTACATGATAATCC--ACTTATTA
337 TC-GAAAATAGC-TCGAA-GGAATGGATCGTCTTGAATACTTTA-A-G-GAA-CCGAAGTTA-T-
* * * * ** * ** *
11935421 AAATAAAAATTGGACCTAAAGTTAAATACTTTC-C
393 AAA-AGAACTCGTA---AAAGTTTGACAAGTTCTA
* * * ** * *** * * ** * * *
11935455 AATTTGGGCCACTTTAA-TA-ATTTAGCCT-GATAT-TCAATTAAATTACTTTCTAAACTTC-AA
1 AAGTTCGTCCA--AGAACCAGAGAGAG-ATAAAT-TCTCACGTAAATAAGTTT-TTAA-TTCAAA
** * ** * * *** *
11935515 GA--TGAACTTGTAGA-ATATTAATGGGC---CTTTTTGCAAGAACTTGGTCTTGTGATCCG-TT
60 GACCAAAAGTTGTTTACA-A--AAT-GACAAACTATTTG---G-AC-----CAAATGATGCGATT
* * * * * *** *
11935573 TGCTCTTGA-AATTGACTCATTCAAGGTCGTACAAGAAATC-C-AATGTGCCTTGGCTGCAAGAT
112 T-CTC--GAGCATGGA---A-T---GTTCGGA-AA-ATATCTCGAA-G-G-AAAGGAT-C--G-T
* ** * ** * **** * * * **
11935635 -TCGGTTTCTTTTTCAA-GAATTGAAATCTTGATTTTTCTTG-ATTCTTGAAATGTTTGA-AACA
158 CTTGAATAC--TTT-AAGGAACCG-AA----G-TTATAAAAGAACTCGT-AAAAGTTTGACAAGT
* * * * * * * ** * ** ** * *
11935696 ACAT--AATTGGACCAAGATTCG-GTTTCTTGATTTTCTTGATCAATGTGCGCATCTAGGGCCTT
213 TCGTCCAA--GAACCAAGA---GAGATAC--AATTCTCACG-T-AA-ATAAGTTTTTA----ATT
* * * * ** * ***
11935758 GGTAACGTAGTCTTCGATAGTCT-TGTT-CAATTTTG-CTTAAA-TTTGCTTGG--CTTTTGACC
264 --CAA---AGAC--CAAAAGT-TGT-TTACAA-AATGAC--AAACTAT--TTGGACCAAATGA--
** ** ** * * * *
11935817 T-CGTTATTAGTCTTG-A-GGAA-GATT-GAGCCCATCGCGTTC-ATACG-CTGGATTTTGGGTC
313 TGCG--ATTTCTCGAGCATGGAATG-TTCGA--AAATAGC--TCGA-AGGAATGGA---T-CGT-
* * * * * * * * *
11935875 CTACGACT-CGTATCA-GAACTGAAGTTACAAAATAACTC-T-AAAGTTTAACAAGTTCCA
365 CT-TGAATAC-TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * *
11935932 AAGTTCGACCAAGAACCA-ACAGACATACAATTCTCATGGAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * * *
11935996 AAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAGTGAAGTGATTTCTCTAGCATGGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * *
11936060 CGAAAAAT-TACTCGAA-GAAATGGATCGTCTTGAATACTTTAAGGAAATCAAAGTTTATAAAAG
130 CGGAAAATAT-CTCGAAGGAAA-GGATCGTCTTGAATACTTTAAGG-AACCGAAG-TTATAAAAG
* * * * *
11936123 AAATCGTAAAAGTTTGACCATTTCAGAAGTTCGTCAAAGAACCAGGAGAGAT--TATTCTCACAT
191 AACTCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT
* *
11936186 AAATAAGTTTTTAATTCAAAGACC-AAAGTTGTTTACAAAATGACAAACAATTTGGCCCAAATGA
248 AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA
* * * ** *
11936250 TGTGACTTCTCGAGCATGGAATGTTCGAGAAAT-GTCTCGAAAGAAAAGATCGTGTGTGGAATAC
313 TGCGATTTCTCGAGCATGGAATGTTCGA-AAATAG-CTCGAAGGAATGGATCGTCT-T-GAATAC
* *
11936314 TTTAAGGAAACGAAGTTATAAAA-AAGCTTGTAAAAGTTTG---A---C--
374 TTTAAGGAACCGAAGTTATAAAAGAA-CTCGTAAAAGTTTGACAAGTTCTA
** * * *
11936356 AAGTTCGTCCTTGAA-CA-AGAGAGATTAATTTCTCACATAAATAAG-TTTTAATTCAAAGACAA
1 AAGTTCGTCCAAGAACCAGAGAGAGA-TAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
*
11936418 AAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
** * * *
11936483 CAAAAAATAGCTTGAAGGAATGGATCGTGC-TGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
130 CGGAAAATATCTCGAAGGAAAGGATCGT-CTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * *
11936547 TCGTAAAAGTTTAACAA-TTCGTCCTAGAACCAAGAGGGATACAATTCTCACATAAATAAGCTTT
194 TCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTT
* *
11936611 TAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTC
259 TAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC
* * * *
11936676 GAGCATGGATTGTTCGAGAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGAAACTGAA
324 GAGCATGGAATGTTCGA-AAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAA
*
11936741 GTTATAAAAGAACTCTTAAAAGTTTGACAAGTT-TCA
388 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
* * *
11936777 AAGTTCGACCAAGAACCA-AGAGAGCTACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * ** *
11936841 AAAGCTGGTTAC-AAATGACAACCTATTTGGACC-AATGATAAGA--T-TCGAGCATGGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * *
11936901 C-GAAAAAATTGCTCGAAGGAATGGATCATCTTGAATAC-TTAAGAAACCAAAGTTATAAAAAGA
130 CGGAAAATA-T-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTAT-AAAAGA
* * * *
11936964 ACTCGTAAAAATTTGACAAGTTCTAAAGTTCGTCCTAGAACCAGGAGAGATACAATTCACACGTA
192 ACTCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTA
*
11937029 AATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACGAAA-TATTTGGACCAAATGA
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC-AAACTATTTGGACCAAATGA
* * * * * * *
11937093 TGCGA-CTC-CAGAGCATGGAATGTTCGGGAAAT-TCTTCGAAAGAAAGAATCGTGTTGAATACT
313 TGCGATTTCTC-GAGCATGGAATGTTC-GAAAATAGC-TCGAAGGAATGGATCGTCTTGAATACT
*
11937155 TTAA-GAACCGAAGTTATAAAATAACTCGTAAAAGTTTG---A---C--
375 TTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11937195 AAGTTCGTCCTAGAACCA-AG-GAGATACACATTCTCACATAAATAAGTTTTTAATTCAAAGACC
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-A-ATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * *
11937258 AAAAGTAGTTTATAAAATGATAAACTATTTGGACCAAATGATGCAATTTCTCGAGCATGGAATGT
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
** * * * * * * *
11937323 TCAAAAAATAGCTTGACGGAATGGATCATCTTGAATACTTTAAGGAACTGAAG-TATAAAAAAAC
129 TCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* **
11937387 TTGTAAAAGTTTGACAAGTTCCAAAGTTCAACCAAGAACCAAGAGAGATGA-AATTCTCATTTAA
194 TCGTAAAAGTTTGACAAGTT-C---G-T---CCAAGAACCAAGAGAGAT-ACAATTCTCACGTAA
* * * * * *
11937451 ATAAGTTTTTTATTCAAAGACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGGCCAAATGATA
250 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATG
* ** * *
11937515 CGATTTCTCGAGCATGGAATGCTCGAAAAATTTCTTGAAGGAATGGATCATCTTGAATACTTTAA
315 CGATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAA
* **
11937580 GGAACCGATGTTATAAAAGAACTCGTAAAAAATTGACAAGTTCTA
379 GGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * * * *
11937625 AATTTCATCCTAGAACTAG-GAGAGATACAATTCACACGTAAATAATTTTTTAATTCAATGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
*
11937689 AAAGTTGTTTACAAAATGATGAAA-TATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
65 AAAGTTGTTTACAAAATGA-CAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * *
11937753 TCATG-AAAT-TGCTTTGTA-GAAAGGATCATCTTGAATACTATAACGAACCGAAGTTATAAAAG
129 TC-GGAAAATAT-C-TCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAG
* * * * **
11937815 AAATCGTAAAAGTTTAACAAGTTTGAAAGTTCATCCAAGAACCAAGAGAGAAACAATTCTCAATT
191 AACTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT
* * * *
11937880 AAATAAGTTTTTAATTTAAAGACCAAAATTTATTTACAAAA-GACCAACTATTTGGACCAAATGA
248 AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA
* * * *** *
11937944 TGCAATTTC-CTGAG-ATGGAATGCTCGAAAA-ACTCCTCGAAGGAATGGATAAACATGAATACT
313 TGCGATTTCTC-GAGCATGGAATGTTCGAAAATA--GCTCGAAGGAATGGATCGTCTTGAATACT
* ** *
11938006 TCAAGGAATTGAAGTTATAAAAAGAACTTGTAAAAGTTTGACAAGTTC--
375 TTAAGGAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* ** *
11938054 -A-----TCCAAGAAACA-AGAGAGATACAATTCTCATTTAAATAAGTTTTTAATTCGAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * **
11938112 AAAGCTT-TTTAC-AAATGACAAACTATTTGTACCAAATGATGCCATTTCTTAAGCATGGAATGC
65 AAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG-
* * * * * *
11938175 TT-GAAAAATAGCTCGATGGAATGGATCATCTTGAATA-TTTAAGGAACTGAAGTTATAAAAGAA
128 TTCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* *** *
11938238 CTCGTTAAAAGTTCGACAAGTTCGAAAGTTCATCCAAGAACTGGGAGAGATACAGTTCTCACGTA
193 CTCG-TAAAAGTTTGACAAGTTC----G----TCCAAGAACCAAGAGAGATACAATTCTCACGTA
* **
11938303 AATAAGTTTTTAAATCAAAGACCAAAAGTTGCATACAAAATGACAAACTATTTGGACCAAATGAT
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
* * * * *
11938368 GCGATTTTTTCGACCATGGAATGTTCGAGAAAT-GTCTCGAAAGAAAGGATCGTCTTAAATACTT
314 GCGA-TTTCTCGAGCATGGAATGTTCGA-AAATAG-CTCGAAGGAATGGATCGTCTTGAATACTT
* *
11938432 TAAGGAACTGAAGTTATAAACGAACTCGTAAAAGTTTGACAAGTTC--
376 TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11938478 -A-----TCCAAGAACCA-AGAGAGATACAATTCTCACATAAATAAGTATTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
*
11938536 AAAGTTGTTTACAAAATGACAAACTATTTGGACAAAATGATGCGATTTCTCGAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
** * * * * ** *
11938601 CAAAAAATAGCTCAAAAGAATGGATCGTCTTGAATACTTTAAGGAACTAAATTTATAAAAGAACT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* *
11938666 CGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAAGCAAGAGAGATACAATTCTCATGTAAAT
195 CGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT
* * *
11938731 AAGTTTTTAATTCAAAGACCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAGATGATGTG
252 AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCG
* * * * * * *
11938795 ACTTCTCGAGCATGG-ATTTCTCAAAAAATAGCTAGAATGATTGGATTGTCTTGAATACTTTAAG
317 ATTTCTCGAGCATGGAATGT-TC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
** * *
11938859 GAACTAAAGTTATAGAAGAACTCGTAAAAGTTTGACAAGTTCGA
380 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
** * *
11938903 AAGTTTATCCAAGAACC-GAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAAACC-
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11938966 AAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTTGAGAATGGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * ** * *
11939030 CGGAAAATAGCTCTAAGGAATCGATCATCTTGAAATACTTTAAGGAACCAAAGTTATAAAAGAAC
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTG-AATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * * *
11939095 TCGTTAAAGTTTAACAAGTTTGAATGTTCGTCCAAGGAGCAGGAGAGATACAATTCTCTCGTAAA
194 TCGTAAAAGTTTGAC-------AA-GTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
* * *
11939160 TAAGTTTTTAACTCCAAGACCAAAAGTTGTTTACAAAATGATAAACTATTTGGACCAAATGATGC
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* *
11939225 GATTTCTCGAGCATGGAATGTTCGGGAAAT-GCCTCGAAGGAAAGGATCGTCTTGAATACTTTAA
316 GATTTCTCGAGCATGGAATGTTC-GAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAA
* * *
11939289 GGAACTGAAGTTATAAAAGAACTCATATAAGTTTG---A---C--
379 GGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
11939326 AAGTTCGTCCAAGAACCA-AGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
11939390 AAACTTGTTTACAAAATAACAAACTATTTGGACCAAATAATGCGATTTCCCAAGCATGGAATGTT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * *
11939455 C-GAGAAAT-TGCTCAAAGGAAAGGATTGTCTTGAATACTTTCAGGAACTGAAGTTATAAAAGAA
130 CGGA-AAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * * *
11939518 CTTGTTAAAGTTTGACAAGTTCGTGCAAGAACCAGGAGAGATACAATTCTCATGCAAATAAGTTT
193 CTCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTT
* * * * * *
11939583 TAAATTGAAAGACCAAAATTTGTTTAC--AA-GACAAAATATTTGGATCAAATTATGCGATTT-T
258 TTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCT
* * * * ** **
11939644 CGAGCTTGGAATGTTCGTGAAATTA-CTCGAAGGAAAGGATCATCTAAAATACTTTAAGGAACTA
323 CGAGCATGGAATGTTC--GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
* *
11939708 AAGTTAGAAAAGAACTCGTAAAACTTTGACAAGTTC-A
386 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* *
11939745 GAAGTTCGTCCACGAACCA-AGAGAGATACAATTCTCACGTAAATAAGTTTTT-ATTCGAAGACC
1 -AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
* * * * * *
11939808 AAAAAATT-ATTATAAAATGACAAACTATTTGAACCAAATGATGCAATTTCTTGAGCATGGAATG
64 -AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATG
* * * * * * * *
11939872 TTCGGGAAATGTCTCGATGGAAAGGGTAGACTTGAATACTTTTAGGAATCGAAGTTATAAAAGAA
128 TTCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * * * *
11939937 CTCATAAAAGTTT-AAAATTTTCGACCAGGAACCAAGAGAGATACTATTCTCACATAAATAAGTT
193 CTCGTAAAAGTTTGACAA-GTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTT
** *
11940001 TTTAATTCAAAGACCAAATTTTGATTT-C---ATGACAAACTATTTGGACCAAATAATGCGATTT
257 TTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTT
* * *
11940062 CTTGAGCATGGAATGTTC-ATGAAATTGCTCAAAGG-ATGGGATCGTCTTGAATACTTTAAGGAA
321 CTCGAGCATGGAATGTTCGA--AAATAGCTCGAAGGAAT-GGATCGTCTTGAATACTTTAAGGAA
* * *
11940125 CCGATGTTATAAAAGAACTTGTAAAAGTTTGAC-AGTTCTG
383 CCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * ** *
11940165 AAGTTCATCCAAGAACCA-AAAGAGAAACAATTCTTAATTAAATAAGTTTTTAATTGAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * * *
11940229 AAAGTTGTTTAC-AAATGAAAAACTATTTGGACCAGATAATGCAATATCCCGAGCTTGGAATG--
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
** * * * * * * *
11940291 CTAAAAAT-TCCTTGAAGGAATGGATCATCATAAATACTTTAAGGAATCGAAGTTATAAAATAAC
130 CGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* *
11940355 TCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAAAACCAAGAGAGATACAATTCTCATGTAAA
194 TCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
* *
11940420 TAAGTTTTTAATTCAAAGATCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGC
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * * * * *
11940484 -AATTCTCGAGCATGGAATGCTCCAAAAATAGATCAAAGGAATGG---GTCTTAAATACTTTAAG
316 GATTTCTCGAGCATGGAATG-TTCGAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
* * * * *
11940545 GAACTGGAGTTGTAAAAGAACTCGTAAAAG-TTGACATGTTCTG
380 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * ** *
11940588 AAGTTCGTCCAAGAACCA-AGAGAGAAACAATTCTTAATTAAATAAG-TTTTAATTTAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
11940651 AAAGTTGTTTAC-AAATGACAAACTATTTGGACCAGATAATGTGATTTCCCGAGCATGGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * * * *
11940715 CGAAAAAT-TCCTTGAAGGAATGGATCATCATAAATACTTTAAGGAACCGAAGTTATAAAATAAC
130 CGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * *
11940779 TCGTAAAAGTTTGACAAGTTGGAAGTTCGTCTAAAAACCAAGAGAGATACAGTTCTCATGTAAAT
194 TCGTAAAAGTTTGAC-------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT
* *
11940844 AAGTTTTTAATTCAAAAACCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGCG
252 AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCG
*
11940908 ATTTCTCGAGCATGGAATGCTCCGAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
317 ATTTCTCGAGCATGGAATG-TTCGAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGG
* *
11940973 AACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGA
381 AACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * *
11941016 AAGTTCATCCAAGAACCA-AGAGAGTTACAATTCTCATGTAAAATAAGTATTTAATTCAAAGACC
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGT-AAATAAGTTTTTAATTCAAAGACC
* *
11941080 AAATGTTGTTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGC
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * ** * *
11941144 TAGAAAAATAGGTTGAA-GAAATGGATCGTCTTGAATACTTTATGGAACCGAAGTTATAAAAGAA
129 TCGGAAAATATCTCGAAGGAAA-GGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * *
11941208 CTCGTAAAAGTTTGACAAGATTAGAAGTTCATCCAAGAA-CTAGAAGAGATATAATTCTCACGTA
193 CTCGTAAAAGTTTGAC--------AAGTTCGTCCAAGAACCAAG-AGAGATACAATTCTCACGTA
*
11941272 AATAAG-TTTTAATTGAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
* * * ** * ** *
11941336 GCGATTTCCCGAGTATGGAATGTTTGGGAATTGTCTCGAAGGAAACGATCGTCTTGAATACATTA
314 GCGATTTCTCGAGCATGGAATGTTCGAAAATAG-CTCGAAGGAATGGATCGTCTTGAATACTTTA
** * *
11941401 AGGAATTGAAGTTATAAAAGAACTCATAACAA-TTTTACAAGTTC--
378 AGGAACCGAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCTA
* * *
11941445 -A-----TCCAAGAAACA-AGAGAGATACAATTCTCACATAAATAAGTTTTAAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11941503 AAAGTTATTCACAAAATGACAAA-TCATTTGGACCAAATGATGCGATTTCTTGAGCATGGAATGT
65 AAAGTTGTTTACAAAATGACAAACT-ATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * * ** *
11941567 TTGGAAAATAGCTCGAATGAATGGATTGTCTTGAATACTTTAAGGAATTGAAGTTATAACAGAAC
129 TCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* **
11941632 TCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCAATTAAA
194 TCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
** * *
11941697 TAAGTTTTTAATTTGAAGACCAAAAGTTGTTTAC-AAATGACAAACTACTTGGACCAGATGATGC
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGC
* * ** * *
11941761 GATTTCCCGAGCATGGAATGCTCGAAAAATTCCTCGAAGGAATGGATCATCATGAATACTTTAAG
316 GATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
* * *
11941826 ACGAA-CGAAGATATAAAATAACTCGTAAAAG-TT--C--GGT-T-
380 --GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
** * * * * * * * **
11941864 --GTTCGTCCAAGAATGA-AAAGAGAAATAATTTTGACGTAACTAAGATTTTAATTCCAAGATGA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* *
11941926 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAATTGATGCGATTTCTCGAGCATGGAATGAT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * * *
11941991 C-GAAAATAACTCGAAGGCATGGATCGTCTTGAATACTTTAAGAAAACGAAGTTATAAAAGAACT
130 CGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACT
* * * * *
11942055 TGTAAAAGTTTGACAAGTTCAAAAGTTCATCCAAGAACCAAAAGAGAGACAATTATGACGTAAAT
195 CGTAAAAGTTTGACAAGTTC----G----TCCAAGAACCAAGAGAGATACAATTCTCACGTAAAT
* * * * *
11942120 AAGTTTTTAATTCAAAGATCGAAAGTTGTTTACAAAATTACAAACTATATTGGACCAAATGGTGT
252 AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT-TTGGACCAAATGATGC
* * *
11942185 GATTTCCCGAGCATGGAATGTTCAGAAAATTGCTTGAAGGAATGGATCGTCTTGAATACTTTAAG
316 GATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
* * *
11942250 CAACCAAATTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-TGA
380 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
* *
11942294 AAGTTCGTCCAAGAACCAG-GAGAGACACAATTCTCACGTAAATAAG-TTTTAATTCAATGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * *
11942357 AAAGTTATTTACCAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGA-TATTTGAATGT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCA-TGGAATGT
* * *
11942421 TTGGAAAATGTCTCGAAGGAAAGGATCGTGTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
129 TCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
*
11942486 TCGTAAAAGTTTGACAAGTTCGTCCAAGAA-CAATGAGAGATACAATTCTCACATAAATAAGTTT
194 TCGTAAAAGTTTGACAAGTTCGTCCAAGAACCAA-GAGAGATACAATTCTCACGTAAATAAGTTT
* * * * *
11942550 TTAATTCAAAGACCAAAAGCTGTTTACAAAATGACAAACTATTTGGACCAAATAATGTGAATTCC
258 TTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCT
* * * * * *
11942615 CGAGCATGCAATCTTTAGGAAATTGCTCGAAGGAAAGG-TCGTCTTGAATACTTTAAGGAACCGA
323 CGAGCATGGAAT-GTTCGAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGA
* * *
11942679 AGTTATAAATGAACTCGTAAAAGTTTGGCAAGTT-TGG
387 AGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
* * *
11942716 AAGTTCGTCCAAGAACCA-AGAGAGATACGATTCTCACGTAAATAAGGTTTTAATTCGAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * *
11942780 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGTGATTTCCCGAGCATCGAATGCT
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
* * * *
11942845 CGTG-CAAT-TGCTTGAAGAAAAGGATCGTCTTGAATATTATTTATA-GAACCGAAGTTATAAAA
130 CG-GAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATA--CTTTA-AGGAACCGAAGTTATAAAA
* *
11942907 GAACTCGTAAAAGTTTGACATGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTTA-G
190 GAACTCGTAAAAGTTTG--A----C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACG
* * *
11942971 TTAAATAAGTTTTTAATTTAAAGACCAAAAGTTGTTTAC-AAATGACAATCTATTTGGACCAGAT
247 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * ** * * *
11943035 GATGCGATTTCCCGAGCATGGAATGCTCAAAAAATTCCTAGAAGGAATGGATCATCATGAATACT
311 GATGCGATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * *
11943100 TTAAGGAACCGAAGATATAAAATAACTCGTAAAAGTTTGACAAGTT-TGG
375 TTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCT-A
* * * * * *
11943149 ATGTTTGTCCAAGAACCA-A-AGAGAAACAATTTTGACGTAAAATAAGTTTTTAATTCAAAGACG
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGT-AAATAAGTTTTTAATTCAAAGACC
*
11943212 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCAAGCATGGAATGT
64 AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * *
11943277 TCGGAAAATAACTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAAACGAAGTTATAAAAGAAC
129 TCGGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAAC
* * * * *
11943342 TCGTAAAAGTTTGACAAGTTCAAAAGTTCGTCCAAGAACCAAAAGAGAGACAATTATGATGTAAA
194 TCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAA
* * *
11943407 TAAGTTTTAAATTCAAAGATCAAAAGTTGTTTACAAAATGACAAACTATTTTGGACCAAATGGTG
251 TAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAATGATG
* * * *
11943472 TGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCATCTTGAATACTTTAA
315 CGATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAA
* * * * **
11943537 GGAATCGAATTTATAAAAGAACTCGTAACAGTTTAACAAGTTCGG
379 GGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * * *
11943582 AAGTTCATCGAAGAA-CAAAGAGAGAAACAATTCTCACATAAATAAGTTTTAAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * * * * *
11943646 AAAGTTGTTTAAAAAATGACAAACTATTTTGGAACAAATGATGCGATTTCCCGATCATTGAACGT
65 AAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * ** * *
11943711 TCAGAAAATGTCTC-AGAGGAGTGGATCATCTTGAATACTTTAAGGAACCGAATTTATAAAAGAA
129 TCGGAAAATATCTCGA-AGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * * *
11943775 CTCGTATAAGTTTGACAAGTTCGGAAGTTCGTCCAAAAACCAAAAGAGAAACAATTTTGACGTAA
193 CTCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGT-A
*
11943840 AATAAGTTTTTAATTCAAAGACGAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
* *
11943905 GCGATTTCTCAAGCATGGAATGTTCGGAAAATAACTCGAAGGAATGGATCGTCTTGAATACTTTA
314 GCGATTTCTCGAGCATGGAATGTTC-GAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTA
* *
11943970 AGGAAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAA
378 AGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * * * *
11944016 AAGTTCGTCCAAGAACCAAAAGAGAGA-CAATTATGATGTAAATAAGTTTTAAATTCAAAGATCA
1 AAGTTCGTCCAAGAACC-AGAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
* * *
11944080 AAAGTTGTTTACAAAATGACAAACTATTTTGGACCAAATGGTGTGATTTCCCGAGCATGGAATGT
65 AAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGT
* * * * *
11944145 TCGAAAAAT-TGCTCGAAGGAATGGATCATCTTGAATACTTTAAGGAATCGAATTTATAAAAGAA
129 TCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAA
* * * * *
11944209 CTCGTAACAGTTTAACAAGTTCGGAAGTTCATCGAAGAACAAAGAGAGAAACAATTCTCACATAA
193 CTCGTAAAAGTTTGACAAGTTC----G-TC--C-AAGAACCAAGAGAGATACAATTCTCACGTAA
* * *
11944274 ATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTAAAAAATGACAAACTATTTTGGAACAAATGAT
250 ATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAATGAT
* * * * * *
11944339 GCGATTTCCCGATCATTGAACGTTCAGAAAAT-GTCTC-AGAGGAGTGGATCATCTTGAATACTT
314 GCGATTTCTCGAGCATGGAATGTTC-GAAAATAG-CTCGA-AGGAATGGATCGTCTTGAATACTT
* * **
11944402 TAAGGAACCGAATTTATAAAAGAACTCGTATAAGTTTGACAAGTTCGG
376 TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * *
11944450 AAGTTCGTCCAAAAACCA-AAAGAGAAACAATTTTGACGTAAATAAGTTTTTAATTCAAAGACCA
1 AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCA
*
11944514 AAAGTTGTTTACAAAATGACAAACTATTTGGACC-AATAGATGCGATTTC-CTGATCATGGAATG
65 AAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT-GATGCGATTTCTC-GAGCATGGAATG
* * * * *
11944577 TTTGGGAAAT-TGCTCGAAGGAAAGGATCATCTTTAATACTTTAAGGAACCAAAGTTATAAAAGA
128 TTCGGAAAATAT-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGA
* * * * *
11944641 ACTCGTAAAAATTTGACAAGTTCGGAAGCTCGTCTAAGAACCATGAGAGAAAGAATTCTCACTTA
192 ACTCGTAAAAGTTTGACAAGTTC----G-TC--C-AAGAACCAAGAGAGATACAATTCTCACGTA
* * * * *
11944706 AATAAGTTTTTAATTTAAA-ACCAATAGTTGTTTAC-AAATGACAAATTTTTTGGACCAAGTGAT
249 AATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGAT
* * * *
11944769 GCTG-TTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCATGAATACTTG
314 GC-GATTTCTCGAGCATGGAATGTTCG-AAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTT
* * * *
11944833 AAAGAACCAAAGTTATAAAAGAACTCATGAAAGTTTGACAAGTTC-A
377 AAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
* * * * *
11944879 GAAGTTCGTCCAAGAACCA-AAAGATAAACAATTTTGACGTAAATAAG-TTTTAATTCAAAGACC
1 -AAGTTCGTCCAAGAACCAGAGAGAGATA-AATTCTCACGTAAATAAGTTTTTAATTCAAAGACC
*
11944942 -AAA--TGTTTACAAAATGACAAACTATTTTGGAACAAATTGATG
64 AAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAA-TGATG
11944984 TGAGCTCGTC
Statistics
Matches: 25411, Mismatches: 5156, Indels: 5021
0.71 0.14 0.14
Matches are distributed among these distances:
386 40 0.00
387 3 0.00
390 1 0.00
392 46 0.00
393 47 0.00
394 103 0.00
395 70 0.00
396 8 0.00
397 5 0.00
398 4 0.00
399 8 0.00
400 7 0.00
401 6 0.00
402 27 0.00
403 119 0.00
404 101 0.00
405 73 0.00
406 35 0.00
407 24 0.00
408 45 0.00
409 161 0.01
410 374 0.01
411 261 0.01
412 161 0.01
413 349 0.01
414 664 0.03
415 888 0.03
416 391 0.02
417 447 0.02
418 438 0.02
419 646 0.03
420 1010 0.04
421 1135 0.04
422 1917 0.08
423 2844 0.11
424 1226 0.05
425 922 0.04
426 585 0.02
427 589 0.02
428 856 0.03
429 993 0.04
430 1526 0.06
431 1431 0.06
432 637 0.03
433 721 0.03
434 786 0.03
435 123 0.00
436 93 0.00
437 70 0.00
438 48 0.00
439 50 0.00
440 28 0.00
441 35 0.00
442 43 0.00
443 44 0.00
444 58 0.00
445 39 0.00
446 34 0.00
447 37 0.00
448 51 0.00
449 49 0.00
450 40 0.00
451 87 0.00
452 72 0.00
453 69 0.00
454 75 0.00
455 58 0.00
456 89 0.00
457 114 0.00
458 89 0.00
459 71 0.00
460 97 0.00
461 66 0.00
462 54 0.00
463 50 0.00
464 60 0.00
465 62 0.00
466 59 0.00
467 51 0.00
468 46 0.00
469 33 0.00
470 31 0.00
471 50 0.00
472 21 0.00
473 18 0.00
474 10 0.00
475 26 0.00
476 39 0.00
477 38 0.00
478 34 0.00
479 22 0.00
480 28 0.00
481 28 0.00
482 23 0.00
483 14 0.00
484 14 0.00
485 16 0.00
486 8 0.00
487 1 0.00
488 14 0.00
489 7 0.00
490 6 0.00
491 3 0.00
492 11 0.00
493 3 0.00
494 9 0.00
495 13 0.00
496 15 0.00
497 4 0.00
498 8 0.00
499 3 0.00
500 13 0.00
501 7 0.00
ACGTcount: A:0.39, C:0.15, G:0.18, T:0.28
Consensus pattern (423 bp):
AAGTTCGTCCAAGAACCAGAGAGAGATAAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAA
AAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC
GGAAAATATCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTC
GTAAAAGTTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTA
ATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA
GCATGGAATGTTCGAAAATAGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGAAGTT
ATAAAAGAACTCGTAAAAGTTTGACAAGTTCTA
Found at i:11921590 original size:50 final size:50
Alignment explanation
Indices: 11921450--11921591 Score: 117
Period size: 50 Copynumber: 2.8 Consensus size: 50
11921440 AACTAATGGA
* * * * *
11921450 TTACTAAATGCATGAC-TTGATTTAATGATGCAAACTTTAACTAACGTGGGAG
1 TTACTTAATGCATGTCATT-ATTT-ATGATGCAAAC-TTAACTAACATAGAAG
* ** * * * * *
11921502 TTACATAATGCATGAT-AGGATTTATGATACATATTTAACTAATATATAAG
1 TTACTTAATGCATG-TCATTATTTATGATGCAAACTTAACTAACATAGAAG
11921552 TTACTTAATGCATGTCATTATTTATGATGCAAACTTAACT
1 TTACTTAATGCATGTCATTATTTATGATGCAAACTTAACT
11921592 GATCATGAGA
Statistics
Matches: 68, Mismatches: 19, Indels: 8
0.72 0.20 0.08
Matches are distributed among these distances:
49 1 0.01
50 43 0.63
51 8 0.12
52 16 0.24
ACGTcount: A:0.37, C:0.12, G:0.14, T:0.37
Consensus pattern (50 bp):
TTACTTAATGCATGTCATTATTTATGATGCAAACTTAACTAACATAGAAG
Found at i:11921831 original size:17 final size:17
Alignment explanation
Indices: 11921800--11921832 Score: 50
Period size: 17 Copynumber: 1.9 Consensus size: 17
11921790 CAAACACTTA
11921800 TTAAACTAAAATAAAAC
1 TTAAACTAAAATAAAAC
11921817 TTAAA-TAAAATTAAAA
1 TTAAACTAAAA-TAAAA
11921833 AGTCCTTAAA
Statistics
Matches: 15, Mismatches: 0, Indels: 2
0.88 0.00 0.12
Matches are distributed among these distances:
16 5 0.33
17 10 0.67
ACGTcount: A:0.67, C:0.06, G:0.00, T:0.27
Consensus pattern (17 bp):
TTAAACTAAAATAAAAC
Found at i:11923252 original size:638 final size:636
Alignment explanation
Indices: 11921980--11944983 Score: 11223
Period size: 638 Copynumber: 35.8 Consensus size: 636
11921970 GAGAGATTAT
* * *
11921980 ATTCTCACGTAAATAAGTTTTTAATTCAAAGCCCAAAATTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * ** *
11922045 GACCAAATGAAGCGATTTC-CTGTGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATCAT
65 GACCAAATGATGCGATTTCTC-GAGCATGGAATGCTCGAAAAATAG-CTCGAAGGAATGGATCAT
* *
11922108 GTTGAATACTTTAAGGAA-TAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC----G-T
128 CTTGAATACTTTAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTT
* ** * *
11922167 C-CAA-TAACCATTAGAGATACAATTTTCATGTAAATAAGTTTTTAATTCAAAGACC-AAAGTTG
192 CTCAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * * *
11922229 TTTACAAAATGACAAACTA-TTGGACCAAATGAGGCGATTTCCCATGCATGGATTGTTCGAGAAA
257 TGTACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTCCGA-GCATGGAATGTTCGAGAAA
* * *
11922293 TGTCTTGAAGGAAATGGATCGTCTTGAATACTATAAGGAACCGAGGTTATAAAAGAACTCGTAAA
320 TGTC-TCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAA
* **
11922358 AATTTGACAAGTTTGGAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACGTAAATAAGGAT
384 AATTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTT
** * * * * * *
11922423 TTAATTTGAAGACCAAAACTTGATTACAAAACGACAAACTATTTTGACCAAATGATGCGATTTCA
441 TTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCT
* *
11922488 CGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGATTACTTTAAGGAACCGA
506 CGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGA
* *
11922553 AGTTATAAAAGAACTCGTAAAAGTTTGACAACTTCCAAAGTTCATCCAAGAACCTAGAGAGATAC
571 AGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATAC
11922618 A
636 A
* * *
11922619 ATTCTCATGTAAATAAGTTTTTAATTCAAAAACCAAAACTTGGTTACAAATGGCAAACTATTTGG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
*
11922684 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCAAAGGAATGGATCATCTT
66 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCTT
* * * *
11922749 CAATA-ATTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTGGGAAGTTCATC
131 GAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-TC
* * * *
11922813 AAGGAACCAGGAGAGATTA-TATTCTCACGTAAATAAGTTTTTAAATGAAAGACTAAAAGTTGTG
195 AAGGAACCAGGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTG
* * *
11922877 TACAAAATGACAAATAATTTGGACCAAAAGATGCGACTTCCTGAGCACGGAATGCTC-AGGAAAT
259 TACAAAATGACAAAT-ATTTGGACCAAATGATGCGACTTCC-GAGCATGGAATGTTCGA-GAAAT
* * * *
11922941 GTCTCAAAGAAATTGATCGTCTTGAATACTTTAAGGAACCAAAGTTGA-AAAAGAACTCGTGAAA
321 GTCTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTT-ATAAAAGAACTCGTAAAA
* *
11923005 GTTTGACAAGTTCGTCCTAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAA
385 ATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAA
* * * *
11923070 AGACAAAAAGTAGTTTGCAAAATGACAAACTATTTAGACCAAATGATGTGATTTCTCGAGCATGG
450 AGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* * * *
11923135 AATGTTCGAAAAATAGCTTGAAGGAATCGATCATCTTGAATACTTTAAGGAACTAAAGTTATAAA
515 AATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAA
* * ** *
11923200 AGAACTCGTAAAAGTCTGGCAAGTTTGAAAGTTCGTCCCAA-AACCAAGAGAGATACA
580 AGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCAT-CCAAGAACCAAGAGAGATACA
* * *
11923257 ATTCTCACATAAATAAGTTTTTAATTCAAAGA-C----CTTTG-CA-AAATGACAAACTATTTGG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
* * *
11923315 GCCAAAT-ATGCGATTTCTCGAGCATGGAATGCTCAAAAAATAGCTTGAAGGAATGGAT-AGTCT
66 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCA-TCT
*** * *
11923378 TGAATACTTTAAGGAATTGAAGTTATAAAAAAACTCGTAAAAGTCTGACAAGTTCGAAAGTTCGT
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-T
* * *
11923443 CCAAGG-ACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTG-
194 -CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * *
11923506 GTTAC-AAATGACAACCTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAAAAA
258 G-TACAAAATGACAA-ATATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAGAAA
* ** * * * *
11923570 TAG-CTCGAAGGCATGGATCGT-TGTGAATACTGTAAGGAACTGGAGTTATAAAAGAAGTCGTAA
320 T-GTCTCAAAGAAATGGATCGTCT-TGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAA
* * * * ** * *
11923633 AAGTTTGACAAGTTTGTCCAAGAACCAAGAGAGATACAGTTCTTATGTAAATTAGTGTTTAATTC
383 AAATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTC
* * * *
11923698 AAAGACAAAAAGCT-GGTTAC-AAATGACAAACTATTTGGACCAAATAATGCAATTTCTC--G-A
448 AAAGACCAAAAG-TAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCA
* ** * * * *
11923758 -GGAATGCTTGGTAAATAGCTCGAATGAATGGATAGTCTTGAATACTTTCAGGAACTGAAGTTAT
512 TGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTAT
** * * * *
11923822 AAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGAACCAGGAGAGATTA-T
577 AAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGA-TACA
* * *
11923882 ATTCTCACGTAAATAAGTTTTTAATTCAAAGCCCAAAA-GTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * ** * *
11923946 GACCAAATGAAGCGATTTC-CTGTGCATGGAATGTTCGGGAAAT-GTCTCAAAAAGGAAAGGATC
65 GACCAAATGATGCGATTTCTC-GAGCATGGAATGCTCGAAAAATAG-CTC--GAAGGAATGGATC
* * *
11924009 GTGTTGAATACTTTAAGGAA-CAGAAGTTATAAAAGAACTCGTAAAATTTTGACAAGTTC----G
126 ATCTTGAATACTTTAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAG
** * *
11924069 -TC-CAA-GAACCATTAGAGATACAATTTTCACGTAAATAAGTTTTTAATTTAAAGACCAAAAGT
190 TTCTCAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
* * * * * * *
11924131 TGTTTACAAAATGACAAACTATTTGGACCAAATGATGGGATTTCCCATGCATAGATTGTTTGAGA
255 TGTGTACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTCCGA-GCATGGAATGTTCGAGA
* * *
11924196 AATGTCTCGAAGGAATGGATCGTCTTGAATACTATAAGGAATCGAAGTTATAAAAGAACTCGTAA
318 AATGTCTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAA
**
11924261 AAATTTGACAAGTTTGGAAGTTCGTCCAAGAACC-AGAGAGATACAATTCTCAC--AAATAAGGA
383 AAATTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTT
* * *
11924323 TTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTCGACCAAATGATGCGATTTC
440 TTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
* ** *
11924388 ACGAGCATGGAATGTTCAAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCG
505 TCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTG
* *
11924453 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAATGTTCATCCGAGAACCAAGAGAGATA
570 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATA
11924518 CA
635 CA
* * *
11924520 ATTCTCATGTAAATAAGTTTTTAATTCAGAGACCAAAACCTGGTTACAAATGAC-AACATATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAAC-TATTTG
* * * * *
11924584 GACCAAATGATGCAATTTCCCGAGCATGAAATGCTCGAGAAATTGCTCGAAGGAATGGATCATCT
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCT
* *
11924649 TGAATATTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCCT
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTT-CT
* *
11924714 AAAGGAACC---AG-G--ACAA-TCTCAC--ATATAAGTTTTTAATTCAAAGACCAAAAGTTGTG
194 CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTG
* * **
11924770 TACAAAATGTCAAACAATTTGGACCAAATGATGTAACTTCCCGAGCATGGAATGTTCGAGAAATG
259 TACAAAATGACAAA-TATTTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAGAAATG
* * ** * * * *
11924835 TATCGAAGGAAA-GGATCGTGATGAATGCTTTAAGGAACCGAAGTTATAAAAGATCTCGTAAAAG
322 TCTC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAAAA
* * *
11924899 TTTGACAAGTTCGTCCTAGAACCAAGAAAGATACAATTCTCACATATATAAGTTTTT-ATTCAAA
386 TTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAA
* * *
11924963 GACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATAATACGATTTCCCGAGCATGGA
451 GACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
*
11925028 ATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAGTACTTTAAGGAACTGAAGTTATAAAA
516 ATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAA
* *
11925093 GAACTCTTAAAAGTTTAACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATACA
581 GAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATACA
* *
11925149 ATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGC-TGGTTACAAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGGTTACAAATGACAAACTATTTG
* * * * * ** *
11925213 GAACAAGTGATGCAATTTCTCGAGCATGGAATGCTCGGAAAACTA-CTCGTAGGAATGGGCCTTC
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTC-GAAAAATAGCTCGAAGGAATGGATCATC
* * * *
11925277 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCAT-AAAGTTTGACCATTTCGAAAGTTTG
129 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAG-TTC
* * * * *
11925341 TCAAAGAACTAGGAGAGATTA-TATTCTTACGTAAATAAGTTTTTAATTCAAAGCCCAAAAGTTG
193 TCAAGGAACCAGGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * *
11925405 TTTACAAAATGACAAACAATTTGGACCAAATAATGCGACTTCCCGAGCATGGAATGTTCGGGAAA
257 TGTACAAAATGACAAA-TATTTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAGAAA
*
11925470 TGTCTCGAAGGAAA-GGA---TC-T--A-AC-AT----AA---AAG--AT-------CTCGT-AA
320 TGTCTC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAA
* ** * * *
11925509 AATAGTGACAAGTTCGTCTTAGAACCAAGAGGGATACAATTCTAACATAAATAAATTTTTAATTC
384 AAT-TTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTC
* *
11925574 AAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAGTGATGTGATTTCTCGAGCAT
448 AAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCAT
* *
11925639 GGAAAGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAA-TCGATGTTAT
513 GGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACT-GAAGTTAT
* * *
11925703 AAAAGAATTCGTAAAAGTTTGACAAGTTCCAAAGTT-AGTCCAAGAACTAGGAGAGATACA
577 AAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCA-TCCAAGAACCAAGAGAGATACA
* * * * * *
11925763 ATTCTCACGTGATGTGAGCACGGTCACATCATGTTATGATGCAATTCAAAGATATCGAGATTTGC
1 ATTCTCACGT-A----A--A---T---A--A-GTT-T--T-TAATTCAAAG--ACCAAAACTTGG
* * **** * ** * * * * * ** *
11925828 CTA-AACACGAGGGGCCCAAGT-G-CAAAATGAAT-C-ATCTCAC-AGGCCTGATTGATTATTGG
44 TTACAA-ATGA-CAAACTATTTGGACCAAATG-ATGCGATTTCTCGA-G-C--ATGGAATGCTCG
*** * ** * *** * ** ****
11925887 GCTAAT-GTTTTTAAGGACTTTTTAAT-TT---TA-TTTAAGTTTTATTTTAGTT-TAATAAGTG
102 AAAAATAG-CTCGAAGGAATGGATCATCTTGAATACTTTAAG--GAACCAAAGTTATAA-AA--G
** * * * * *** ** * *** *
11925945 TTTGCATCTTTAATTATGTCTTG-C-A-TT--AAGTGTTTTGCATTTAATTAAGTCATTCATAAA
161 --AAC-TC-GTAA--AAGT-TTGACAAGTTCGAA-AGTTCT-CAAGGAA-CCAG-GAGAGATACA
* * * * ** ** * * * * * * *
11926005 AGCATCTCCTATGTTTAACTATGTCATGCATT-ATTA-ATCTACA-TCT-TTTA-AATATGACAT
215 A--TTCT-C-ACG--TAAATAAGTTTTTAATTCA-AAGACCAAAAGT-TGTGTACAAAATGACAA
** ** * ** * * * ** ** * * ** *
11926065 GCATTATGTGATCTGCATTTAATAAAGTCGTGC-ATTATATAATGACATCCATTAA-CTCTCATG
272 ATATT-TG-GA-C--CAAATGAT-GCGACTTCCGAGCATGGAATG--TTCGAGAAATGTCTCA--
* * * ** *
11926128 ATTAGTTAAGTTTGCATCATAAAT-AATGACATGCATTAAGTAACTTAC-AAGTTAGTTAAATAT
327 A--AG--AA--ATGGATCGT-CTTGAAT-AC-T--A-TAAGGAAC---CGAAGTTA--TAAA-A-
* * * * * *** * ** *
11926191 GCA-TC--ATAAATCCT-ATCATGCATTATGT--AACTCCCATGTTAGTTA-AAGTT-TGCATCA
373 GAACTCGTAAAAAT-TTGA-CAAG--TT-CGTCCAAGAACCAAGAGAGATACAA-TTCT-CA-CA
** ** * * * * * * *** * **
11926248 TTAAATCAAGTCATGCATTTAGTA-ATC--GATTAGTTCATTCAGTTTG-C--A-TCTTTAAACC
430 -TAAAT-AAGTTTTTAATTCA-AAGACCAAAAGTAGTT--TACAAAATGACAAACTATTTGGACC
* * * * ** * * *
11926306 ATTCATTAAAGC-ATCTTCT-GTG--TTTATTTAGTTT-AAACATGAG-TT--AGTG--TGTTAT
490 A---AATGATGCGAT-TTCTCGAGCATGGA-AT-GTTTGAAAAAT-AGCTTGAAG-GAATG-GAT
** ** * *** * * * *
11926361 TTTCATT--ATA-AATAGGGTGTTTTAAGTTA-AATAAGAACTTG-AACAGGTTG-CAAATGTT-
546 CGTC-TTGAATACTTTAAGG-AACTGAAGTTATAA-AAGAACTCGTAAAAGTTTGAC-AA-GTTC
* * * ** * * * * *
11926419 TAAATATTCATTTATTCTTG-TCTAGGTGACTG-TTCA
606 CAAA-GTTC----ATCCAAGAACCAAGAGA--GATACA
** ** * *** * * * * ** * * * *
11926455 A-T-TCATTTTAGCTTA-TTGGCATGTTTAAATTGTCTTAATGCATGTTTA-ATATGTTTTAGGA
1 ATTCTCA-CGTAAATAAGTTTTTA-ATTCAAA--GAC-CAAAACTTGGTTACAAATG----A-CA
* * * * * * * * * * **** *
11926516 ATGA-TTTTTGG-CTGGTAAGAAGATCTAGGGACGTTCAC-ATACAAAGG-TTGTTCG-GTTTTT
56 A--ACTATTTGGAC---CAA-ATGA--T-GCGA-TTTCTCGA-GC-ATGGAATGCTCGAAAAATA
* * * ** * * ** * ***
11926576 GCAT-GAA--AA-GGTTTGCAT-TTGGTCACTTAATTTGCTGGTACAAGAAG--A-GGATGTTTT
109 GC-TCGAAGGAATGG-AT-CATCTT-G--A-ATACTTT-AAGGAACCA-AAGTTATAAAAG-AAC
* ** * * * * * * ** *
11926633 TGGT-GGATTTTG--AAGGT-GAATAAATGCACAA--AATTCATTCA-AGA-ATCAGCTT-TCA-
164 TCGTAAAAGTTTGACAAGTTCG-A-AAGTTCTCAAGGAA-CCA-GGAGAGATA-CA-ATTCTCAC
* * * * * * * * * *
11926688 AT-ATTGATGCATTGTGACTATTCAAATGGACCAAGAGTGGCTCTTCAAATCTGATCGGTTTCAA
223 GTAAAT-AAG--TTTTTA--ATTCAAA--GACCAAAAGTTG-TGTACAAA----AT--G--ACAA
** * * * * * * * * *** * **
11926752 GCACTTAAAGG-CCAATTCATG-G-CATCACAAGCAAT--AAAGAT-AACCGAT-TATGGAAGAT
272 ATA-TT--TGGACCAAATGATGCGACTTC-CGAGC-ATGGAATGTTCGAGAAATGTCTCAAAGA-
* *** * * * * **
11926810 GAAGGGA-C-TACAAACAACACCTTTAAGG-ACCATTAAGCTT-TCATAAAGAAAAT-G---ACT
331 -AATGGATCGT-C-TTGAATA-CTATAAGGAACC--GAAG-TTAT-A-AAAG-AACTCGTAAAAA
* ** * * * * * * * *
11926867 TTTAAGCTAACCATGGACTATGAA--AAGACATGACCT-CTCATCTACTCAAAGACAAGTGAAGA
386 TTTGA-C-AA-GTTCGTCCAAGAACCAAGAGA-GA--TAC-AAT-T-CTCACATA-AA-T--A-A
*** * * **** ** * * * ** *
11926929 GACATGACTTTTGGGCTAGCCATCA-TGAGTTAAATCAAATTTA-ATGGTCTATTTTTAAGTTAG
437 GTTTTTAATTCAAAG--A-CCAAAAGT-AGTT-TA-CAAAATGACA--AACTA--TTT--G-GA-
** *** * * ** * * * **
11926992 TTAAATG--GCCGAATTTGAAGGGTCAAATAGGAA--CTTGAAAGGTCA-ATT-CAGGCCTATAA
488 CCAAATGATG-CG-ATTTCTCGAG-C--AT-GGAATGTTTGAAAAAT-AGCTTGAAGG--AATGG
* * * *** * * * * *
11927051 ATTTCGTCCTAAATCACCATGTTAA-AAAAAAAAATTGCT---TGAA-T-TTAAATCATTTGTGA
544 A--TCGTCTTGAAT-A-C-T-TTAAGGAACTGAAGTT-ATAAAAGAACTCGTAAA--AGTT-TGA
* * *** * *** *** **
11927110 GAATATTTCTCTCTTGGTTCTTCGTTGAACTGTTTGA-ACTTATCA
599 -CA-A-GT-TC-CAAAGTTCATCCAAGAAC--CAAGAGAGATA-CA
* ** ** * * * ** ** *
11927155 A-ACTTTC-TTCA-AAGTTTGTGA-T----G-CTCAAAA-TTTG-T-CTTAT--CACTCTGTTTA
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGAC-CAAAACTTGGTTACAAATGACAAACTATTT-
** *** * * * ** * *
11927206 CCATCCCGGGGTG-TGGCGACTTCGATAC-ACCA-AG-AT--TCG-AGTATATGGTC-AAGTTTA
64 GGA--CC-AAATGAT-GCGATTTC--T-CGAGCATGGAATGCTCGAAAAATA-GCTCGAAG--GA
* * * ** * ** **
11927263 ACCGTG-TCGTAGT-TTTAATA-TAGCTACA-GTTCCTTAAAG-AATTCAAGTGCTTCG-AATTA
119 A-TG-GATC--A-TCTTGAATACT--TTA-AGGAACC--AAAGTTATAAAAGAAC-TCGTAA--A
** * * ** * * * **
11927322 AGGTTT--CTACCTTGTGAACCA-TT-TCAAGACGATTTTTCCAACAAGCTGTTTTTCGAACCCT
171 A-GTTTGAC-AAGTT-CGAA--AGTTCTCAAG--GA----ACC-AGGAG-AG--ATAC-AATTCT
* * ***** *
11927383 CAAAGTTCAGAAGCTCACA-TCATCTTGTAAAT--AAGTTTTTAA-TTCAATG-ACCAAAAGTTG
220 C-ACG-T-A-AA--T-A-AGT--T-TT-TAATTCAAAGACCAAAAGTT--GTGTA-CAAAA--TG
* * * * * *
11927443 TTTACAAA-ATGACGAACAATTTGGACCTAATGATGCGATTTCTCGAGCATGAAATGCTCGGGAA
268 ---ACAAATAT-T---------TGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAGAA
* * * *
11927507 ATGTCTCGAAGGAATGGATCGTGTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAA
319 ATGTCTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAA
* * * * * * *
11927572 AGTTTGCCATGTTCGTCCAAGAACCATGAGAGATACAATTATTACGTAAATAAGTTTTTAATTCA
384 AATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCA
* * * *
11927637 AAGACTAAAAGTTGTTTACAAAATGACAAA-TCATTTGGAACAAATGATGCGATTTCTAGAGCAT
449 AAGACCAAAAGTAGTTTACAAAATGACAAACT-ATTTGGACCAAATGATGCGATTTCTCGAGCAT
* * * * * * * * *
11927701 -GAATATTCGAAAAATAGCTCGAAGGAAAGAATTGTCTTTAGTACTTTAAGGAA-TCAAAGTT-T
513 GGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACT-GAAGTTAT
* * ** * * *
11927763 AAAAAGAACACGTAAAAGTTTTACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAATA
577 -AAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATACA
* * * * * *
11927824 ATTCTCTA-TTAAATAAGTTTTTAGTTTAAAGACCAATAGTTGTTTACAAATGACAAACTATTTG
1 ATTCTC-ACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTG
* * * * * * * * *
11927888 GACCAGATGATGTGATTTC-CTGAGCATGGAATACCCCAAAAATAGCTTGAAGGAAAGGATCGTG
65 GACCAAATGATGCGATTTCTC-GAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATC
* *
11927952 TTGAATACTTTTAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC----G-TC-
129 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCT
* * * * * *
11928011 CTA-GAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTTAAAGACCAAAAGTAGTT
194 CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTG
* * *
11928075 TACAAAATGACAAACTATTTGGACCAAATGATACGATTTCTCGAGCATGGAATGTTCGAAAAATA
259 TACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAGAAAT-
* * * * * *
11928140 G-CTCGAAGGAATGGATCGTCGTGAATACT-TCAAGGAACCAAAGCTATAAAAGAAGTCGTAAAA
321 GTCTCAAAGAAATGGATCGTCTTGAATACTAT-AAGGAACCGAAGTTATAAAAGAACTCGTAAAA
* * ** *
11928203 GTTTGACAAGTTCGTCCAAGAACCAAGACAGATACAATTCTCATGTAAATTAGTTTTTAATTCAA
385 ATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAA
* **
11928268 AGACCAAAAGCT-GGTTAC-AAATGACAAACTATTTGGACCAAATGATGCGA-TTCTCGATAATG
450 AGACCAAAAG-TAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATG
* * ** ** ** *
11928330 GAATGCTCGGTAAATAGCTCAAAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAACTTATAA
514 GAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTAT-A
* * * * * *
11928395 AAAAAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGT-CTAGTAGCCAGGAGAGATACA
578 AAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAG-AACCAAGAGAGATACA
* * * * *
11928454 ATTCTCACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTAAAAAATGACAAACCATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTT-ACAAATGACAAACTATTTG
* * ** * *
11928519 GACCAAATGAAGCGATTTC-CTGTA-CATGGAATGTTCGGGAAAT-GTCTAGAAGGAAAGGATCA
65 GACCAAATGATGCGATTTCTC-G-AGCATGGAATGCTCGAAAAATAG-CTCGAAGGAATGGATCA
* * * *
11928581 TGTTGAATACTTTAAGGAA-CAGAAGATA-AAACAAAACTCATAAAAGTTTGACAAGTTC---A-
127 TCTTGAATACTTTAAGGAACCA-AAGTTATAAA-AGAACTCGTAAAAGTTTGACAAGTTCGAAAG
* * * * *
11928640 -TC-CAA-GAACCATGAGAGATTA-TATTCTCACGTAAATAAATTTTTAATTTAAAGACCAGAAG
190 TTCTCAAGGAACCAGGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG
* * * * *
11928701 TTGTTTACAAAATGACAAATAATTTGGACCAAATGATGCGACTTCCCTAGTATGGAATGTTTGGG
254 TTGTGTACAAAATGACAAAT-ATTTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAG
* * * * *
11928766 AAATGTAC-GAAAGAAA-GGATCATGTTGAATACTTTAAGGAACCGAACTTATAAAAGAACTCGT
317 AAATGT-CTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGT
* * *
11928829 AAAAGTTTGACAAGCTCGTCCTAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAAT
381 AAAAATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAAT
* *
11928894 TCAAACG-CCAAAAGTAGTTTACAAAAGGACAAACTATTTGGA-CAATATGATGCGATTTCTTGA
446 TCAAA-GACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAA-ATGATGCGATTTCTCGA
* ** *
11928957 GCATGGAATGTTCGTGAAATAGCTTGAAGGAATGGATTGTCTTGAATACTTTAAGGAACTGAAGT
509 GCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGT
* *
11929022 TATAAAAGAACTCTTAAAAGTTTCACAAGTTCCAAAGTTC-TACCAAGAACCAAGAGAGATACA
574 TATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCAT-CCAAGAACCAAGAGAGATACA
* * * * *
11929085 ATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAACCTAGTTACAAATGACAACCTATTTGA
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
* * * * *
11929150 ACCAAGTGATGCGATTTCTCGAGCATAGAATGCTCGAAAAATTGCTCGAAGGATTGGATCGTCTT
66 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCTT
* * * * * ** *
11929215 GAATAATTTAAGGAACCGATGTTATAAAAGAACTCGTAAAAGTTTGACCATTTTAAAAGTTTGTC
131 GAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAG-TTCTC
* * * * *
11929280 AAAGAACCAGGAGAGATTA-TATTCTCACGTAAATAAGTTTTTAATTAAAATACCAAAAGTTGTT
195 AAGGAACCAGGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTG
* * * * *
11929344 TACGAAATGACAAACAATTTGGACCAAATGATGCAACTTCCCGAGCATGGTATGTTCGGGAAATG
259 TACAAAATGACAAA-TATTTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAGAAATG
* * * * * *
11929409 TCTCGAAAGAAA-GGATCGTGTTGAATACTTTAAGTAACCGAAGGTATAAATGAAACTCGTAGAA
322 TCTC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAG-AACTCGTAAAA
* * * *
11929473 GTTTGACAAGTTCGTCCTAGAACCAAGGGAGATACAATTCTCACAAAAATAAGTTTTTAATTCAA
385 ATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAA
* *
11929538 AGACCAAAAGTAGTTTACAAAATGAATGACAAACTATTTAGACTAAATGATGCGATTTCTCGAGC
450 AGACCAAAAGTAGTTTAC--AA--AATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGC
** * *
11929603 ATGGAATGTTCAAAAAATAGCTTGAAGGAATTGATCATCTTGAATACTTTAAGGAACTGAAGTTA
511 ATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTA
* *
11929668 TAAAA-AACTCGTAAAAGTTTGACAAGTTCCAAA-ATCGA-CCAAGAACCAAGAGGGATACA
576 TAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTC-ATCCAAGAACCAAGAGAGATACA
** ** * * *
11929727 ATTCTCATTTAAATAAGTTTTTAATTCAAAGA-TGAAAGTTGGTTACAAATGATAACCTATTTGG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
* * *
11929791 ACCAAATGATACGATTTCTCGAGCATGGAATGCTCGAAAAATTGCTCGAAGGAATGGATCACCTT
66 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCTT
* * *
11929856 GAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTCAAAAGTTCGTC
131 GAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-T-
* * * * *
11929921 CTAA--AACCAGGAGAGATACAATTCACATGTAAATAAG-TTTTAAATCAATGACCAAATGTTGT
194 C-AAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * * * * * *
11929983 TTACAAAATGACGAAATATTTGGACCAAATGATGCGATTTCGCGAACATGGAACGTTTGGGAATT
258 GTACAAAATGAC-AAATATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAGAAAT
* * ** * * *
11930048 GTCTCAAAGGAAA-GGATCGTGTTTAATAC-ATAAGGAATAGAAGTTATAAAAGGATTCATAAAA
321 GTCTCAAA-GAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAAA
* * * * * ** *
11930111 GTTTGACAAGTTCCTCTAAGAA-CAGGAGGGATACAATAATCACGTAAATAAGTTTTTAATTCAA
385 ATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAA
* * *
11930175 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAGCAAATGATGCGATTTCCCGAGCATGG
450 AGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGG
* **
11930240 -ATGTTCGAAAAATAGCTTGAAGGAATGGATCGTCACGAATACTTTAAGGAACTGAAGTTATAAA
515 AATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAA
* * *
11930304 ACAACTCTTAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATACA
580 AGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATACA
* * * ** *
11930361 ATTCTCATGTAAATAAGTTGTTAATTCGAAGACCAAAAGATGGTTACAAATGACAACCTATTTGG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
* * * * *
11930426 ACCAAATGATGCGATTTCCCGAGCATGGAATGTTCTAAAAATAGCTTGAAGGAATGGATCATCGT
66 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCTT
* * *
11930491 AAATACTTTAAGGAA-C-------TAAAAGAAGTCGTAAAAGTTTGACATGTTC----G-TC-CA
131 GAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCTCA
* * * *
11930542 A-GAACCAAGAGAGATACAATTCTCATGTAAATTAGTTTTTAATTCAAAGACCAAAAGCTAGT-T
196 AGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTGT
* *
11930605 AC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTC--G-A-GGAATGCTCG-GTAAATA
260 ACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAG-AAAT-
* * * * * * *
11930664 G-CTCGAAGGAATGGATCCTCTTGAATACTTTAAGGAATCGAAGTTACAAAAGAACTCGTAAAAG
321 GTCTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAAAA
*
11930728 TTTGACAAGTTCGGAAGTTCGTCAAAGAACCATGAGAGATA-ATATTCTCACATAAATAAGTTTT
386 TTTGACAAGTTC----G-TC--C-AAGAACCAAGAGAGATACA-ATTCTCACATAAATAAGTTTT
* * ** ** *
11930792 TAATTCAAAGACC-AAAGATA-TTTACAAAATGACAAACAATTTAGACCAAATGATATGACATCC
442 TAATTCAAAGACCAAAAG-TAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCT
* ** * ** * * *
11930855 CGAGCAAGGAATGTTTGGGAAAT-GTCTCGATA-GAAAAGATTGTGTTCAATACTTTAAGGAAC-
506 CGAGCATGGAATGTTTGAAAAATAG-CTTGA-AGGAATGGATCGTCTTGAATACTTTAAGGAACT
* * * *
11930917 GAAGTTATGAAAGAACTCGTAAAAGTTTG---A----C-AAGTTCATCCTAGAAGCAACAGAGAT
569 GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGAT
11930974 ACA
634 ACA
* * * * *
11930977 ATTCTCACATAAATAAGTTTTTAATTCAAACACCAAAAGTAGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * * *
11931042 GACCAAATGATGCGATTTCTTGAGCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCGTCT
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCT
** * *
11931107 TGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCTTAAAAGTTTGACAAGTTCCAAAGTTCGA
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC--
* * *
11931172 CCAA-GAA-CA-GAGAGATACCAATTCTCATGTAAATAAGTTTTTAATTTAAAGACCAAAAGTTG
193 TCAAGGAACCAGGAGAGATA-CAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* ** * * * * * * *
11931234 -GTTAC-AAATGGCAGCCTATTTGGACCAAGTGATGCAATTTTTCGAGCATGGAATGCTCAAAAA
257 TG-TACAAAATGACA-AATATTTGGACCAAATGATGCGA-CTTCCGAGCATGGAATGTTCGAGAA
* * * *
11931297 AT-TGCTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACC-AAGTTATAAAAGAACTCATAA
319 ATGT-CTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAA
* * * * * ** * * *
11931360 AATTTTGACCA-TT--T-C-AGAATTC--GACA-A-AGAA----C-CA-GGA-GAGATTAT-ATT
383 AAATTTGACAAGTTCGTCCAAGAA-CCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATT
* * * * * * **
11931408 CAAAGACCAAAAGTTGTTTAAAAAATTACAAACTATATGGATCAAATGAAGCAATGAAGCGATCT
447 CAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGC---G-A--TTTCT
* * * ** * * * * * *
11931473 TGTGCATGGAATGTTCGGGAAAT-GTCTCGAAGTAAAGGATCATGTTGAATACTTTAA-GAACAG
506 CGAGCATGGAATGTTTGAAAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTG
* * ** * *
11931536 AAGTCATAAACA-AACTCGTAAAAGTTTGACAA--T------TTCATCCAAGAAGCATCAAAAAT
570 AAGTTATAAA-AGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGAT
11931592 ACA
634 ACA
* * * * * * *
11931595 ATTATCACGTAATTAAGTTTTTAATTCAAAGACAAAAAGTAGTTTACAAAATGACATACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * * * * * ** *
11931660 GACCAAATGAAGCAATTTCT-GTGCATGGAATGTTCGATAAAT-GTCTCGAAAGAAAGGATTGTG
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAG-CTCGAAGGAATGGATCATC
* * *
11931723 TTAAATACTTTAAGGAACCGAAGTTATAAAACAACTCGTAAAAGTTTGACAAGTTC---A--TC-
129 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCT
* * * * *
11931782 CTA-GAACCAAGAGAGATACAATTTCTCACATAAATAAGTTTTTAATTCAAACACCAAAAGTAGT
194 CAAGGAACCAGGAGAGATACAA-TTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * * * *
11931846 TTATAAAATGACAAACTATTTGAACCAAATGATGTGATTTCTCGAGCATGGAATGTTCGAGAAAT
258 GTACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAGAAAT
** * * * * *
11931911 AG-CTTGAAGGAATGGATCATCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCTTAAAA
321 -GTCTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAAA
* * * * **
11931975 GTTTGACAAGTTCCAAAGTTGGACGAAGGACAAAGAGAGATACAATTCTCATGTAAATAAGTTTT
385 ATTTGACAAGTT-C---G-T---CCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTT
* * *
11932040 TAATTCAAAGACC-AAAGCT-GGTTAC-AAATGACAACCTATTTGGA-CAAGTGATGCGATTTCT
442 TAATTCAAAGACCAAAAG-TAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCT
* * * * ** *
11932101 TGAGCATGGAATGCTCGAAAAATTGCACGAAGGAATGGATCGTCTTGAATACTTTAAGGAACCGA
506 CGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGA
* * * * * ** * *
11932166 TGTTATAAAAGAACTCATAAAAGTTTGACCATTTCGAAAGTTTGTCAAAGAACCAGGAGAGATTA
571 AGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGA-TA
*
11932231 -T
635 CA
* * * * * *
11932232 ACTCTCACGTAAATAAGTTTTTAATTCAAAGACAAAAAGTAGTTTACAAAATGACATACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * * * *
11932297 GACCAAATGAAGCGATTTC-CTGTGCAAGGAATGTTC-AGGAAAT-GTCTCGAAGGAAAGGATCA
65 GACCAAATGATGCGATTTCTC-GAGCATGGAATGCTCGA-AAAATAG-CTCGAAGGAATGGATCA
* * *
11932359 TGTTGAATAC-TTAAGGAA-CAGAAGTTATAAAAGAACTTGTAAAAGATTGACAAGTTC---A--
127 TCTTGAATACTTTAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGT
* * * **
11932417 TC-CAA-GAACCA--TGAGATACAAGTC-CACGTAAATAAGTTTTTAATTTAAAGACTGAAAGTT
191 TCTCAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* ** * * *
11932477 GTTTACAAAATGACAAACTATACGGACCAAATGA-ACTGATTTCCTGTGCATGGAATGTTCTG-G
256 GTGTACAAAATGACAAA-TATTTGGACCAAATGATGC-GACTTCC-GAGCATGGAATGTTC-GAG
* * * * * *
11932540 AAATGTCTCGAAGGAAA-GGATCGTGTTGAATACTTTAAGGAACAGAAGTTCTAAAAAGAATTCG
317 AAATGTCTC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTAT-AAAAGAACTCG
* * * * * *
11932604 TAAAAGTTTGACAAGTTCGTCTAAGACCCATGAGAGATACAATAAC-CACGTAAATAAGTTTTTA
380 TAAAAATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAAT-TCTCACATAAATAAGTTTTTA
* * * * *
11932668 ATTTAAAGACCAAAAGTTGTTTACAAAATGACAAAACTATTAGGACCAAATGAAGCAATTTCTCG
444 ATTCAAAGACCAAAAGTAGTTTACAAAATGAC-AAACTATTTGGACCAAATGATGCGATTTCTCG
* * * * * *
11932733 AGCATGGAATG-TTCAGAAAATAGCTCGAAGGAAAGGAAT-GTCTTCAATACTTTAAGGAACCGG
508 AGCATGGAATGTTTGA-AAAATAGCTTGAAGGAATGG-ATCGTCTTGAATACTTTAAGGAACTGA
** ** * *
11932796 AGTTATAAAAGAACTCACAAGTGTTTGAAAAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGATA
571 AGTTATAAAAGAACTCGTAAAAGTTTG-ACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATA
11932861 CA
635 CA
** * * * * *
11932863 ATTCTCTTGTAAATATGTTTTTAACTCAAAGACCAAAAGC-TAGTTACAAATTACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGGTTACAAATGACAAACTATTTG
* * * * * * * *
11932927 GACAAAATGGTGCTATTTCTCAAGCATGGAATGGTCAAAAAATTGCTCGATGGAATGGATCATCT
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCT
* * * *
11932992 TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TTGACAAGTTTGGAAGTTTGT
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAG-TTCT
* * * * * *
11933056 CAAAGAACTATGAGAGATA-ATATTCTCACATAAATAAG-TTTTGATTCAAAGACCAAAAGATGT
194 CAAGGAACCAGGAGAGATACA-ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * *
11933119 TTACAAAATGACATTACA-ATTTAGACCAAATGATGCGACTTCCCGAGCATGGAATGTTCGGGAA
258 GTACAAAATGACA--A-ATATTTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAGAA
* * * * *
11933183 ATGTCTCGAAGGAAA-GGATTGTCGTGAATACTTTAAGGAACCGAAGTTATAAAAGAAGTCGTAA
319 ATGTCTC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAA
* * * *
11933247 AAGTTTGACAAGTTCGTCCTAA-AACGAAGAGAGATACAATTCTCTCCT-AATAAGTTTTTTAAT
383 AAATTTGACAAGTTCGTCC-AAGAACCAAGAGAGATACAATTCTCACATAAATAAG-TTTTTAAT
* * *
11933310 TCAAAGACCAAAAGTAG-TTACAAAATGACAAACTATTTGGACTAAATGATTCAATTTCTCGAGC
446 TCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGC
* * *
11933374 ATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTAAAGTTA
511 ATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTA
* * * *
11933439 TAAAATAACTCTTAAAACTTTGACAAGTTCCAAAGTTCGA-CCAATAACCAAGAGAGATACA
576 TAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTC-ATCCAAGAACCAAGAGAGATACA
* * *
11933500 ATTCTCATGTAAATAAGTTTTTAATTTAAAGACCAAAAGC-TGG-TACAAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGGTTACAAATGACAAACTATTTG
* * * * * * *
11933563 GACCAAGTGATGCAATTTCACGAGCATGGAATGCTCAAAAAATTGCTCGTAGGAATGGATCGTCT
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCT
* * * *
11933628 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACCATTTCGGAAG-TCGA
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-T
* * * *
11933692 AAAAGAACCAGGAGAGACTA-TATTCTCACATAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
194 CAAGGAACCAGGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * * * *
11933756 TTACAAAATGACAAACTA-TTGGACTAAATGATTCGATTTCTCGAGCATGGATTGTTCGAGAAAA
258 GTACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAG-AAA
** * * * * *
11933820 TAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGGACTGAAGTTATAAAAGAACTCTTAAA
320 T-GTCTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAA
* * **
11933884 AGTTTGACAAGTTTCAAAGTTCAACCAAAAACCAAGAGAGATACAATTCTCATGTAAATAAGTTT
384 AATTTGACAAG-TTC---G-T---CCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTT
* * * ** * *
11933949 TTAATTCAAAGACCAAAACCT-GGTTAC-AAATGACAACCTGCTCGGACCAAGTGATGCGATTTC
441 TTAATTCAAAGACCAAAA-GTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
* * * * *
11934012 TCGAGCATGGAATGCTCGAAAAATTGCTCGAA-GATACGGATCGTCTTGAATACTTTAAGGAAC-
505 TCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGA-ATGGATCGTCTTGAATACTTTAAGGAACT
* * ** * * *
11934075 GAAGTTATAAAAGAACTCGTAAAATTTTGACCA-TTTTAGAAGTTCGTCAAAGAACCAGGAGAGA
569 GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCA-AAGTTCATCCAAGAACCAAGAGAGA
*
11934139 TTA-T
633 -TACA
* * *
11934143 ATTCTCACGTAAATAAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTT
1 ATTCTCACGTAAAT-AAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTT
* * * * * * *
11934208 GGACCCAAATGATGCGACTTC-CGAGCATGGAATGTTTGAGAAAT-GTCTCGAAAGAAAGGATCG
64 GGA-CCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAG-CTCGAAGGAATGGATCA
*
11934271 TGTTGAATACTTTAAGGAACCAAAGTTAATAAAAGAACTCGTAAAAGTTTGACAAGTTC----G-
127 TCTTGAATACTTTAAGGAACCAAAGTT-ATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGT
* ** * * ** * *
11934331 TC-CTA-GAACCAAAAGAGATATAATTATCATATATATAAAGTCTTTAATTCAAAGACCAAAAGT
191 TCTCAAGGAACCAGGAGAGATACAATTCTCACGTAAAT-AAGTTTTTAATTCAAAGACCAAAAGT
* * * * * *
11934394 AGTTTACAAAATGACAAATTATTTGGACCAAATGATACGATTTCTCGA-CTATGGATTATTCGAG
255 TGTGTACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTC-CGAGC-ATGGAATGTTCGAG
** * * * *** ** * *
11934458 AAATAG-CTTGAAGGAATGGATCATCTTGAATACTTTAAGGATTTGATACGAAACGAAAGTGGAA
317 AAAT-GTCTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGA-A-GTTA-TAAA--AGAA
*** * * * * * * * * ** *
11934522 GAGGATCATAAAGTTGTCAAGTCGTGGATCTACCCTAA-AGCTCTAGACAAATGTAA-TCTGAAA
376 CTCG-T-AAAAATTTGACAAGT--TCG---T--CC-AAGAAC-CAAGAGAGATACAATTCT--CA
* ***** * * * * * **
11934585 CGA-AAACAAAGAAAGACAGATT-AATTGA-CAAGAAGAATA-ATT-CATAACG--AAATTAAAA
428 C-ATAAA-TAAG-TTTTTA-ATTCAA-AGACCAA-AAG--TAGTTTACAAAATGACAAACT-ATT
* * ** * ** * * *
11934643 TGAAACAAA-GATGAAATGGTTGGTAACG-G-ATCCAATAG--AGAATGAAATTAGGGTTCTGGA
484 TGGACCAAATGATGCGAT--TT-CT--CGAGCATGGAAT-GTTTGAA--AAA-TA--GCT-TGAA
* * * * * * * * * * * * **
11934703 TGAAAGAACCGTCATTG--GAC-CTCAGAAAACATCCCAACCAGATCTGGAAAATAAAAACACAC
537 GGAATGGATCGTC-TTGAATACTTTAAG-GAAC-T---GA--AG-T-T--ATAA-AAGAACTCGT
* ** ** * * ** **
11934765 AAACAGATTTGTTAGAAGTGATTTAAAAGATAAAAGCAAACTGTTTAGGCAAGA-ATGATTGA
589 AAA-AG-TTTG--ACAA--G-TTCCAAAG-T-TCATCCAA--G---AACCAAGAGA-GATACA
* * * * * ** *** ***** * * * * *
11934827 A-ACGGCAAGAAAATATTGGATCTCCTAATT-TTTGA-TGTTTCTTGATCGATCAGGGTAGGA-G
1 ATTC-TCACGTAAATA--AG-T-TTTTAATTCAAAGACCAAAACTTGGT-TA-CA---AATGACA
* * * * * ** ** * * * *
11934888 AACGTCCCTCTTGAAGCAAAT--T-C-A--ACT-TAG-AACGAAAACAACTAAATCAGTAAC-CG
56 AAC-T--AT-TTGGACCAAATGATGCGATTTCTCGAGCATGGAATGC-TCGAAA--AATAGCTCG
* * * * * * ** **
11934944 TAAACAGAAAGAAATAAAC-T-ATATCAAC-TT-A-GAACGATGGATTA-AAGATAGAA-AAG-A
114 --AA-GGAATG-GATCATCTTGA-AT--ACTTTAAGGAACCAAAG-TTATAA-A-AGAACTCGTA
* ** * * ** * ** * * * *
11935001 GAAGAAT-A-ACG-TCTAAGAG--C-CTTGGAAACAATATAGAATCCACAA--CTCCCTTCAAT-
169 AAAGTTTGACAAGTTCGAA-AGTTCTCAAGGAACCAGGAGAG-AT--ACAATTCTCACGTAAATA
* *** * * * * *
11935057 GGCTCTAATTTCCCCTCCAAGA--AAGAGATCT-TG-GC--AA-GA-AAA-AGCTT-GA--AGAT
230 AG-T-T--TTT-AATTCAAAGACCAAAAG-T-TGTGTACAAAATGACAAATA-TTTGGACCAAAT
* * ** ** * ** * * ** * *
11935110 GATTCCCACAACCTGAAAAATTGTTAAAACAACTTCTAAAAAAATACTC-AAG--A-GCAATCTT
287 GA-TGCGACTTCC-G-AGCA-TG----GA-ATGTTCGAGAAATGT-CTCAAAGAAATG-GATCGT
*** * *** ** * * * **
11935171 GAAGAAAGACTCA-AAGAGAA-TTTA-TTATAACCAA-AA-TAATCAAAA--T-CCAGTGTTTTT
341 CTTG-AATACT-ATAAG-GAACCGAAGTTATAA--AAGAACTCGTAAAAATTTGACA-AGTTCGT
* **** * * ** * **
11935228 TCAAGGGGGAACGACCATGCTACTATAGGCCTC-CA-AAATAAGCTTTCCTAACCCTAATAGAAT
400 CCAAGAACCAA-GA-GA-GATAC-A-A-TTCTCACATAAATAAG-TTT-TTAATTC-AA-AG-A-
* * * * * * ** **** * * ** ** * * *
11935291 TCTAACCATTACAGCTAATC-AAAT-AAAATAAAATAAAAACAAAATAAAT-TTAAGTGTGGA-T
453 -CCAA-AAGT--AGTTTA-CAAAATGACAA-ACTATTTGGACCAAAT-GATGCGATTTCTCGAGC
* * *** ** ** ** * * * * * **
11935352 ATGAGGAT-TTCGGCCAAGGGCTTTGAATGGGCT-CCTTGGC-TGAATTC-TTACATGATAATCC
511 ATG-GAATGTTTGAAAAATAGC-TTGAA-GGAATGGATCGTCTTGAATACTTTA-AGGA-ACTGA
* * * * * ** * ** * ** * **
11935413 ACTTATTAAAATAAAAATTGGACCTAAAGTTAAATACTTTCC-AATTTGGGCCACTTTAATAATT
571 AGTTA-T-AAA-AGAACTCGTA---AAAGTTTGACAAGTTCCAAAGTT----CA-TCCAAGAACC
* ***
11935477 TAGCCTGAT---
625 AAGAGAGATACA
** * * * ** * * **
11935486 A-T-TCAATTAAATTACTTTCTAAACTTC-AAGA--TGAACTT-G-TAGAATATTA-ATGGGCCT
1 ATTCTCACGTAAATAAGTTT-TTAA-TTCAAAGACCAAAACTTGGTTACAA-ATGACA---AACT
* *** * * * * * *
11935543 TTTTGCAAGAACTTGGTCTTGTGATCCG-TTTGCTCTTGA-AATTGACTCATTCAAGGTCGTACA
60 ATTTG---G-AC-----CAAATGATGCGATTT-CTC--GAGCATGGA---A-T---GCTCGAAAA
* ** * ** * ** ** * ** *
11935606 AGAAATCCAATGTGCCTTGGCTGCAAGATTCGGTTTCTTTTTCAA-GAATTGAAATCTTGATTTT
106 ATAGCTCGAA-G-G-AATGGAT-C-ATCTT-GAATAC--TTT-AAGGAA-CCAAA----G-TTAT
**** * * * * * * *** **
11935670 TCTTG-ATTCTTGAAATGTTTGAAACAACATAATTGGACCAAGAT-TC--GGTTTCTTGATTTTC
156 AAAAGAACTCGT-AAAAGTTTG-----ACA-AGTTCGA--AAGTTCTCAAGGAACCAGGA-----
** * ***** ** ** * * * * *
11935731 TTGAT-CAATGTGCGCATC-T-AGGGCCTTGGTAA--CGTAGTCTTCGATAGTCT-TGTTCAATT
207 GAGATACAAT-T-CTCA-CGTAAATAAGTTTTTAATTCAAAGAC--CAAAAGT-TGTGTACAA-A
* * *** *** * **
11935790 TTG-CTTAAATTTGCTTGG--CTTTTGACCT-CG--TTATTAGTCTTGAGGAA-GATT-GAGCCC
265 ATGAC--AAATAT--TTGGACCAAATGA--TGCGACTTCCGAG-CAT--GGAATG-TTCGAG-AA
* * * * * * * *
11935847 ATCG-CGTTCATACG--CTGGATTTTGGGTCCTACGACT-CGTATCA-GAACTGAAGTTACAAAA
319 AT-GTC--TCA-AAGAAATGGA---T-CGT-CT-TGAATAC-TATAAGGAACCGAAGTTATAAAA
* * * * * **
11935907 TAACTC-T-AAAGTTTAACAAGTTCCAAAGTTCGACCAAGAACCAACAGACATACAATTCTCATG
373 GAACTCGTAAAAATTTGACAAGTT-C---G-T---CCAAGAACCAAGAGAGATACAATTCTCACA
* * * *
11935970 GAAATAAGTTTTTAATTCAAAGACCAAAAGCT-GGTTAC-AAATGACAACCTATTTGGACCAAGT
430 TAAATAAGTTTTTAATTCAAAGACCAAAAG-TAGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * * *
11936033 GAAGTGATTTCTCTAGCATGGAATGCTCGAAAAATTA-CTCGAAGAAATGGATCGTCTTGAATAC
494 GATGCGATTTCTCGAGCATGGAATGTTTGAAAAA-TAGCTTGAAGGAATGGATCGTCTTGAATAC
* * * * * * *
11936097 TTTAAGGAAATCAAAGTTTATAAAAGAAATCGTAAAAGTTTGACCA-TTTCAGAAGTTCGTCAAA
558 TTTAAGGAACT-GAAG-TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCA-AAGTTCATCCAA
* *
11936161 GAACCAGGAGAGAT--T
620 GAACCAAGAGAGATACA
* * * *
11936176 ATTCTCACATAAATAAGTTTTTAATTCAAAGACC-AAAGTTGTTTACAAAATGACAAACAATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * * * * ** * *
11936240 GCCCAAATGATGTGACTTCTCGAGCATGGAATGTTCGAGAAAT-GTCTCGAAAGAAAAGATCGTG
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAG-CTCGAAGGAATGGATCATC
* * *
11936304 TGTGGAATACTTTAAGGAAACGAAGTTATAAAA-AAGCTTGTAAAAGTTTGACAAGTTC----G-
129 T-T-GAATACTTTAAGGAACCAAAGTTATAAAAGAA-CTCGTAAAAGTTTGACAAGTTCGAAAGT
** * * * *
11936363 TC-C-TTGAA-CAAGAGAGATTA-ATTTCTCACATAAATAAG-TTTTAATTCAAAGACAAAAAGT
191 TCTCAAGGAACCAGGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT
* * * * *
11936423 AGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCAAAA
255 TGTGTACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAGA
** * *
11936488 AATAG-CTTGAAGGAATGGATCGTGC-TGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGT
318 AAT-GTCTCAAAGAAATGGATCGT-CTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGT
* * * * *
11936551 AAAAGTTTAACAA-TTCGTCCTAGAACCAAGAGGGATACAATTCTCACATAAATAAGCTTTTAAT
381 AAAAATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAAT
*
11936615 TCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCAATTTCTCGAGC
446 TCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGC
* * * *
11936680 ATGGATTGTTCGAGAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGAAACTGAAGTTA
511 ATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTA
* * *
11936745 TAAAAGAACTCTTAAAAGTTTGACAAGTTTCAAAGTTCGA-CCAAGAACCAAGAGAGCTACA
576 TAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTC-ATCCAAGAACCAAGAGAGATACA
* *
11936806 ATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGC-TGGTTACAAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGGTTACAAATGACAAACTATTTG
** *
11936870 GACC-AATGATAAGA--T-TCGAGCATGGAATGCTCGAAAAAATTGCTCGAAGGAATGGATCATC
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCG-AAAAATAGCTCGAAGGAATGGATCATC
* * *
11936931 TTGAATAC-TTAAGAAACCAAAGTTATAAAAAGAACTCGTAAAAATTTGACAAGTTCTAAAGTTC
129 TTGAATACTTTAAGGAACCAAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC
* * *
11936995 GTCCTA-GAACCAGGAGAGATACAATTCACACGTAAATAAGTTTTTAATTCAATGACCAAAAGTT
193 -T-CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* *
11937059 GTTTACAAAATGACGAAATATTTGGACCAAATGATGCGAC-TCCAGAGCATGGAATGTTCGGGAA
256 GTGTACAAAATGAC-AAATATTTGGACCAAATGATGCGACTTCC-GAGCATGGAATGTTCGAGAA
* * * *
11937123 AT-TCTTCGAAAGAAA-GAATCGTGTTGAATACTTTAA-GAACCGAAGTTATAAAATAACTCGTA
319 ATGTC-TC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTA
* *
11937185 AAAGTTTGACAAGTTCGTCCTAGAACCAAG-GAGATACACATTCTCACATAAATAAGTTTTTAAT
382 AAAATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACA-ATTCTCACATAAATAAGTTTTTAAT
* * *
11937249 TCAAAGACCAAAAGTAGTTTATAAAATGATAAACTATTTGGACCAAATGATGCAATTTCTCGAGC
446 TCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGC
** * *
11937314 ATGGAATGTTCAAAAAATAGCTTGACGGAATGGATCATCTTGAATACTTTAAGGAACTGAAG-TA
511 ATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTA
* * *
11937378 TAAAAAAACTTGTAAAAGTTTGACAAGTTCCAAAGTTCAACCAAGAACCAAGAGAGATGA-A
576 TAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGAT-ACA
** * *
11937439 ATTCTCATTTAAATAAGTTTTTTATTCAAAGACCAAAAGC-TGGTTACAAATGACAACCTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGGTTACAAATGACAAACTATTTG
* * ** *
11937503 GGCCAAATGATACGATTTCTCGAGCATGGAATGCTCGAAAAATTTCTTGAAGGAATGGATCATCT
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCT
* * ** * *
11937568 TGAATACTTTAAGGAACCGATGTTATAAAAGAACTCGTAAAAAATTGACAAGTTCTAAATTTCAT
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-T
* * * * *
11937633 CCTA-GAACTAGGAGAGATACAATTCACACGTAAATAATTTTTTAATTCAATGACCAAAAGTTGT
194 -CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * *
11937697 TTACAAAATGATGAAATATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-ATGAAA
258 GTACAAAATGA-CAAATATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGA-GAAA
*** * * *
11937761 T-TGCTTTGTAGAAA-GGATCATCTTGAATACTATAACGAACCGAAGTTATAAAAGAAATCGTAA
320 TGT-C-TCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGT--
* *
11937824 AAGTTTAACAAGTTTGA-AAGTTCATCCAAGAACCAAGAGAGAAACAATTCTCA-ATTAAATAAG
381 -A----AA-AA-TTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACA-TAAATAAG
* * * *
11937887 TTTTTAATTTAAAGACCAAAATTTA-TTTACAAAA-GACCAACTATTTGGACCAAATGATGCAAT
438 TTTTTAATTCAAAGACCAAAA-GTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGAT
* * * * *** * *
11937950 TTC-CTGAG-ATGGAATGCTCGAAAAACT-CCTCGAAGGAATGGATAAACATGAATACTTCAAGG
502 TTCTC-GAGCATGGAATGTTTGAAAAA-TAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGG
* * *
11938012 AATTGAAGTTATAAAAAGAACTTGTAAAAGTTTG---A----C-AAGTTCATCCAAGAAACAAGA
565 AACTGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGA
11938069 GAGATACA
629 GAGATACA
** * *
11938077 ATTCTCATTTAAATAAGTTTTTAATTCGAAGACCAAAAGCTT-TTTACAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGGTTACAAATGACAAACTATTTG
* * ** * *
11938141 TACCAAATGATGCCATTTCTTAAGCATGGAATGCTTGAAAAATAGCTCGATGGAATGGATCATCT
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCT
** *
11938206 TGAATA-TTTAAGGAACTGAAGTTATAAAAGAACTCGTTAAAAGTTCGACAAGTTCGAAAGTTCA
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCG-TAAAAGTTTGACAAGTTCGAAAGTTC-
** * *
11938270 TCCAA-GAACTGGGAGAGATACAGTTCTCACGTAAATAAGTTTTTAAATCAAAGACCAAAAGTTG
193 T-CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
** * * *
11938334 CATACAAAATGACAAACTATTTGGACCAAATGATGCGATTTTTTCGACCATGGAATGTTCGAGAA
257 TGTACAAAATGACAAA-TATTTGGACCAAATGATGCGA--CTTCCGAGCATGGAATGTTCGAGAA
* * * *
11938399 ATGTCTCGAAAGAAA-GGATCGTCTTAAATACTTTAAGGAACTGAAGTTATAAACGAACTCGTAA
319 ATGTCTC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAA
* * *
11938463 AAGTTTGACAAGTTCATCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTATTTAATTC
383 AAATTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTC
* *
11938528 AAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACAAAATGATGCGATTTCTCGAGCAT
448 AAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCAT
** ** * * *
11938593 GGAATGTTCAAAAAATAGCTCAAAAGAATGGATCGTCTTGAATACTTTAAGGAACTAAATTTATA
513 GGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATA
* * *
11938658 AAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAAGCAAGAGAGATACA
578 AAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATACA
* *
11938717 ATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGGTTACAAATGACAAACTATTTGG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
* * * * * * * * * **
11938782 ACCAGATGATGTGACTTCTCGAGCATGGATTTCTCAAAAAATAGCTAGAATGATTGGATTGTCTT
66 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCTT
* * *
11938847 GAATACTTTAAGGAACTAAAGTTATAGAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTTATC
131 GAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAG-TTCT-
* *
11938912 CAA-GAACC-GAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAAACC-AAAGTTG-
194 CAAGGAACCAG-GAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * * *
11938973 GTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTTGAGAATGGAATGCTCG-GAAA
258 G-TACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAG-AA
* * * * * *
11939036 ATAG-CTCTAAGGAATCGATCATCTTGAAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTT
319 AT-GTCTCAAAGAAATGGATCGTCTTG-AATACTATAAGGAACCGAAGTTATAAAAGAACTCG-T
* * * * * *
11939100 AAAGTTTAACAAGTTTGA-ATGTTCGTCCAAGGAGCAGGAGAGATACAATTCTCTCGTAAATAAG
381 --A----AA-AA-TTTGACAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAG
* * * *
11939164 TTTTTAACTCCAAGACCAAAAGTTGTTTACAAAATGATAAACTATTTGGACCAAATGATGCGATT
438 TTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATT
* ** * *
11939229 TCTCGAGCATGGAATGTTCGGGAAAT-GCCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAA
503 TCTCGAGCATGGAATGTTTGAAAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAA
* *
11939293 CTGAAGTTATAAAAGAACTCATATAAGTTTGACAAGTT-C---G----TCCAAGAACCAAGAGAG
567 CTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAG
11939350 ATACA
632 ATACA
* *
11939355 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATAACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * * * * * * **
11939420 GACCAAATAATGCGATTTCCCAAGCATGGAATGTTCGAGAAATTGCTCAAAGGAAAGGATTGTCT
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCT
* ** * * *
11939485 TGAATACTTTCAGGAACTGAAGTTATAAAAGAACTTGTTAAAGTTTGACAAGTTC----G-T-GC
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCTC
* * * * * *
11939544 AA-GAACCAGGAGAGATACAATTCTCATGCAAATAAGTTTTAAATTGAAAGACCAAAATTTGTTT
195 AAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTGT
* * * * * *
11939608 AC--AA-GACAAAATATTTGGATCAAATTATGCGATTTTCGAGCTTGGAATGTTCGTGAAAT-TA
260 ACAAAATGAC-AAATATTTGGACCAAATGATGCGACTTCCGAGCATGGAATGTTCGAGAAATGT-
* * ** * ** * *
11939669 CTCGAAGGAAA-GGATCATCTAAAATACTTTAAGGAACTAAAGTTAGAAAAGAACTCGTAAAACT
323 CTC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAAAAT
* *
11939733 TTGACAAGTTCAGAAGTTCGTCCACGAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTT-
387 TTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTA
* * * * * * *
11939797 ATTCGAAGACCAAAA-AATTATTATAAAATGACAAACTATTTGAACCAAATGATGCAATTTCTTG
444 ATTCAAAGACCAAAAGTAGT-TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCG
* ** * * * * * * *
11939861 AGCATGGAATGTTCGGGAAAT-GTCTCGATGGAAAGGGTAGACTTGAATACTTTTAGGAA-TCGA
508 AGCATGGAATGTTTGAAAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACT-GA
* * *
11939924 AGTTATAAAAGAACTCATAAAAGTTT-A-AAATT------TTCGA-CCAGGAACCAAGAGAGATA
571 AGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTC-ATCCAAGAACCAAGAGAGATA
*
11939980 CT
635 CA
* ** * *
11939982 ATTCTCACATAAATAAGTTTTTAATTCAAAGACCAAATTTTGATTTC--ATGACAAACTATTTGG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
* * * * * * *
11940045 ACCAAATAATGCGATTTCTTGAGCATGGAATGTTC-ATGAAATTGCTCAAAGG-ATGGGATCGTC
66 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGA-AAAATAGCTCGAAGGAAT-GGATCATC
* * *
11940108 TTGAATACTTTAAGGAACCGATGTTATAAAAGAACTTGTAAAAGTTTGAC-AGTTCTG-AAGTTC
129 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC-GAAAGTTC
** * * ** *
11940171 ATCCAA-GAACCAAAAGAGAAACAATTCTTAATTAAATAAGTTTTTAATTGAAAGACCAAAAGTT
193 -T-CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* * * * * * * *
11940235 GTTTAC-AAATGAAAAACTATTTGGACCAGATAATGC-AATATCCCGAGCTTGGAATG--CTAAA
256 GTGTACAAAATGACAAA-TATTTGGACCAAATGATGCGACT-T-CCGAGCATGGAATGTTCGAGA
** * * * * * * *
11940296 AAT-TCCTTGAAGGAATGGATCATCATAAATACTTTAAGGAATCGAAGTTATAAAATAACTCGTA
318 AATGT-CTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTA
* * **
11940360 AAAGTTTGACAAGTTCGAAAGTTCGTCCAAAAACCAAGAGAGATACAATTCTCATGTAAATAAGT
382 AAAATTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGT
* * * *
11940425 TTTTAATTCAAAGATCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAATGATGC-AATT
439 TTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTT
* ** * ** *
11940488 CTCGAGCATGGAATGCTCCAAAAATAGATCAAAGGAATGG---GTCTTAAATACTTTAAGGAACT
504 CTCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACT
* * * ** * *
11940550 GGAGTTGTAAAAGAACTCGTAAAAG-TTGACATGTTCTGAAGTTCGTCCAAGAACCAAGAGAGAA
569 GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGAT
11940614 ACA
634 ACA
* ** * * *
11940617 ATTCTTAATTAAATAAG-TTTTAATTTAAAGACCAAAAGTTGTTTACAAATGACAAACTATTTGG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
* * * * ** * *
11940681 ACCAGATAATGTGATTTCCCGAGCATGGAATGCTCGAAAAATTCCTTGAAGGAATGGATCATCAT
66 ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCTT
* * * *
11940746 AAATACTTTAAGGAACCGAAGTTATAAAATAACTCGTAAAAGTTTGACAAGTT-GGAAGTTCGTC
131 GAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-TC
* * * * *
11940810 TAA-AAACCAAGAGAGATACAGTTCTCATGTAAATAAGTTTTTAATTCAAAAACCAAAAGTTG-G
195 -AAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTG
* *
11940873 TTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGCTCCGA-AAA
259 -TACAAAATGACAAA-TATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATG-TTCGAGAAA
* * * *
11940936 TAG-CTCGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACTCGTAAA
320 T-GTCTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAA
* * ** *
11941000 AGTTTGACAAGTTCGAAAGTTCATCCAAGAACCAAGAGAGTTACAATTCTCATGTAAAATAAGTA
384 AATTTGACAAGTTC----G----TCCAAGAACCAAGAGAGATACAATTCTCACAT-AAATAAGTT
* *
11941065 TTTAATTCAAAGACCAAATGTTGTTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTTC
440 TTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTC
* * * * * *
11941129 TCGAGCATGGAATGCTAGAAAAATAGGTTGAAGAAATGGATCGTCTTGAATACTTTATGGAACCG
505 TCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTG
*
11941194 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGATT--AGAAGTTCATCCAAGAA-CTAGAAGAG
570 AAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTCCA-AAGTTCATCCAAGAACCAAG-AGAG
*
11941256 ATATA
632 ATACA
* * *
11941261 ATTCTCACGTAAATAAG-TTTTAATTGAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * * ** * ** *
11941325 GACCAAATGATGCGATTTCCCGAGTATGGAATGTTTG-GGAATTGTCTCGAAGGAAACGATCGTC
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAG-CTCGAAGGAATGGATCATC
* *** * *
11941389 TTGAATACATTAAGGAATTGAAGTTATAAAAGAACTCATAACAA-TTTTACAAGTTC---A--TC
129 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGAAAGTTC
* * * * *
11941448 -CAA-GAAACAAGAGAGATACAATTCTCACATAAATAAGTTTTAAATTCAAAGACCAAAAGTTAT
193 TCAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * *
11941511 -TCACAAAATGACAAATCATTTGGACCAAATGATGCGATTTCTTGAGCATGGAATGTTTG-GAAA
258 GT-ACAAAATGACAAAT-ATTTGGACCAAATGATGCGACTTC-CGAGCATGGAATGTTCGAG-AA
* * * ** *
11941574 ATAG-CTCGAATG-AATGGATTGTCTTGAATACTTTAAGGAATTGAAGTTATAACAGAACTCGTA
319 AT-GTCTC-AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTA
* *
11941637 AAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTCA-ATTAAATAAG
382 AAAATTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACA-TAAATAAG
** * * *
11941701 TTTTTAATTTGAAGACCAAAAGTTGTTTAC-AAATGACAAACTACTTGGACCAGATGATGCGATT
438 TTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATT
* * * ** * * *
11941765 TCCCGAGCATGGAATGCTCGAAAAATTCCTCGAAGGAATGGATCATCATGAATACTTTAAGACGA
503 TCTCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAG--GA
* * * * ** *
11941830 AC-GAAGATATAAAATAACTCGTAAAAG-TT--C-GGTT-----GTTCGTCCAAGAATGAAAAGA
566 ACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGA
* *
11941885 GAAATA
631 GATACA
* * * * * ** * *
11941891 ATTTTGACGTAACTAAGATTTTAATTCCAAGATGAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * * *
11941956 GACCAATTGATGCGATTTCTCGAGCATGGAATGATCG-AAAATAACTCGAAGGCATGGATCGTCT
65 GACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCT
* * * * *
11942020 TGAATACTTTAAGAAAACGAAGTTATAAAAGAACTTGTAAAAGTTTGACAAGTTCAAAAGTTCAT
130 TGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-T
** * * * * *
11942085 CCAA-GAACCAAAAGAGAGACAATTATGACGTAAATAAGTTTTTAATTCAAAGATCGAAAGTTGT
194 -CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGT
* * * * *
11942149 TTACAAAATTACAAACTATATTGGACCAAATGGTGTGATTTCCCGAGCATGGAATGTTC-AGAAA
258 GTACAAAATGACAAA-TAT-TTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAG-AA
** * * * * *
11942213 AT-TGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGCAACCAAATTTATAAAAGAACTCGTAA
319 ATGT-CTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAA
* * * *
11942277 AAGTTTGACAAGTTTGAAAGTTCGTCCAAGAACCAGGAGAGACACAATTCTCACGTAAATAAG-T
383 AAATTTGAC--------AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTT
* *
11942341 TTTAATTCAATGACCAAAAGTTA-TTTACCAAATGACAAACTATTTGGACCAAATGATGCGATTT
440 TTTAATTCAAAGACCAAAAG-TAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTT
* * * * * * *
11942405 CCCGA-TATTTGAATGTTTGGAAAAT-GTCTCGAAGGAAAGGATCGTGTTGAATACTTTAAGGAA
504 CTCGAGCA-TGGAATGTTTGAAAAATAG-CTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAA
*
11942468 CCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C---G----TCCAAGAA-CAATGAGA
567 CTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAA-GAGA
11942524 GATACA
631 GATACA
* *
11942530 ATTCTCACATAAATAAGTTTTTAATTCAAAGACCAAAAGC-TGTTTACAAAATGACAAACTATTT
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA-CTTGGTTAC-AAATGACAAACTATTT
* * * * * ** * * * *
11942594 GGACCAAATAATGTGAATTCCCGAGCATGCAAT-CTTTAGGAAATTGCTCGAAGGAAAGG-TCGT
64 GGACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGA-AAAATAGCTCGAAGGAATGGATCAT
* * * * *
11942657 CTTGAATACTTTAAGGAACCGAAGTTATAAATGAACTCGTAAAAGTTTGGCAAGTTTGGAAGTTC
128 CTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC
* * * *
11942722 GTCCAA-GAACCAAGAGAGATACGATTCTCACGTAAATAAGGTTTTAATTCGAAGACCAAAAGTT
193 -T-CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* * * * * * *
11942786 GTTTACAAAATGACAAACTATTTGGACCAAATGATGTGATTTCCCGAGCATCGAATGCTCGTGCA
256 GTGTACAAAATGACAAA-TATTTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAGAA
** * *
11942851 AT-TGCTTGAAGAAAAGGATCGTCTTGAATATTATTTATA-GAACCGAAGTTATAAAAGAACTCG
319 ATGT-CTCAAAGAAATGGATCGTCTTGAATACTA--TA-AGGAACCGAAGTTATAAAAGAACTCG
* * * **
11942914 TAAAAGTTTGACATGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACAATTCTTAGTTAAATAA
380 TAAAAATTTG--A----C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAA
* * * *
11942979 GTTTTTAATTTAAAGACCAAAAGTTGTTTAC-AAATGACAATCTATTTGGACCAGATGATGCGAT
437 GTTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGAT
* * ** ** * * *
11943043 TTCCCGAGCATGGAATGCTCAAAAAATTCCTAGAAGGAATGGATCATCATGAATACTTTAAGGAA
502 TTCTCGAGCATGGAATGTTTGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAA
* * * *** * **
11943108 CCGAAGATATAAAATAACTCGTAAAAGTTTGACAAGTTTGGATGTTTGTCCAAGAACCAA-AGAG
567 CTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAG
*
11943172 AAACA
632 ATACA
* * * * *
11943177 ATTTTGACGTAAAATAAGTTTTTAATTCAAAGACGAAAAGTTGTTTACAAAATGACAAACTATTT
1 ATTCTCACGT-AAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTT
* * * * *
11943242 GGACCAAATGATGCGATTTCTCAAGCATGGAATGTTCGGAAAATAACTCGAAGGAATGGATCGTC
64 GGACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATC
* * *
11943307 TTGAATACTTTAAGGAAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAAGTTCG
129 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-
** * * * * * *
11943372 TCCAA-GAACCAAAAGAGAGACAATTATGATGTAAATAAGTTTTAAATTCAAAGATCAAAAGTTG
193 T-CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * * *
11943436 TTTACAAAATGACAAACTATTTTGGACCAAATGGTGTGATTTCCCGAGCATGGAATGTTCGAAAA
257 TGTACAAAATGACAAA-TA-TTTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAGAA
* * * * * *
11943501 AT-TGCTCGAAGGAATGGATCATCTTGAATACTTTAAGGAATCGAATTTATAAAAGAACTCGTAA
319 ATGT-CTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAA
* * * * *
11943565 CAGTTTAACAAGTTCGGAAGTTCATCGAAGAACAAAGAGAGAAACAATTCTCACATAAATAAGTT
383 AAATTTGACAAGTTC----G-TC--C-AAGAACCAAGAGAGATACAATTCTCACATAAATAAGTT
* * * *
11943630 TTAAATTCAAAGACCAAAAGTTGTTTAAAAAATGACAAACTATTTTGGAACAAATGATGCGATTT
440 TTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTT
* * * * * * * *
11943695 CCCGATCATTGAACG-TTCAGAAAAT-G-TCTCAGAGGAGTGGATCATCTTGAATACTTTAAGGA
504 CTCGAGCATGGAATGTTTGA-AAAATAGCT-TGA-AGGAATGGATCGTCTTGAATACTTTAAGGA
* * * ** * * *
11943757 ACCGAATTTATAAAAGAACTCGTATAAGTTTGACAAGTTCGGAAGTTCGTCCAAAAACCAAAAGA
566 ACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGA
*
11943822 GAAACA
631 GATACA
* * * * *
11943828 ATTTTGACGTAAAATAAGTTTTTAATTCAAAGACGAAAAGTTGTTTACAAAATGACAAACTATTT
1 ATTCTCACGT-AAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTT
* * * * *
11943893 GGACCAAATGATGCGATTTCTCAAGCATGGAATGTTCGGAAAATAACTCGAAGGAATGGATCGTC
64 GGACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATC
* * *
11943958 TTGAATACTTTAAGGAAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAAGTTCG
129 TTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC-
** * * * * * *
11944023 TCCAA-GAACCAAAAGAGAGACAATTATGATGTAAATAAGTTTTAAATTCAAAGATCAAAAGTTG
193 T-CAAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG
* * * * *
11944087 TTTACAAAATGACAAACTATTTTGGACCAAATGGTGTGATTTCCCGAGCATGGAATGTTCGAAAA
257 TGTACAAAATGACAAA-TA-TTTGGACCAAATGATGCGACTT-CCGAGCATGGAATGTTCGAGAA
* * * * * *
11944152 AT-TGCTCGAAGGAATGGATCATCTTGAATACTTTAAGGAATCGAATTTATAAAAGAACTCGTAA
319 ATGT-CTCAAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAA
* * * * *
11944216 CAGTTTAACAAGTTCGGAAGTTCATCGAAGAACAAAGAGAGAAACAATTCTCACATAAATAAGTT
383 AAATTTGACAAGTTC----G-TC--C-AAGAACCAAGAGAGATACAATTCTCACATAAATAAGTT
* * * *
11944281 TTAAATTCAAAGACCAAAAGTTGTTTAAAAAATGACAAACTATTTTGGAACAAATGATGCGATTT
440 TTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTT
* * * * * * * *
11944346 CCCGATCATTGAACG-TTCAGAAAAT-G-TCTCAGAGGAGTGGATCATCTTGAATACTTTAAGGA
504 CTCGAGCATGGAATGTTTGA-AAAATAGCT-TGA-AGGAATGGATCGTCTTGAATACTTTAAGGA
* * * ** * * *
11944408 ACCGAATTTATAAAAGAACTCGTATAAGTTTGACAAGTTCGGAAGTTCGTCCAAAAACCAAAAGA
566 ACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGA
*
11944473 GAAACA
631 GATACA
* * * *
11944479 ATTTTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
1 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTAC-AAATGACAAACTATTTG
* * * ** * *
11944544 GACC-AATAGATGCGATTTC-CTGATCATGGAATGTTTGGGAAATTGCTCGAAGGAAAGGATCAT
65 GACCAAAT-GATGCGATTTCTC-GAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCAT
* * * *
11944607 CTTTAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTCGGAAGCTC
128 CTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTC
* * * * * *
11944672 GTCTAA-GAACCATGAGAGAAAGAATTCTCACTTAAATAAGTTTTTAATTTAAA-ACCAATAGTT
193 -TC-AAGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT
* * * * *
11944735 GTTTAC-AAATGACAAATTTTTTGGACCAAGTGATGCTG-TTTCCCGAGCATGGAATGTTCGAAA
256 GTGTACAAAATGACAAA-TATTTGGACCAAATGATGC-GACTT-CCGAGCATGGAATGTTCGAGA
* * * * * *
11944798 AAT-TGCTCGAAGGAATGGATCGTCATGAATACT-TGAAAGAACCAAAGTTATAAAAGAACTCAT
318 AATGT-CTCAAAGAAATGGATCGTCTTGAATACTAT-AAGGAACCGAAGTTATAAAAGAACTCGT
* * * * * * * *
11944861 GAAAGTTTGACAAGTTCAGAAGTTCGTCCAAGAACCAAAAGATAAACAATTTTGACGTAAATAAG
381 AAAAATTTG---A---C--AAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAG
*
11944926 -TTTTAATTCAAAGACC-AAA-T-GTTTACAAAATGACAAACTATTTTGGAACAAATTGATG
438 TTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTA-TTTGGACCAAA-TGATG
11944984 TGAGCTCGTC
Statistics
Matches: 17596, Mismatches: 3237, Indels: 3059
0.74 0.14 0.13
Matches are distributed among these distances:
609 5 0.00
610 5 0.00
611 61 0.00
612 121 0.01
613 86 0.00
614 194 0.01
615 31 0.00
616 109 0.01
617 182 0.01
618 178 0.01
619 72 0.00
620 26 0.00
621 14 0.00
622 10 0.00
623 9 0.00
624 216 0.01
625 271 0.02
626 78 0.00
627 337 0.02
628 387 0.02
629 605 0.03
630 1177 0.07
631 899 0.05
632 463 0.03
633 529 0.03
634 429 0.02
635 534 0.03
636 796 0.05
637 684 0.04
638 1681 0.10
639 1031 0.06
640 807 0.05
641 431 0.02
642 134 0.01
643 204 0.01
644 436 0.02
645 233 0.01
646 474 0.03
647 273 0.02
648 253 0.01
649 193 0.01
650 408 0.02
651 692 0.04
652 15 0.00
653 18 0.00
654 16 0.00
655 15 0.00
656 6 0.00
657 18 0.00
658 13 0.00
659 11 0.00
660 6 0.00
662 11 0.00
663 15 0.00
664 5 0.00
665 19 0.00
666 10 0.00
667 9 0.00
668 23 0.00
669 42 0.00
670 25 0.00
671 43 0.00
672 46 0.00
673 28 0.00
674 34 0.00
675 48 0.00
676 43 0.00
677 56 0.00
678 46 0.00
679 46 0.00
680 40 0.00
681 50 0.00
682 40 0.00
683 46 0.00
684 61 0.00
685 37 0.00
686 30 0.00
687 48 0.00
688 65 0.00
689 77 0.00
690 65 0.00
691 73 0.00
692 77 0.00
693 50 0.00
694 35 0.00
695 12 0.00
696 31 0.00
697 51 0.00
698 45 0.00
699 20 0.00
700 18 0.00
701 19 0.00
702 15 0.00
703 24 0.00
704 31 0.00
705 23 0.00
706 20 0.00
707 23 0.00
708 23 0.00
709 7 0.00
710 8 0.00
711 1 0.00
712 6 0.00
ACGTcount: A:0.39, C:0.15, G:0.18, T:0.28
Consensus pattern (636 bp):
ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGGTTACAAATGACAAACTATTTGG
ACCAAATGATGCGATTTCTCGAGCATGGAATGCTCGAAAAATAGCTCGAAGGAATGGATCATCTT
GAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCTCA
AGGAACCAGGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTGTA
CAAAATGACAAATATTTGGACCAAATGATGCGACTTCCGAGCATGGAATGTTCGAGAAATGTCTC
AAAGAAATGGATCGTCTTGAATACTATAAGGAACCGAAGTTATAAAAGAACTCGTAAAAATTTGA
CAAGTTCGTCCAAGAACCAAGAGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAGACCA
AAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTT
TGAAAAATAGCTTGAAGGAATGGATCGTCTTGAATACTTTAAGGAACTGAAGTTATAAAAGAACT
CGTAAAAGTTTGACAAGTTCCAAAGTTCATCCAAGAACCAAGAGAGATACA
Found at i:11925926 original size:17 final size:17
Alignment explanation
Indices: 11925906--11925938 Score: 50
Period size: 17 Copynumber: 1.9 Consensus size: 17
11925896 TTTAAGGACT
11925906 TTTTAATTTTA-TTTAAG
1 TTTT-ATTTTAGTTTAAG
11925923 TTTTATTTTAGTTTAA
1 TTTTATTTTAGTTTAA
11925939 TAAGTGTTTG
Statistics
Matches: 15, Mismatches: 0, Indels: 2
0.88 0.00 0.12
Matches are distributed among these distances:
16 6 0.40
17 9 0.60
ACGTcount: A:0.27, C:0.00, G:0.06, T:0.67
Consensus pattern (17 bp):
TTTTATTTTAGTTTAAG
Found at i:11926197 original size:50 final size:50
Alignment explanation
Indices: 11926129--11926272 Score: 148
Period size: 50 Copynumber: 2.8 Consensus size: 50
11926119 ACTCTCATGA
* *
11926129 TTAGTTAAGTTTGCATCATAAATAATGACATGCATTAAGTAACTTACAAG
1 TTAGTTAAATTTGCATCATAAATAATGACATGCATTAAGTAACTCACAAG
* ** * * *
11926179 TTAGTTAAATATGCATCATAAATCCT-ATCATGCATTATGTAACTCCCATG
1 TTAGTTAAATTTGCATCATAAATAATGA-CATGCATTAAGTAACTCACAAG
* *
11926229 TTAGTTAAAGTTTGCATCATTAAATCAA-GTCATGCATTTAGTAA
1 TTAGTTAAA-TTTGCATCA-TAAAT-AATGACATGCATTAAGTAA
11926273 TCGATTAGTT
Statistics
Matches: 75, Mismatches: 14, Indels: 8
0.77 0.14 0.08
Matches are distributed among these distances:
49 1 0.01
50 49 0.65
51 8 0.11
52 17 0.23
ACGTcount: A:0.37, C:0.15, G:0.12, T:0.36
Consensus pattern (50 bp):
TTAGTTAAATTTGCATCATAAATAATGACATGCATTAAGTAACTCACAAG
Found at i:11927871 original size:215 final size:213
Alignment explanation
Indices: 11927410--11944983 Score: 12990
Period size: 215 Copynumber: 82.3 Consensus size: 213
11927400 CATCATCTTG
* * * *
11927410 TAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACGAACAATTTGGACCTAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * *
11927475 ATGCGATTTCTCGAGCATGAAATGCTCGGGAAAT-GTCTCGAAGGAATGGATCGTGTTGAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACT
*
11927539 TTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG-C-----CATGTTCGTCCAAGAACCA
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCA
* * * *
11927598 TGAGAGATACAATTATTACG
194 AGAGAGATACAATTCTCACT
* *
11927618 TAAATAAGTTTTTAATTCAAAGACTAAAAGTTGTTTACAAAATGACAAA-TCATTTGGAACAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACT-ATTTGGACCAAAT
* * * * * * * *
11927682 GATGCGATTTCTAGAGCAT-GAATATTCGAAAAATAGCTCGAAGGAAAGAATTGTCTTTAGTACT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * *
11927746 TTAAGGAATCAAAGTT-TAAAAAGAACACGTAAAAGTTTTACAAGTTCGGAAGTTCGTCCAAGAA
130 TTAAGGAA-CGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAA
* *
11927810 CCAAGAGAGAAATAATTCTCTA-T
191 CCAAGAGAGATACAATTCTC-ACT
* * * *
11927833 TAAATAAGTTTTTAGTTTAAAGACCAATAGTTGTTTAC-AAATGACAAACTATTTGGACCAGATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* *** * * * * *
11927897 ATGTGATTTC-CTGAGCATGGAATACCCCAAAAATAGCTTGAAGGAAAGGATCGTGTTGAATACT
66 ATGCGATTTCTC-GAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* *
11927961 TTTAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A---CAAGTTCGTCCTAGAACCA
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCA
*
11928020 AGAGAGATACAATTCTCACA
194 AGAGAGATACAATTCTCACT
* *
11928040 TAAATAAGTTTTTAATTTAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * *
11928105 ATACGATTTCTCGAGCATGGAATGTTCGAAAAATAGCTCGAAGGAATGGATCGTCGTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * * *
11928170 CAAGGAACCAAAGCTATAAAAGAAGTCGTAAAAGTTTG---A---CAAGTTCGTCCAAGAACCAA
131 TAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAA
*
11928229 GACAGATACAATTCTCA-T
195 GAGAGATACAATTCTCACT
* * *
11928247 GTAAATTAGTTTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGACAAACTATTTGGACCAAAT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
** * *
11928311 GATGCGA-TTCTCGATAATGGAATGCTCG-GTAAATAGCTCAAAGGAATGGATCGTCTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * *
11928374 TTTAAGGAACCAAACTTATAAAAAAAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGT-CTAGT
129 TTTAAGGAA-CGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAG-
* * *
11928438 AGCCAGGAGAGATACAATTCTCACG
189 AACCAAGAGAGATACAATTCTCACT
* * *
11928463 TAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTAAAAAATGACAAACCATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * *
11928528 AAGCGATTTC-CTGTA-CATGGAATGTTCGGGAAAT-GTCTAGAAGGAAAGGATCATGTTGAATA
66 ATGCGATTTCTC-G-AGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATA
* * *
11928590 CTTTAAGGAACAGAAGATA-AAACAAAACTCATAAAAGTTTGACAAGTTC-A-----TCCAAGAA
128 CTTTAAGGAAC-GAAGTTATAAA-AGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAA
* * *
11928648 CCATGAGAGATTA-TATTCTCACG
191 CCAAGAGAGA-TACAATTCTCACT
* * *
11928671 TAAATAAATTTTTAATTTAAAGACCAGAAGTTGTTTACAAAATGACAAA-TAATTTGGACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACT-ATTTGGACCAAAT
* * * * * * * * * *
11928735 GATGCGACTTCCCTAGTATGGAATGTTTGGGAAAT-G-TACGAAAGAAAGGATCATGTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCT-CGAAGGAATGGATCGTCTTGAATAC
* *
11928798 TTTAAGGAACCGAACTTATAAAAGAACTCGTAAAAGTTTGACAAG--C----TCGTCCTAGAACC
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACC
*
11928857 AAGAGAGATACAATTCTCACA
193 AAGAGAGATACAATTCTCACT
* *
11928878 TAAATAAGTTTTTAATTCAAACG-CCAAAAGTAGTTTACAAAAGGACAAACTATTTGGA-CAATA
1 TAAATAAGTTTTTAATTCAAA-GACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAA-A
* * * *
11928941 TGATGCGATTTCTTGAGCATGGAATGTTCGTGAAATAGCTTGAAGGAATGGATTGTCTTGAATAC
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* *
11929006 TTTAAGGAACTGAAGTTATAAAAGAACTCTTAAAAGTTTCACAAGTTCCAAAGTTC-TACCAAGA
129 TTTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C-AAGTTCGT-CCAAGA
11929070 ACCAAGAGAGATACAATTCTCA-T
190 ACCAAGAGAGATACAATTCTCACT
* * * * *
11929093 GTAAATAAGTTTTTAATTCAAAGACCAAAACCTAG-TTAC-AAATGACAACCTATTTGAACCAAG
1 -TAAATAAGTTTTTAATTCAAAGACCAAAA-GTTGTTTACAAAATGACAAACTATTTGGACCAAA
* * * * * *
11929156 TGATGCGATTTCTCGAGCATAGAATGCTCGAAAAATTGCTCGAAGGATTGGATCGTCTTGAATAA
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* ** * * *
11929221 TTTAAGGAACCGATGTTATAAAAGAACTCGTAAAAGTTTGACCATTTTAAAAGTTTGTCAAAGAA
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGA-CAAGTT-CAAGTTCGTCCAAGAA
* * *
11929286 CCAGGAGAGATTA-TATTCTCACG
191 CCAAGAGAGA-TACAATTCTCACT
* * * *
11929309 TAAATAAGTTTTTAATTAAAATACCAAAAGTTGTTTACGAAATGACAAACAATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * * * *
11929374 ATGCAACTTCCCGAGCATGGTATGTTCGGGAAAT-GTCTCGAAAGAAAGGATCGTGTTGAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACT
* * * * *
11929438 TTAAGTAACCGAAGGTATAAATGAAACTCGTAGAAGTTTG---A---CAAGTTCGTCCTAGAACC
130 TTAAGGAA-CGAAGTTATAAAAG-AACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACC
* *
11929497 AAGGGAGATACAATTCTCACA
193 AAGAGAGATACAATTCTCACT
* * * *
11929518 AAAATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGAATGACAAACTATTTAGACTA
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTAC--AA--AATGACAAACTATTTGGACCA
* * * * *
11929583 AATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGAAGGAATTGATCATCTTGAAT
62 AATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAAT
** *
11929648 ACTTTAAGGAACTGAAGTTATAAAA-AACTCGTAAAAGTTTGACAAGTTCCAAAATCGACCAAGA
127 ACTTTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-CAAGTTCGTCCAAGA
* *
11929712 ACCAAGAGGGATACAATTCTCATT
190 ACCAAGAGAGATACAATTCTCACT
** * * *
11929736 TAAATAAGTTTTTAATTCAAAGA-TGAAAGTTGGTTAC-AAATGATAACCTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * **
11929799 ATACGATTTCTCGAGCATGGAATGCTCGAAAAATTGCTCGAAGGAATGGATCACCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
*
11929864 TAAGGAACCGAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTCAAAAGTTCGTCCTAA-AAC
131 TAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCC-AAGAAC
* *
11929928 CAGGAGAGATACAATTCACA-T
192 CAAGAGAGATACAATTCTCACT
* * *
11929949 GTAAATAAG-TTTTAAATCAATGACCAAATGTTGTTTACAAAATGACGAAA-TATTTGGACCAAA
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC-AAACTATTTGGACCAAA
* * * * * * * * * *
11930012 TGATGCGATTTCGCGAACATGGAACGTTTG-GGAATTGTCTCAAAGGAAAGGATCGTGTTTAATA
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATA
* * * * * *
11930076 C-ATAAGGAATAGAAGTTATAAAAGGATTCATAAAAGTTTGACAAGTTC-----C-TCTAAGAA-
128 CTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAAC
* * ** *
11930133 CAGGAGGGATACAATAATCACG
192 CAAGAGAGATACAATTCTCACT
*
11930155 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAGCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * **
11930220 ATGCGATTTCCCGAGCATGG-ATGTTCGAAAAATAGCTTGAAGGAATGGATCGTCACGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* *
11930284 TAAGGAACTGAAGTTATAAAACAACTCTTAAAAGTTTGACAAGTTCCAAAGTTCGTCCAAGAACC
131 TAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C-AAGTTCGTCCAAGAACC
11930349 AAGAGAGATACAATTCTCA-T
193 AAGAGAGATACAATTCTCACT
* * * * *
11930369 GTAAATAAGTTGTTAATTCGAAGACCAAAAGATGGTTAC-AAATGACAACCTATTTGGACCAAAT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * * *
11930433 GATGCGATTTCCCGAGCATGGAATGTTCTAAAAATAGCTTGAAGGAATGGATCATCGTAAATACT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
*
11930498 TTAAGGAAC-------TAAAAGAAGTCGTAAAAGTTTGAC-A--T---GTTCGTCCAAGAACCAA
130 TTAAGGAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAA
11930550 GAGAGATACAATTCTCA-T
195 GAGAGATACAATTCTCACT
* *
11930568 GTAAATTAGTTTTTAATTCAAAGACCAAAAGCTAG-TTAC-AAATGACAAACTATTTGGACCAAA
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAA
* *
11930631 TGATGCGATTTCTC--G-A-GGAATGCTCG-GTAAATAGCTCGAAGGAATGGATCCTCTTGAATA
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATA
* *
11930691 CTTTAAGGAATCGAAGTTACAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCAAAGA
128 CTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGA
* *
11930756 ACCATGAGAGATA-ATATTCTCACA
190 ACCAAGAGAGATACA-ATTCTCACT
* * * *
11930780 TAAATAAGTTTTTAATTCAAAGACC-AAAGATATTTACAAAATGACAAACAATTTAGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
** ** * * * * ** * * *
11930844 ATATGACATCCCGAGCAAGGAATGTTTGGGAAAT-GTCTCGATA-GAAAAGATTGTGTTCAATAC
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGA-AGGAATGGATCGTCTTGAATAC
* * *
11930907 TTTAAGGAACGAAGTTATGAAAGAACTCGTAAAAGTTTGACAAGTTC-A-----TCCTAGAAGCA
129 TTTAAGGAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCA
* *
11930966 ACAGAGATACAATTCTCACA
194 AGAGAGATACAATTCTCACT
* *
11930986 TAAATAAGTTTTTAATTCAAACACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* *
11931051 ATGCGATTTCTTGAGCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCGTCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* *
11931116 TAAGGAACTGAAGTTATAAAAGAACTCTTAAAAGTTTGACAAGTTCCAAAGTTCGACCAAGAA-C
131 TAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C-AAGTTCGTCCAAGAACC
11931180 -AGAGAGATACCAATTCTCA-T
193 AAGAGAGATA-CAATTCTCACT
* * * ** *
11931200 GTAAATAAGTTTTTAATTTAAAGACCAAAAGTTGGTTAC-AAATGGCAGCCTATTTGGACCAAGT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * *
11931264 GATGCAATTTTTCGAGCATGGAATGCTCAAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * * * * * * *
11931329 TTAAGGAACCAAGTTATAAAAGAACTCATAAAATTTTGACCATTTCAGAATTCGACAAAGAACCA
130 TTAAGGAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCA-AGTTCGTCCAAGAACCA
* * ** **
11931394 GGAGAGATTA-TATTCAAAGA
194 AGAGAGA-TACAATTCTCACT
** ** * * * * *
11931414 CCAA-AAGTTGTTTAA---AAA-ATTACAA-------ACTATATGGATC-AA--A--TGAAGC-A
1 TAAATAAGTT-TTTAATTCAAAGACCAAAAGTTGTTTACAAAAT-GA-CAAACTATTTGGACCAA
* * * * * * * *
11931461 ATGAAGCGA--TCTTGTGCATGGAATGTTCGGGAAAT-GTCTCGAAGTAAAGGATCATGTTGAAT
63 ATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAAT
* *
11931523 ACTTTAA-GAACAGAAGTCATAAACA-AACTCGTAAAAGTTTGACAA--T----TTCATCCAAGA
127 ACTTTAAGGAAC-GAAGTTATAAA-AGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGA
* ** * * * *
11931580 AGCATCAAAAATACAATTATCACG
190 ACCAAGAGAGATACAATTCTCACT
* * * *
11931604 TAATTAAGTTTTTAATTCAAAGACAAAAAGTAGTTTACAAAATGACATACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * * * * *
11931669 AAGCAATTTCT-GTGCATGGAATGTTCGATAAAT-GTCTCGAAAGAAAGGATTGTGTTAAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACT
* *
11931732 TTAAGGAACCGAAGTTATAAAACAACTCGTAAAAGTTTGACAAGTTC-A-----TCCTAGAACCA
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCA
*
11931791 AGAGAGATACAATTTCTCACA
194 AGAGAGATACAA-TTCTCACT
* * * *
11931812 TAAATAAGTTTTTAATTCAAACACCAAAAGTAGTTTATAAAATGACAAACTATTTGAACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * *
11931877 ATGTGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCATCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * * * * *
11931942 TAAGGAACTGAAGTTATAAAAGAACTCTTAAAAGTTTGACAAGTTCCAAAGTTGGACGAAGGACA
131 TAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C-AAGTTCGTCCAAGAACC
11932007 AAGAGAGATACAATTCTCA-T
193 AAGAGAGATACAATTCTCACT
* * * *
11932027 GTAAATAAGTTTTTAATTCAAAGACC-AAAGCTGGTTAC-AAATGACAACCTATTTGGA-CAAGT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * *
11932089 GATGCGATTTCTTGAGCATGGAATGCTCGAAAAATTGCACGAAGGAATGGATCGTCTTGAATACT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * * * * *
11932154 TTAAGGAACCGATGTTATAAAAGAACTCATAAAAGTTTGACCATTTCGAAAGTTTGTCAAAGAAC
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAAC
* * * *
11932219 CAGGAGAGATTA-TACTCTCACG
192 CAAGAGAGA-TACAATTCTCACT
* * *
11932241 TAAATAAGTTTTTAATTCAAAGACAAAAAGTAGTTTACAAAATGACATACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * *
11932306 AAGCGATTTC-CTGTGCAAGGAATGTTC-AGGAAAT-GTCTCGAAGGAAAGGATCATGTTGAATA
66 ATGCGATTTCTC-GAGCATGGAATGTTCGA-GAAATAG-CTCGAAGGAATGGATCGTCTTGAATA
* *
11932368 C-TTAAGGAACAGAAGTTATAAAAGAACTTGTAAAAGATTGACAAGTTC-A-----TCCAAGAAC
128 CTTTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAAC
* * *
11932426 C-A-TGAGATACAAGTC-CACG
192 CAAGAGAGATACAATTCTCACT
* ** **
11932445 TAAATAAGTTTTTAATTTAAAGACTGAAAGTTGTTTACAAAATGACAAACTATACGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * *
11932510 A-ACTGATTTC-CTGTGCATGGAATGTTCTG-GAAAT-GTCTCGAAGGAAAGGATCGTGTTGAAT
66 ATGC-GATTTCTC-GAGCATGGAATGTTC-GAGAAATAG-CTCGAAGGAATGGATCGTCTTGAAT
* *
11932571 ACTTTAAGGAACAGAAGTTCTAAAAAGAATTCGTAAAAGTTTGACAAGTTC--G-TC-T--AAGA
127 ACTTTAAGGAAC-GAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGA
* * * *
11932630 CCCATGAGAGATACAATAAC-CACG
190 ACCAAGAGAGATACAAT-TCTCACT
* *
11932654 TAAATAAGTTTTTAATTTAAAGACCAAAAGTTGTTTACAAAATGACAAAACTATTAGGACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC-AAACTATTTGGACCAAAT
* * * *
11932719 GAAGCAATTTCTCGAGCATGGAATGTTC-AGAAAATAGCTCGAAGGAAAGGAAT-GTCTTCAATA
65 GATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGG-ATCGTCTTGAATA
* ** ** *
11932782 CTTTAAGGAACCGGAGTTATAAAAGAACTCACAAGTGTTTGAAAAAGTTCCAAAGTTCGTCCAAG
128 CTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTG-ACAAGTT-C-AAGTTCGTCCAAG
*
11932847 AACCAAGAGAGATACAATTCTC-TT
189 AACCAAGAGAGATACAATTCTCACT
* * * * * *
11932871 GTAAATATGTTTTTAACTCAAAGACCAAAAGCTAG-TTAC-AAATTACAACCTATTTGGACAAAA
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAA
* * * * * * * * *
11932934 TGGTGCTATTTCTCAAGCATGGAATGGTCAAAAAATTGCTCGATGGAATGGATCATCTTGAATAC
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * *
11932999 TTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TTGACAAGTTTGGAAGTTTGTCAAAGAA
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TT-CAAGTTCGTCCAAGAA
* * *
11933063 CTATGAGAGATA-ATATTCTCACA
191 CCAAGAGAGATACA-ATTCTCACT
* * * * *
11933086 TAAATAAG-TTTTGATTCAAAGACCAAAAGATGTTTACAAAATGACATTACAATTTAGACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA-AACTATTTGGACCAAAT
* * * * * *
11933150 GATGCGACTTCCCGAGCATGGAATGTTCGGGAAAT-GTCTCGAAGGAAAGGATTGTCGTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATAC
* * *
11933214 TTTAAGGAACCGAAGTTATAAAAGAAGTCGTAAAAGTTTGACAAGTTC--G-TC--CTAA-AACG
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACC
* *
11933273 AAGAGAGATACAATTCTCTCC
193 AAGAGAGATACAATTCTCACT
* *
11933294 T-AATAAGTTTTTTAATTCAAAGACCAAAAGTAG-TTACAAAATGACAAACTATTTGGACTAAAT
1 TAAATAAG-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * *
11933357 GATTCAATTTCTCGAGCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCGTCTTGAATACT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * * * * *
11933422 TTAAGGAACTAAAGTTATAAAATAACTCTTAAAACTTTGACAAGTTCCAAAGTTCGACCAATAAC
130 TTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C-AAGTTCGTCCAAGAAC
11933487 CAAGAGAGATACAATTCTCA-T
192 CAAGAGAGATACAATTCTCACT
* * * * *
11933508 GTAAATAAGTTTTTAATTTAAAGACCAAAAGCTG-GTAC-AAATGACAACCTATTTGGACCAAGT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * * *
11933571 GATGCAATTTCACGAGCATGGAATGCTCAAAAAATTGCTCGTAGGAATGGATCGTCTTGAATACT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * * ***
11933636 TTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACCATTTCGGAAG-TCGAAAAAGAAC
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAAC
* * *
11933700 CAGGAGAGACTA-TATTCTCACA
192 CAAGAGAGA-TACAATTCTCACT
*
11933722 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTGGACTAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * *
11933786 ATTCGATTTCTCGAGCATGGATTGTTCGAGAAAATAGCTTGAAGGAATGGATCGTCTTGAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * ** *
11933851 TTAAGGGACTGAAGTTATAAAAGAACTCTTAAAAGTTTGACAAGTTTCAAAGTTCAACCAAAAAC
130 TTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTC-AAGTTCGTCCAAGAAC
11933916 CAAGAGAGATACAATTCTCA-T
192 CAAGAGAGATACAATTCTCACT
** * * ** * *
11933937 GTAAATAAGTTTTTAATTCAAAGACCAAAACCTGGTTAC-AAATGACAACCTGCTCGGACCAAGT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * *
11934001 GATGCGATTTCTCGAGCATGGAATGCTCGAAAAATTGCTCGAA-GATACGGATCGTCTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGA-ATGGATCGTCTTGAATAC
* ** * *
11934065 TTTAAGGAACGAAGTTATAAAAGAACTCGTAAAATTTTGACCATTTTAGAAGTTCGTCAAAGAAC
129 TTTAAGGAACGAAGTTATAAAAGAACTCGTAAAAGTTTGA-CAAGTT-CAAGTTCGTCCAAGAAC
* * *
11934130 CAGGAGAGATTA-TATTCTCACG
192 CAAGAGAGA-TACAATTCTCACT
*
11934152 TAAATAAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTGGACCCAAA
1 TAAAT-AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGA-CCAAA
* * * * *
11934217 TGATGCGACTTC-CGAGCATGGAATGTTTGAGAAAT-GTCTCGAAAGAAAGGATCGTGTTGAATA
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATA
* *
11934280 CTTTAAGGAACCAAAGTTAATAAAAGAACTCGTAAAAGTTTG---A---CAAGTTCGTCCTAGAA
128 CTTTAAGGAA-CGAAGTT-ATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAA
* * *
11934339 CCAAAAGAGATATAATTATCA-T
191 CCAAGAGAGATACAATTCTCACT
* * * *
11934361 ATATATAAAGTCTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAATTATTTGGACCAAA
1 -TAAAT-AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAA
* * * * *
11934426 TGATACGATTTCTCGA-CTATGGATTATTCGAGAAATAGCTTGAAGGAATGGATCATCTTGAATA
64 TGATGCGATTTCTCGAGC-ATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATA
** * * * * ** *
11934490 CTTTAAGGATTTGATACGAAACGAAAGTGGAAGAGGA-TCAT-AAAG-TTGTCAAG-TCGTGGAT
128 CTTTAA-G----GA-ACG-AA-GTTA-T--AAAAGAACTCGTAAAAGTTTGACAAGTTC-AAGTT
* * * * ** * *
11934551 C-TACCCTAA-AGCTCTAGACAAATGTAA-TCTGAAACG
181 CGT--CC-AAGAAC-CAAGAGAGATACAATTCT--CACT
* * ***** * * ** * * * ** *
11934587 AAAACAAAGAAAGACAGATT-AATTGA-CAAGAAGAATAATT-CATAACG--AAATTAAAATGAA
1 TAAA-TAAG-TTTTTA-ATTCAA-AGACCAA-AAG-TTGTTTACAAAATGACAAACT-ATTTGGA
* ** * ** * * * *
11934647 ACAAA-GATGAAATGGTTGGTAACG-G-ATCCAATAG--AGAATGAAATTAGGGTTCTGGATGAA
59 CCAAATGATGCGAT--TT-CT--CGAGCATGGAAT-GTTCG-A-GAAA-TA--GCTC-GAAGGAA
* * * * * * ** * * * * **
11934707 AGAACCGTCATTG--GACCTCAGAAAACATCCCAACCAGATCTGGAAAATAAAAACACACAAACA
112 TGGATCGTC-TTGAATACTTTA-AGGA-A---CGA--AG-T-T--ATAA-AAGAACTCGTAAA-A
* * ** ** **
11934770 GATTTGTTAGAAG-T-GA-TT--TAAAAGATA--AA-AGCA-A-ACTGTT-T-AGG
163 G-TTTG--ACAAGTTCAAGTTCGTCCAAGA-ACCAAGAG-AGATACAATTCTCACT
* * * ** ** * * * * **** ** *
11934814 CAAGA-ATGATTGAAACGGC-AAGA--AAATA-TTGGATCTCCTAATTTTTGATGTTTCTTGATC
1 TAA-ATAAGTTTTTAA-TTCAAAGACCAAA-AGTT-G-TTTACAAAATGACAAACTAT-TTG---
* * * ** ** * * * ** ** ** **
11934874 GATCAGGGTAGGA-GAACG-TCCCTCTTG-AAGCAA-ATTC-A-ACTTAGAACGAAAACAACTAA
57 GACCA---AATGATG--CGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCG-AAGGAA-TGG
* *** * ** * * * * * *
11934933 ATCAGTAAC-CGTAA-ACAGAAAGAAATAAACTATATCAACTTAGAACGATGGATTAAAGATAGA
115 ATC-GT--CTTG-AATACTTTAAGGAACGAAGT-TAT-AA--AAGAAC--TCG-TAAAAGTTTGA
* ** * * * * * *
11934996 AAAG-AGAAGAATAACGTCTAAGAGCCTTGGAAACAATATAGAATCCACAA--CTCCCT
169 CAAGTTCAAG--T-TCGTC-CA-A------GAACCAAGAGAG-AT--ACAATTCTCACT
* * *** * * * * ** **
11935052 TCAAT-GGCTCTAATTTCCCCTCCAAGA--AAGAGATCTTGGCAAGAAAAAGCTTGAAGA-TGAT
1 TAAATAAG-T-T--TTT-AATTCAAAGACCAAAAGTTGTTTACAA-AATGA-C---AA-ACT-AT
*** * *** ** * * ** * *
11935113 TCCCA-CAACCTGA-AAAATTGT-TAAAACA---ACT-TCTAAAAAAATA-CTC-AA-G-A-GCA
54 TTGGACCAA-ATGATGCGATT-TCTCGAGCATGGAATGT-TCGAGAAATAGCTCGAAGGAATG-G
* *** * * * ** * * * * *
11935166 ATCTTGAAGAAAGAC-TCAAAG-A-GAA-TT-TATTATAAC-C--AAAA-TAATCA-AAATCCAG
115 ATCGTCTTG-AATACTTTAAGGAACGAAGTTATAAAAGAACTCGTAAAAGT-TTGACAAGTTCA-
* ** * **** * * **
11935221 TGTTTTTTCAAGGGGGAACGACCATGCTACTATAGGCCTC-C-
177 AGTTCGTCCAAGAACCAA-GA-GA-GATAC-A-A-TTCTCACT
* * ** * * * * * **
11935262 AAAATAAGCTTTCCTAACCCTAATAGAATTCTAACCA-TTACAGCTAATC-AAAT-AAAATAAAA
1 TAAATAAG-TTT-TTAATTC-AA-AG-A--CCAA-AAGTT---GTTTA-CAAAATGACAA-ACTA
**** * * ** ** * * * * * ** * **
11935324 TAAAAACAAAATAAAT-TTAAGTGTGGA-TATGAGGAT-TTCG-GCCAAGGGCTTTGAATGGGCT
53 TTTGGACCAAAT-GATGCGATTTCTCGAGCATG-GAATGTTCGAG-AAATAGC-TCGAA-GGAAT
** * * * * * * * * * * **
11935385 -CCTTGGC-TGAATTC-TTACATGATAATC-CACTTATTAAAATAAAAATTGGACCTAAAGTTAA
113 GGATCGTCTTGAATACTTTA-A-G-GAA-CGAAGTTA-T-AAA-AGAACTCGTA---AAAGTTTG
* ** * * * ** * *** * * *
11935446 ATACTTTCCAATTTGGGCCACTTTAA-TAATTTAG--CCTGATAT-TCAAT
168 ACAAGTT-CAAGTTCGTCCA--AGAACCAAGAGAGATAC-AAT-TCTCACT
* * * ** * ** * *
11935493 TAAATTACTTTCTAAACTTC-AAGA--TGAACTTGTAGA-ATATTAATGGGC---CTTTTTGCAA
1 TAAATAAGTTT-TTAA-TTCAAAGACCAAAAGTTGTTTACA-A--AAT-GACAAACTATTTG---
*** * * * * * ** * *
11935551 GAACTTGGTCTTGTGATCCG-TTTGCTCTTGA-AATTGACTCATTC-A-AGGTCG-TAC-AAGAA
57 G-AC-----CAAATGATGCGATTT-CTC--GAGCATGGAAT-GTTCGAGAAATAGCT-CGAAGGA
** * ** * *** * ** *
11935610 ATCCAAT-GTGCCTTG---GCTGCAA-GATTCGGTTTCTTTTTCAAGAA-T--TGAAA-TCTTGA
111 AT-GGATCGT--CTTGAATACTTTAAGGA-AC-G-AAGTTATAAAAGAACTCGTAAAAGT-TTGA
*** ** * ** * * * * **
11935666 -TTTTTCTTGATTCTTGAAATGTTTGAAACAACATA-ATTGGACCAAGAT-TCGGT
169 CAAGTTCAAG-TTCGTCCAA-----GAACCAAGAGAGA-T--A-CAA-TTCTCACT
*** * * * * * ** * * ** * ** *
11935719 TTCTTGATTTTCTTGA-TCAATGTGCGCATCTAGGGCCTTGGTAACGTAGTCTTC-GA-TAGTCT
1 TAAATAAGTTT-TTAATTCAAAG-AC-CA---AAAG--TTGTTTACAAAAT-GACAAACTA-T-T
** ** * * * * ** ** * *
11935781 T-GTTC-AATTTTGCTTAAATTTGCTTG-GCTTTTG-A-CCTCG-TTATTAGTCTTG-AGGAAGA
55 TGGACCAAATGATGC---GATTT-CTCGAGC-ATGGAATGTTCGAGAAATAG-CTCGAAGG-A-A
* ** * * ** ** *
11935839 TTGAGCCCATCG-CGTT-CATACGCTGGATTTTGGGTCCTACG-ACTCGTATCAGAACTGAAGTT
112 -TG-G---ATCGTC-TTGAATA--C----TTTAAGG---AACGAAGTTATAAAAGAACT--CG-T
* * *** * *
11935901 ACAAAATAACTCT-A-AAGTTTAA-CAAGTTCCAAAGTTCGACCAAGAACCAACAGACATACAAT
159 A-AAAGT---T-TGACAAGTTCAAGTTCG-TCC-----------AAGAACCAAGAGAGATACAAT
11935963 TCTCA-T
207 TCTCACT
* * * * *
11935969 GGAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACCAAGT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * *
11936033 GAAGTGATTTCTCTAGCATGGAATGCTCGAAAAATTA-CTCGAAGAAATGGATCGTCTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAA-TAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * * *
11936097 TTTAAGGAAATCAAAGTTTATAAAAGAAATCGTAAAAGTTTGACCATTTCAGAAGTTCGTCAAAG
129 TTTAAGG-AA-CGAAG-TTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAG
* * *
11936162 AACCAGGAGAGAT--TATTCTCACA
189 AACCAAGAGAGATACAATTCTCACT
* *
11936185 TAAATAAGTTTTTAATTCAAAGACC-AAAGTTGTTTACAAAATGACAAACAATTTGGCCCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * ** *
11936249 ATGTGACTTCTCGAGCATGGAATGTTCGAGAAAT-GTCTCGAAAGAAAAGATCGTGTGTGGAATA
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCT-T-GAATA
* **
11936313 CTTTAAGGAAACGAAGTTATAAAA-AAGCTTGTAAAAGTTTG---A---CAAGTTCGTCCTTGAA
128 CTTTAAGG-AACGAAGTTATAAAAGAA-CTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAA
* *
11936371 -CAAGAGAGATTA-ATTTCTCACA
191 CCAAGAGAGA-TACAATTCTCACT
* *
11936393 TAAATAAG-TTTTAATTCAAAGACAAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * *
11936457 ATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGAAGGAATGGATCGTGC-TGAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGT-CTTGAATACT
*
11936521 TTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---AA---CAA-TTCGTCCTAGAACCA
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCA
* *
11936579 AGAGGGATACAATTCTCACA
194 AGAGAGATACAATTCTCACT
* *
11936599 TAAATAAGCTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * *
11936664 ATGCAATTTCTCGAGCATGGATTGTTCGAGAAATAGCTTGAAGGAATGGATCGTCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * *
11936729 TAAGAAACTGAAGTTATAAAAGAACTCTTAAAAGTTTGACAAGTTTCAAAGTTCGACCAAGAACC
131 TAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTC-AAGTTCGTCCAAGAACC
*
11936794 AAGAGAGCTACAATTCTCA-T
193 AAGAGAGATACAATTCTCACT
* * *
11936814 GTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGACC-AAT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
** * * * *
11936877 GATAAGA--T-TCGAGCATGGAATGCTCGAAAAAATTGCTCGAAGGAATGGATCATCTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCG-AGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * *
11936939 -TTAAGAAACCAAAGTTATAAAAAGAACTCGTAAAAATTTGACAAGTTCTAAAGTTCGTCCTAGA
129 TTTAAGGAA-CGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGA
* * *
11937003 ACCAGGAGAGATACAATTCACACG
190 ACCAAGAGAGATACAATTCTCACT
*
11937027 TAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACGAAA-TATTTGGACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC-AAACTATTTGGACCAAAT
* * * * * * *
11937091 GATGCGA-CTC-CAGAGCATGGAATGTTCGGGAAAT-TCTTCGAAAGAAAGAATCGTGTTGAATA
65 GATGCGATTTCTC-GAGCATGGAATGTTCGAGAAATAGC-TCGAAGGAATGGATCGTCTTGAATA
* *
11937153 CTTTAA-GAACCGAAGTTATAAAATAACTCGTAAAAGTTTG---A---CAAGTTCGTCCTAGAAC
128 CTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAAC
*
11937211 CAAG-GAGATACACATTCTCACA
192 CAAGAGAGATACA-ATTCTCACT
* * *
11937233 TAAATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTATAAAATGATAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * *
11937298 ATGCAATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGACGGAATGGATCATCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * **
11937363 TAAGGAACTGAAG-TATAAAAAAACTTGTAAAAGTTTGACAAGTTCCAAAGTTCAACCAAGAACC
131 TAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-C-AAGTTCGTCCAAGAACC
*
11937427 AAGAGAGATGA-AATTCTCATT
193 AAGAGAGAT-ACAATTCTCACT
* * * * *
11937448 TAAATAAGTTTTTTATTCAAAGACCAAAAGCTGGTTAC-AAATGACAACCTATTTGGGCCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * ** * *
11937512 ATACGATTTCTCGAGCATGGAATGCTCGAAAAATTTCTTGAAGGAATGGATCATCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* ** * * * *
11937577 TAAGGAACCGATGTTATAAAAGAACTCGTAAAAAATTGACAAGTTCTAAATTTCATCCTAGAACT
131 TAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAACC
* * *
11937642 AGGAGAGATACAATTCACACG
193 AAGAGAGATACAATTCTCACT
* * *
11937663 TAAATAATTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGATGAAA-TATTTGGACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGA-CAAACTATTTGGACCAAAT
* * * * *
11937727 GATGCGATTTCTCGAGCATGGAATGTTC-ATGAAATTGCTTTGTA-GAAAGGATCATCTTGAATA
65 GATGCGATTTCTCGAGCATGGAATGTTCGA-GAAATAGC-TCGAAGGAATGGATCGTCTTGAATA
* * * * * *
11937790 CTATAACGAACCGAAGTTATAAAAGAAATCGTAAAAGTTTAACAAGTTTGAAAGTTCATCCAAGA
128 CTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TT-CAAGTTCGTCCAAGA
* *
11937855 ACCAAGAGAGAAACAATTCTCAAT
190 ACCAAGAGAGATACAATTCTCACT
* * * *
11937879 TAAATAAGTTTTTAATTTAAAGACCAAAATTTATTTACAAAA-GACCAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * *** *
11937943 ATGCAATTTC-CTGAG-ATGGAATGCTCGAAAAACT-CCTCGAAGGAATGGATAAACATGAATAC
66 ATGCGATTTCTC-GAGCATGGAATGTTCGAGAAA-TAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * *
11938005 TTCAAGGAATTGAAGTTATAAAAAGAACTTGTAAAAGTTTGACAAGTTC-A-----TCCAAGAAA
129 TTTAAGGAA-CGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAAC
*
11938064 CAAGAGAGATACAATTCTCATT
192 CAAGAGAGATACAATTCTCACT
* *
11938086 TAAATAAGTTTTTAATTCGAAGACCAAAAGCTT-TTTAC-AAATGACAAACTATTTGTACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTATTTGGACCAAAT
* ** * * *
11938149 GATGCCATTTCTTAAGCATGGAATGCTT-GAAAAATAGCTCGATGGAATGGATCATCTTGAATA-
65 GATGCGATTTCTCGAGCATGGAATG-TTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* *
11938212 TTTAAGGAACTGAAGTTATAAAAGAACTCGTTAAAAGTTCGACAAGTTCGAAAGTTCATCCAAGA
129 TTTAAGGAAC-GAAGTTATAAAAGAACTCG-TAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGA
*** * *
11938277 ACTGGGAGAGATACAGTTCTCACG
190 ACCAAGAGAGATACAATTCTCACT
* **
11938301 TAAATAAGTTTTTAAATCAAAGACCAAAAGTTGCATACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * *
11938366 ATGCGATTTTTTCGACCATGGAATGTTCGAGAAAT-GTCTCGAAAGAAAGGATCGTCTTAAATAC
66 ATGCGA-TTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATAC
*
11938430 TTTAAGGAACTGAAGTTATAAACGAACTCGTAAAAGTTTGACAAGTTC-A-----TCCAAGAACC
129 TTTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACC
*
11938489 AAGAGAGATACAATTCTCACA
193 AAGAGAGATACAATTCTCACT
* *
11938510 TAAATAAGTATTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACAAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * *
11938575 ATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTCAAAAGAATGGATCGTCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * *
11938640 TAAGGAACTAAATTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAAGC
131 TAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAACC
11938705 AAGAGAGATACAATTCTCA-T
193 AAGAGAGATACAATTCTCACT
* *
11938725 GTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAGAT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * * * * *
11938789 GATGTGACTTCTCGAGCATGG-ATTTCTCAAAAAATAGCTAGAATGATTGGATTGTCTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGT-TCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * **
11938853 TTTAAGGAACTAAAGTTATAGAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTTATCCAAGAA
129 TTTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAA
*
11938918 CCGAGAGAGATACAATTCTCA-T
191 CCAAGAGAGATACAATTCTCACT
* *
11938940 GTAAATAAGTTTTTAATTCAAAAACC-AAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAAT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * *
11939003 GATGCGATTTCTTGAGAATGGAATGCTCG-GAAAATAGCTCTAAGGAATCGATCATCTTGAAATA
65 GATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTG-AATA
* * * * *
11939067 CTTTAAGGAACCAAAGTTATAAAAGAACTCGTTAAAGTTTAACAAGTTTGAATGTTCGTCCAAGG
128 CTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTCAA-GTTCGTCCAAGA
* * * *
11939132 AGCAGGAGAGATACAATTCTCTCG
190 ACCAAGAGAGATACAATTCTCACT
* * *
11939156 TAAATAAGTTTTTAACTCCAAGACCAAAAGTTGTTTACAAAATGATAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* *
11939221 ATGCGATTTCTCGAGCATGGAATGTTCGGGAAAT-GCCTCGAAGGAAAGGATCGTCTTGAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACT
* *
11939285 TTAAGGAACTGAAGTTATAAAAGAACTCATATAAGTTTG---A---CAAGTTCGTCCAAGAACCA
130 TTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCA
*
11939344 AGAGAGATACAATTCTCACG
194 AGAGAGATACAATTCTCACT
* * *
11939364 TAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATAACAAACTATTTGGACCAAATA
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * *
11939429 ATGCGATTTCCCAAGCATGGAATGTTCGAGAAATTGCTCAAAGGAAAGGATTGTCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * * *
11939494 TCAGGAACTGAAGTTATAAAAGAACTTGTTAAAGTTTGACAAGTTC--G-T-G--CAAGAACCAG
131 TAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAA
11939553 GAGAGATACAATTCTCA-T
195 GAGAGATACAATTCTCACT
* * * * * *
11939571 GCAAATAAGTTTTAAATTGAAAGACCAAAATTTGTTTAC--AA-GACAAAATATTTGGATCAAAT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * **
11939633 TATGCGATTT-TCGAGCTTGGAATGTTCGTGAAATTA-CTCGAAGGAAAGGATCATCTAAAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAA-TAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * *
11939696 TTTAAGGAACTAAAGTTAGAAAAGAACTCGTAAAACTTTGACAAGTTCAGAAGTTCGTCCACGAA
129 TTTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAA
*
11939761 CCAAGAGAGATACAATTCTCACG
191 CCAAGAGAGATACAATTCTCACT
* * * * *
11939784 TAAATAAGTTTTT-ATTCGAAGACCAAAAAATT-ATTATAAAATGACAAACTATTTGAACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * * * *
11939847 GATGCAATTTCTTGAGCATGGAATGTTCGGGAAAT-GTCTCGATGGAAAGGGTAGACTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATAC
* * * * *
11939911 TTTTAGGAATCGAAGTTATAAAAGAACTCATAAAAGTTT-A-AAATT----TTCGACCAGGAACC
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACC
* *
11939970 AAGAGAGATACTATTCTCACA
193 AAGAGAGATACAATTCTCACT
**
11939991 TAAATAAGTTTTTAATTCAAAGACCAAATTTTGATTT-C---ATGACAAACTATTTGGACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACAAACTATTTGGACCAAAT
* * * *
11940052 AATGCGATTTCTTGAGCATGGAATGTTC-ATGAAATTGCTCAAAGG-ATGGGATCGTCTTGAATA
65 GATGCGATTTCTCGAGCATGGAATGTTCGA-GAAATAGCTCGAAGGAAT-GGATCGTCTTGAATA
* * *
11940115 CTTTAAGGAACCGATGTTATAAAAGAACTTGTAAAAGTTTGAC-AGTTCTGAAGTTCATCCAAGA
128 CTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGA
* * * *
11940179 ACCAAAAGAGAAACAATTCTTAAT
190 ACCAAGAGAGATACAATTCTCACT
* * * *
11940203 TAAATAAGTTTTTAATTGAAAGACCAAAAGTTGTTTAC-AAATGAAAAACTATTTGGACCAGATA
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * * ** * * * *
11940267 ATGCAATATCCCGAGCTTGGAATG--CTAAAAATTCCTTGAAGGAATGGATCATCATAAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* *
11940330 TAAGGAATCGAAGTTATAAAATAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAAAACC
131 TAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAACC
11940395 AAGAGAGATACAATTCTCA-T
193 AAGAGAGATACAATTCTCACT
* *
11940415 GTAAATAAGTTTTTAATTCAAAGATCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAAT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
* * * * * * *
11940479 GATGC-AATTCTCGAGCATGGAATGCTCCAAAAATAGATCAAAGGAATGG---GTCTTAAATACT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * *
11940540 TTAAGGAACTGGAGTTGTAAAAGAACTCGTAAAAG-TTGACATGTTCTGAAGTTCGTCCAAGAAC
130 TTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAAC
* * *
11940604 CAAGAGAGAAACAATTCTTAAT
192 CAAGAGAGATACAATTCTCACT
* * *
11940626 TAAATAAG-TTTTAATTTAAAGACCAAAAGTTGTTTAC-AAATGACAAACTATTTGGACCAGATA
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * ** * * * *
11940689 ATGTGATTTCCCGAGCATGGAATGCTCGAAAAATTCCTTGAAGGAATGGATCATCATAAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * * *
11940754 TAAGGAACCGAAGTTATAAAATAACTCGTAAAAGTTTGACAAGTTGGAAGTTCGTCTAAAAACCA
131 TAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTT-CAAGTTCGTCCAAGAACCA
*
11940819 AGAGAGATACAGTTCTCA-T
194 AGAGAGATACAATTCTCACT
* *
11940838 GTAAATAAGTTTTTAATTCAAAAACCAAAAGTTGGTTAC-AAATGACAAACTATTTGGACCAAAT
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT
*
11940902 GATGCGATTTCTCGAGCATGGAATGCTCCGA-AAATAGCTCGAAGGAATGGATCGTCTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATG-TTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
*
11940966 TTTAAGGAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCATCCAAGAA
129 TTTAAGGAAC-GAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAA
*
11941031 CCAAGAGAGTTACAATTCTCA-T
191 CCAAGAGAGATACAATTCTCACT
* *
11941053 GTAAAATAAGTATTTAATTCAAAGACCAAATGTTGTTTAC-AAATGACAAACTATTTGGACCAAA
1 -T-AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAA
* * * * * *
11941117 TGATGCGATTTCTCGAGCATGGAATGCTAGAAAAATAGGTTGAAGAAATGGATCGTCTTGAATAC
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * *
11941182 TTTATGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGATTAGAAGTTCATCCAAGAA
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TT-CAAGTTCGTCCAAGAA
* * *
11941247 -CTAGAAGAGATATAATTCTCACG
191 CCAAG-AGAGATACAATTCTCACT
*
11941270 TAAATAAG-TTTTAATTGAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * ** *
11941334 ATGCGATTTCCCGAGTATGGAATGTTTG-GGAATTGTCTCGAAGGAAACGATCGTCTTGAATACA
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAG-CTCGAAGGAATGGATCGTCTTGAATACT
* * * *
11941398 TTAAGGAATTGAAGTTATAAAAGAACTCATAACAA-TTTTACAAGTTC-A-----TCCAAGAAAC
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCAAGTTCGTCCAAGAACC
*
11941456 AAGAGAGATACAATTCTCACA
193 AAGAGAGATACAATTCTCACT
* * *
11941477 TAAATAAGTTTTAAATTCAAAGACCAAAAGTTATTCACAAAATGACAAA-TCATTTGGACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACT-ATTTGGACCAAAT
* * * *
11941541 GATGCGATTTCTTGAGCATGGAATGTTTG-GAAAATAGCTCGAATGAATGGATTGTCTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* *
11941605 TTTAAGGAATTGAAGTTATAACAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAA
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAA
* *
11941670 CCAAGAGAGAAACAATTCTCAAT
191 CCAAGAGAGATACAATTCTCACT
** * *
11941693 TAAATAAGTTTTTAATTTGAAGACCAAAAGTTGTTTAC-AAATGACAAACTACTTGGACCAGATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * ** * *
11941757 ATGCGATTTCCCGAGCATGGAATGCTCGAAAAATTCCTCGAAGGAATGGATCATCATGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * * **
11941822 TAAGACGAACGAAGATATAAAATAACTCGTAAAAG-TT--C-GGTT---GTTCGTCCAAGAATGA
131 TAAG--GAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCA
* * * * * *
11941880 AAAGAGAAATAATTTTGACG
194 AGAGAGATACAATTCTCACT
* * * ** *
11941900 TAACTAAGATTTTAATTCCAAGATGAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAATTG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * *
11941965 ATGCGATTTCTCGAGCATGGAATGATCGA-AAATAACTCGAAGGCATGGATCGTCTTGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * *
11942029 TAAGAAAACGAAGTTATAAAAGAACTTGTAAAAGTTTGACAAGTTCAAAAGTTCATCCAAGAACC
131 TAAG-GAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAACC
* * * * *
11942094 AAAAGAGAGACAATTATGACG
193 AAGAGAGATACAATTCTCACT
* * *
11942115 TAAATAAGTTTTTAATTCAAAGATCGAAAGTTGTTTACAAAATTACAAACTATATTGGACCAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTAT-TTGGACCAAAT
* * * * *
11942180 GGTGTGATTTCCCGAGCATGGAATGTTC-AGAAAATTGCTTGAAGGAATGGATCGTCTTGAATAC
65 GATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * *
11942244 TTTAAGCAACCAAATTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTGAAAGTTCGTCCAAGAA
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TT-CAAGTTCGTCCAAGAA
* * *
11942309 CCAGGAGAGACACAATTCTCACG
191 CCAAGAGAGATACAATTCTCACT
* * *
11942332 TAAATAAG-TTTTAATTCAATGACCAAAAGTTATTTACCAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * *
11942396 ATGCGATTTCCCGA-TATTTGAATGTTTG-GAAA-ATGTCTCGAAGGAAAGGATCGTGTTGAATA
66 ATGCGATTTCTCGAGCA-TGGAATGTTCGAGAAATA-G-CTCGAAGGAATGGATCGTCTTGAATA
11942458 CTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A---CAAGTTCGTCCAAGAA-
128 CTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAAC
*
11942516 CAATGAGAGATACAATTCTCACA
192 CAA-GAGAGATACAATTCTCACT
* *
11942539 TAAATAAGTTTTTAATTCAAAGACCAAAAGCTGTTTACAAAATGACAAACTATTTGGACCAAATA
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * * * *
11942604 ATGTGAATTCCCGAGCATGCAATCTT-TAGGAAATTGCTCGAAGGAAAGG-TCGTCTTGAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGA-GAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * *
11942667 TTAAGGAACCGAAGTTATAAATGAACTCGTAAAAGTTTGGCAAGTTTGGAAGTTCGTCCAAGAAC
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TT-CAAGTTCGTCCAAGAAC
* *
11942732 CAAGAGAGATACGATTCTCACG
192 CAAGAGAGATACAATTCTCACT
* *
11942754 TAAATAAGGTTTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * * * * * * * *
11942819 ATGTGATTTCCCGAGCATCGAATGCTCGTGCAATTGCTTGAAGAAAAGGATCGTCTTGAATATTA
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATA--C
*
11942884 TTTATA-GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACATGTTCGGAAGTTCGTCCAAGA
129 TTTA-AGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGA
* * *
11942948 ACCAAGAGAGAAACAATTCTTAGT
190 ACCAAGAGAGATACAATTCTCACT
* * *
11942972 TAAATAAGTTTTTAATTTAAAGACCAAAAGTTGTTTAC-AAATGACAATCTATTTGGACCAGATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * * ** * * *
11943036 ATGCGATTTCCCGAGCATGGAATGCTCAAAAAATTCCTAGAAGGAATGGATCATCATGAATACTT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
* * * * *
11943101 TAAGGAACCGAAGATATAAAATAACTCGTAAAAGTTTGACAAGTTTGGATGTTTGTCCAAGAACC
131 TAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TT-CAAGTTCGTCCAAGAACC
* * *
11943166 AA-AGAGAAACAATTTTGACGT
193 AAGAGAGATACAATTCTCAC-T
* *
11943187 AAAATAAGTTTTTAATTCAAAGACGAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* *
11943252 ATGCGATTTCTCAAGCATGGAATGTTCG-GAAAATAACTCGAAGGAATGGATCGTCTTGAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACT
11943316 TTAAGGAAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAAGTTCGTCCAAGAAC
130 TTAAGG-AACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAAC
* * * *
11943381 CAAAAGAGAGACAATTATGA-T
192 CAAGAGAGATACAATTCTCACT
* *
11943402 GTAAATAAGTTTTAAATTCAAAGATCAAAAGTTGTTTACAAAATGACAAACTATTTTGGACCAAA
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAA
* * * * * *
11943467 TGGTGTGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCATCTTGAATAC
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * * *
11943532 TTTAAGGAATCGAATTTATAAAAGAACTCGTAACAGTTTAACAAGTTCGGAAGTTCATCGAAGAA
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAA
* * *
11943597 CAAAGAGAGAAACAATTCTCACA
191 CCAAGAGAGATACAATTCTCACT
* * *
11943620 TAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTAAAAAATGACAAACTATTTTGGAACAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAAT
* * * * * *
11943685 GATGCGATTTCCCGATCATTGAACGTTC-AGAAA-ATGTCTC-AGAGGAGTGGATCATCTTGAAT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATA-G-CTCGA-AGGAATGGATCGTCTTGAAT
* * *
11943747 ACTTTAAGGAACCGAATTTATAAAAGAACTCGTATAAGTTTGACAAGTTCGGAAGTTCGTCCAAA
127 ACTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAG
* * * *
11943812 AACCAAAAGAGAAACAATTTTGACGT
189 AACCAAGAGAGATACAATTCTCAC-T
* *
11943838 AAAATAAGTTTTTAATTCAAAGACGAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* *
11943903 ATGCGATTTCTCAAGCATGGAATGTTCG-GAAAATAACTCGAAGGAATGGATCGTCTTGAATACT
66 ATGCGATTTCTCGAGCATGGAATGTTCGAG-AAATAGCTCGAAGGAATGGATCGTCTTGAATACT
11943967 TTAAGGAAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAAGTTCGTCCAAGAAC
130 TTAAGG-AACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAAC
* * * *
11944032 CAAAAGAGAGACAATTATGA-T
192 CAAGAGAGATACAATTCTCACT
* *
11944053 GTAAATAAGTTTTAAATTCAAAGATCAAAAGTTGTTTACAAAATGACAAACTATTTTGGACCAAA
1 -TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAA
* * * * * *
11944118 TGGTGTGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCATCTTGAATAC
64 TGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * * *
11944183 TTTAAGGAATCGAATTTATAAAAGAACTCGTAACAGTTTAACAAGTTCGGAAGTTCATCGAAGAA
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAA
* * *
11944248 CAAAGAGAGAAACAATTCTCACA
191 CCAAGAGAGATACAATTCTCACT
* * *
11944271 TAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTAAAAAATGACAAACTATTTTGGAACAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAAT
* * * * * *
11944336 GATGCGATTTCCCGATCATTGAACGTTC-AGAAA-ATGTCTC-AGAGGAGTGGATCATCTTGAAT
65 GATGCGATTTCTCGAGCATGGAATGTTCGAGAAATA-G-CTCGA-AGGAATGGATCGTCTTGAAT
* * *
11944398 ACTTTAAGGAACCGAATTTATAAAAGAACTCGTATAAGTTTGACAAGTTCGGAAGTTCGTCCAAA
127 ACTTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAG
* * * * *
11944463 AACCAAAAGAGAAACAATTTTGACG
189 AACCAAGAGAGATACAATTCTCACT
11944488 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACC-AATA
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAAT-
* * * * * * *
11944552 GATGCGATTTC-CTGATCATGGAATGTTTGGGAAATTGCTCGAAGGAAAGGATCATCTTTAATAC
65 GATGCGATTTCTC-GAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATAC
* * * *
11944616 TTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTCGGAAGCTCGTCTAAGAA
129 TTTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAA
* * *
11944681 CCATGAGAGAAAGAATTCTCACT
191 CCAAGAGAGATACAATTCTCACT
* * * * *
11944704 TAAATAAGTTTTTAATTTAAA-ACCAATAGTTGTTTAC-AAATGACAAATTTTTTGGACCAAGTG
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
* * * *
11944767 ATGCTG-TTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCATGAATACT
66 ATGC-GATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACT
* * * * *
11944831 TGAAAGAACCAAAGTTATAAAAGAACTCATGAAAGTTTGACAAGTTCAGAAGTTCGTCCAAGAAC
130 TTAAGGAA-CGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGTCCAAGAAC
* * * * * *
11944896 CAAAAGATAAACAATTTTGACG
192 CAAGAGAGATACAATTCTCACT
*
11944918 TAAATAAG-TTTTAATTCAAAGACC-AAA--TGTTTACAAAATGACAAACTATTTTGGAACAAAT
1 TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAA-
11944979 TGATG
64 TGATG
11944984 TGAGCTCGTC
Statistics
Matches: 13973, Mismatches: 2413, Indels: 1954
0.76 0.13 0.11
Matches are distributed among these distances:
189 2 0.00
190 24 0.00
191 5 0.00
193 3 0.00
194 4 0.00
195 47 0.00
196 7 0.00
197 74 0.01
198 1 0.00
199 111 0.01
200 8 0.00
201 5 0.00
202 4 0.00
203 26 0.00
204 211 0.02
205 249 0.02
206 532 0.04
207 1278 0.09
208 1354 0.10
209 440 0.03
210 330 0.02
211 223 0.02
212 460 0.03
213 642 0.05
214 1362 0.10
215 2454 0.18
216 1772 0.13
217 1361 0.10
218 350 0.03
219 21 0.00
220 8 0.00
221 11 0.00
222 18 0.00
223 21 0.00
224 35 0.00
225 38 0.00
226 48 0.00
227 33 0.00
228 45 0.00
229 26 0.00
230 22 0.00
231 35 0.00
232 34 0.00
233 28 0.00
234 18 0.00
235 15 0.00
236 17 0.00
237 9 0.00
238 10 0.00
239 16 0.00
240 15 0.00
241 15 0.00
242 20 0.00
243 8 0.00
244 13 0.00
245 4 0.00
246 6 0.00
247 1 0.00
248 1 0.00
249 7 0.00
250 7 0.00
251 15 0.00
252 1 0.00
254 10 0.00
255 1 0.00
259 2 0.00
ACGTcount: A:0.40, C:0.15, G:0.18, T:0.28
Consensus pattern (213 bp):
TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATG
ATGCGATTTCTCGAGCATGGAATGTTCGAGAAATAGCTCGAAGGAATGGATCGTCTTGAATACTT
TAAGGAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGTCCAAGAACCAAG
AGAGATACAATTCTCACT
Found at i:11933953 original size:429 final size:423
Alignment explanation
Indices: 11931476--11934498 Score: 2903
Period size: 429 Copynumber: 7.1 Consensus size: 423
11931466 GCGATCTTGT
* * * * *
11931476 GCATGGAATGTTCGGGAAA-TGTCTCGAAGTAAAGGATCATGTTGAATACTTTAA-GAACAGAAG
1 GCATGGAATGTTCGAGAAATTG-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAG
* * * * * * *
11931539 TCATAAACA-AACTCGTAAAAGTTTGACAATTTC-A--TCCA-AGAAGCATCAA-AAATAC-AAT
65 TTATAAA-AGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGACA-AAGAACCAAGAGAGACTAAT
* * * * *
11931597 TATCACGTAATTAAGTTTTTAATTCAAAGACAAAAAGTAGTTTACAAAATGACATACTATTTGGA
128 TCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGA
* * * * * * * * *
11931662 CCAAATGAAGCAATTTCT-GTGCATGGAATGTTCGATAAATGTCTCGAAAGAAAGGATTGTGTTA
193 CCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATG-CTCGAAGGAATGGATCGTCTTG
* * *
11931726 AATACTTTAAGGAACCGAAGTTATAAAACAACTCGTAAAAGTTTGACAAG-TTC-A--TCCTAGA
257 AATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTCAAGTTCCAAAA
* * *
11931787 ACCAAGAGAGATACAATTTCTCACATAAATAAGTTTTTAATTCAAACACCAAAAGTAGTTTATAA
322 ACCAAGAGAGATACAA-TTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT-GTTTACAA
* *
11931852 AATGACAAACTATTTGAACCAAATGATGTGATTTCTCGA
385 AATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA
* * * * *
11931891 GCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCATCTTGAATACTTTAAGGAACTGAAGT
1 GCATGGAATGTTCGAGAAATTGCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGT
* * * * *
11931956 TATAAAAGAACTCTTAAAAGTTTGACAAGTTCCAAAGTTGGACGAAGGACAAAGAGAGA-TACAA
66 TATAAAAGAACTCGTAAAAGTTTGACAAGTT-C-AAGTTCGACAAAGAACCAAGAGAGACT--AA
* * * *
11932020 TTCTCATGTAAATAAGTTTTTAATTCAAAGACC-AAAGCTGGTTAC-AAATGACAACCTATTTGG
127 TTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGG
* * * * *
11932083 A-CAAGTGATGCGATTTCTTGAGCATGGAATGCTCGAAAAATTGCACGAAGGAATGGATCGTCTT
192 ACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAA-TGCTCGAAGGAATGGATCGTCTT
* * * *
11932147 GAATACTTTAAGGAACCGATGTTATAAAAGAACTCATAAAAGTTTGACCA-TTTCGAAAGTTTGT
256 GAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTC--AAG-TT-C
* * * *
11932211 CAAAGAACCAGGAGAGATTA-TACTCTCACGTAAATAAGTTTTTAATTCAAAGACAAAAAGTAGT
317 CAAA-AACCAAGAGAGA-TACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGT-GT
* * *
11932275 TTACAAAATGACATACTATTTGGACCAAATGAAGCGATTTC-CTGT
379 TTACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTC-GA
* * * *
11932320 GCAAGGAATGTTC-AGGAAA-TGTCTCGAAGGAAAGGATCATGTTGAATAC-TTAAGGAACAGAA
1 GCATGGAATGTTCGA-GAAATTG-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAA
* * * * *
11932382 GTTATAAAAGAACTTGTAAAAGATTGACAAGTTC-A--TC--C-AAGAACCATGAGATAC-AAGT
64 GTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGACAAAGAACCAAGAGAGACTAATT
* ** **
11932440 C-CACGTAAATAAGTTTTTAATTTAAAGACTGAAAGTTGTTTACAAAATGACAAACTATACGGAC
129 CTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGAC
* * * *
11932504 CAAATGA-ACTGATTTC-CTGTGCATGGAATGTTCTG-GAAATGTCTCGAAGGAAAGGATCGTGT
194 CAAATGATGC-GATTTCTC-GAGCATGGAATGTTC-GAGAAATG-CTCGAAGGAATGGATCGTCT
* * * *
11932566 TGAATACTTTAAGGAACAGAAGTTCTAAAAAGAATTCGTAAAAGTTTGACAAG-TTC--G-TCTA
255 TGAATACTTTAAGGAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTTCAAGTTCCA
* * * * *
11932627 AGACCCATGAGAGATACAATAAC-CACGTAAATAAGTTTTTAATTTAAAGACCAAAAGTTGTTTA
319 AAAACCAAGAGAGATACAAT-TCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TGTTTA
* * *
11932691 CAAAATGACAAAACTATTAGGACCAAATGAAGCAATTTCTCGA
382 CAAAATGAC-AAACTATTTGGACCAAATGATGCGATTTCTCGA
* * *
11932734 GCATGGAATGTTC-AGAAAATAGCTCGAAGGAAAGGAAT-GTCTTCAATACTTTAAGGAACCGGA
1 GCATGGAATGTTCGAG-AAATTGCTCGAAGGAAAGG-ATCGTCTTGAATACTTTAAGGAACCGAA
** ** * * *
11932797 GTTATAAAAGAACTCACAAGTGTTTGAAAAAGTTCCAAAGTTCGTCCAAGAACCAAGAGAGA-TA
64 GTTATAAAAGAACTCGTAAAAGTTTG-ACAAGTT-C-AAGTTCGACAAAGAACCAAGAGAGACT-
** * * * * *
11932861 CAATTCTCTTGTAAATATGTTTTTAACTCAAAGACCAAAAGCTAG-TTAC-AAATTACAACCTAT
125 -AATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGACAAACTAT
* * * * * * * * *
11932924 TTGGACAAAATGGTGCTATTTCTCAAGCATGGAATGGTCAAAAAATTGCTCGATGGAATGGATCA
188 TTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAA-TGCTCGAAGGAATGGATCG
*
11932989 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAG-TTGACAAGTTTGGAAGTT
252 TCTTGAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTT-CAAG-T
* * * * *
11933053 TGTCAAAGAACTATGAGAGATA-ATATTCTCACATAAATAAG-TTTTGATTCAAAGACCAAAAGA
315 T-CCAAA-AACCAAGAGAGATACA-ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-
* * * * *
11933116 TGTTTACAAAATGACATTACAATTTAGACCAAATGATGCGACTTCCCGA
376 TGTTTACAAAATGACA-AACTATTTGGACCAAATGATGCGATTTCTCGA
* * *
11933165 GCATGGAATGTTCGGGAAA-TGTCTCGAAGGAAAGGATTGTCGTGAATACTTTAAGGAACCGAAG
1 GCATGGAATGTTCGAGAAATTG-CTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAG
* * *
11933229 TTATAAAAGAAGTCGTAAAAGTTTGACAAGTTC--G-TC--CTAA-AACGAAGAGAGA-TACAAT
65 TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGACAAAGAACCAAGAGAGACT--AAT
* * *
11933287 TCTCTCCT-AATAAGTTTTTTAATTCAAAGACCAAAAGTAG-TTACAAAATGACAAACTATTTGG
128 TCTCACGTAAATAAG-TTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGG
* * * *
11933350 ACTAAATGATTCAATTTCTCGAGCATGGAATGTTCGAGAAATAGCTTGAAGGAATGGATCGTCTT
192 ACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAAT-GCTCGAAGGAATGGATCGTCTT
** * * * *
11933415 GAATACTTTAAGGAACTAAAGTTATAAAATAACTCTTAAAACTTTGACAAGTTCCAAAGTTCGAC
256 GAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTC-AAGTT---C
* * * *
11933480 CAATAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTTAAAGACCAAAAGCTG-GT
317 CAAAAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TGTTT
* * * *
11933544 AC-AAATGACAACCTATTTGGACCAAGTGATGCAATTTCACGA
381 ACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA
* * * * * *
11933586 GCATGGAATGCTCAAAAAATTGCTCGTAGGAATGGATCGTCTTGAATACTTTAAGGAACCAAAGT
1 GCATGGAATGTTCGAGAAATTGCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGT
* * * *
11933651 TATAAAAGAACTCGTAAAAGTTTGACCATTTCGGAAG-TCGAAAAAGAACCAGGAGAGACTATAT
66 TATAAAAGAACTCGTAAAAGTTTGACAAGTTC--AAGTTCGACAAAGAACCAAGAGAGACTA-AT
*
11933715 TCTCACATAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTGGA
128 TCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGA
* * * *
11933779 CTAAATGATTCGATTTCTCGAGCATGGATTGTTCGAGAAAATAGCTTGAAGGAATGGATCGTCTT
193 CCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAG-AAAT-GCTCGAAGGAATGGATCGTCTT
* * *
11933844 GAATACTTTAAGGGACTGAAGTTATAAAAGAACTCTTAAAAGTTTGACAAGTTTCAAAGTTCAAC
256 GAATACTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTC-AAGTT---C
* * *
11933909 CAAAAACCAAGAGAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAACCTGGTT
317 CAAAAACCAAGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAA-GTGTTT
* ** * *
11933974 AC-AAATGACAACCTGCTCGGACCAAGTGATGCGATTTCTCGA
381 ACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA
* * *
11934016 GCATGGAATGCTCGAAAAATTGCTCGAA-GATACGGATCGTCTTGAATACTTTAAGGAA-CGAAG
1 GCATGGAATGTTCGAGAAATTGCTCGAAGGA-AAGGATCGTCTTGAATACTTTAAGGAACCGAAG
* ** * * * *
11934079 TTATAAAAGAACTCGTAAAATTTTGACCATTTTAGAAGTTCGTCAAAGAACCAGGAGAGATTATA
65 TTATAAAAGAACTCGTAAAAGTTTGA-CAAGTT-CAAGTTCGACAAAGAACCAAGAGAGACTA-A
*
11934144 TTCTCACGTAAATAAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACAATTTG
127 TTCTCACGTAAAT-AAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * *
11934209 GACCCAAATGATGCGACTTC-CGAGCATGGAATGTTTGAGAAATGTCTCGAAAGAAAGGATCGTG
191 GA-CCAAATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATG-CTCGAAGGAATGGATCGTC
*
11934273 TTGAATACTTTAAGGAACCAAAGTTAATAAAAGAACTCGTAAAAGTTTGACAAG-TTC--G-TCC
254 TTGAATACTTTAAGGAACCGAAGTT-ATAAAAGAACTCGTAAAAGTTTGACAAGTTTCAAGTTCC
* * * * * ** * *
11934334 TAGAACCAAAAGAGATATAATTATCATATATATAAAGTCTTTAATTCAAAGACCAAAAGTAGTTT
318 AAAAACCAAGAGAGATACAATTCTCACGTAAAT-AAGTTTTTAATTCAAAGACCAAAAGT-GTTT
* *
11934399 ACAAAATGACAAATTATTTGGACCAAATGATACGATTTCTCGA
381 ACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCTCGA
* * * * * *
11934442 -CTATGGATTATTCGAGAAATAGCTTGAAGGAATGGATCATCTTGAATACTTTAAGGA
1 GC-ATGGAATGTTCGAGAAATTGCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGA
11934499 TTTGATACGA
Statistics
Matches: 2174, Mismatches: 317, Indels: 223
0.80 0.12 0.08
Matches are distributed among these distances:
412 2 0.00
413 58 0.03
414 68 0.03
415 83 0.04
416 42 0.02
417 29 0.01
418 14 0.01
419 21 0.01
420 79 0.04
421 170 0.08
422 263 0.12
423 59 0.03
424 106 0.05
425 54 0.02
426 163 0.07
427 42 0.02
428 132 0.06
429 321 0.15
430 153 0.07
431 226 0.10
432 75 0.03
433 14 0.01
ACGTcount: A:0.40, C:0.14, G:0.18, T:0.28
Consensus pattern (423 bp):
GCATGGAATGTTCGAGAAATTGCTCGAAGGAAAGGATCGTCTTGAATACTTTAAGGAACCGAAGT
TATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAGTTCGACAAAGAACCAAGAGAGACTAATTCT
CACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
AATGATGCGATTTCTCGAGCATGGAATGTTCGAGAAATGCTCGAAGGAATGGATCGTCTTGAATA
CTTTAAGGAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTCAAGTTCCAAAAACCA
AGAGAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTGTTTACAAAATGAC
AAACTATTTGGACCAAATGATGCGATTTCTCGA
Found at i:11943553 original size:217 final size:216
Alignment explanation
Indices: 11935890--11950722 Score: 10040
Period size: 215 Copynumber: 68.8 Consensus size: 216
11935880 ACTCGTATCA
* * * * ** * *
11935890 GAACTGAAGTTACAAAATAACTC-T-AAAGTTTAACAAGTTCCAAAGTTCGACCAAGAACCAACA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * * *
11935953 GACATACAATTCTCATGGAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * * * * * *
11936017 CCTATTTGGACCAAGTGAAGTGATTTCTCTAGCATGGAATGCTCGAAAAATTACTCGAAGAAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
11936082 GATCGTCTTGAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
* * * * * * *
11936103 GAAATCAAAGTTTATAAAAGAAATCGTAAAAGTTTGACCATTTCAGAAGTTCGTCAAAGAACC--
1 G-AACCGAAG-TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAA
* * ** *
11936166 AGGAGAGATTATTCTCACATAAATAAGTTTTTAATTCAAAGACC-AAAGTTGTTTACAAAATGAC
64 AAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC
* * * * * * *
11936230 AAACAATTTGGCCCAAATGATGTGACTTCTCGAGCATGGAATGTTCGAGAAA-TGTCTCGAAAGA
129 AAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTG-CTCGAAGGA
** *
11936294 AAAGATCGTGTGTGGAATACTTTAAG
193 ATGGATCGTCT-T-GAATACTTTAAG
* * ** *
11936320 GAAACGAAGTTATAAAA-AAGCTTGTAAAAGTTTG---A---C--AAGTTCGTCCTTGAA-CAAG
1 GAACCGAAGTTATAAAAGAA-CTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* * * * *
11936375 AGAGATTA-ATTTCTCACATAAATAAG-TTTTAATTCAAAGACAAAAAGTAGTTTACAAAATGAC
65 AGAGA-AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC
* * * *
11936438 AAACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGAAGGAA
129 AAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAA
11936503 TGGATCGTGC-TGAATACTTTAAG
194 TGGATCGT-CTTGAATACTTTAAG
* *
11936526 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTT---AA---C--AA-TTCGTCCTAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * *
11936582 GGGATACAATTCTCACATAAATAAGCTTTTAATTCAAAGACCAAAAGTAGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * * *
11936647 ACTATTTGGACCAAATGATGCAATTTCTCGAGCATGGATTGTTCGAGAAATAGCTTGAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
11936712 GATCGTCTTGAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
* * * * * *
11936733 AAACTGAAGTTATAAAAGAACTCTTAAAAGTTTGACAAGTTTC-AAAGTTCGACCAAGAACCAAG
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTCGGAAGTTCGTCCAAGAACCAAA
** * * *
11936797 AGAGCTACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGCTGGTTAC-AAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* ** *
11936861 ACCTATTTGGACC-AATGATAAGA-TT--CGAGCATGGAATGCTCGAAAAAATTGCTCGAAGGAA
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCG-AAAAATTGCTCGAAGGAA
*
11936922 TGGATCATCTTGAATAC-TTAAG
194 TGGATCGTCTTGAATACTTTAAG
* * * ** * **
11936944 AAACCAAAGTTATAAAAAGAACTCGTAAAAATTTGACAAGTTCTAAAGTTCGTCCTAGAACCAGG
1 GAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* * *
11937009 AGAGATACAATTCACACGTAAATAAGTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGACG
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC-
* * ** *
11937074 AAA-TATTTGGACCAAATGATGCGA-CTCCAGAGCATGGAATGTTCGGGAAATT-CTTCGAAAGA
129 AAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGC-TCGAAGGA
* * *
11937136 AAGAATCGTGTTGAATACTTTAA-
193 ATGGATCGTCTTGAATACTTTAAG
* * *
11937159 GAACCGAAGTTATAAAATAACTCGTAAAAGTTTG---A---C--AAGTTCGTCCTAGAACC-AAG
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * *
11937215 GAGATACACATTCTCACATAAATAAGTTTTTAATTCAAAGACCAAAAGTAGTTTATAAAATGATA
66 GAGAAACA-ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * * * *
11937280 AACTATTTGGACCAAATGATGCAATTTCTCGAGCATGGAATGTTCAAAAAATAGCTTGACGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11937345 GGATCATCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * ** ** *
11937367 GAACTGAAG-TATAAAAAAACTTGTAAAAGTTTGACAAGTTCCAAAGTTCAACCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* ** * * *
11937431 GAGATGA-AATTCTCATTTAAATAAGTTTTTTATTCAAAGACCAAAAGCTGGTTAC-AAATGACA
66 GAGA-AACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * * * * *
11937494 ACCTATTTGGGCCAAATGATACGATTTCTCGAGCATGGAATGCTCGAAAAATTTCTTGAAGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11937559 GGATCATCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* ** ** * * * * **
11937581 GAACCGATGTTATAAAAGAACTCGTAAAAAATTGACAAGTTCTAAATTTCATCCTAGAACTAGGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * *
11937646 GAGATACAATTCACACGTAAATAATTTTTTAATTCAATGACCAAAAGTTGTTTACAAAATGATGA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGA-CA
* * * *
11937711 AA-TATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-ATGAAATTGCTTTGTA-GA
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGA-AAAATTGC-TCGAAGGA
* * * *
11937773 AAGGATCATCTTGAATACTATAAC
193 ATGGATCGTCTTGAATACTTTAAG
* * * * * *
11937797 GAACCGAAGTTATAAAAGAAATCGTAAAAGTTTAACAAGTTTGAAAGTTCATCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
** * * * *
11937862 GAGAAACAATTCTCAATTAAATAAGTTTTTAATTTAAAGACCAAAATTTATTTACAAAA-GACCA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * *
11937926 ACTATTTGGACCAAATGATGCAATTTCCTGAG-ATGGAATGCTCGAAAAACTCCTCGAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
*** * *
11937990 GATAAACATGAATACTTCAAG
196 GATCGTCTTGAATACTTTAAG
** * * *
11938011 GAATTGAAGTTATAAAAAGAACTTGTAAAAGTTTGACAAGTTC---A-----TCCAAGAAACAAG
1 GAACCGAAGTTAT-AAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* ** *
11938068 AGAGATACAATTCTCATTTAAATAAGTTTTTAATTCGAAGACCAAAAGCTT-TTTAC-AAATGAC
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGAC
* * *** * *
11938131 AAACTATTTGTACCAAATGATGCCATTTCTTAAGCATGGAATGCTT-GAAAAATAGCTCGATGGA
129 AAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATG-TTCGAAAAATTGCTCGAAGGA
*
11938195 ATGGATCATCTTGAATA-TTTAAG
193 ATGGATCGTCTTGAATACTTTAAG
* * * * ****
11938218 GAACTGAAGTTATAAAAGAACTCGTTAAAAGTTCGACAAGTTCGAAAGTTCATCCAAGAACTGGG
1 GAACCGAAGTTATAAAAGAACTCG-TAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* * * **
11938283 AGAGATACAGTTCTCACGTAAATAAGTTTTTAAATCAAAGACCAAAAGTTGCATACAAAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
** * * *
11938348 AACTATTTGGACCAAATGATGCGATTTTTTCGACCATGGAATGTTCGAGAAA-TGTCTCGAAAGA
130 AACTATTTGGACCAAATGATGCGA-TTTCCCGAGCATGGAATGTTCGAAAAATTG-CTCGAAGGA
* *
11938412 AAGGATCGTCTTAAATACTTTAAG
193 ATGGATCGTCTTGAATACTTTAAG
* * *
11938436 GAACTGAAGTTATAAACGAACTCGTAAAAGTTTGACAAGTTC---A-----TCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11938493 GAGATACAATTCTCACATAAATAAGTATTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * * *
11938558 ACTATTTGGACAAAATGATGCGATTTCTCGAGCATGGAATGTTCAAAAAATAGCTCAAAAGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
11938623 GATCGTCTTGAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
** * * * *
11938644 GAACTAAATTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAGAAGCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11938709 GAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGGTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * * * * * * *
11938773 ACTATTTGGACCAGATGATGTGACTTCTCGAGCATGG-ATTTCTCAAAAAATAGCTAGAATGATT
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGT-TCGAAAAATTGCTCGAAGGAAT
*
11938837 GGATTGTCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
** * * ** * *
11938859 GAACTAAAGTTATAGAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTTATCCAAGAACCGAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * *
11938924 GAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAAACC-AAAGTTGGTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
** * * * * * *
11938987 ACTATTTGGACCAAATGATGCGATTTCTTGAGAATGGAATGCTCGGAAAATAGCTCTAAGGAATC
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
*
11939052 GATCATCTTGAAATACTTTAAG
196 GATCGTCTTG-AATACTTTAAG
* * * * * * **
11939074 GAACCAAAGTTATAAAAGAACTCGTTAAAGTTTAACAAGTT-TGAATGTTCGTCCAAGGAGCAGG
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAA-GTTCGTCCAAGAACCAAA
* * * * *
11939138 AGAGATACAATTCTCTCGTAAATAAGTTTTTAACTCCAAGACCAAAAGTTGTTTACAAAATGATA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* **
11939203 AACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTCGGGAAA-TGCCTCGAAGGAA
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTG-CTCGAAGGAA
*
11939267 AGGATCGTCTTGAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
* * * *
11939290 GAACTGAAGTTATAAAAGAACTCATATAAGTTTG---A---C--AAGTTCGTCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11939347 GAGATACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAACTTGTTTACAAAATAACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * *
11939412 ACTATTTGGACCAAATAATGCGATTTCCCAAGCATGGAATGTTCGAGAAATTGCTCAAAGGAAAG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
* *
11939477 GATTGTCTTGAATACTTTCAG
196 GATCGTCTTGAATACTTTAAG
* * * **
11939498 GAACTGAAGTTATAAAAGAACTTGTTAAAGTTTGACAAGTTC----G-T-G--CAAGAACCAGGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * * *
11939555 GAGATACAATTCTCATGCAAATAAGTTTTAAATTGAAAGACCAAAATTTGTTTAC--AA-GACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * * ** * *
11939617 AATATTTGGATCAAATTATGCGATTT-TCGAGCTTGGAATGTTCGTGAAATTACTCGAAGGAAAG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
* **
11939681 GATCATCTAAAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
** * * * * *
11939702 GAACTAAAGTTAGAAAAGAACTCGTAAAACTTTGACAAGTTCAGAAGTTCGTCCACGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * *
11939767 GAGATACAATTCTCACGTAAATAAGTTTTT-ATTCGAAGACCAAAAAATT-ATTATAAAATGACA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACAAAATGACA
* * ** ** *
11939830 AACTATTTGAACCAAATGATGCAATTTCTTGAGCATGGAATGTTCGGGAAA-TGTCTCGATGGAA
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTG-CTCGAAGGAA
* * * * *
11939894 AGGGTAGACTTGAATACTTTTAG
194 TGGATCGTCTTGAATACTTTAAG
* * * * * *
11939917 GAATCGAAGTTATAAAAGAACTCATAAAAGTTT-A-AAATT------TTCGACCAGGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * **
11939974 GAGATACTATTCTCACATAAATAAGTTTTTAATTCAAAGACCAAATTTTGATTT-C---ATGACA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTG-TTTACAAAATGACA
* ** * *
11940035 AACTATTTGGACCAAATAATGCGATTTCTTGAGCATGGAATGTTC-ATGAAATTGCTCAAAGG-A
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGA-AAAATTGCTCGAAGGAA
11940098 TGGGATCGTCTTGAATACTTTAAG
194 T-GGATCGTCTTGAATACTTTAAG
* * * *
11940122 GAACCGATGTTATAAAAGAACTTGTAAAAGTTTGAC-AGTTCTGAAGTTCATCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* ** * *
11940186 GAGAAACAATTCTTAATTAAATAAGTTTTTAATTGAAAGACCAAAAGTTGTTTAC-AAATGAAAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * * * * *
11940250 ACTATTTGGACCAGATAATGCAATATCCCGAGCTTGGAATG--CTAAAAATTCCTTGAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
* * *
11940313 GATCATCATAAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
* * * * *
11940334 GAATCGAAGTTATAAAATAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCGTCCAAAAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * *
11940399 GAGATACAATTCTCATGTAAATAAGTTTTTAATTCAAAGATCAAAAGTTGGTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * * * *
11940463 ACTATTTGGACCAAATGATGC-AATTCTCGAGCATGGAATGCTCCAAAAATAGATCAAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
*
11940527 G---GTCTTAAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
* * * * * *
11940545 GAACTGGAGTTGTAAAAGAACTCGTAAAAG-TTGACATGTTCTGAAGTTCGTCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* ** *
11940609 GAGAAACAATTCTTAATTAAATAAG-TTTTAATTTAAAGACCAAAAGTTGTTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * * *
11940672 ACTATTTGGACCAGATAATGTGATTTCCCGAGCATGGAATGCTCGAAAAATTCCTTGAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
* * *
11940737 GATCATCATAAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
* * * *
11940758 GAACCGAAGTTATAAAATAACTCGTAAAAGTTTGACAAGTT-GGAAGTTCGTCTAAAAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * *
11940822 GAGATACAGTTCTCATGTAAATAAGTTTTTAATTCAAAAACCAAAAGTTGGTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * *
11940886 ACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGCTCCG-AAAATAGCTCGAAGGAAT
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATG-TTCGAAAAATTGCTCGAAGGAAT
11940950 GGATCGTCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * *
11940972 GAACTGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGAAAGTTCATCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
** * * *
11941037 GAGTTACAATTCTCATGTAAAATAAGTATTTAATTCAAAGACCAAATGTTGTTTAC-AAATGACA
66 GAGAAACAATTCTCACGT-AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * * * * *
11941101 AACTATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGCTAGAAAAATAGGTTGAAGAAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11941166 GGATCGTCTTGAATACTTTATG
195 GGATCGTCTTGAATACTTTAAG
* * * *
11941188 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGATT-AGAAGTTCATCCAAGAACTAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAG-TTCGGAAGTTCGTCCAAGAACCAAA
* * *
11941252 AGAGATATAATTCTCACGTAAATAAG-TTTTAATTGAAAGACCAAAAGTTGTTTACAAAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * **
11941316 AACTATTTGGACCAAATGATGCGATTTCCCGAGTATGGAATGTTTG-GGAATTGTCTCGAAGGAA
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTG-CTCGAAGGAA
** *
11941380 ACGATCGTCTTGAATACATTAAG
194 TGGATCGTCTTGAATACTTTAAG
** * * * *
11941403 GAATTGAAGTTATAAAAGAACTCATAACAA-TTTTACAAGTTC---A-----TCCAAGAAACAAG
1 GAACCGAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* * * * *
11941459 AGAGATACAATTCTCACATAAATAAGTTTTAAATTCAAAGACCAAAAGTTATTCACAAAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
** * * * *
11941524 AA-TCATTTGGACCAAATGATGCGATTTCTTGAGCATGGAATGTTTGGAAAATAGCTCGAATGAA
130 AACT-ATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAA
*
11941588 TGGATTGTCTTGAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
** * *
11941611 GAATTGAAGTTATAACAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
** **
11941676 GAGAAACAATTCTCAATTAAATAAGTTTTTAATTTGAAGACCAAAAGTTGTTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * *
11941740 ACTACTTGGACCAGATGATGCGATTTCCCGAGCATGGAATGCTCGAAAAATTCCTCGAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
* *
11941805 GATCATCATGAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
* * * **
11941826 ACGAA-CGAAGATATAAAATAACTCGTAAAAG-TT--C-GGTT-----GTTCGTCCAAGAATGAA
1 --GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAA
* * * * * * **
11941881 AAGAGAAATAATTTTGACGTAACTAAGATTTTAATTCCAAGATGAAAAGTTGTTTACAAAATGAC
64 AAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC
* * * ** *
11941946 AAACTATTTGGACCAATTGATGCGATTTCTCGAGCATGGAATGATCG-AAAATAACTCGAAGGCA
129 AAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAA
11942010 TGGATCGTCTTGAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
* * * ** *
11942033 AAAACGAAGTTATAAAAGAACTTGTAAAAGTTTGACAAGTTCAAAAGTTCATCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * * *
11942098 GAGAGACAATTATGACGTAAATAAGTTTTTAATTCAAAGATCGAAAGTTGTTTACAAAATTACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * *
11942163 ACTATATTGGACCAAATGGTGTGATTTCCCGAGCATGGAATGTTC-AGAAAATTGCTTGAAGGAA
131 ACTAT-TTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGA-AAAATTGCTCGAAGGAA
11942227 TGGATCGTCTTGAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
* * * * * **
11942250 CAACCAAATTTATAAAAGAACTCGTAAAAGTTTGACAAGTTTGAAAGTTCGTCCAAGAACCAGGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * *
11942315 GAGACACAATTCTCACGTAAATAAG-TTTTAATTCAATGACCAAAAGTTATTTACCAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * *
11942379 ACTATTTGGACCAAATGATGCGATTTCCCGA-TATTTGAATGTTTGGAAAA-TGTCTCGAAGGAA
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCA-TGGAATGTTCGAAAAATTG-CTCGAAGGAA
* *
11942442 AGGATCGTGTTGAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
*
11942465 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTG---A---C--AAGTTCGTCCAAGAA-CAATG
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAA-A
* * *
11942521 AGAGATACAATTCTCACATAAATAAGTTTTTAATTCAAAGACCAAAAGCTGTTTACAAAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * * * * *
11942586 AACTATTTGGACCAAATAATGTGAATTCCCGAGCATGCAATCTT-TAGGAAATTGCTCGAAGGAA
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGA-AAAATTGCTCGAAGGAA
*
11942650 AGG-TCGTCTTGAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
* * * *
11942672 GAACCGAAGTTATAAATGAACTCGTAAAAGTTTGGCAAGTTTGGAAGTTCGTCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * *
11942737 GAGATACGATTCTCACGTAAATAAGGTTTTAATTCGAAGACCAAAAGTTGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * *** * * *
11942802 ACTATTTGGACCAAATGATGTGATTTCCCGAGCATCGAATGCTCGTGCAATTGCTTGAAGAAAAG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
*
11942867 GATCGTCTTGAATATTATTTATA-
196 GATCGTCTTGAATA--CTTTA-AG
* *
11942890 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACATGTTCGGAAGTTCGTCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* *
11942955 GAGAAACAATTCTTA-GTTAAATAAGTTTTTAATTTAAAGACCAAAAGTTGTTTAC-AAATGACA
66 GAGAAACAATTCTCACG-TAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * * * *
11943018 ATCTATTTGGACCAGATGATGCGATTTCCCGAGCATGGAATGCTCAAAAAATTCCTAGAAGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
* *
11943083 GGATCATCATGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * * *
11943105 GAACCGAAGATATAAAATAACTCGTAAAAGTTTGACAAGTTTGGATGTTTGTCCAAGAACC-AAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11943169 GAGAAACAATTTTGACGTAAAATAAGTTTTTAATTCAAAGACGAAAAGTTGTTTACAAAATGACA
66 GAGAAACAATTCTCACGT-AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * **
11943234 AACTATTTGGACCAAATGATGCGATTTCTCAAGCATGGAATGTTCGGAAAATAACTCGAAGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
11943299 GGATCGTCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* **
11943321 GAAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAAGTTCGTCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * * *
11943386 GAGAGACAATTATGATGTAAATAAGTTTTAAATTCAAAGATCAAAAGTTGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* *
11943451 ACTATTTTGGACCAAATGGTGTGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
131 ACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11943516 GGATCATCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * * * *
11943538 GAATCGAATTTATAAAAGAACTCGTAACAGTTTAACAAGTTCGGAAGTTCATCGAAGAA-CAAAG
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA-
* * *
11943602 AGAGAAACAATTCTCACATAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTAAAAAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * *
11943667 AACTATTTTGGAACAAATGATGCGATTTCCCGATCATTGAACGTTC-AGAAAA-TGTCTC-AGAG
130 AACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGA-AAAATTG-CTCGA-AG
* *
11943729 GAGTGGATCATCTTGAATACTTTAAG
191 GAATGGATCGTCTTGAATACTTTAAG
* * *
11943755 GAACCGAATTTATAAAAGAACTCGTATAAGTTTGACAAGTTCGGAAGTTCGTCCAAAAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11943820 GAGAAACAATTTTGACGTAAAATAAGTTTTTAATTCAAAGACGAAAAGTTGTTTACAAAATGACA
66 GAGAAACAATTCTCACGT-AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * **
11943885 AACTATTTGGACCAAATGATGCGATTTCTCAAGCATGGAATGTTCGGAAAATAACTCGAAGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
11943950 GGATCGTCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* **
11943972 GAAACGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCAAAAGTTCGTCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * * *
11944037 GAGAGACAATTATGATGTAAATAAGTTTTAAATTCAAAGATCAAAAGTTGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* *
11944102 ACTATTTTGGACCAAATGGTGTGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
131 ACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11944167 GGATCATCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * * * *
11944189 GAATCGAATTTATAAAAGAACTCGTAACAGTTTAACAAGTTCGGAAGTTCATCGAAGAA-CAAAG
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA-
* * *
11944253 AGAGAAACAATTCTCACATAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTAAAAAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * *
11944318 AACTATTTTGGAACAAATGATGCGATTTCCCGATCATTGAACGTTC-AGAAAA-TGTCTC-AGAG
130 AACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGA-AAAATTG-CTCGA-AG
* *
11944380 GAGTGGATCATCTTGAATACTTTAAG
191 GAATGGATCGTCTTGAATACTTTAAG
* * *
11944406 GAACCGAATTTATAAAAGAACTCGTATAAGTTTGACAAGTTCGGAAGTTCGTCCAAAAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* *
11944471 GAGAAACAATTTTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * ** *
11944536 ACTATTTGGACC-AATAGATGCGATTTCCTGATCATGGAATGTTTGGGAAATTGCTCGAAGGAAA
131 ACTATTTGGACCAAAT-GATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
* *
11944600 GGATCATCTTTAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * * **
11944622 GAACCAAAGTTATAAAAGAACTCGTAAAAATTTGACAAGTTCGGAAGCTCGTCTAAGAACCATGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * *
11944687 GAGAAAGAATTCTCACTTAAATAAGTTTTTAATTTAAA-ACCAATAGTTGTTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * *
11944750 ATTTTTTGGACCAAGTGATGCTG-TTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
131 ACTATTTGGACCAAATGATGC-GATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
* * *
11944814 GGATCGTCATGAATACTTGAAA
195 GGATCGTCTTGAATACTTTAAG
* * * *
11944836 GAACCAAAGTTATAAAAGAACTCATGAAAGTTTGACAAGTTCAGAAGTTCGTCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11944901 GATAAACAATTTTGACGTAAATAAG-TTTTAATTCAAAGACC-AAA--TGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * ** * *** *
11944962 ACTATTTTGGAACAAATTGATGTGAGCTCGTCCTCGAG-GGGTGATTATGAGTCGCGTGAGTTCC
131 ACTA-TTTGGACCAAA-TGATGCGA--T-TTCC-CGAGCATG-GA--ATG-TTCG-AAAAATT--
* ** * * * *
11945026 CGATCGAAATTAAAAAGTATCGT-TCGTAATGGA-TTT-CG
183 -GCTCG-AA--GGAATGGATCGTCTTG-AAT--ACTTTAAG
** * * * ** * * * * * **
11945064 TG-A-CG--GTTGGAAATGATAATGGT--GGGTTGTAGA-AGGAT-GGATGGATGGATGGATATG
1 -GAACCGAAGTTATAAAAGA-ACTCGTAAAAGTT-T-GACAAGTTCGGA-AGTTCG-TCCA-A-G
** ** ** * * * * * * *
11945121 TAATGGATATAA-AGAAGGATAGGCT--TG-AACT-CGATTTAAGGACTCAAGAATGAACCAATA
58 -AA-CCA-A-AAGAGAAACA-ATTCTCACGTAAATAAGTTTTTA--ATTC-A-AA-G-ACCAAAA
* * * ** ** * * ** *
11945181 --T-TATAGAAGAAT-ACTAACCCGATTCCTATATTAGTTCTTA-GA-ACGAATTGCAAGTAAGA
112 GTTGTTTACAA-AATGAC-AA----A---CTAT-TTGGACCAAATGATGCG-ATTTCCCG--AGC
* * * * * ** * * ** *
11945240 ACCGTGACCCTCTATCTAGAAAGATAG---GAACCAATCAGTATAAG-GGTGAACGTCACACTTC
164 A-TG-GA--ATGT-TC--GAAAAATTGCTCGAAGGAAT--GGAT-CGTCTTGAA--T---ACTTT
*
11945301 AAT
214 AAG
** * * *
11945304 GAAGTGATAAGTT-TGAAAGAA-TCAGATTGACGCCATAAGGGTTACTTGATAAG-TC--AATTT
1 GAACCG--AAGTTATAAAAGAACTC-G--T-A----A-AA--G-T--TTGACAAGTTCGGAAGTT
* * * * ** * * * ** *
11945364 GAGTCAAATAA-GAACAAGGAGTTTATAA-ACTCAC---AATAAGATTAAAATTC----ATCAAA
50 -CGTCCAAGAACCAA-AA-GAG-AAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAA
* * * * ****
11945420 AGGTT-TTTAACAAAATGTTGCAAGCCTCATATTTATAGG-CTTACAAATGA--CCAGTTGAAAA
111 A-GTTGTTT-ACAAAATG--ACAA---AC-TA-TT-T-GGAC---CAAATGATGCGATTTCCCGA
* * * ** * * * * * ***
11945481 GTGATGAAATAATTAAACAAAATTACACCATA--AAT---TCGTC--CAAGA-TTCCCCG
162 G-CATGGAAT-GTTCGA-AAAATTGCTCGA-AGGAATGGATCGTCTTGAATACTT-TAAG
**** ** ** ** * ** * * * * **
11945533 TGCATTTTAAGTTA-ATATGGTGGCT-GCTTCAA--TGGAGTAGTTGGCTGAATTTAGTGCTTGA
1 -G-AACCGAAGTTATA-AAAG-AACTCG-TAAAAGTTTGACAAGTT--CGGAAGTTCGTCCAAGA
****** * ** ** ** * * * *
11945594 TTGGCTAG-GAAGA-AGTGT-TC-TTTAAATTCG-ACTGAAGTTCCCATGCACTTGGAATAAATG
59 ACCAAAAGAGAA-ACAAT-TCTCACGTAAATAAGTTTTTAA-TT-CAAAG-AC----CA-AAA-G
* * * * * ** ** * * * ***
11945654 TGGGTGGTGCATCAATG----A-T-TTTTGAGTAACCCGA-AC-A---GCC--GCTTTTCATGTT
113 T-TGT-TTACA-AAATGACAAACTATTTGGACCAA-ATGATGCGATTTCCCGAGCATGGAATGTT
** ** * * * ** * * * * *
11945706 CCCATTATCAGCCTTTG-A-GCATTTA-AGTACCT-CA-CCTTTGATG
174 CGAAAAAT-TG-C-TCGAAGGAATGGATCGT-CTTGAATACTTT-AAG
* *** * * * ** **** *
11945749 AAACC-AA-TTAGCCATGCA-T-GAAGACAACATTG--AA-TTCCTTTGCT-GATCACGAA-ATG
1 GAACCGAAGTTATAAAAGAACTCGTA-A-AAGTTTGACAAGTTCGGAAGTTCG-TC-C-AAGA--
* **** * ** * ** * *** * ** *
11945805 CCCTTTTG-GAGA-AATT-AAACAT-GCT-GGTTAGGACATATTAAATGGGCAACAA-TAT-TTG
59 ACCAAAAGAGAAACAATTCTCACGTAAATAAGTTTTTA-AT-TCAAA-GACCAA-AAGT-TGTTT
* * * * ***** * *** ** *
11945863 ACTAAAACTAAC-AACTAATCTTAGGA-CAAATTTAAAGACTTATTAAAATAACACAAAACATAC
119 AC-AAAA-TGACAAACT-AT-TT-GGACCAAA--TGATG-C-GATTTCCCGAGCATGGAATGTTC
* * ** * ** ** * * *
11945926 TTAAGACATAAACT-AAAATAACTAAAT-G-GTT-AATTCTTT-AT
175 -GAA-AAAT-TGCTCGAAGGAA-TGGATCGTCTTGAATACTTTAAG
*** * * * *
11945967 TTTCCAGCAA-TT-TAATTAG-A-T--TAAAA--TT-A-AA-TT--GAATGTGCAG-CACATTGC
1 GAACC-G-AAGTTATAA-AAGAACTCGTAAAAGTTTGACAAGTTCGGAA-GTTC-GTC-CA-AGA
*** * ** * * ** * * * *
11946018 ATGGAATGCATG--ACGGGTTGT-ATG-AAATGAA---TGGAATGCATGAAGTGTCTTCCAAATT
59 ACCAAAAG-A-GAAAC-AATTCTCACGTAAAT-AAGTTTTTAATTCA--AA--GAC--CAAAAGT
* * ** ** ** * * *
11946076 TCATTTA-ATTAAACCCGTAACAGCCTGA-TT-GA--ATTTCTTG-GCTTGTGCTC--G--TGTA
114 T-GTTTACA--AAA----TGACAAACT-ATTTGGACCAAATGATGCGATT-T-CCCGAGCATGGA
* *** ** * * * *
11946131 ATTGGTCCTCTAGGTAGCTCGATTA-GATAGTGCGA--GGCTT---TCCCTT---
169 A-T-GTTCGAAAAATTGCTCGA--AGGA-A-TG-GATCGTCTTGAATACTTTAAG
* * * * ** * * * * * * * *
11946177 CATCC-ATGCTAGCAATGCGAGT-GTTCACAA-TAT--CAGTGTTCGCATTGTGTCTGTCC--GC
1 GAACCGAAGTTATAAAAG-AACTCG-T-AAAAGTTTGACA-AGTTCGGA-AGT-TC-GTCCAAG-
** * ** * * * * * * * * *
11946235 AA-CATGAGGGTTTGTAGCTCTAGTGT-TCGCAACATGAG-TGTT--TGC--AG-CTC--CAG-T
58 AACCA--AAAG--AG-A-AACAATTCTCACGTAA-ATAAGTTTTTAATTCAAAGAC-CAAAAGTT
* * *** ****** * * * ** * *
11946289 GTTTGCAACATGA-TTGCTCGCAATA-CTAGTGCT-CGCATCTTCCAAGCTCGCAAGGTCCATGC
115 GTTTACAAAATGACAAACTATTTGGACCAAATGATGCG-AT-TTCC---CGAGCATGG--AATG-
** * * ** * * ***
11946351 TCTC-ATTATTAGTGTTC-ATACTACTCGTACTCGCATCACCAATGATGCAATTTCCCAA-
172 T-TCGA--AAAATTGCTCGA-AGGAAT-GGA-TCG--TCTTGAAT-A--C--TTT---AAG
* ** * * * * * * ** *
11946409 GCATGGAATGTT-CAAAA-AA-TTGCTCAAAGGAATGGATC--G-TCTTGAA-CAC-TCTAAGGA
1 GAACCGAA-GTTATAAAAGAACTCG-T-AAAAG-TTTGA-CAAGTTC-GGAAGTTCGTCCAA-GA
* * * * ** ** **
11946466 ATC-AAAGTTATAAA-AGA-ACT--CGT-AAT-AG--TTTGA--C-AAGTTCGGAAGTTCGTCCA
59 ACCAAAAG--AGAAACA-ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTT-GT-TT
* * * * * * * * *** *** * *
11946519 AGAACCAAGAGAGAAACAATTCT-CACTTAACTAAGTTTTTAATTTAAAGACCA--AAAGTTGTT
119 ACAA--AA-TGACAAACTATT-TGGAC-CAA--ATG-ATGCGATTTCCCGAGCATGGAA--TGTT
* * * * ** * * * ** *
11946581 -TACAAA-TG-ACAAACCACTTGGACCAAATGATGCAAT--TTCT-CG
174 CGAAAAATTGCTCGAAGGA-ATGGATC--GTCTTG-AATACTT-TAAG
* ** * * * * * * ** * **
11946623 AGCATGGAA--TATTCAAAA-AATTACTTGAAGGAATGGATCATCTT--GAA-TAC-TTTAAGGA
1 -GAACCGAAGTTA-T-AAAAGAACT-CGTAAAAG-TTTGA-CAAGTTCGGAAGTTCGTCCAA-GA
* * * * * * * * ** * *** *
11946681 ATCGAGAGTTATAAAAGAACTTGTAAAAGTTTGACAAGTTCGAAAGTTCATCCAAGGACCAATAG
59 ACCAAAAG--A-GAAACAA-TTCT-CACG-TAAATAAGTTTTTAA-TTCA---AA-GACCAAAAG
* ** ** ** * * ** ***
11946746 -AG-AAACAATTCTGACGTAAA-TAAGTTTTAAATTCAAATACCAAAACTTG-TTTACAAAATG-
113 TTGTTTACAA-AATGAC--AAACT-A--TTTGGA-CCAAAT---GATGC--GATTT-CCCGA-GC
** * * *
11946806 ATAAACCAT-TTGGACCAAATGATGTGATTTCTCG-A-GCATGGAAT-GT-TTGGAAAATGGCTT
164 ATGGA--ATGTTCGA--AAA--AT-TG----CTCGAAGGAATGG-ATCGTCTT-G--AAT-ACTT
*
11946866 GAAG
213 TAAG
** * * * * * *
11946870 GAATGGATCGTCATGAATACTTTAAGGAAC-CAAAGTTATAAAAGAACTCCT-AAAAGTTTGACA
1 GAACCGA-AGT--T--ATA----AAAGAACTC---G---TAAAAG---T-TTGACAAGTTCG-GA
* *
11946933 AGTTCGGAAGTTCATCCAAGAACCAAAAGAGAAACAATTCTGACATAAATAAGTTTTTAATTCAA
46 AGTTC----G----TCCAAGAACCAAAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAA
* *
11946998 AGACCAAAAGTTGTTTACAAAATGACAAACTATTTTGGACCAAATGATACGATTTCCCAAGCATG
103 AGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATG
* * * * * * * *
11947063 GAATGCTCAAAAAATTACTCAAACGAAAGTATCGTTTTGAATACTTTAAG
167 GAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAATACTTTAAG
* * * * *
11947113 GAATCGAAGTTATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCACGAACCAAA
1 GAACCGAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* * * * * *
11947177 AGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACAAAAAGATGTTTAC-AAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * *
11947241 AACTATTTGGACCGAATGATGCGATTTCCCAAGCATGGAATGTTCGAGAAATTGCTCGAAGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11947306 AGATCGTCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * ** *
11947328 GATCCAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCAAAAGTTCGTCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * *
11947393 GAGAAACGATTCTCACTTAAATAAGTTTTAAATTTAAAGACC-AAAGTTGTTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * **
11947456 ACTATTTGGACCAAATGATGCAATTTCCCAAGCATGGAATGTTCCTAAAATTGCTCGAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
*
11947521 GATCGTCTTGAAT--GTT-AG
196 GATCGTCTTGAATACTTTAAG
* * * **
11947539 GAACCAAAGTTATAAAAGAACTCGAAAAAGTTTCACAAGTTCATAAGTTCGTCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACC-AAA
* * * *
11947604 AAAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTTTTTTACAAAATGAC
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTACAAAATGAC
* * *
11947669 AAACCATTTGGACCAAATGATGCGATTTCTCGAGCATGGAATGTTC-AGAAAATGGCTCGAAGGA
129 AAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGA-AAAATTGCTCGAAGGA
*
11947733 ATGGATCGTCATGAATACTTTAAG
193 ATGGATCGTCTTGAATACTTTAAG
* * *
11947757 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTCGACAAGTTCGGAAGTTCATCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* *
11947822 GAGAAATAATTCTGACGTAAATAAG-TTTTAATTCAAAGACCAAAAAGTTGTTTACAAAATGACA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACAAAATGACA
* *
11947886 AACTATTTTGGACCAAATGATGCGATTT-CCGAGCATGGAATGCTCGAAAAATTGCTCAAAGGAA
130 AACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAA
* *
11947950 TGGATCGTTTTGAATACTTTAAA
194 TGGATCGTCTTGAATACTTTAAG
* * * *
11947973 GAATCGAAGTTATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCAAGAACCAAA
1 GAACCGAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* * * * *
11948037 AGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTAC-AAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
** * *
11948101 AACTATTTGGACCAAATGATGCGATTTCCTAAACATGGAATGTTC-AAAAATTGCTCGATGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11948165 GGATCGTCTGGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * **
11948187 GAACCAAAGTTATAAAAGAACTTGTAAAAGTTTCG-CAAGTTCATAAGTTCGTCCAAGAACCAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTT-GACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* *
11948251 AGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * * *
11948316 AACCATTTGGATCAAATGATGCGATTTCCCGAGCATGGAATGCTCGGAAAATGGCTCGAAGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
* * * *
11948381 TGATCATCATGAATGCTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * *
11948403 GAACCAAAGTTATAAAA-AACTCGTAAAATTTTGATAAGTTCGAAAGTTCGTCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * *
11948467 GAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAAACCAAAAAGTTGTTTACAAAAAGGCA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACAAAATGACA
* * * * * *
11948532 AACTATTTTTGACCAAATGATGCGATTT-CCAAGCATGGAAT-CTCGAAAAATTACTCAAATGAA
130 AACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAA
* * *
11948595 TGGATCATTTTAAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
* * * *
11948618 GAATCGAAGTTATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCAAGAACCAAA
1 GAACCGAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* * * *
11948682 AGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAGTTGTTTAC-AAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* *
11948746 AACTATTTGGACCGAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11948811 AGATCGTCTTGAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * ** *
11948833 GAGCCAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCATAAGTTCGTCCAAGAACAAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11948898 GAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAATTTGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * * * *
11948963 ACCATTTGGACCAAATGATGCGATTTCTCGAGCGTGGAATGTTCAAAAAATGGCTCGAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
*
11949028 GATCGTCATGAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
*
11949049 GAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACC-AAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
*
11949113 GAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAAGTTGTTTACAAAATGACA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACAAAATGACA
* * * * *
11949178 AACTATTTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGGTCG-AAAATTTCTCAAAGGAG
130 AACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAA
*
11949242 TGGATCGTTTTGAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
* * * * *
11949265 GAATCGAAGTTATAAAAGAACTTGTAACAA-TTTGACAAGCTCGTAAGTTCATCCAAGAACCAAA
1 GAACCGAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAA
* * * * *
11949329 AGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTAC-AAATGACA
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* *
11949393 AACCATTTGGACCAAATGATGCGATTTCCCAAGCATGGAATGTTC-AAACAATTGCTCGAAGGAA
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAA-AATTGCTCGAAGGAA
* *
11949457 AGGATCG-CATTTAATACTTTAAG
194 TGGATCGTC-TTGAATACTTTAAG
** *
11949480 GAATAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * * * * * *
11949545 GAGAAACGATTCTCACTTTAACAAGTTTTAAATTTAAAGACC-AAAGTTGTTTAC-AAGTGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
*
11949608 ACTATTTGGACCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
11949673 GATCGTCTTGAATACTTTAAG
196 GATCGTCTTGAATACTTTAAG
** * **
11949694 GAACTAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCATAAGTTCGTCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* *
11949759 GAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
* * *
11949824 ACCATTTGGACCAAATGATGCGATTTTCCGAGCATGGAATGTTCAGAAAAA-GGCTCGAAGGAAT
131 ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTC-GAAAAATTGCTCGAAGGAAT
* * *
11949888 GAATCGTCATGAATACTTTAAA
195 GGATCGTCTTGAATACTTTAAG
* *
11949910 GAACCAAAGTTATAAAAGAACTCATAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11949975 GAGAAACAATTCTGACGTAAATAAGGTTTTAATTCAAAGACCAAAAAGTTCTTTACAAAATGACA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACAAAATGACA
** * * *
11950040 AACTATATTGCTCCAAATGATGCGATTTCCCGAGCATGGAATGCTCGAAAATTTGCTCAAAGGAA
130 AACTAT-TTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAA
* *
11950105 TGGATCATTTTGAATACTTTAAG
194 TGGATCGTCTTGAATACTTTAAG
* * *
11950128 GAATCAAAGTTATAAAAGAACTCGT---A-----ACAA--T---AAGTTCATCCAAGAACCAAAA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
* * *
11950180 GAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAGACCAAAAGTTGTTTAC-AAATGACAA
66 GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
*
11950244 ACTATTTGGACCAAATGATGCGATTT-TCGAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
131 ACTATTTGGACCAAATGATGCGATTTCCCG-AGCATGGAATGTTCGAAAAATTGCTCGAAGGAAT
*
11950308 GGATCGTCTTTAATACTTTAAG
195 GGATCGTCTTGAATACTTTAAG
* * * * *
11950330 GAACTGAAGTTATAAAAGAACTCATAAAATTTTGACAAGTTCAGAAGTTCGTCCAGGAACCAACA
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAA-A
* *
11950395 A-AGAATCAATTCTAACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC-
65 AGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACA
* * * *
11950458 -ATTATTTGGACCAATTGATGCAATTTCCCGAGCATGGAATGTTCAGGAAATCATT--T-GAAGG
130 AACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTC--GAAA-AATTGCTCGAAGG
* * *
11950519 AAAGGATTGTCTTTAATACTTTAAG
192 AATGGATCGTCTTGAATACTTTAAG
* *
11950544 GAACCAAAGTTATAAAA-AAATCGTAAAAGTTTGACAAGTAGGTTTGACAAGTTCAGAAGTTCGT
1 GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGAC-A--A-G-TT--C--G----GAAGTTCGT
* * * * *
11950608 CCAAGAACCTAAAGAG--A-AATTCTCACTTAAATAAGTTTTTAATTTAAAAACCAATAGTTGTT
53 CCAAGAACCAAAAGAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTT
* * * **
11950670 TATAAAATGACAAATTATTTGGACCAAATGATGTGATTTCTTGAGCATGGAAT
118 TACAAAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAAT
11950723 CAATTCACAT
Statistics
Matches: 11741, Mismatches: 2072, Indels: 1602
0.76 0.13 0.10
Matches are distributed among these distances:
201 5 0.00
202 93 0.01
203 15 0.00
204 99 0.01
205 222 0.02
206 207 0.02
207 650 0.06
208 775 0.07
209 179 0.02
210 132 0.01
211 180 0.02
212 384 0.03
213 297 0.03
214 1357 0.12
215 2375 0.20
216 2029 0.17
217 1533 0.13
218 366 0.03
219 33 0.00
220 31 0.00
221 31 0.00
222 18 0.00
223 76 0.01
224 15 0.00
225 70 0.01
226 40 0.00
227 10 0.00
228 24 0.00
229 29 0.00
230 17 0.00
231 34 0.00
232 11 0.00
233 18 0.00
234 24 0.00
235 31 0.00
236 15 0.00
237 6 0.00
238 6 0.00
239 14 0.00
240 11 0.00
241 17 0.00
242 11 0.00
243 39 0.00
244 19 0.00
245 16 0.00
246 17 0.00
247 8 0.00
248 8 0.00
249 8 0.00
250 9 0.00
251 8 0.00
252 3 0.00
253 5 0.00
254 11 0.00
255 8 0.00
256 9 0.00
257 3 0.00
258 1 0.00
259 5 0.00
260 9 0.00
261 7 0.00
262 10 0.00
263 7 0.00
264 6 0.00
265 2 0.00
266 4 0.00
267 9 0.00
268 1 0.00
269 3 0.00
270 5 0.00
271 1 0.00
273 7 0.00
274 3 0.00
ACGTcount: A:0.40, C:0.15, G:0.18, T:0.28
Consensus pattern (216 bp):
GAACCGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAAA
GAGAAACAATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAA
ACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATG
GATCGTCTTGAATACTTTAAG
Found at i:11946268 original size:30 final size:30
Alignment explanation
Indices: 11946232--11946301 Score: 104
Period size: 30 Copynumber: 2.3 Consensus size: 30
11946222 TGTGTCTGTC
* *
11946232 CGCAACATGAGGGTTTGTAGCTCTAGTGTT
1 CGCAACATGAGGGTTTGCAGCTCCAGTGTT
*
11946262 CGCAACATGAGTGTTTGCAGCTCCAGTGTT
1 CGCAACATGAGGGTTTGCAGCTCCAGTGTT
*
11946292 TGCAACATGA
1 CGCAACATGA
11946302 TTGCTCGCAA
Statistics
Matches: 36, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
30 36 1.00
ACGTcount: A:0.23, C:0.20, G:0.27, T:0.30
Consensus pattern (30 bp):
CGCAACATGAGGGTTTGCAGCTCCAGTGTT
Found at i:11947409 original size:215 final size:216
Alignment explanation
Indices: 11946391--11950709 Score: 5542
Period size: 216 Copynumber: 20.1 Consensus size: 216
11946381 TCGCATCACC
* * * *
11946391 AATGATGCAATTTCCCAAGCATGGAATGTTCAAAAAATTGCTCAAAGGAATGGATCGTCTTGAAC
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * *
11946456 ACTCTAAGGAATCAAAGTTATAAAAGAACTCGTAATAGTTTGACAAGTTCGGAAGTTCGTCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
* * * * *
11946521 AACCAAGAGAGAAACAATTCTCACTTAACTAAGTTTTTAATTTAAAGACCAAAAGTTGTTTAC-A
131 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
* *
11946585 AATGACAAACCACTTGGACCA
196 AATGACAAACTATTTGGACCA
* * * * * * * *
11946606 AATGATGCAATTTCTCGAGCATGGAATATTCAAAAAATTACTTGAAGGAATGGATCATCTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * * * *
11946671 ACTTTAAGGAATCGAGAGTTATAAAAGAACTTGTAAAAGTTTGACAAGTTCGAAAGTTCATCCAA
66 ACTTTAAGGAA-CCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAA
* * * * *
11946736 GGACCAATAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAATACCAAAACTTGTTTACA
130 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
* *
11946801 AAATGATAAACCATTTGGACCA
195 AAATGACAAACTATTTGGACCA
* * * * * * * *
11946823 AATGATGTGATTTCTCGAGCATGGAATGTTTGGAAAATGGCTTGAAGGAATGGATCGTCATGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* *
11946888 ACTTTAAGGAACCAAAGTTATAAAAGAACTCCTAAAAGTTTGACAAGTTCGGAAGTTCATCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
*
11946953 AACCAAAAGAGAAACAATTCTGACATAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
131 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
11947018 AATGACAAACTATTTTGGACCA
196 AATGACAAACTA-TTTGGACCA
* * * * * * * * *
11947040 AATGATACGATTTCCCAAGCATGGAATGCTCAAAAAATTACTCAAACGAAAGTATCGTTTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * * * * *
11947105 ACTTTAAGGAATCGAAGTTATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCAC
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAA
* * * * * * *
11947169 GAACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACAAAAAGATGTTTAC-
130 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
*
11947233 AAATGACAAACTATTTGGACCG
195 AAATGACAAACTATTTGGACCA
* *
11947255 AATGATGCGATTTCCCAAGCATGGAATGTTCGAGAAATTGCTCGAAGGAATAGATCGTCTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * **
11947320 ACTTTAAGGATCCAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCAAAAGTTCGTCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
* * * * * *
11947385 AACCAAGAGAGAAACGATTCTCACTTAAATAAGTTTTAAATTTAAAGACC-AAAGTTGTTTAC-A
131 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
11947448 AATGACAAACTATTTGGACCA
196 AATGACAAACTATTTGGACCA
* **
11947469 AATGATGCAATTTCCCAAGCATGGAATGTTCCTAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * * **
11947534 --GTT-AGGAACCAAAGTTATAAAAGAACTCGAAAAAGTTTCACAAGTTCATAAGTTCGTCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
* * *
11947596 AACCAAAAAAAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTTTTTTAC
131 AACC-AAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAG-TTGTTTAC
*
11947661 AAAATGACAAACCATTTGGACCA
194 AAAATGACAAACTATTTGGACCA
* * * *
11947684 AATGATGCGATTTCTCGAGCATGGAATGTTC-AGAAAATGGCTCGAAGGAATGGATCGTCATGAA
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGA-AAAATTGCTCGAAGGAATGGATCGTCTTGAA
* *
11947748 TACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTCGACAAGTTCGGAAGTTCATCCAA
65 TACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAA
*
11947813 GAACCAAAAGAGAAATAATTCTGACGTAAATAAG-TTTTAATTCAAAGACCAAAAAGTTGTTTAC
130 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTAC
11947877 AAAATGACAAACTATTTTGGACCA
194 AAAATGACAAACTA-TTTGGACCA
* * * *
11947901 AATGATGCGATTT-CCGAGCATGGAATGCTCGAAAAATTGCTCAAAGGAATGGATCGTTTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * * * * *
11947965 ACTTTAAAGAATCGAAGTTATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCAA
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAA
* * * * * *
11948029 GAACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTAC-
130 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
11948093 AAATGACAAACTATTTGGACCA
195 AAATGACAAACTATTTGGACCA
* * * *
11948115 AATGATGCGATTTCCTAAACATGGAATGTTC-AAAAATTGCTCGATGGAATGGATCGTCTGGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* **
11948179 ACTTTAAGGAACCAAAGTTATAAAAGAACTTGTAAAAGTTTCG-CAAGTTCATAAGTTCGTCCAA
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTT-GACAAGTTCGGAAGTTCGTCCAA
*
11948243 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACA
130 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
* *
11948308 AAATGACAAACCATTTGGATCA
195 AAATGACAAACTATTTGGACCA
* * * * * * *
11948330 AATGATGCGATTTCCCGAGCATGGAATGCTCGGAAAATGGCTCGAAGGAATTGATCATCATGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * * *
11948395 GCTTTAAGGAACCAAAGTTATAAAA-AACTCGTAAAATTTTGATAAGTTCGAAAGTTCGTCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
*
11948459 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAAACCAAAAAGTTGTTTACA
131 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACA
* * *
11948524 AAAAGGCAAACTATTTTTGACCA
195 AAATGACAAACTA-TTTGGACCA
* * * * * * *
11948547 AATGATGCGATTT-CCAAGCATGGAAT-CTCGAAAAATTACTCAAATGAATGGATCATTTTAAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * * * *
11948610 ACTTTAAGGAATCGAAGTTATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCAA
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAA
* * * * *
11948674 GAACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAGTTGTTTAC-
130 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
*
11948738 AAATGACAAACTATTTGGACCG
195 AAATGACAAACTATTTGGACCA
*
11948760 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATAGATCGTCTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * **
11948825 ACTTTAAGGAGCCAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCATAAGTTCGTCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
* * *
11948890 AACAAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAATTTGTTTACAA
131 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
*
11948955 AATGACAAACCATTTGGACCA
196 AATGACAAACTATTTGGACCA
* * * * * *
11948976 AATGATGCGATTTCTCGAGCGTGGAATGTTCAAAAAATGGCTCGAAGGAATGGATCGTCATGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
11949041 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
11949106 AACC-AAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAAGTTGTTTACA
131 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACA
*
11949170 AAATGACAAACTATTTTAGACCA
195 AAATGACAAACTA-TTTGGACCA
* * * * * *
11949193 AATGATGCGATTTCCCGAGCATGGAATGGTCG-AAAATTTCTCAAAGGAGTGGATCGTTTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * * * * *
11949257 ACTTTAAGGAATCGAAGTTATAAAAGAACTTGTAACAA-TTTGACAAGCTCGTAAGTTCATCCAA
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCGTCCAA
* * * * * *
11949321 GAACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTAC-
130 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
*
11949385 AAATGACAAACCATTTGGACCA
195 AAATGACAAACTATTTGGACCA
* *
11949407 AATGATGCGATTTCCCAAGCATGGAATGTTC-AAACAATTGCTCGAAGGAAAGGATCG-CATTTA
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAA-AATTGCTCGAAGGAATGGATCGTC-TTGA
*
11949470 ATACTTTAAGGAA-TAGAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCC
64 ATACTTTAAGGAACCA-AAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCC
* * * * * * * *
11949534 AAGAACCAAGAGAGAAACGATTCTCACTTTAACAAGTTTTAAATTTAAAGACC-AAAGTTGTTTA
128 AAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTA
*
11949598 C-AAGTGACAAACTATTTGGACCA
193 CAAAATGACAAACTATTTGGACCA
11949621 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* * **
11949686 ACTTTAAGGAACTAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCATAAGTTCGTCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
*
11949751 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACAA
131 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
*
11949816 AATGACAAACCATTTGGACCA
196 AATGACAAACTATTTGGACCA
* * * * *
11949837 AATGATGCGATTTTCCGAGCATGGAATGTTCAGAAAAA-GGCTCGAAGGAATGAATCGTCATGAA
1 AATGATGCGATTTCCCAAGCATGGAATGTTC-GAAAAATTGCTCGAAGGAATGGATCGTCTTGAA
* *
11949901 TACTTTAAAGAACCAAAGTTATAAAAGAACTCATAAAAGTTTGACAAGTTCGGAAGTTCGTCCAA
65 TACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAA
* *
11949966 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGGTTTTAATTCAAAGACCAAAAAGTTCTTTAC
130 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTAC
**
11950031 AAAATGACAAACTATATTGCTCCA
194 AAAATGACAAACTAT-TTGGACCA
* * * * * *
11950055 AATGATGCGATTTCCCGAGCATGGAATGCTCGAAAATTTGCTCAAAGGAATGGATCATTTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
* *
11950120 ACTTTAAGGAATCAAAGTTATAAAAGAACTCGT---A-----ACAA--T---AAGTTCATCCAAG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
* * * *
11950172 AACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAGACCAAAAGTTGTTTAC-A
131 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
11950236 AATGACAAACTATTTGGACCA
196 AATGACAAACTATTTGGACCA
* * *
11950257 AATGATGCGATTTTCGAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTTAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
** * * * *
11950322 ACTTTAAGGAACTGAAGTTATAAAAGAACTCATAAAATTTTGACAAGTTCAGAAGTTCGTCCAGG
66 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
* *
11950387 AACCAACAA-AGAATCAATTCTAACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
131 AACCAA-AAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACA
*
11950451 AAATGAC--ATTATTTGGACCA
195 AAATGACAAACTATTTGGACCA
* * * * * * *
11950471 ATTGATGCAATTTCCCGAGCATGGAATGTTCAGGAAATCATT--T-GAAGGAAAGGATTGTCTTT
1 AATGATGCGATTTCCCAAGCATGGAATGTTC--GAAA-AATTGCTCGAAGGAATGGATCGTCTTG
*
11950533 AATACTTTAAGGAACCAAAGTTATAAAA-AAATCGTAAAAGTTTGACAAGTAGGTTTGACAAGTT
63 AATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAC-A--A-G-TT--C--G--
* * * * *
11950597 CAGAAGTTCGTCCAAGAACCTAAAGAG--A-AATTCTCACTTAAATAAGTTTTTAATTTAAAAAC
117 --GAAGTTCGTCCAAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGAC
* * *
11950659 CAATAGTTGTTTATAAAATGACAAATTATTTGGACCA
180 CAAAAGTTGTTTACAAAATGACAAACTATTTGGACCA
*
11950696 AATGATGTGATTTC
1 AATGATGCGATTTC
11950710 TTGAGCATGG
Statistics
Matches: 3596, Mismatches: 424, Indels: 158
0.86 0.10 0.04
Matches are distributed among these distances:
202 91 0.03
203 14 0.00
204 12 0.00
205 58 0.02
208 1 0.00
210 8 0.00
211 60 0.02
212 43 0.01
213 41 0.01
214 601 0.17
215 924 0.26
216 1030 0.29
217 469 0.13
218 147 0.04
220 1 0.00
223 50 0.01
225 26 0.01
226 20 0.01
ACGTcount: A:0.41, C:0.15, G:0.17, T:0.27
Consensus pattern (216 bp):
AATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTGAAT
ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAA
AATGACAAACTATTTGGACCA
Found at i:11948353 original size:861 final size:860
Alignment explanation
Indices: 11946391--11950709 Score: 5564
Period size: 861 Copynumber: 5.0 Consensus size: 860
11946381 TCGCATCACC
* * *
11946391 AATGATGCAATTTCCCAAGCATGGAATGTTCAAAAAATTGCTCAAAGGAATGGATCGTCTTGAAC
1 AATGATGCGATTTCCCAAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTC-TGAAT
* * *
11946456 ACTCTAAGGAATCAAAGTTATAAAAGAACTCGTAATAGTTTGACAAGTTCGGAAGTTCGTCCAAG
65 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
* * * * * *
11946521 AACCAAGAGAGAAACAATTCTCACTTAACTAAGTTTTTAATTTAAAGACCAAAAGTTGTTTAC-A
130 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACAA
* * * * ** ** * *
11946585 AATGACAAACCACTTGGACCAAATGATGCAATTTCTCGAGCATGGAATATTCAAAAAATTACTTG
195 AATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGCTCCGAAAATTGCTCG
* * * *
11946650 AAGGAATGGATCATCTTGAATACTTTAAGGAATCGAGAGTTATAAAAGAACTTGTAAAAGTTTGA
260 AAGGAATGGATCATCTTGAATA-TTTAAGGAA-CCAAAGTTATAAAAGAACTCGAAAAAGTTTGA
* * *
11946715 CAAGTTCGA-AAGTTCATCCAAGGACCAATAGAGAAACAATTCTGACGTAAATAAGTTTTAAATT
323 CAAGTTC-ATAAGTTCATCCAAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATT
* * * *
11946779 CAAATACCAAAACTTGTTTACAAAATGATAAACCATTTGGACCAAATGATGTGATTTCTCGAGCA
387 CAAAAACCAAAAGTTGTTTACAAAATGACAAACCATTTGGACCAAATGATGCGATTTCTCGAGCA
* * *
11946844 TGGAATGTTTGGAAAATGGCTTGAAGGAATGGATCGTCATGAATACTTTAAGGAACCAAAGTTAT
452 TGGAATG-TTCGAAAATTGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACCAAAGTTAT
*
11946909 AAAAGAACTCCTAAAAGTTTGACAAGTTCGGAAGTTCATCCAAGAACCAAAAGAGAAACAATTCT
516 AAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCATCCAAGAACCAAAAGAGAAACAATTCT
* *
11946974 GACATAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTTGGACC
581 CACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTA-TTTGGACC
* * * * * * * *
11947039 AAATGATACGATTTCCCAAGCATGGAATGCTCAAAAAATTACTCAAACGAAAGTATCGTTTTGAA
645 AAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTTTTGAA
* * * *
11947104 TACTTTAAGGAATCGAAGTTATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCA
710 TACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGTAAGTTCGTCCA
* * *
11947168 CGAACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAA-CAAAAAGATGTTTA
774 AGAACCAAAAGAGAAACAATTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAA-TTGTTTA
*
11947232 CAAATGACAAACTATTTGGACCG
838 CAAATGACAAACTATTTGGACCA
* * *
11947255 AATGATGCGATTTCCCAAGCATGGAATGTTCGAGAAATTGCTCGAAGGAATAGATCGTCTTGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTC-TGAAT
* * **
11947320 ACTTTAAGGATCCAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCAAAAGTTCGTCCAAG
65 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
* * * * *
11947385 AACCAAGAGAGAAACGATTCTCACTTAAATAAGTTTTAAATTTAAAGACC-AAAGTTGTTTAC-A
130 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACAA
* * * *
11947448 AATGACAAACTATTTGGACCAAATGATGCAATTTCCCAAGCATGGAATGTTCCTAAAATTGCTCG
195 AATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGCTCCGAAAATTGCTCG
* * *
11947513 AAGGAATGGATCGTCTTGAAT-GTT-AGGAACCAAAGTTATAAAAGAACTCGAAAAAGTTTCACA
260 AAGGAATGGATCATCTTGAATATTTAAGGAACCAAAGTTATAAAAGAACTCGAAAAAGTTTGACA
* * *
11947576 AGTTCATAAGTTCGTCCAAGAACCAAAAAAAGAAACAATTCTGACGTAAATAAGTTTTAAATTCA
325 AGTTCATAAGTTCATCCAAGAACC-AAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCA
* *
11947641 AAGACCAAAAGTTTTTTTACAAAATGACAAACCATTTGGACCAAATGATGCGATTTCTCGAGCAT
389 AAAACCAAAAG-TTGTTTACAAAATGACAAACCATTTGGACCAAATGATGCGATTTCTCGAGCAT
*
11947706 GGAATGTTCAGAAAATGGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACCAAAGTTATA
453 GGAATGTTC-GAAAATTGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACCAAAGTTATA
* * *
11947771 AAAGAACTCGTAAAAGTTCGACAAGTTCGGAAGTTCATCCAAGAACCAAAAGAGAAATAATTCTG
517 AAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCATCCAAGAACCAAAAGAGAAACAATTCTC
11947836 ACGTAAATAAG-TTTTAATTCAAAGACCAAAAAGTTGTTTACAAAATGACAAACTATTTTGGACC
582 ACGTAAATAAGTTTTTAATTCAAAGACC-AAAAGTTGTTTACAAAATGACAAACTA-TTTGGACC
* * *
11947900 AAATGATGCGATTT-CCGAGCATGGAATGCTCGAAAAATTGCTCAAAGGAATGGATCGTTTTGAA
645 AAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTTTTGAA
* * * * *
11947964 TACTTTAAAGAATCGAAGTTATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCA
710 TACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGTAAGTTCGTCCA
*
11948028 AGAACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTAC
774 AGAACCAAAAGAGAAACAATTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTAC
11948093 AAATGACAAACTATTTGGACCA
839 AAATGACAAACTATTTGGACCA
* * *
11948115 AATGATGCGATTTCCTAAACATGGAATGTTC-AAAAATTGCTCGATGGAATGGATCGTCTGGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCT-GAAT
* **
11948179 ACTTTAAGGAACCAAAGTTATAAAAGAACTTGTAAAAGTTTCG-CAAGTTCATAAGTTCGTCCAA
65 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTT-GACAAGTTCGGAAGTTCGTCCAA
11948243 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACA
129 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACA
* * * *
11948308 AAATGACAAACCATTTGGATCAAATGATGCGATTTCCCGAGCATGGAATGCTCGGAAAATGGCTC
194 AAATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGCTCCGAAAATTGCTC
* * * * *
11948373 GAAGGAATTGATCATCATGAATGCTTTAAGGAACCAAAGTTATAAAA-AACTCGTAAAATTTTGA
259 GAAGGAATGGATCATCTTGAAT-ATTTAAGGAACCAAAGTTATAAAAGAACTCGAAAAAGTTTGA
* *
11948437 TAAGTTCGA-AAGTTCGTCCAAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATT
323 CAAGTTC-ATAAGTTCATCCAAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATT
* * * * *
11948501 CAAAAACCAAAAAGTTGTTTACAAAAAGGCAAACTATTTTTGACCAAATGATGCGATTTC-CAAG
387 CAAAAACC-AAAAGTTGTTTACAAAATGACAAACCA-TTTGGACCAAATGATGCGATTTCTCGAG
* * * * * ** * * *
11948565 CATGGAAT-CTCGAAAAATTACTCAAATGAATGGATCATTTTAAATACTTTAAGGAATCGAAGTT
450 CATGGAATGTTCG-AAAATTGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACCAAAGTT
* * *
11948629 ATAAAAGAACTCGTAACAA-TTTGACAAGCTCGTAAGTTCATCCAAGAACCAAAAGAGAAACAAG
514 ATAAAAGAACTCGTAA-AAGTTTGACAAGTTCGGAAGTTCATCCAAGAACCAAAAGAGAAACAAT
* * *
11948693 TCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAGTTGTTTAC-AAATGACAAACTATTTGGA
578 TCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGA
* * *
11948757 CCGAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATAGATCGTCTTG
643 CCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTTTTG
* * *
11948822 AATACTTTAAGGAGCCAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCATAAGTTCGTCC
708 AATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTAAGTTCGTCC
* * * * * * *
11948887 AAGAACAAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAATTTGTTTA
773 AAGAACCAAAAGAGAAACAATTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTA
*
11948952 CAAAATGACAAACCATTTGGACCA
838 C-AAATGACAAACTATTTGGACCA
* * * *
11948976 AATGATGCGATTTCTCGAGCGTGGAATGTTCAAAAAATGGCTCGAAGGAATGGATCGTCATGAAT
1 AATGATGCGATTTCCCAAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTC-TGAAT
11949041 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
65 ACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAG
*
11949106 AACC-AAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAAGACCAAAAAGTTGTTTACA
130 AACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACC-AAAAGTTGTTTACA
* * *
11949170 AAATGACAAACTATTTTAGACCAAATGATGCGATTTCCCGAGCATGGAATGGT-CGAAAATTTCT
194 AAATGACAAACTA-TTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGCTCCGAAAATTGCT
* * * * * * * *
11949234 CAAAGGAGTGGATCGTTTTGAATACTTTAAGGAATCGAAGTTATAAAAGAACTTGTAACAA-TTT
258 CGAAGGAATGGATCATCTTGAATA-TTTAAGGAACCAAAGTTATAAAAGAACTCG-AAAAAGTTT
* * * * *
11949298 GACAAGCTCGTAAGTTCATCCAAGAACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTAAT
321 GACAAGTTCATAAGTTCATCCAAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAAT
* * * *
11949363 TTAAAAACCAAAAATTGTTTAC-AAATGACAAACCATTTGGACCAAATGATGCGATTTCCCAAGC
386 TCAAAAACCAAAAGTTGTTTACAAAATGACAAACCATTTGGACCAAATGATGCGATTTCTCGAGC
* * * *
11949427 ATGGAATGTTCAAACAATTGCTCGAAGGAAAGGATCG-CATTTAATACTTTAAGGAA-TAGAAGT
451 ATGGAATGTTCGAA-AATTGCTCGAAGGAATGGATCGTCA-TGAATACTTTAAGGAACCA-AAGT
* * *
11949490 TATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGAACCAAGAGAGAAACGAT
513 TATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCATCCAAGAACCAAAAGAGAAACAAT
* * * * * *
11949555 TCTCACTTTAACAAGTTTTAAATTTAAAGACC-AAAGTTGTTTAC-AAGTGACAAACTATTTGGA
578 TCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGA
*
11949618 CCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTG
643 CCAAATGATGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTTTTG
* * *
11949683 AATACTTTAAGGAACTAAAGTTATAAAAGAACTCGTAAAAGTTTCACAAGTTCATAAGTTCGTCC
708 AATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTAAGTTCGTCC
* * * * * *
11949748 AAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTA
773 AAGAACCAAAAGAGAAACAATTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTA
*
11949813 CAAAATGACAAACCATTTGGACCA
838 C-AAATGACAAACTATTTGGACCA
* * * *
11949837 AATGATGCGATTTTCCGAGCATGGAATGTTCAGAAAAA-GGCTCGAAGGAATGAATCGTCATGAA
1 AATGATGCGATTTCCCAAGCATGGAATGTTCA-AAAAATTGCTCGAAGGAATGGATCGTC-TGAA
* *
11949901 TACTTTAAAGAACCAAAGTTATAAAAGAACTCATAAAAGTTTGACAAGTTCGGAAGTTCGTCCAA
64 TACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAA
*
11949966 GAACCAAAAGAGAAACAATTCTGACGTAAATAAGGTTTT-AATTCAAAGACCAAAAAGTTCTTTA
129 GAACCAAAAGAGAAACAATTCTGACGTAAATAA-GTTTTAAATTCAAAGACC-AAAAGTTGTTTA
**
11950030 CAAAATGACAAACTATATTGCTCCAAATGATGCGATTTCCCGAGCATGGAATGCT-CGAAAATTT
192 CAAAATGACAAACTAT-TTGGACCAAATGATGCGATTTCCCGAGCATGGAATGCTCCGAAAA-TT
* * *
11950094 GCTCAAAGGAATGGATCATTTTGAATACTTTAAGGAATCAAAGTTATAAAAGAACTC------G-
255 GCTCGAAGGAATGGATCATCTTGAATA-TTTAAGGAACCAAAGTTATAAAAGAACTCGAAAAAGT
* * * *
11950152 -TAAC-A----ATAAGTTCATCCAAGAACCAAAAGAGAAACAAGTCTCACTTAAATAAGTTTTTA
319 TTGACAAGTTCATAAGTTCATCCAAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTA
* * *
11950211 ATTTAAAGACCAAAAGTTGTTTAC-AAATGACAAACTATTTGGACCAAATGATGCGATTT-TCGA
384 ATTCAAAAACCAAAAGTTGTTTACAAAATGACAAACCATTTGGACCAAATGATGCGATTTCTCG-
* * **
11950274 AGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTCTTTAATACTTTAAGGAACTGAAG
448 AGCATGGAATGTTCG-AAAATTGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACCAAAG
* * * * * *
11950339 TTATAAAAGAACTCATAAAATTTTGACAAGTTCAGAAGTTCGTCCAGGAACCAACAA-AGAATCA
512 TTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCATCCAAGAACCAA-AAGAGAAACA
* *
11950403 ATTCTAACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGAC--ATTATTTG
576 ATTCTCACGTAAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTG
* * * * * *
11950466 GACCAATTGATGCAATTTCCCGAGCATGGAATGTTCAGGAAATCATT--T-GAAGGAAAGGATTG
641 GACCAAATGATGCGATTTCCCAAGCATGGAATGTTC--GAAA-AATTGCTCGAAGGAATGGATCG
*
11950528 TCTTT-AATACTTTAAGGAACCAAAGTTATAAAA-AAATCGTAAAAGTTTGACAAGTAGGTTTGA
703 T-TTTGAATACTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGAC-A--A-G-TT--
*
11950591 CAAGTTCAGAAGTTCGTCCAAGAACCTAAAGAG--A-AATTCTCACTTAAATAAGTTTTTAATTT
760 C--G-T---AAGTTCGTCCAAGAACCAAAAGAGAAACAATTCTCACTTAAATAAGTTTTTAATTT
* * * *
11950653 AAAAACCAATAGTTGTTTATAAAATGACAAATTATTTGGACCA
819 AAAAACCAAAAATTGTTTA-CAAATGACAAACTATTTGGACCA
*
11950696 AATGATGTGATTTC
1 AATGATGCGATTTC
11950710 TTGAGCATGG
Statistics
Matches: 3110, Mismatches: 277, Indels: 141
0.88 0.08 0.04
Matches are distributed among these distances:
849 17 0.01
850 327 0.11
851 20 0.01
852 11 0.00
853 4 0.00
854 3 0.00
855 3 0.00
856 1 0.00
858 2 0.00
859 279 0.09
860 487 0.16
861 924 0.30
862 521 0.17
863 324 0.10
864 187 0.06
ACGTcount: A:0.41, C:0.15, G:0.17, T:0.27
Consensus pattern (860 bp):
AATGATGCGATTTCCCAAGCATGGAATGTTCAAAAAATTGCTCGAAGGAATGGATCGTCTGAATA
CTTTAAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGGAAGTTCGTCCAAGA
ACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTAAATTCAAAGACCAAAAGTTGTTTACAAA
ATGACAAACTATTTGGACCAAATGATGCGATTTCCCGAGCATGGAATGCTCCGAAAATTGCTCGA
AGGAATGGATCATCTTGAATATTTAAGGAACCAAAGTTATAAAAGAACTCGAAAAAGTTTGACAA
GTTCATAAGTTCATCCAAGAACCAAAAGAGAAACAATTCTGACGTAAATAAGTTTTTAATTCAAA
AACCAAAAGTTGTTTACAAAATGACAAACCATTTGGACCAAATGATGCGATTTCTCGAGCATGGA
ATGTTCGAAAATTGCTCGAAGGAATGGATCGTCATGAATACTTTAAGGAACCAAAGTTATAAAAG
AACTCGTAAAAGTTTGACAAGTTCGGAAGTTCATCCAAGAACCAAAAGAGAAACAATTCTCACGT
AAATAAGTTTTTAATTCAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTTGGACCAAATGA
TGCGATTTCCCAAGCATGGAATGTTCGAAAAATTGCTCGAAGGAATGGATCGTTTTGAATACTTT
AAGGAACCAAAGTTATAAAAGAACTCGTAAAAGTTTGACAAGTTCGTAAGTTCGTCCAAGAACCA
AAAGAGAAACAATTCTCACTTAAATAAGTTTTTAATTTAAAAACCAAAAATTGTTTACAAATGAC
AAACTATTTGGACCA
Found at i:11955295 original size:12 final size:12
Alignment explanation
Indices: 11955278--11955304 Score: 54
Period size: 12 Copynumber: 2.2 Consensus size: 12
11955268 CAAATTAATA
11955278 TTTACTTAATGC
1 TTTACTTAATGC
11955290 TTTACTTAATGC
1 TTTACTTAATGC
11955302 TTT
1 TTT
11955305 TATAATTATT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 15 1.00
ACGTcount: A:0.22, C:0.15, G:0.07, T:0.56
Consensus pattern (12 bp):
TTTACTTAATGC
Found at i:11956509 original size:24 final size:24
Alignment explanation
Indices: 11956477--11956523 Score: 85
Period size: 24 Copynumber: 2.0 Consensus size: 24
11956467 TAATCTTCCA
*
11956477 ATTAAACTCTTTTTATTTGTTTCG
1 ATTAAACTCTATTTATTTGTTTCG
11956501 ATTAAACTCTATTTATTTGTTTC
1 ATTAAACTCTATTTATTTGTTTC
11956524 AGTCAAACTC
Statistics
Matches: 22, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
24 22 1.00
ACGTcount: A:0.23, C:0.13, G:0.06, T:0.57
Consensus pattern (24 bp):
ATTAAACTCTATTTATTTGTTTCG
Found at i:11956531 original size:24 final size:24
Alignment explanation
Indices: 11956480--11956534 Score: 76
Period size: 24 Copynumber: 2.3 Consensus size: 24
11956470 TCTTCCAATT
* *
11956480 AAACTCTTTTTATTTGTTTCGATT
1 AAACTCTATTTATTTGTTTCGATC
11956504 AAACTCTATTTATTTGTTTC-AGTC
1 AAACTCTATTTATTTGTTTCGA-TC
11956528 AAACTCT
1 AAACTCT
11956535 TATTAGTTTA
Statistics
Matches: 28, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
23 1 0.04
24 27 0.96
ACGTcount: A:0.25, C:0.16, G:0.07, T:0.51
Consensus pattern (24 bp):
AAACTCTATTTATTTGTTTCGATC
Found at i:11959552 original size:14 final size:14
Alignment explanation
Indices: 11959533--11959559 Score: 54
Period size: 14 Copynumber: 1.9 Consensus size: 14
11959523 GTAAAATAAT
11959533 AAAAATATTTTACG
1 AAAAATATTTTACG
11959547 AAAAATATTTTAC
1 AAAAATATTTTAC
11959560 ATGTAACCAA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 13 1.00
ACGTcount: A:0.52, C:0.07, G:0.04, T:0.37
Consensus pattern (14 bp):
AAAAATATTTTACG
Found at i:11960362 original size:17 final size:20
Alignment explanation
Indices: 11960342--11960381 Score: 59
Period size: 20 Copynumber: 2.1 Consensus size: 20
11960332 TATTTTATTT
11960342 TTATTTTT-AT-A-ATTTAA
1 TTATTTTTAATAACATTTAA
11960359 TTATTTTTAATAACATTTAA
1 TTATTTTTAATAACATTTAA
11960379 TTA
1 TTA
11960382 ATCAGTCAAT
Statistics
Matches: 20, Mismatches: 0, Indels: 3
0.87 0.00 0.13
Matches are distributed among these distances:
17 8 0.40
18 2 0.10
19 1 0.05
20 9 0.45
ACGTcount: A:0.38, C:0.03, G:0.00, T:0.60
Consensus pattern (20 bp):
TTATTTTTAATAACATTTAA
Found at i:11965008 original size:28 final size:28
Alignment explanation
Indices: 11964969--11965056 Score: 99
Period size: 29 Copynumber: 3.1 Consensus size: 28
11964959 CGTCAAAATA
11964969 ATTTTTTCAGAACACATCACGTCAATTT
1 ATTTTTTCAGAACACATCACGTCAATTT
* * * *
11964997 TTTTTTTCAGAACCCATCTTC-TCAAAATT
1 ATTTTTTCAGAACACATC-ACGTC-AATTT
*
11965026 ATTTTTTCAGAACACATCATGTCAA-TT
1 ATTTTTTCAGAACACATCACGTCAATTT
11965053 ATTT
1 ATTT
11965057 AGATATATTG
Statistics
Matches: 49, Mismatches: 8, Indels: 7
0.77 0.12 0.11
Matches are distributed among these distances:
27 6 0.12
28 20 0.41
29 23 0.47
ACGTcount: A:0.31, C:0.20, G:0.06, T:0.43
Consensus pattern (28 bp):
ATTTTTTCAGAACACATCACGTCAATTT
Found at i:11966950 original size:16 final size:17
Alignment explanation
Indices: 11966917--11966957 Score: 52
Period size: 16 Copynumber: 2.6 Consensus size: 17
11966907 AATTTTACAG
*
11966917 ATATAA-ATTAAATTTA
1 ATATAATATTAAATATA
11966933 ATATAATATTAAA-ATA
1 ATATAATATTAAATATA
11966949 AT-TAATATT
1 ATATAATATT
11966958 TTTAACTCCA
Statistics
Matches: 23, Mismatches: 1, Indels: 3
0.85 0.04 0.11
Matches are distributed among these distances:
15 7 0.30
16 10 0.43
17 6 0.26
ACGTcount: A:0.56, C:0.00, G:0.00, T:0.44
Consensus pattern (17 bp):
ATATAATATTAAATATA
Found at i:11968544 original size:18 final size:18
Alignment explanation
Indices: 11968510--11968544 Score: 52
Period size: 18 Copynumber: 1.9 Consensus size: 18
11968500 GCAAAAGAAT
*
11968510 CAAGAGCAAAGGCAAGGG
1 CAAGAGCAAAGGAAAGGG
*
11968528 CAAGAGCAAGGGAAAGG
1 CAAGAGCAAAGGAAAGG
11968545 ACTCGAGAAA
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
18 15 1.00
ACGTcount: A:0.46, C:0.14, G:0.40, T:0.00
Consensus pattern (18 bp):
CAAGAGCAAAGGAAAGGG
Found at i:11971928 original size:24 final size:23
Alignment explanation
Indices: 11971901--11971988 Score: 88
Period size: 23 Copynumber: 3.8 Consensus size: 23
11971891 TCATTAACAT
11971901 TGTTCGTAAACATGTTCAATTATA
1 TGTTCGTAAACATGTTCAATTA-A
* * *
11971925 TGTTCATAAACATGTTTATTTAA
1 TGTTCGTAAACATGTTCAATTAA
* *
11971948 TGTTCGTGAACATGTTCGATTAA
1 TGTTCGTAAACATGTTCAATTAA
**
11971971 -GTTAAATAAACATGTTCA
1 TGTT-CGTAAACATGTTCA
11971989 TGAACATTAA
Statistics
Matches: 51, Mismatches: 12, Indels: 3
0.77 0.18 0.05
Matches are distributed among these distances:
22 3 0.06
23 29 0.57
24 19 0.37
ACGTcount: A:0.34, C:0.11, G:0.14, T:0.41
Consensus pattern (23 bp):
TGTTCGTAAACATGTTCAATTAA
Found at i:11974201 original size:13 final size:14
Alignment explanation
Indices: 11974183--11974211 Score: 51
Period size: 13 Copynumber: 2.1 Consensus size: 14
11974173 TAAAATTAAT
11974183 ATAAATATT-TATA
1 ATAAATATTATATA
11974196 ATAAATATTATATA
1 ATAAATATTATATA
11974210 AT
1 AT
11974212 CAAGTTAAAA
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
13 9 0.60
14 6 0.40
ACGTcount: A:0.55, C:0.00, G:0.00, T:0.45
Consensus pattern (14 bp):
ATAAATATTATATA
Found at i:11974208 original size:24 final size:23
Alignment explanation
Indices: 11974165--11974210 Score: 58
Period size: 24 Copynumber: 2.0 Consensus size: 23
11974155 AATATCATGT
*
11974165 TATTTAATTAAAATTAATATAAA
1 TATTTAAATAAAATTAATATAAA
11974188 TATTTATAATAAATATT-ATATAA
1 TATTTA-AATAAA-ATTAATATAA
11974211 TCAAGTTAAA
Statistics
Matches: 20, Mismatches: 1, Indels: 3
0.83 0.04 0.12
Matches are distributed among these distances:
23 6 0.30
24 11 0.55
25 3 0.15
ACGTcount: A:0.54, C:0.00, G:0.00, T:0.46
Consensus pattern (23 bp):
TATTTAAATAAAATTAATATAAA
Found at i:11974220 original size:44 final size:45
Alignment explanation
Indices: 11974137--11974257 Score: 138
Period size: 44 Copynumber: 2.7 Consensus size: 45
11974127 ATTGGCCAAG
* * * * *
11974137 TATAAATAATTGATAATAAATATCATGTTATTTAATTAAAATT-AA
1 TATAAATAATTTATAATAAATATTAT-ATAATCAATTAAAATTAAA
11974182 TATAAAT-ATTTATAATAAATATTATATAATCAAGTTAAAATTAAA
1 TATAAATAATTTATAATAAATATTATATAATCAA-TTAAAATTAAA
* * *
11974227 TATAAATAATTTATTATAAATACTATGTAAT
1 TATAAATAATTTATAATAAATATTATATAAT
11974258 TTAGTATATA
Statistics
Matches: 65, Mismatches: 8, Indels: 5
0.83 0.10 0.06
Matches are distributed among these distances:
43 5 0.08
44 24 0.37
45 16 0.25
46 20 0.31
ACGTcount: A:0.52, C:0.02, G:0.03, T:0.42
Consensus pattern (45 bp):
TATAAATAATTTATAATAAATATTATATAATCAATTAAAATTAAA
Found at i:11982391 original size:31 final size:31
Alignment explanation
Indices: 11982353--11982429 Score: 136
Period size: 31 Copynumber: 2.5 Consensus size: 31
11982343 TTAATACTTG
*
11982353 AACTTGACACTTTTTCCTAATTTGATACCTA
1 AACTTGACACTTTTTCATAATTTGATACCTA
*
11982384 AACTTGACACTTTTTCATAATTTGATACTTA
1 AACTTGACACTTTTTCATAATTTGATACCTA
11982415 AACTTGACACTTTTT
1 AACTTGACACTTTTT
11982430 TAAAGTTGGT
Statistics
Matches: 44, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
31 44 1.00
ACGTcount: A:0.30, C:0.19, G:0.06, T:0.44
Consensus pattern (31 bp):
AACTTGACACTTTTTCATAATTTGATACCTA
Found at i:11982445 original size:30 final size:30
Alignment explanation
Indices: 11982341--11982449 Score: 130
Period size: 31 Copynumber: 3.6 Consensus size: 30
11982331 TTAATATAAC
* *
11982341 ATTTAATACTTGAACTTGACACTTTTTCCT-A
1 ATTTGATACTTAAACTTGACACTTTTT--TAA
* *
11982372 ATTTGATACCTAAACTTGACACTTTTTCATA
1 ATTTGATACTTAAACTTGACACTTTTTTA-A
11982403 ATTTGATACTTAAACTTGACACTTTTTTAA
1 ATTTGATACTTAAACTTGACACTTTTTTAA
* *
11982433 AGTTGGTACTTAAACTT
1 ATTTGATACTTAAACTT
11982450 TTTGAGATCC
Statistics
Matches: 68, Mismatches: 8, Indels: 5
0.84 0.10 0.06
Matches are distributed among these distances:
30 16 0.24
31 52 0.76
ACGTcount: A:0.31, C:0.17, G:0.08, T:0.44
Consensus pattern (30 bp):
ATTTGATACTTAAACTTGACACTTTTTTAA
Found at i:11984889 original size:39 final size:39
Alignment explanation
Indices: 11984807--11984896 Score: 110
Period size: 39 Copynumber: 2.3 Consensus size: 39
11984797 TTTTGTCAAA
* * * *
11984807 TATGTAAT-TGATACGAGTCGCAAGGCCCATATTCAAGCT
1 TATG-AATGTGATACGAGTCGCAAAGCCCAAAATCAAGCG
*
11984846 TATGAATGTGATACGAGTCGCAAAGCCCAAAATCCAGCG
1 TATGAATGTGATACGAGTCGCAAAGCCCAAAATCAAGCG
*
11984885 TATGAACGTGAT
1 TATGAATGTGAT
11984897 GGGCTCAATC
Statistics
Matches: 44, Mismatches: 6, Indels: 2
0.85 0.12 0.04
Matches are distributed among these distances:
38 3 0.07
39 41 0.93
ACGTcount: A:0.33, C:0.20, G:0.22, T:0.24
Consensus pattern (39 bp):
TATGAATGTGATACGAGTCGCAAAGCCCAAAATCAAGCG
Found at i:12006341 original size:21 final size:21
Alignment explanation
Indices: 12006298--12006341 Score: 61
Period size: 21 Copynumber: 2.1 Consensus size: 21
12006288 TAGATGCATG
*
12006298 ACTTGTATCGGTAGAAATTGC
1 ACTTGTATCGGTAGAAATAGC
* *
12006319 ACTTGTATTGGTAGAACTAGC
1 ACTTGTATCGGTAGAAATAGC
12006340 AC
1 AC
12006342 AAGTATATGT
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.30, C:0.16, G:0.23, T:0.32
Consensus pattern (21 bp):
ACTTGTATCGGTAGAAATAGC
Found at i:12007231 original size:23 final size:22
Alignment explanation
Indices: 12007205--12007248 Score: 61
Period size: 23 Copynumber: 2.0 Consensus size: 22
12007195 AAAATATTTC
*
12007205 ATTAAATAATTTGGGTTGAATTA
1 ATTAAATAAATTGGGTT-AATTA
*
12007228 ATTAATTAAATTGGGTTAATT
1 ATTAAATAAATTGGGTTAATT
12007249 TTATTTCTTT
Statistics
Matches: 19, Mismatches: 2, Indels: 1
0.86 0.09 0.05
Matches are distributed among these distances:
22 4 0.21
23 15 0.79
ACGTcount: A:0.39, C:0.00, G:0.16, T:0.45
Consensus pattern (22 bp):
ATTAAATAAATTGGGTTAATTA
Found at i:12009341 original size:23 final size:23
Alignment explanation
Indices: 12009311--12009357 Score: 76
Period size: 23 Copynumber: 2.0 Consensus size: 23
12009301 CCTAGCAAGA
*
12009311 ATGCTAAGTTGAGGAATGAGATC
1 ATGCTAAGTTGAGGAACGAGATC
*
12009334 ATGCTAAGTTGATGAACGAGATC
1 ATGCTAAGTTGAGGAACGAGATC
12009357 A
1 A
12009358 CAACTTTCCA
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
23 22 1.00
ACGTcount: A:0.36, C:0.11, G:0.28, T:0.26
Consensus pattern (23 bp):
ATGCTAAGTTGAGGAACGAGATC
Found at i:12014823 original size:22 final size:22
Alignment explanation
Indices: 12014798--12014841 Score: 61
Period size: 22 Copynumber: 2.0 Consensus size: 22
12014788 AAGCACCAAC
*
12014798 GTTGCTACCGCACATCACCGTT
1 GTTGCCACCGCACATCACCGTT
* *
12014820 GTTGCCACCGTACATCATCGTT
1 GTTGCCACCGCACATCACCGTT
12014842 ACTATCGTAT
Statistics
Matches: 19, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
22 19 1.00
ACGTcount: A:0.18, C:0.34, G:0.18, T:0.30
Consensus pattern (22 bp):
GTTGCCACCGCACATCACCGTT
Found at i:12030942 original size:21 final size:21
Alignment explanation
Indices: 12030896--12030945 Score: 66
Period size: 21 Copynumber: 2.4 Consensus size: 21
12030886 TCAAACATAT
12030896 TTAATTAAAATATTTAAACTC
1 TTAATTAAAATATTTAAACTC
* *
12030917 ATAATTAAAATTTTTAAGAC-C
1 TTAATTAAAATATTTAA-ACTC
12030938 TTAATTAA
1 TTAATTAA
12030946 TCATTTTTCG
Statistics
Matches: 25, Mismatches: 3, Indels: 2
0.83 0.10 0.07
Matches are distributed among these distances:
21 23 0.92
22 2 0.08
ACGTcount: A:0.48, C:0.08, G:0.02, T:0.42
Consensus pattern (21 bp):
TTAATTAAAATATTTAAACTC
Found at i:12032746 original size:29 final size:29
Alignment explanation
Indices: 12032700--12032874 Score: 190
Period size: 30 Copynumber: 5.9 Consensus size: 29
12032690 TGAAAATTTG
*
12032700 GAAAGTTTGAGGGATAAAATGCAATTTTTA
1 GAAAGTTT-AGGGCTAAAATGCAATTTTTA
* *
12032730 GAAATTTTAAGGCTAAAATGCAATTTTTA
1 GAAAGTTTAGGGCTAAAATGCAATTTTTA
* * *
12032759 AAAAGTTTAGGGCCAAAATACAATTTTTA
1 GAAAGTTTAGGGCTAAAATGCAATTTTTA
* *
12032788 GAAAGTTTAAGGGTTAAAATGAAATTTTTA
1 GAAAGTTT-AGGGCTAAAATGCAATTTTTA
* **
12032818 GAAAGTTTAGGGACGAAAATATAATTTTTA
1 GAAAGTTTAGGG-CTAAAATGCAATTTTTA
*
12032848 GAAATTTTAGGGGAC-AAAATGCAATTT
1 GAAAGTTTA-GGG-CTAAAATGCAATTT
12032875 GTAAAGTAAA
Statistics
Matches: 122, Mismatches: 20, Indels: 6
0.82 0.14 0.04
Matches are distributed among these distances:
29 54 0.44
30 63 0.52
31 5 0.04
ACGTcount: A:0.42, C:0.05, G:0.19, T:0.34
Consensus pattern (29 bp):
GAAAGTTTAGGGCTAAAATGCAATTTTTA
Found at i:12032764 original size:59 final size:58
Alignment explanation
Indices: 12032701--12032879 Score: 216
Period size: 60 Copynumber: 3.0 Consensus size: 58
12032691 GAAAATTTGG
* *
12032701 AAAGTTTGAGGGATAAAATGCAATTTTTAGAAATTTTAAGGCTAAAATGCAATTTTTAA
1 AAAGTTT-AGGGACAAAATACAATTTTTAGAAATTTTAAGGCTAAAATGCAATTTTTAA
* * * * *
12032760 AAAGTTTAGGGCCAAAATACAATTTTTAGAAAGTTTAAGGGTTAAAATGAAATTTTTAG
1 AAAGTTTAGGGACAAAATACAATTTTTAGAAATTTTAA-GGCTAAAATGCAATTTTTAA
* * *
12032819 AAAGTTTAGGGACGAAAATATAATTTTTAGAAATTTTAGGGGAC-AAAATGCAATTTGTAA
1 AAAGTTTAGGGAC-AAAATACAATTTTTAGAAATTTTA-AGG-CTAAAATGCAATTTTTAA
12032879 A
1 A
12032880 GTAAAATAAG
Statistics
Matches: 101, Mismatches: 15, Indels: 7
0.82 0.12 0.06
Matches are distributed among these distances:
58 27 0.27
59 36 0.36
60 38 0.38
ACGTcount: A:0.43, C:0.05, G:0.18, T:0.34
Consensus pattern (58 bp):
AAAGTTTAGGGACAAAATACAATTTTTAGAAATTTTAAGGCTAAAATGCAATTTTTAA
Found at i:12034782 original size:78 final size:78
Alignment explanation
Indices: 12034491--12035134 Score: 835
Period size: 78 Copynumber: 8.3 Consensus size: 78
12034481 CCACGGTCAG
* * * * * *** *
12034491 GGTAAGAGATTAGG-TGTTTCAATTTGCCCCATGATTAGGGTAAGAAATT-ACATGTCTTCGATC
1 GGTAAAAGATT-GGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGTGTGTCTTCAATC
* * *
12034554 TGCCCTCTGATTAG
65 TACCTTCTGATTAA
* *
12034568 GGTAAAAGATT-GAGTGCTTCAATCTACCCCATGATCAGGGT----GCTTGGTGTGTCTTCAATC
1 GGTAAAAGATTGGA-TGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGTGTGTCTTCAATC
* *
12034628 TGCCTTTTGATTAA
65 TACCTTCTGATTAA
* *
12034642 GGTAAAAGATTGGATGCTTCAAT-TTCCTCATGATCAGGGTAAGAGATTGGAT-TGTCTTCAATC
1 GGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGG-TGTGTCTTCAATC
12034705 TACCTTCTGATTAA
65 TACCTTCTGATTAA
* * *
12034719 GGTAAAAGATTGAATGCTTCAATTTGCCCCATGATCGGGGTAAGAGATTGGTGTGTCTTCAATCT
1 GGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGTGTGTCTTCAATCT
12034784 ACCTTCTGATTAA
66 ACCTTCTGATTAA
* * * * *
12034797 GGTAAAAGATTGGATGCTTCAATCTGCCCTATGATCGGGGTAAGAGATTAGCGTGTCTTCTATCT
1 GGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGTGTGTCTTCAATCT
12034862 ACCTTCTGA-TACA
66 ACCTTCTGATTA-A
12034875 GGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGAT-TGTCTTCAATC
1 GGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGG-TGTGTCTTCAATC
*
12034939 TGCCTTCTGATTAA
65 TACCTTCTGATTAA
* * **
12034953 GGTAAAAGGTTGGATGCTTTAATCTGCCCCATGATTGGGGTAAGAGATTGG-GTTGTCTTCAATC
1 GGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGTG-TGTCTTCAATC
*
12035017 TACCTTCTAATTAA
65 TACCTTCTGATTAA
* *
12035031 GGTAAAAGATTGGATGCTTCAATCTGCCCTATGATCGGGGTAAGAGATTGGTGTGTCTTCAATCT
1 GGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGTGTGTCTTCAATCT
*
12035096 GCCTTCTGATTAA
66 ACCTTCTGATTAA
12035109 GGTAAAAGATTGGATGCTTCAATCTG
1 GGTAAAAGATTGGATGCTTCAATCTG
12035135 AGGGTGAGAC
Statistics
Matches: 503, Mismatches: 47, Indels: 33
0.86 0.08 0.06
Matches are distributed among these distances:
73 17 0.03
74 41 0.08
75 3 0.01
77 86 0.17
78 353 0.70
79 3 0.01
ACGTcount: A:0.26, C:0.17, G:0.23, T:0.34
Consensus pattern (78 bp):
GGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGTGTGTCTTCAATCT
ACCTTCTGATTAA
Found at i:12034947 original size:234 final size:233
Alignment explanation
Indices: 12034508--12035134 Score: 926
Period size: 234 Copynumber: 2.7 Consensus size: 233
12034498 GATTAGGTGT
* * *** * * * *
12034508 TTCAATTTGCCCCATGATTAGGGTAAGAAATTACATGTCTTCGATCTGCCCTCTGATTAGGGTAA
1 TTCAATTTGCCCCATGATTGGGGTAAGAGATTGGGTGTCTTCAATCTACCTTCTGATTAAGGTAA
* * * *
12034573 AAGATT-GAGTGCTTCAATCTACCCCATGATCAGGGT----GCTTGGTGTGTCTTCAATCTGCCT
66 AAGATTGGA-TGCTTCAATCTGCCCTATGATCGGGGTAAGAGATTGGTGTGTCTTCAATCTGCCT
* * *
12034633 TTTGATTAAGGTAAAAGATTGGATGCTTCAAT-TTCCTCATGATCAGGGTAAGAGATTGGATTGT
130 TCTGATTAAGGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGATTGT
12034697 CTTCAATCTACCTTCTGATTAAGGTAAAAGATTGAATGC
195 CTTCAATCTACCTTCTGATTAAGGTAAAAGATTGAATGC
*
12034736 TTCAATTTGCCCCATGATCGGGGTAAGAGATTGGTGTGTCTTCAATCTACCTTCTGATTAAGGTA
1 TTCAATTTGCCCCATGATTGGGGTAAGAGATTGG-GTGTCTTCAATCTACCTTCTGATTAAGGTA
* * * *
12034801 AAAGATTGGATGCTTCAATCTGCCCTATGATCGGGGTAAGAGATTAGCGTGTCTTCTATCTACCT
65 AAAGATTGGATGCTTCAATCTGCCCTATGATCGGGGTAAGAGATTGGTGTGTCTTCAATCTGCCT
12034866 TCTGA-TACAGGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGATTG
130 TCTGATTA-AGGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGATTG
* * *
12034930 TCTTCAATCTGCCTTCTGATTAAGGTAAAAGGTTGGATGC
194 TCTTCAATCTACCTTCTGATTAAGGTAAAAGATTGAATGC
* * *
12034970 TTTAATCTGCCCCATGATTGGGGTAAGAGATTGGGTTGTCTTCAATCTACCTTCTAATTAAGGTA
1 TTCAATTTGCCCCATGATTGGGGTAAGAGATTGGG-TGTCTTCAATCTACCTTCTGATTAAGGTA
12035035 AAAGATTGGATGCTTCAATCTGCCCTATGATCGGGGTAAGAGATTGGTGTGTCTTCAATCTGCCT
65 AAAGATTGGATGCTTCAATCTGCCCTATGATCGGGGTAAGAGATTGGTGTGTCTTCAATCTGCCT
12035100 TCTGATTAAGGTAAAAGATTGGATGCTTCAATCTG
130 TCTGATTAAGGTAAAAGATTGGATGCTTCAATCTG
12035135 AGGGTGAGAC
Statistics
Matches: 357, Mismatches: 32, Indels: 14
0.89 0.08 0.03
Matches are distributed among these distances:
228 29 0.08
229 56 0.16
230 2 0.01
232 2 0.01
233 48 0.13
234 218 0.61
235 2 0.01
ACGTcount: A:0.26, C:0.17, G:0.23, T:0.34
Consensus pattern (233 bp):
TTCAATTTGCCCCATGATTGGGGTAAGAGATTGGGTGTCTTCAATCTACCTTCTGATTAAGGTAA
AAGATTGGATGCTTCAATCTGCCCTATGATCGGGGTAAGAGATTGGTGTGTCTTCAATCTGCCTT
CTGATTAAGGTAAAAGATTGGATGCTTCAATCTGCCCCATGATCAGGGTAAGAGATTGGATTGTC
TTCAATCTACCTTCTGATTAAGGTAAAAGATTGAATGC
Found at i:12047577 original size:59 final size:57
Alignment explanation
Indices: 12047514--12047719 Score: 207
Period size: 59 Copynumber: 3.5 Consensus size: 57
12047504 GAAAAAAACG
* * * *
12047514 GGGTCAAAATTGAAAATTTAGAAAGCTT-GGGGTTAAAATGCAACTTTTAGAAAGTTTAA
1 GGGTCAAAA-TGAAATTTTAGAAAGTTTAGGGGCTAAAATGCAA-TTTTAGAAAATTT-A
* * * **
12047573 GGGTCTAAATTTAATTTTTAGAAAGTTTAATGGCTAAAATGCAATTTTTAGAAAATTTA
1 GGGTC-AAAATGAAATTTTAGAAAGTTTAGGGGCTAAAATGCAA-TTTTAGAAAATTTA
* * *
12047632 GGGCCAAAATGTAATTTTTAGAAAGTTTAGGGGCTAAAATGTAATGTTTAGAAAATTTA
1 GGGTCAAAATG-AAATTTTAGAAAGTTTAGGGGCTAAAATGCAAT-TTTAGAAAATTTA
*
12047691 GAGGTTAAAATGAAATTTTTAGAAAGTTT
1 G-GGTCAAAATGAAA-TTTTAGAAAGTTT
12047720 GAGGACCAAA
Statistics
Matches: 122, Mismatches: 19, Indels: 11
0.80 0.12 0.07
Matches are distributed among these distances:
58 5 0.04
59 69 0.57
60 48 0.39
ACGTcount: A:0.40, C:0.05, G:0.20, T:0.35
Consensus pattern (57 bp):
GGGTCAAAATGAAATTTTAGAAAGTTTAGGGGCTAAAATGCAATTTTAGAAAATTTA
Found at i:12047594 original size:30 final size:30
Alignment explanation
Indices: 12047530--12047745 Score: 201
Period size: 30 Copynumber: 7.3 Consensus size: 30
12047520 AAATTGAAAA
* * * *
12047530 TTTAGAAAGCTTGGGGT-TAAAATGCAACT
1 TTTAGAAAGTTTAGGGTCTAAAATGTAATT
*
12047559 TTTAGAAAGTTTAAGGGTCT-AAATTTAATT
1 TTTAGAAAGTTT-AGGGTCTAAAATGTAATT
* *
12047589 TTTAGAAAGTTTAATGG-CTAAAATGCAATT
1 TTTAGAAAGTTT-AGGGTCTAAAATGTAATT
* *
12047619 TTTAGAAAATTTAGGG-CCAAAATGTAATT
1 TTTAGAAAGTTTAGGGTCTAAAATGTAATT
* *
12047648 TTTAGAAAGTTTAGGGGCTAAAATGTAATG
1 TTTAGAAAGTTTAGGGTCTAAAATGTAATT
* *
12047678 TTTAGAAAATTTAGAGGT-TAAAATGAAATT
1 TTTAGAAAGTTTAG-GGTCTAAAATGTAATT
* * **
12047708 TTTAGAAAGTTT-GAGGACCAAAACATAATT
1 TTTAGAAAGTTTAG-GGTCTAAAATGTAATT
12047738 TTTAGAAA
1 TTTAGAAA
12047746 ATTCGAGTAT
Statistics
Matches: 156, Mismatches: 25, Indels: 11
0.81 0.13 0.06
Matches are distributed among these distances:
29 46 0.29
30 107 0.69
31 3 0.02
ACGTcount: A:0.40, C:0.06, G:0.19, T:0.35
Consensus pattern (30 bp):
TTTAGAAAGTTTAGGGTCTAAAATGTAATT
Found at i:12047625 original size:89 final size:89
Alignment explanation
Indices: 12047530--12047730 Score: 226
Period size: 89 Copynumber: 2.2 Consensus size: 89
12047520 AAATTGAAAA
* ** * * *
12047530 TTTAGAAAGCTTGGGGTTAAAATGCAACTTTTAGAAAGTTTAAGGGTCT-AAATTTAATTTTTAG
1 TTTAGAAAGCTTAGGGCCAAAATGCAACTTTTAGAAAGTTT-AGGGGCTAAAATGTAATGTTTAG
* *
12047594 AAAGTTTA-ATGGCTAAAATGCAATT
65 AAAATTTAGA-GGCTAAAATGAAATT
** * *
12047619 TTTAGAAAATTTAGGGCCAAAATGTAATTTTTAGAAAGTTTAGGGGCTAAAATGTAATGTTTAGA
1 TTTAGAAAGCTTAGGGCCAAAATGCAACTTTTAGAAAGTTTAGGGGCTAAAATGTAATGTTTAGA
*
12047684 AAATTTAGAGGTTAAAATGAAATT
66 AAATTTAGAGGCTAAAATGAAATT
* *
12047708 TTTAGAAAGTTTGAGGACCAAAA
1 TTTAGAAAGCTT-AGGGCCAAAA
12047731 CATAATTTTT
Statistics
Matches: 94, Mismatches: 15, Indels: 5
0.82 0.13 0.04
Matches are distributed among these distances:
88 6 0.06
89 78 0.83
90 10 0.11
ACGTcount: A:0.40, C:0.05, G:0.20, T:0.35
Consensus pattern (89 bp):
TTTAGAAAGCTTAGGGCCAAAATGCAACTTTTAGAAAGTTTAGGGGCTAAAATGTAATGTTTAGA
AAATTTAGAGGCTAAAATGAAATT
Found at i:12047760 original size:30 final size:30
Alignment explanation
Indices: 12047704--12047774 Score: 88
Period size: 30 Copynumber: 2.4 Consensus size: 30
12047694 GTTAAAATGA
* * *
12047704 AATTTTTAGAAAGTTTGAGGACCAAAACAT
1 AATTTTTAGAAAATTCGAGGACCAAAACAC
* * *
12047734 AATTTTTAGAAAATTCGAGTATCAAAATAC
1 AATTTTTAGAAAATTCGAGGACCAAAACAC
12047764 AATTTTTAGAA
1 AATTTTTAGAA
12047775 TAAAACAAAG
Statistics
Matches: 35, Mismatches: 6, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
30 35 1.00
ACGTcount: A:0.45, C:0.08, G:0.13, T:0.34
Consensus pattern (30 bp):
AATTTTTAGAAAATTCGAGGACCAAAACAC
Found at i:12047761 original size:60 final size:61
Alignment explanation
Indices: 12047619--12047774 Score: 164
Period size: 60 Copynumber: 2.6 Consensus size: 61
12047609 AAATGCAATT
* * * * **
12047619 TTTAGAAAATTTAG-GG-CCAAAATGTAATTTTTAGAAAGTTTAGGGGCTAAAATGTAATG
1 TTTAGAAAATTTAGAGGTTCAAAATGAAATTTTTAGAAAGTTTAGGGACCAAAACATAATG
*
12047678 TTTAGAAAATTTAGAGGTT-AAAATGAAATTTTTAGAAAGTTT-GAGGACCAAAACATAATT
1 TTTAGAAAATTTAGAGGTTCAAAATGAAATTTTTAGAAAGTTTAG-GGACCAAAACATAATG
*
12047738 TTTAGAAAA-TTCGA-GTATCAAAAT-ACAATTTTTAGAA
1 TTTAGAAAATTTAGAGGT-TCAAAATGA-AATTTTTAGAA
12047775 TAAAACAAAG
Statistics
Matches: 83, Mismatches: 8, Indels: 11
0.81 0.08 0.11
Matches are distributed among these distances:
58 2 0.02
59 21 0.25
60 60 0.72
ACGTcount: A:0.43, C:0.06, G:0.17, T:0.34
Consensus pattern (61 bp):
TTTAGAAAATTTAGAGGTTCAAAATGAAATTTTTAGAAAGTTTAGGGACCAAAACATAATG
Found at i:12053311 original size:21 final size:21
Alignment explanation
Indices: 12053286--12053337 Score: 61
Period size: 21 Copynumber: 2.5 Consensus size: 21
12053276 TGAGACAATA
12053286 CTACCGATACAAGT-ATGACTT
1 CTACCGATACAAGTCATG-CTT
* * *
12053307 GTACCGAAACATGTCATGCTT
1 CTACCGATACAAGTCATGCTT
12053328 CTACCGATAC
1 CTACCGATAC
12053338 TAAAAACTCC
Statistics
Matches: 25, Mismatches: 5, Indels: 2
0.78 0.16 0.06
Matches are distributed among these distances:
21 22 0.88
22 3 0.12
ACGTcount: A:0.31, C:0.27, G:0.15, T:0.27
Consensus pattern (21 bp):
CTACCGATACAAGTCATGCTT
Found at i:12054118 original size:28 final size:27
Alignment explanation
Indices: 12054058--12054139 Score: 110
Period size: 28 Copynumber: 3.0 Consensus size: 27
12054048 GATATTCGAT
*
12054058 TTACTCCTTATTGACCAAAAGTCATGC
1 TTACTCCTTATTGACCAAAGGTCATGC
*
12054085 TTACTCCCTATTGACCTAAAGGTCATGC
1 TTACTCCTTATTGACC-AAAGGTCATGC
* *
12054113 TTACTCCTTGTTAACCCAAAGGTCATG
1 TTACTCCTTATTGA-CCAAAGGTCATG
12054140 ATGCTTATTT
Statistics
Matches: 48, Mismatches: 5, Indels: 3
0.86 0.09 0.05
Matches are distributed among these distances:
27 15 0.31
28 31 0.65
29 2 0.04
ACGTcount: A:0.27, C:0.27, G:0.13, T:0.33
Consensus pattern (27 bp):
TTACTCCTTATTGACCAAAGGTCATGC
Found at i:12054372 original size:60 final size:60
Alignment explanation
Indices: 12054279--12054399 Score: 242
Period size: 60 Copynumber: 2.0 Consensus size: 60
12054269 ACAAGCATAA
12054279 ATCTCAGCCATCGTAGGGCCTGTAATCCTTTCTTGGATTCTATTCACCTTATGGTGACTC
1 ATCTCAGCCATCGTAGGGCCTGTAATCCTTTCTTGGATTCTATTCACCTTATGGTGACTC
12054339 ATCTCAGCCATCGTAGGGCCTGTAATCCTTTCTTGGATTCTATTCACCTTATGGTGACTC
1 ATCTCAGCCATCGTAGGGCCTGTAATCCTTTCTTGGATTCTATTCACCTTATGGTGACTC
12054399 A
1 A
12054400 CAATGCTATA
Statistics
Matches: 61, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
60 61 1.00
ACGTcount: A:0.19, C:0.26, G:0.18, T:0.36
Consensus pattern (60 bp):
ATCTCAGCCATCGTAGGGCCTGTAATCCTTTCTTGGATTCTATTCACCTTATGGTGACTC
Found at i:12058850 original size:2 final size:2
Alignment explanation
Indices: 12058845--12058872 Score: 56
Period size: 2 Copynumber: 14.0 Consensus size: 2
12058835 TTTTTTTAAA
12058845 AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT
12058873 TTCAGGAGTT
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 26 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:12059418 original size:23 final size:23
Alignment explanation
Indices: 12059368--12059447 Score: 81
Period size: 23 Copynumber: 3.4 Consensus size: 23
12059358 ATTATTTGTG
* *
12059368 AACATGTTCAATTATATGTTCATG
1 AACATGTTCGATTA-ATGTTCATC
* *
12059392 AACATGTTCGTTTAATGTTCGTC
1 AACATGTTCGATTAATGTTCATC
* *
12059415 AACATGTTCGATTAA-GTTAAATG
1 AACATGTTCGATTAATGTT-CATC
12059438 AACATGTTCG
1 AACATGTTCG
12059448 TGAACATTAA
Statistics
Matches: 47, Mismatches: 8, Indels: 3
0.81 0.14 0.05
Matches are distributed among these distances:
22 3 0.06
23 32 0.68
24 12 0.26
ACGTcount: A:0.31, C:0.14, G:0.16, T:0.39
Consensus pattern (23 bp):
AACATGTTCGATTAATGTTCATC
Found at i:12059469 original size:15 final size:15
Alignment explanation
Indices: 12059449--12059499 Score: 50
Period size: 15 Copynumber: 3.4 Consensus size: 15
12059439 ACATGTTCGT
12059449 GAACATTAAACAAAC
1 GAACATTAAACAAAC
*
12059464 GAACATT-AACACAC
1 GAACATTAAACAAAC
** *
12059478 AGAATTTTAAATAAAC
1 -GAACATTAAACAAAC
12059494 GAACAT
1 GAACAT
12059500 GAACAAAAAT
Statistics
Matches: 27, Mismatches: 7, Indels: 4
0.71 0.18 0.11
Matches are distributed among these distances:
14 6 0.22
15 16 0.59
16 5 0.19
ACGTcount: A:0.55, C:0.18, G:0.08, T:0.20
Consensus pattern (15 bp):
GAACATTAAACAAAC
Found at i:12059554 original size:20 final size:20
Alignment explanation
Indices: 12059529--12059569 Score: 55
Period size: 20 Copynumber: 2.0 Consensus size: 20
12059519 CTTAACGAAC
*
12059529 ACAAACAAACTTAAAAATAA
1 ACAAACAAACATAAAAATAA
* *
12059549 ACAAACGAACATGAAAATAA
1 ACAAACAAACATAAAAATAA
12059569 A
1 A
12059570 TTTGTTCGTG
Statistics
Matches: 18, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
20 18 1.00
ACGTcount: A:0.68, C:0.15, G:0.05, T:0.12
Consensus pattern (20 bp):
ACAAACAAACATAAAAATAA
Found at i:12060809 original size:15 final size:16
Alignment explanation
Indices: 12060761--12060815 Score: 58
Period size: 16 Copynumber: 3.4 Consensus size: 16
12060751 ATTTTTTTGA
* *
12060761 AAAAAATAAAAAATTCT
1 AAAAAAT-AAATATTTT
*
12060778 AGAAAATAAATATTTT
1 AAAAAATAAATATTTT
*
12060794 AAAAAATAATTA-TTT
1 AAAAAATAAATATTTT
12060809 AAAAAAT
1 AAAAAAT
12060816 CACATATAAG
Statistics
Matches: 33, Mismatches: 5, Indels: 2
0.82 0.12 0.05
Matches are distributed among these distances:
15 10 0.30
16 17 0.52
17 6 0.18
ACGTcount: A:0.65, C:0.02, G:0.02, T:0.31
Consensus pattern (16 bp):
AAAAAATAAATATTTT
Found at i:12068840 original size:42 final size:42
Alignment explanation
Indices: 12068778--12068862 Score: 134
Period size: 42 Copynumber: 2.0 Consensus size: 42
12068768 TTATATATAT
* *
12068778 TAAGAATATACAAGGTATTTCAACTAGAAAGAAAATAGAAAA
1 TAAGAATATACAAGGAATTTCAACTAAAAAGAAAATAGAAAA
* *
12068820 TAAGAATATACGAGGAATTTCAGCTAAAAAGAAAATAGAAAA
1 TAAGAATATACAAGGAATTTCAACTAAAAAGAAAATAGAAAA
12068862 T
1 T
12068863 TTTATTAATT
Statistics
Matches: 39, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
42 39 1.00
ACGTcount: A:0.56, C:0.07, G:0.15, T:0.21
Consensus pattern (42 bp):
TAAGAATATACAAGGAATTTCAACTAAAAAGAAAATAGAAAA
Found at i:12069477 original size:132 final size:131
Alignment explanation
Indices: 12069215--12069479 Score: 451
Period size: 132 Copynumber: 2.0 Consensus size: 131
12069205 AAGGTTAAAA
* * *
12069215 ATAATAATTTTGTTGCACTAGATAGGTTTTATTAAAGCATTTTATACATTTTCACTTGCAACAAA
1 ATAATAATTTTGTTGCACTAGATAGGATTTATTAAAGCATTTTATACATTTGCACTTACAACAAA
* *
12069280 TTTTCTATATTGACCTTAACAATGAATTTTTTCATAATAATTTTAACCTACTTGATTTTTATTGT
66 TTTTCTATATTAACCTTAACAATGAATTTTTTCATAATAATCTTAACCTACTTGATTTTTATTGT
12069345 T
131 T
12069346 ATAATAATTTTGTTGCACTAGATA-GATTTATTAAAGCATTTTATACATTTGCACTTACAACAAA
1 ATAATAATTTTGTTGCACTAGATAGGATTTATTAAAGCATTTTATACATTTGCACTTACAAC-AA
*
12069410 ATTTTCTATATTAACCTTTAACAATGAATTTTTTCATAATAATCTTAACCTTCTTGATTTTTATT
65 ATTTTCTATATTAACC-TTAACAATGAATTTTTTCATAATAATCTTAACCTACTTGATTTTTATT
12069475 GTT
129 GTT
12069478 AT
1 AT
12069480 GCGAAATTCT
Statistics
Matches: 126, Mismatches: 6, Indels: 3
0.93 0.04 0.02
Matches are distributed among these distances:
130 34 0.27
131 41 0.33
132 51 0.40
ACGTcount: A:0.33, C:0.12, G:0.08, T:0.47
Consensus pattern (131 bp):
ATAATAATTTTGTTGCACTAGATAGGATTTATTAAAGCATTTTATACATTTGCACTTACAACAAA
TTTTCTATATTAACCTTAACAATGAATTTTTTCATAATAATCTTAACCTACTTGATTTTTATTGT
T
Found at i:12070943 original size:14 final size:13
Alignment explanation
Indices: 12070913--12070955 Score: 59
Period size: 13 Copynumber: 3.2 Consensus size: 13
12070903 TATTCTTAAC
12070913 TTTTAAGACTATGT
1 TTTTAAGA-TATGT
*
12070927 TTTCAAGATATGT
1 TTTTAAGATATGT
*
12070940 TTTTAAGTTATGT
1 TTTTAAGATATGT
12070953 TTT
1 TTT
12070956 AAAGCTAAGT
Statistics
Matches: 26, Mismatches: 3, Indels: 1
0.87 0.10 0.03
Matches are distributed among these distances:
13 19 0.73
14 7 0.27
ACGTcount: A:0.26, C:0.05, G:0.14, T:0.56
Consensus pattern (13 bp):
TTTTAAGATATGT
Found at i:12070967 original size:26 final size:27
Alignment explanation
Indices: 12070913--12070968 Score: 69
Period size: 26 Copynumber: 2.1 Consensus size: 27
12070903 TATTCTTAAC
* *
12070913 TTTTAAGACTATGTTTTCAAGATATGT
1 TTTTAAGACTATGTTTTAAAGATAAGT
* *
12070940 TTTTAAG-TTATGTTTTAAAGCTAAGT
1 TTTTAAGACTATGTTTTAAAGATAAGT
12070966 TTT
1 TTT
12070969 ATGTGAGCTC
Statistics
Matches: 25, Mismatches: 4, Indels: 1
0.83 0.13 0.03
Matches are distributed among these distances:
26 18 0.72
27 7 0.28
ACGTcount: A:0.29, C:0.05, G:0.14, T:0.52
Consensus pattern (27 bp):
TTTTAAGACTATGTTTTAAAGATAAGT
Found at i:12073465 original size:21 final size:24
Alignment explanation
Indices: 12073431--12073486 Score: 77
Period size: 22 Copynumber: 2.5 Consensus size: 24
12073421 TATGTACAAT
12073431 AAATAAC-A-AATGAT-ACAAATA
1 AAATAACAATAATGATAACAAATA
12073452 AAA-AA-AATAATGATAACAAATA
1 AAATAACAATAATGATAACAAATA
12073474 AAATAACAATAAT
1 AAATAACAATAAT
12073487 AATCATGACA
Statistics
Matches: 30, Mismatches: 0, Indels: 7
0.81 0.00 0.19
Matches are distributed among these distances:
20 3 0.10
21 9 0.30
22 10 0.33
23 2 0.07
24 6 0.20
ACGTcount: A:0.70, C:0.07, G:0.04, T:0.20
Consensus pattern (24 bp):
AAATAACAATAATGATAACAAATA
Found at i:12073488 original size:21 final size:22
Alignment explanation
Indices: 12073431--12073488 Score: 66
Period size: 21 Copynumber: 2.7 Consensus size: 22
12073421 TATGTACAAT
12073431 AAATAACAAATGAT-ACAAATAA
1 AAATAAC-AATGATAACAAATAA
* *
12073453 AAAAAATAATGATAACAAAT-A
1 AAATAACAATGATAACAAATAA
*
12073474 AAATAACAATAATAA
1 AAATAACAATGATAA
12073489 TCATGACAAT
Statistics
Matches: 30, Mismatches: 5, Indels: 3
0.79 0.13 0.08
Matches are distributed among these distances:
21 19 0.63
22 11 0.37
ACGTcount: A:0.71, C:0.07, G:0.03, T:0.19
Consensus pattern (22 bp):
AAATAACAATGATAACAAATAA
Found at i:12073608 original size:8 final size:8
Alignment explanation
Indices: 12073583--12073622 Score: 62
Period size: 8 Copynumber: 4.8 Consensus size: 8
12073573 ATTAAGGATT
12073583 AAATAATA
1 AAATAATA
12073591 ATATATAATA
1 A-A-ATAATA
12073601 AAATAATA
1 AAATAATA
12073609 AAATAATA
1 AAATAATA
12073617 AAATAA
1 AAATAA
12073623 AGCACAAAAC
Statistics
Matches: 30, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
8 21 0.70
9 2 0.07
10 7 0.23
ACGTcount: A:0.72, C:0.00, G:0.00, T:0.28
Consensus pattern (8 bp):
AAATAATA
Found at i:12073852 original size:22 final size:22
Alignment explanation
Indices: 12073799--12073872 Score: 64
Period size: 21 Copynumber: 3.3 Consensus size: 22
12073789 ATAAAGGGAC
12073799 AATAAAAAAATGAATAAAATTA
1 AATAAAAAAATGAATAAAATTA
*
12073821 AAT-AACAAAT-AA-AATAATTCA
1 AATAAAAAAATGAATAA-AATT-A
* *
12073842 AATAAAAAAATTGGGATCAAATTA
1 AATAAAAAAA-T-GAATAAAATTA
12073866 AATAAAA
1 AATAAAA
12073873 TAAAAATATT
Statistics
Matches: 41, Mismatches: 4, Indels: 12
0.72 0.07 0.21
Matches are distributed among these distances:
19 2 0.05
20 6 0.15
21 10 0.24
22 8 0.20
23 1 0.02
24 8 0.20
25 5 0.12
26 1 0.02
ACGTcount: A:0.68, C:0.04, G:0.05, T:0.23
Consensus pattern (22 bp):
AATAAAAAAATGAATAAAATTA
Found at i:12073873 original size:29 final size:29
Alignment explanation
Indices: 12073841--12073901 Score: 81
Period size: 29 Copynumber: 2.1 Consensus size: 29
12073831 AAAATAATTC
12073841 AAATAAAAAAATT-GGGATC-AAATTAAATA
1 AAATAAAAAAATTAGGG-TCTAAATTAAA-A
*
12073870 AAATAAAAATATTAGGGTCTAAATTAAAA
1 AAATAAAAAAATTAGGGTCTAAATTAAAA
12073899 AAA
1 AAA
12073902 CAGAAATAAA
Statistics
Matches: 29, Mismatches: 1, Indels: 4
0.85 0.03 0.12
Matches are distributed among these distances:
29 18 0.62
30 11 0.38
ACGTcount: A:0.62, C:0.03, G:0.10, T:0.25
Consensus pattern (29 bp):
AAATAAAAAAATTAGGGTCTAAATTAAAA
Found at i:12074843 original size:26 final size:26
Alignment explanation
Indices: 12074805--12074872 Score: 127
Period size: 26 Copynumber: 2.6 Consensus size: 26
12074795 CTTAATTGCT
12074805 AAAAAAATGCGTGTCTGAATGTTATTA
1 AAAAAAAT-CGTGTCTGAATGTTATTA
12074832 AAAAAAATCGTGTCTGAATGTTATTA
1 AAAAAAATCGTGTCTGAATGTTATTA
12074858 AAAAAAATCGTGTCT
1 AAAAAAATCGTGTCT
12074873 TTTACATTCG
Statistics
Matches: 41, Mismatches: 0, Indels: 1
0.98 0.00 0.02
Matches are distributed among these distances:
26 33 0.80
27 8 0.20
ACGTcount: A:0.43, C:0.09, G:0.16, T:0.32
Consensus pattern (26 bp):
AAAAAAATCGTGTCTGAATGTTATTA
Found at i:12087613 original size:42 final size:42
Alignment explanation
Indices: 12087519--12087669 Score: 155
Period size: 42 Copynumber: 3.6 Consensus size: 42
12087509 ACATCGGCTT
* * ** **
12087519 ATAGCCTGCTAAGCCGAAGCTTGAG-T-TTTGACACTGGCTT
1 ATAGCCTGCTAAGCCGTAGCTTGAGTTCTTTTACACCAGCAC
* * *
12087559 GTAGCCTGCTAAGCTGTAGCTTGAGTT-TTATTACACCCGCAC
1 ATAGCCTGCTAAGCCGTAGCTTGAGTTCTT-TTACACCAGCAC
* * **
12087601 ATAGCCTGCTAAGCCGTAGTTTGAATTCTTTTACACCAGCTT
1 ATAGCCTGCTAAGCCGTAGCTTGAGTTCTTTTACACCAGCAC
12087643 ATAGCCTGCTAAGCCGTAGCTTGAGTT
1 ATAGCCTGCTAAGCCGTAGCTTGAGTT
12087670 GATTCAAACA
Statistics
Matches: 91, Mismatches: 17, Indels: 4
0.81 0.15 0.04
Matches are distributed among these distances:
40 22 0.24
41 3 0.03
42 64 0.70
43 2 0.02
ACGTcount: A:0.23, C:0.24, G:0.22, T:0.32
Consensus pattern (42 bp):
ATAGCCTGCTAAGCCGTAGCTTGAGTTCTTTTACACCAGCAC
Found at i:12088885 original size:24 final size:24
Alignment explanation
Indices: 12088849--12088896 Score: 87
Period size: 24 Copynumber: 2.0 Consensus size: 24
12088839 AGAAAGGGTT
*
12088849 TGGATACTGTTTCCTCATGAGTTC
1 TGGATACTATTTCCTCATGAGTTC
12088873 TGGATACTATTTCCTCATGAGTTC
1 TGGATACTATTTCCTCATGAGTTC
12088897 CTCGGTTTCC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
24 23 1.00
ACGTcount: A:0.19, C:0.21, G:0.19, T:0.42
Consensus pattern (24 bp):
TGGATACTATTTCCTCATGAGTTC
Found at i:12092485 original size:21 final size:22
Alignment explanation
Indices: 12092461--12092519 Score: 59
Period size: 21 Copynumber: 2.8 Consensus size: 22
12092451 GAATAGTGCA
12092461 GACTTCTACCAATACAAGT-AT
1 GACTTCTACCAATACAAGTCAT
* * *
12092482 GACTCCTACCAAAACATGTCAT
1 GACTTCTACCAATACAAGTCAT
* *
12092504 G-CTTCTATCGATACAA
1 GACTTCTACCAATACAA
12092520 AAAACTCCAG
Statistics
Matches: 29, Mismatches: 8, Indels: 2
0.74 0.21 0.05
Matches are distributed among these distances:
21 26 0.90
22 3 0.10
ACGTcount: A:0.36, C:0.27, G:0.10, T:0.27
Consensus pattern (22 bp):
GACTTCTACCAATACAAGTCAT
Found at i:12105797 original size:216 final size:223
Alignment explanation
Indices: 12105415--12105857 Score: 787
Period size: 216 Copynumber: 2.0 Consensus size: 223
12105405 GGCGGAGGCA
12105415 AAGAGAAAGTTTTAGAAGAAGTCTTCTTACTGAATCTCTGGACCTCTTTTCCCTCTATCTTTGTG
1 AAGAGAAAGTTTTAGAAGAAGTCTTCTTACTGAATCTCTGGACCTCTTTTCCCTCTATCTTTGTG
12105480 GTTGTAAATTTCCTCCATTTTTTATGCTCGGTCTATCAACACTATAAATAGTCGTAATTTTGAAA
66 GTTGTAAATTTCCTCCATTTTTTATGC-C-GTCTATCAACACTATAAATAGTCGTAATTTTGAAA
12105545 AGCCCACCATCATTTTAATTTCATCATTACCCGTCTTCAAAACAGATACACATAGACTGTGTAAC
129 AGCCCACCATCATTTTAATTTCATCATTACCCGTCTTCAAAACAGATACACATAGACTGTGTAAC
12105610 AA-CCATTTTTCAGTATTGTCGAAAATAAT
194 AACCCATTTTTCAGTATTGTCGAAAATAAT
12105639 AAGAGAAAGTTTTAGAAGAAGTCTTCTTACTGAATTCTCTGGA-C-CTTTTCCCTC-AT-TTTGT
1 AAGAGAAAGTTTTAGAAGAAGTCTTCTTACTGAA-TCTCTGGACCTCTTTTCCCTCTATCTTTGT
12105700 GGTTGTAAATTTCCTCCA-TTTTTATG-C-TCTATCAACACTATAAATAGTCGTAATTTTGAAAA
65 GGTTGTAAATTTCCTCCATTTTTTATGCCGTCTATCAACACTATAAATAGTCGTAATTTTGAAAA
12105762 G-CCACCATCATTTTAATTTCATCATTTACCCGTCTTCAAAACAGATACACATAGACTGTGTAAC
130 GCCCACCATCATTTTAATTTCATCA-TTACCCGTCTTCAAAACAGATACACATAGACTGTGTAAC
12105826 AACCCATTTTTCAGTATTGTCGAAAATAAT
194 AACCCATTTTTCAGTATTGTCGAAAATAAT
12105856 AA
1 AA
12105858 TTTCGGGACC
Statistics
Matches: 216, Mismatches: 0, Indels: 13
0.94 0.00 0.06
Matches are distributed among these distances:
215 23 0.11
216 77 0.36
217 29 0.13
218 1 0.00
220 8 0.04
221 23 0.11
222 2 0.01
223 10 0.05
224 35 0.16
225 8 0.04
ACGTcount: A:0.31, C:0.20, G:0.12, T:0.37
Consensus pattern (223 bp):
AAGAGAAAGTTTTAGAAGAAGTCTTCTTACTGAATCTCTGGACCTCTTTTCCCTCTATCTTTGTG
GTTGTAAATTTCCTCCATTTTTTATGCCGTCTATCAACACTATAAATAGTCGTAATTTTGAAAAG
CCCACCATCATTTTAATTTCATCATTACCCGTCTTCAAAACAGATACACATAGACTGTGTAACAA
CCCATTTTTCAGTATTGTCGAAAATAAT
Found at i:12108013 original size:192 final size:194
Alignment explanation
Indices: 12107660--12108097 Score: 469
Period size: 192 Copynumber: 2.3 Consensus size: 194
12107650 AACCGACGCA
* * * * *
12107660 ATGGCTAAGGTATCACATGTGTTACGGGTCCTCGACAGCTCGTGTGAGCAGCATCGTGAGTCAGG
1 ATGGCTGAGGTATCGCATGTGTTGCGAGTCCTCGACAGCTCGTGTGAGCAGAATCGTGAGTCA-G
* * * * *
12107725 AAATGAGTAAAGAATCCAAGAATGGATTATAGCCCTTACGATGGCTGAGATTTATGCATAAGTGC
65 AAAAGAGTAAAGAATCCAAGAATAGATTAAAGCCCTTACGATGGCTGAAACTTATGCATAAGTGC
** * * *
12107790 ATATTCTCGACAGCTAGTGTGAGTCGCATCGTTAGG-GAACAGTTATAT-GCACAGATACCATAT
130 ATAACCTCGACAGCTAGTGTGAGTCGCATCGTTAGGAG-ACAGTTATATAG-ACAAACACCATAC
12107853 CG
193 CG
* * * *
12107855 ATGGCTGAGGTACCGCATGTGTTGCGAGTTCTCGACAGCTCGTGTGAGTAGAATTGTGAGTC-GA
1 ATGGCTGAGGTATCGCATGTGTTGCGAGTCCTCGACAGCTCGTGTGAGCAGAATCGTGAGTCAGA
* * * * *
12107919 AAAGAG-ATATGACTCCTAGGATAGATTAAAGCCC-TGCGATGGCTGAAACTTATGCATAAGTGC
66 AAAGAGTA-AAGAATCCAAGAATAGATTAAAGCCCTTACGATGGCTGAAACTTATGCATAAGTGC
* * * *
12107982 ATACACCT-GATAGCTCGTGTGAG-CAGCATCGTTAGGAGACTGTTATATAGACAAACACCGTAC
130 ATA-ACCTCGACAGCTAGTGTGAGTC-GCATCGTTAGGAGACAGTTATATAGACAAACACCATAC
12108045 CG
193 CG
* * * *
12108047 ATGGTTGGGGTATCGCATATGTTG-GAAGTCCTTGACAGCTCGTGTGAGCAG
1 ATGGCTGAGGTATCGCATGTGTTGCG-AGTCCTCGACAGCTCGTGTGAGCAG
12108098 CATTGGGTAC
Statistics
Matches: 202, Mismatches: 35, Indels: 15
0.80 0.14 0.06
Matches are distributed among these distances:
191 2 0.01
192 116 0.57
193 31 0.15
195 53 0.26
ACGTcount: A:0.28, C:0.18, G:0.28, T:0.26
Consensus pattern (194 bp):
ATGGCTGAGGTATCGCATGTGTTGCGAGTCCTCGACAGCTCGTGTGAGCAGAATCGTGAGTCAGA
AAAGAGTAAAGAATCCAAGAATAGATTAAAGCCCTTACGATGGCTGAAACTTATGCATAAGTGCA
TAACCTCGACAGCTAGTGTGAGTCGCATCGTTAGGAGACAGTTATATAGACAAACACCATACCG
Found at i:12114255 original size:17 final size:18
Alignment explanation
Indices: 12114233--12114271 Score: 71
Period size: 18 Copynumber: 2.2 Consensus size: 18
12114223 ATTGAAGTCA
12114233 AATTAACTTT-AGGGGTG
1 AATTAACTTTAAGGGGTG
12114250 AATTAACTTTAAGGGGTG
1 AATTAACTTTAAGGGGTG
12114268 AATT
1 AATT
12114272 TGTACTACCC
Statistics
Matches: 21, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
17 10 0.48
18 11 0.52
ACGTcount: A:0.33, C:0.05, G:0.26, T:0.36
Consensus pattern (18 bp):
AATTAACTTTAAGGGGTG
Found at i:12117461 original size:24 final size:24
Alignment explanation
Indices: 12117425--12117472 Score: 80
Period size: 24 Copynumber: 2.0 Consensus size: 24
12117415 AGAAAAGGTT
12117425 TGGATACAGTTTCCTCATGAGTTC
1 TGGATACAGTTTCCTCATGAGTTC
12117449 TGGATACTA-TTTCCTCATGAGTTC
1 TGGATAC-AGTTTCCTCATGAGTTC
12117473 CTCGGTTTCC
Statistics
Matches: 23, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
24 22 0.96
25 1 0.04
ACGTcount: A:0.21, C:0.21, G:0.19, T:0.40
Consensus pattern (24 bp):
TGGATACAGTTTCCTCATGAGTTC
Found at i:12141168 original size:21 final size:22
Alignment explanation
Indices: 12141144--12141188 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 22
12141134 TATCTTAAGA
* *
12141144 TATTTAATTGTA-TTGATATTT
1 TATTTAATTGCATTTCATATTT
*
12141165 TATTTATTTGCATTTCATATTT
1 TATTTAATTGCATTTCATATTT
12141187 TA
1 TA
12141189 CCTTGAATTT
Statistics
Matches: 20, Mismatches: 3, Indels: 1
0.83 0.12 0.04
Matches are distributed among these distances:
21 10 0.50
22 10 0.50
ACGTcount: A:0.27, C:0.04, G:0.07, T:0.62
Consensus pattern (22 bp):
TATTTAATTGCATTTCATATTT
Found at i:12146809 original size:15 final size:15
Alignment explanation
Indices: 12146785--12146814 Score: 51
Period size: 15 Copynumber: 2.0 Consensus size: 15
12146775 TTAACCGAAT
12146785 TAATAAATAATATTA
1 TAATAAATAATATTA
*
12146800 TAATATATAATATTA
1 TAATAAATAATATTA
12146815 GCCCACTACC
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
15 14 1.00
ACGTcount: A:0.57, C:0.00, G:0.00, T:0.43
Consensus pattern (15 bp):
TAATAAATAATATTA
Found at i:12146850 original size:16 final size:16
Alignment explanation
Indices: 12146829--12146859 Score: 62
Period size: 16 Copynumber: 1.9 Consensus size: 16
12146819 ACTACCCAAG
12146829 ACCCAATCCAATATAA
1 ACCCAATCCAATATAA
12146845 ACCCAATCCAATATA
1 ACCCAATCCAATATA
12146860 TATAAACCCA
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 15 1.00
ACGTcount: A:0.48, C:0.32, G:0.00, T:0.19
Consensus pattern (16 bp):
ACCCAATCCAATATAA
Found at i:12147491 original size:36 final size:36
Alignment explanation
Indices: 12147441--12147510 Score: 122
Period size: 36 Copynumber: 1.9 Consensus size: 36
12147431 CTCCCAAACT
* *
12147441 TGATTAAAGTAATCATACTTACATCGGTGTAAGTTA
1 TGATTAAAGAAATCATACTTACACCGGTGTAAGTTA
12147477 TGATTAAAGAAATCATACTTACACCGGTGTAAGT
1 TGATTAAAGAAATCATACTTACACCGGTGTAAGT
12147511 AAGTTGTTTT
Statistics
Matches: 32, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
36 32 1.00
ACGTcount: A:0.37, C:0.13, G:0.17, T:0.33
Consensus pattern (36 bp):
TGATTAAAGAAATCATACTTACACCGGTGTAAGTTA
Found at i:12147897 original size:18 final size:18
Alignment explanation
Indices: 12147887--12147925 Score: 62
Period size: 18 Copynumber: 2.2 Consensus size: 18
12147877 AATTCAGTTA
12147887 AATT-GATTAATTCGAGT
1 AATTCGATTAATTCGAGT
*
12147904 AATTCGATTAATTCGAAT
1 AATTCGATTAATTCGAGT
12147922 AATT
1 AATT
12147926 TTTATACCAA
Statistics
Matches: 20, Mismatches: 1, Indels: 1
0.91 0.05 0.05
Matches are distributed among these distances:
17 4 0.20
18 16 0.80
ACGTcount: A:0.38, C:0.08, G:0.13, T:0.41
Consensus pattern (18 bp):
AATTCGATTAATTCGAGT
Found at i:12156080 original size:485 final size:485
Alignment explanation
Indices: 12155087--12156083 Score: 1935
Period size: 485 Copynumber: 2.1 Consensus size: 485
12155077 AAATGACCTC
12155087 GTAAATATTAAATAAATAATATTTACGACCTGACACATTGAAGTTGTGGCCTCGAAACCACCATT
1 GTAAATATTAAATAAATAATATTTACGACCTGACACATTGAAGTTGTGGCCTCGAAACCACCATT
*
12155152 CCCGATCGTACAAAAAATAAACTAATTAGTAAATCCTCATTTAATTAGGATTTAATTACAATTTA
66 CCCGATCGTACAAAAAATAAACTAATTAGTAAATCCTCATTTAATTAGGACTTAATTACAATTTA
12155217 CCCAAAATCTAAAGATTCCCACCCCATTTCTATTATTAGACTACTTAAGGAGGGTTTAATTTCAT
131 CCCAAAATCTAAAGATTCCCACCCCATTTCTATTATTAGACTACTTAAGGAGGGTTTAATTTCAT
12155282 AATTGGTCCTTCAATTATATTGAATTTCAATTAAACAAACTTAATTCCAATTTAGTCCTAAACTA
196 AATTGGTCCTTCAATTATATTGAATTTCAATTAAACAAACTTAATTCCAATTTAGTCCTAAACTA
12155347 ATTAGGACTAAAAGAATAAATAACCCAAAAGTTAGTGGATGATAATCATGTCACCCACCGCTTGG
261 ATTAGGACTAAAAGAATAAATAACCCAAAAGTTAGTGGATGATAATCATGTCACCCACCGCTTGG
12155412 ACTTTTTGACCATGGTTTAATTACCATTTTGGTACTTTACTATTTTTAATCTATAGCAATTAACT
326 ACTTTTTGACCATGGTTTAATTACCATTTTGGTACTTTACTATTTTTAATCTATAGCAATTAACT
12155477 TCTACCTCTTTTACAATTTACTTCTTTTTCCTTAATTAAGCAATTAATTATCAAAATTATCCAAC
391 TCTACCTCTTTTACAATTTACTTCTTTTTCCTTAATTAAGCAATTAATTATCAAAATTATCCAAC
12155542 CAAACTTCAATTCACATATAATAAGACTCT
456 CAAACTTCAATTCACATATAATAAGACTCT
12155572 GTAAATATTAAATAAATAATATTTACGACCTGACACATTGAAGTTGTGGCCTCGAAACCACCATT
1 GTAAATATTAAATAAATAATATTTACGACCTGACACATTGAAGTTGTGGCCTCGAAACCACCATT
12155637 CCCGATCGTACAAAAAATAAACTAATTAGTAAATCCTCATTTAATTAGGACTTAATTACAATTTA
66 CCCGATCGTACAAAAAATAAACTAATTAGTAAATCCTCATTTAATTAGGACTTAATTACAATTTA
12155702 CCCAAAATCTAAAGATTCCCACCCCATTTCTATTATTAGACTACTTAAGGAGGGTTTAATTTCAT
131 CCCAAAATCTAAAGATTCCCACCCCATTTCTATTATTAGACTACTTAAGGAGGGTTTAATTTCAT
12155767 AATTGGTCCTTCAATTATATTGAATTTCAATTAAACAAACTTAATTCCAATTTAGTCCTAAACTA
196 AATTGGTCCTTCAATTATATTGAATTTCAATTAAACAAACTTAATTCCAATTTAGTCCTAAACTA
*
12155832 ATTAGGACTAAAAGAATAAATAACCCAAAAGTTAGTGGATGGTAATCATGTCA-CCACCGCTTGG
261 ATTAGGACTAAAAGAATAAATAACCCAAAAGTTAGTGGATGATAATCATGTCACCCACCGCTTGG
12155896 ACTTTTTTGACCATGGTTTAATTACCATTTTGGTACCTTTACTATTTTTAATCTATAGCAATTAA
326 AC-TTTTTGACCATGGTTTAATTACCATTTTGGTA-CTTTACTATTTTTAATCTATAGCAATTAA
12155961 CTTCTACCTCTTTTACAATTTACTTCTTTTTCCTTAATTAAGCAATTAATTATCAAAATTATCCA
389 CTTCTACCTCTTTTACAATTTACTTCTTTTTCCTTAATTAAGCAATTAATTATCAAAATTATCCA
12156026 ACCAAACTTCAATTCACATATAATAAGACTCT
454 ACCAAACTTCAATTCACATATAATAAGACTCT
*
12156058 GTAAATATTTAATAAA-AATATTTACG
1 GTAAATATTAAATAAATAATATTTACG
12156084 GCTCTTAATT
Statistics
Matches: 507, Mismatches: 3, Indels: 4
0.99 0.01 0.01
Matches are distributed among these distances:
484 13 0.03
485 353 0.70
486 141 0.28
ACGTcount: A:0.37, C:0.18, G:0.09, T:0.36
Consensus pattern (485 bp):
GTAAATATTAAATAAATAATATTTACGACCTGACACATTGAAGTTGTGGCCTCGAAACCACCATT
CCCGATCGTACAAAAAATAAACTAATTAGTAAATCCTCATTTAATTAGGACTTAATTACAATTTA
CCCAAAATCTAAAGATTCCCACCCCATTTCTATTATTAGACTACTTAAGGAGGGTTTAATTTCAT
AATTGGTCCTTCAATTATATTGAATTTCAATTAAACAAACTTAATTCCAATTTAGTCCTAAACTA
ATTAGGACTAAAAGAATAAATAACCCAAAAGTTAGTGGATGATAATCATGTCACCCACCGCTTGG
ACTTTTTGACCATGGTTTAATTACCATTTTGGTACTTTACTATTTTTAATCTATAGCAATTAACT
TCTACCTCTTTTACAATTTACTTCTTTTTCCTTAATTAAGCAATTAATTATCAAAATTATCCAAC
CAAACTTCAATTCACATATAATAAGACTCT
Found at i:12156390 original size:51 final size:50
Alignment explanation
Indices: 12156313--12156449 Score: 150
Period size: 51 Copynumber: 2.7 Consensus size: 50
12156303 TATTACAAGT
* *
12156313 TACGAAACCAAATCTTATATCCCTGAAGTTGCAGTGGA-TCGGATTGAAGC
1 TACGAAACCAAATCTTATATCCCTGAAGTTGCAGTAGAGTAGGA-TGAAGC
* * *
12156363 TACGAAAGCGAATCCTTATATCTCTGAAGTTGCAGTAGAGTAGGATGAAGC
1 TACGAAACCAAAT-CTTATATCCCTGAAGTTGCAGTAGAGTAGGATGAAGC
* * * * *
12156414 TACAAAACTAAATCCTATACCCCCTAAAGTTGCAGT
1 TACGAAACCAAATCTTATA-TCCCTGAAGTTGCAGT
12156450 GGGTTAGATT
Statistics
Matches: 71, Mismatches: 13, Indels: 5
0.80 0.15 0.06
Matches are distributed among these distances:
50 16 0.23
51 51 0.72
52 4 0.06
ACGTcount: A:0.34, C:0.20, G:0.20, T:0.26
Consensus pattern (50 bp):
TACGAAACCAAATCTTATATCCCTGAAGTTGCAGTAGAGTAGGATGAAGC
Found at i:12157949 original size:27 final size:27
Alignment explanation
Indices: 12157919--12157971 Score: 65
Period size: 27 Copynumber: 2.0 Consensus size: 27
12157909 TTTTTATTTT
12157919 TTTATGTTCATATTA-TTTTA-TTCATTA
1 TTTAT-TT-ATATTACTTTTATTTCATTA
*
12157946 TTTATTTTTATTACTTTTATTTCATT
1 TTTATTTATATTACTTTTATTTCATT
12157972 CATTAAATTT
Statistics
Matches: 23, Mismatches: 1, Indels: 4
0.82 0.04 0.14
Matches are distributed among these distances:
25 5 0.22
26 7 0.30
27 11 0.48
ACGTcount: A:0.23, C:0.08, G:0.02, T:0.68
Consensus pattern (27 bp):
TTTATTTATATTACTTTTATTTCATTA
Found at i:12159541 original size:20 final size:21
Alignment explanation
Indices: 12159508--12159549 Score: 61
Period size: 21 Copynumber: 2.0 Consensus size: 21
12159498 AGTAATAAAA
12159508 TAATTATTAGTG-AAAATAAT
1 TAATTATTAGTGAAAAATAAT
12159528 TAATT-TTAGTTGAAAAATAAT
1 TAATTATTAG-TGAAAAATAAT
12159549 T
1 T
12159550 TTAAAATAAT
Statistics
Matches: 20, Mismatches: 0, Indels: 3
0.87 0.00 0.13
Matches are distributed among these distances:
19 4 0.20
20 7 0.35
21 9 0.45
ACGTcount: A:0.48, C:0.00, G:0.10, T:0.43
Consensus pattern (21 bp):
TAATTATTAGTGAAAAATAAT
Found at i:12159550 original size:17 final size:17
Alignment explanation
Indices: 12159468--12159552 Score: 61
Period size: 19 Copynumber: 4.8 Consensus size: 17
12159458 AATAATCCGA
*
12159468 AAAAAATTATTTT--TG
1 AAAAAATAATTTTAGTG
*
12159483 AAAAATTAATTTTAAAGT-
1 AAAAAATAATTTT--AGTG
12159501 AATAAAATAATTATTAGTG
1 AA-AAAATAATT-TTAGTG
12159520 AAAATAATTAATTTTAGTTG
1 AAAA-AA-TAATTTTAG-TG
12159540 -AAAAATAATTTTA
1 AAAAAATAATTTTA
12159553 AAATAATTTT
Statistics
Matches: 57, Mismatches: 3, Indels: 18
0.73 0.04 0.23
Matches are distributed among these distances:
15 11 0.19
17 8 0.14
18 9 0.16
19 20 0.35
20 9 0.16
ACGTcount: A:0.52, C:0.00, G:0.07, T:0.41
Consensus pattern (17 bp):
AAAAAATAATTTTAGTG
Done.