Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: CP032253.1 Gossypioides kirkii chromosome KI_11
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 55708359
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 2600 characters in sequence are not A, C, G, or T
File 100 of 182
Found at i:33018853 original size:351 final size:351
Alignment explanation
Indices: 33018210--33018878 Score: 926
Period size: 351 Copynumber: 1.9 Consensus size: 351
33018200 ATGGTCTTTA
*
33018210 AATTAAAAACTTATATACGGTAGAATTGTTTCCGTCTTGGTTCTTGGAAGAACTTCCAACTTGTC
1 AATTAAAAACTTATATACGGTAGAATTATTTCCGTCTTGGTTCTTGGAAGAACTTCCAACTTGTC
* *
33018275 AAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTAAAACATTCAAGATGATCCATTCCTTCTAG
66 AAACTTTTACGAGTTCTTTTATAACTTCGATTCCTAAAACATTCAAGACGATCCATTCCTTCTAG
* * * * * * * * *
33018340 TAATTTTTCGAACATTCCTTGCTCGGAAATTGCATCATCTGGTCTAAATATTTTGTCATTTTCTA
131 CAATTTCTCAAACATTCCATGCTCGGAAATCGCACCATCTGATCTAAATACTCTGTCATTTTCTA
*
33018405 AACAAGTTTTGGTCTTCGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTTGTTCTTGG
196 AACAAGTTTTGGTCTTCAAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTTGTTCTTGG
*
33018470 TCGAACTTTCGAACATGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCATAAAAGTTGTC
261 TCGAACTTTCGAACATGTCAAACTTCTACGAGTTCTTTTATAACTTCGGTTCCATAAAAGTTGTC
33018535 GTTTTGTAAACAAATTTTGGTGGTTC
326 GTTTTGTAAACAAATTTTGGTGGTTC
* * * **
33018561 AATTAAAAACTTATATACGCG-AGAATTATTTCTC-TCTTTGTTCTT-GACGAGCTTTTGAACTT
1 AATTAAAAACTTATATACG-GTAGAATTATTTC-CGTCTTGGTTCTTGGAAGAAC-TTCCAACTT
* **
33018623 GTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTGTAAGTATTCAAGACGATCCATTCCTT
63 GTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCT-AAAACATTCAAGACGATCCATTCCTT
*
33018688 AC-AGCAATTTCT-AAACATTCCATGCTCCGGAAATCGCACCATTTGATCT-AATACTCTGTCAT
127 -CTAGCAATTTCTCAAACATTCCATGCT-CGGAAATCGCACCATCTGATCTAAATACTCTGTCAT
* *
33018750 TTTGTAAACAAGTTTTGGTC-TCTAAATTAAAAACTTATATATGTGAGAATTGTTTCTCTC-TTG
190 TTTCTAAACAAGTTTTGGTCTTC-AAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTTG
* * *
33018813 ATTCTTGGAT-GAACTTTGGAAC-TAGTCAAACTTCTACGAGTTCTTTTATAGCTTCGGTTCCTT
254 -TTCTTGG-TCGAACTTTCGAACAT-GTCAAACTTCTACGAGTTCTTTTATAACTTCGGTTCCAT
33018876 AAA
316 AAA
33018879 TTATTCAAGA
Statistics
Matches: 280, Mismatches: 28, Indels: 20
0.85 0.09 0.06
Matches are distributed among these distances:
350 11 0.04
351 217 0.77
352 51 0.18
353 1 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (351 bp):
AATTAAAAACTTATATACGGTAGAATTATTTCCGTCTTGGTTCTTGGAAGAACTTCCAACTTGTC
AAACTTTTACGAGTTCTTTTATAACTTCGATTCCTAAAACATTCAAGACGATCCATTCCTTCTAG
CAATTTCTCAAACATTCCATGCTCGGAAATCGCACCATCTGATCTAAATACTCTGTCATTTTCTA
AACAAGTTTTGGTCTTCAAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTTGTTCTTGG
TCGAACTTTCGAACATGTCAAACTTCTACGAGTTCTTTTATAACTTCGGTTCCATAAAAGTTGTC
GTTTTGTAAACAAATTTTGGTGGTTC
Found at i:33019018 original size:216 final size:216
Alignment explanation
Indices: 33018530--33024852 Score: 4153
Period size: 216 Copynumber: 28.9 Consensus size: 216
33018520 TCCATAAAAG
* * ** * * *
33018530 TTGTCGTTTTGTAAACAAATTTTGGTGGTTCAATTAAAAACTTATATACGCGAGAATTATTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * *
33018595 TCTTTGTTCTT-GACGAGCTTTTGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * *
33018659 CTGT-AAGTATTCAAGACGATCCATTCCTTACAGCAA-TTTCTAAACATTCCATGCTCCGGAAAT
131 CT-TAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAAT
* *
33018722 CGCACCATTTGATCT-AATACT
195 CGCATCATTTGATCTAAATAGT
* * * *
33018743 CTGTCATTTTGTAAACAAGTTTTGGTCTCTAAATTAAAAACTTATATATGTGAGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * *
33018808 TCTTGATTCTTGGATGAACTTTGGAACTAGTCAAACTTCTACGAGTTCTTTTATAGCTTCGGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * **
33018873 CTTAAATTATTCAAGATGATCCATTCCTTCCAGTAATTTTCTGAACATTACATGCTCAAGAAATC
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAATC
*
33018938 GCATCATTTGGTCTAAATAGT
196 GCATCATTTGATCTAAATAGT
* * ** * *
33018959 TTGTGATTTTGTAAACAAGTTTTGGTCATCAAATTAAAAACTTATATACCTGTGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
33019024 TCTTGGTTCTT-GATCGAACTTTTC-AACTTGTC-AACTTTTACGAGTGT-TTTTATAACTTCGG
66 TCTTGGTTCTTGGAT-GAAC-TTTCGAACTTGTCAAACTTTTACGAGT-TCTTTTATAACTTCGG
** * * * * *
33019085 TTCCTTAAAACATTCAAGACGATGCATTCCTTCCAGCAGTTTATC-GAGCATTCCATGCTCAGGA
128 TTCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTT-TCTGAACATTCCATGCTCGGGA
* * *
33019149 AATCGCGTCATTTGGTTTAAA-AGT
192 AATCGCATCATTTGATCTAAATAGT
* * *
33019173 TTGTCATTTTGTAAACACA-TTTTGGTCATTGAATTAAAAACTTATATACGCGAGAATTATTTCT
1 TTGTCATTTTGTAAACA-AGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCT
* * * *
33019237 CTCTTTGTTCTTGGACGAGC-TTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
65 CTCTTGGTTCTTGGATGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGG-
* * * * * **
33019301 TTCCTTAAAGTATTCAAGA-CATTCATTCCTTACAGTAATTTT-TCGTACATTCCATGCTCAAGA
128 TTCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCT-GAACATTCCATGCTCGGGA
* * *
33019364 AATCGCATAATTTGATCTCAATAAT
192 AATCGCATCATTTGATCTAAATAGT
* * * * *
33019389 TTGTCAATTTGTAAAGATGTTTTGGTCTTTGAATTAAAAACTTATAAACGTGAGAATTGTTTCCC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * *
33019454 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAAATTTTATGAGTTCTTTTATAACTTTGGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * **
33019519 CTTAAAGTATTAAAGATGATCCATTCCTTCGATCTATTTT-TCGAACATTCCATGCTCATGAAAT
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCT-GAACATTCCATGCTCGGGAAAT
*
33019583 CGCAT-TTTTGATCTAAATAGT
195 CGCATCATTTGATCTAAATAGT
* * * * * * * *
33019604 TTGTCATTTTGTAAACTAGTTTTGGCCTTTGAACTAAAATCCTATTTACGGGAGAATTATTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * * * *
33019669 TCCTGGTTCTTGGACGAACCTTCGAACTAGTAAAAGTTTTACGAGTTCTTTTATTACTTCGGTT-
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * * * *
33019733 CTTACAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGGACATTCCAAGCTTGGGAAATT
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAATC
*
33019798 GCATCATTTGATATAAATAGT
196 GCATCATTTGATCTAAATAGT
** * * * * *
33019819 TTGTCATTTTGTAAACAAGTTTTCATTTTTGAATTAAAAACTGATTTCCATGAGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * * *
33019884 TCTTGGTT-TTTGATAAACTTCCGAACCTGTCAAACTTCTACTAGTTCTTTTATAACTTCGGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* *
33019948 CTTAAAGTATTCAAGACGA-CCAATTCCTTCCAGCAATTTT-TCGAACATTCCATGCTCGAGAAA
131 CTTAAAGTATTCAAGATGATCC-ATTCCTTCCAGCAATTTTCT-GAACATTCCATGCTCGGGAAA
* * *
33020011 TCGCATCATTTGGTCCAAACAGT
194 TCGCATCATTTGATCTAAATAGT
* * *
33020034 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATCAAACACTTATATATGTGAGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * ** *
33020099 TCTTGGTTCTTGGACGAACTTTCGAACTAGTCAAACTTCCACGAGTTCTTTTATACCTTCGGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * * **
33020164 CTTAAATTATTCAAGACGATCCATTCCTTCCAGCGATTTTCCGAACATTACATGCTCAAGAAATC
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAATC
*
33020229 GCATCATTTGGTCTAAATAGT
196 GCATCATTTGATCTAAATAGT
* * * * * *
33020250 TTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACGTATATACCTAATAATTGATTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * * * *
33020315 TCTTGGTTCTTCGATGAACTTCCGAAGTTGTCAAACTTTTACTAGTTCTTTTGTAACATCAGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * ** * * *
33020380 CTCAGAGTAGTCGTGATGATCCATTCCTTCAAGCAATTTTCCGAACATAT-CATGCTCGGGATAT
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACAT-TCCATGCTCGGGAAAT
* *
33020444 CGTATCATTTGGTCTAAATAGT
195 CGCATCATTTGATCTAAATAGT
* * * *
33020466 TTATTATTTTGTAAACAAGTTCTT-GTCATCGAATTAAAAACTTATATACGTGAGAATTGTTTCT
1 TTGTCATTTTGTAAACAAGTT-TTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCT
* * *
33020530 CTCTTGGTTCTT-GATCAAACTTTTGAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTCGGT
65 CTCTTGGTTCTTGGAT-GAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGT
** * * ** * **
33020594 TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGC-AGTTT-T-AACGAGTT---TTTTTGTTA
129 TCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAAC-A-TTCCATGCTCGGGA
** * ** * *
33020653 CTTCG-ATTCCTCAGAT-T-ATTCGT
192 AATCGCA-TCATTTGATCTAAATAGT
* * * * ** * ** *
33020676 GATGATCCATTCCTTCAAGTAAAATTCCGAACATATCAT-GCCTGGGATATCTCATCA-TT-TGT
1 -TTG-T-CATT--TT---GT-AAA---C-AA-GT-T-TTGGTCTTTGA-AT-TAAAAACTTATAT
* * * * * ** * ** * **
33020738 TC-T-A-AATAGTTTATCAT-TTTGTAAAC-AAGTTTTAGTCTTCGAA-TT-AAAAACTTATATA
48 ACGTGAGAATTGTTTCTC-TCTTGGT--TCTTGGATGAACT-TTCGAACTTGTCAAACTT-T-TA
** * * * * ** **
33020796 CGCGAGAATTCTTTT-TCTCTT-TGTT-CTTGGACGAGCT-TCCAAACATG-T-CA-AACTTTTA
107 --CGAG--TTCTTTTATAACTTCGGTTCCTT--A-AAG-TATTC-AAGATGATCCATTCCTTCCA
* * ** * * * *
33020854 -CAAGTTCTTTTATAAC-TTCGGTTC-CAGTAAGTATGCAAGACGATCCATTCCT-TTC-AGCAA
163 GCAA-TT-TTCT-GAACATTCCATGCTCGGGAA--AT-C--G-C-AT-CATT--TGATCTA--AA
*
33020914 T-TT
213 TAGT
* **** * * * * ** * **
33020917 TTCGTACATTCCATGCTCGGGAA--ATCGCATAATTTG-ATCTAAATAGTTTGTCATTTTGTGAA
1 TT-GT-CATT--TTG-TAAACAAGTTTTG-GT-CTTTGAAT-TAAA-AACTTAT-A-TACGTG-A
** ** * ** **** *
33020979 GAAGTT-TTGGTCT-TTAATTAAAAGCTT--AT-ATACGTGAGAA-TTGTTTCCCTCTT--G-GT
54 GAA-TTGTTTCTCTCTTGGTT-----CTTGGATGA-ACTTTCGAACTTGTCAAACTTTTACGAGT
** * * ** * * * * * * * * ** ***
33021035 TCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAG
112 TCTT-TTATAACTTCGGTTCCT-T-AAAGTATT-CAAG----ATGAT-CCATTCCTTCCAGCAA-
** * * * ** ** ** * * * *
33021100 TATTAAAGATGACCCATTCC-T-TTAAGCTATTTTTCAAACATTCCACGCA-CATGAAATCGCA
167 T-TT---TCTGA-ACATTCCATGCT-CGGGAAATCGC-ATCATT---TG-ATC-T-AAATAG-T
* * * * *
33021161 TTTTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTCGTTTTTGAATTAAAAACTAATTTA
1 TTG----TC-------------ATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATA
* * * * * *
33021226 CATGAGAATTGTTTCTCTCTTGGTTTTTTGATAAAC-TTCAGAACCTGTCAAACTTTCACGAGTT
49 CGTGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTTC-GAACTTGTCAAACTTTTACGAGTT
* * * *
33021290 CTTTTCTAACTTCAGTTCCTTAAAGTATTCAAGACT-ATCAATTCCTTCCAGCAATTTTTTGAAC
113 CTTTTATAACTTCGGTTCCTTAAAGTATTCAAGA-TGATCCATTCCTTCCAGCAATTTTCTGAAC
* * *
33021354 ATTCCATGCTCGAGAAATCGCGTCATTTGGTCTAAATAGT
177 ATTCCATGCTCGGGAAATCGCATCATTTGATCTAAATAGT
* * *
33021394 TTGTCATTTTGTAAACAAGTTTTTGTCTTTGAATCAAAAACTTATATACGTGAGAATTATTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* *** * * * *
33021459 TCTTGGTTCTTGAATGAAC-TTCGGAACTTGTCAAACTTTGGTGACTTCTTTTATAAGTTTGATT
66 TCTTGGTTCTTGGATGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
** * *
33021523 CCTTAAAACATTCAAGATGATCCATTCCTTCTAG-ATATTTT-TCGAACATTCCAAGCTCGGGAA
130 CCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCA-ATTTTCT-GAACATTCCATGCTCGGGAA
* *
33021586 ATTGCATCATCT-AGTCTAAATAGT
193 ATCGCATCATTTGA-TCTAAATAGT
* *
33021610 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAAGTG-GTAATTGATTCT
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAG-AATTGTTTCT
* * * * * * *
33021674 CTCTTGGTTCTTGGATGAACTTACGAACCTGTCAAACTTTTTCAAGTTCTTTTGTTACTTCAGTT
65 CTCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
* * * ** * ** * *
33021739 CATCAGAGTATTCGTGATGATCCATTCCTTCAAGCAACATTCCGAACATAT-CATGCTCGGGATA
130 CCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACAT-TCCATGCTCGGGAAA
* *
33021803 TCGCATCATTGGGTC-AAATAGT
194 TCGCATCATTTGATCTAAATAGT
* * ** *
33021825 TTGTTATTTTGTAAACAAG-TTTGGTCTTCGAATTAAAAACTTATATACCCGAGAATTATTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * * * *
33021889 TCTTTGTT-TTGGAAGAGC-TTCTAAACATGTCAAACTTTTACGAGTGCTTTTATAACTTCGATT
66 TCTTGGTTCTTGGATGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
** * * *
33021952 CAAGT-AAGCATTCAAGATGATCCATTCCTTTCAGCAATTTT-TGTACATTCCATGCTCGGGAAA
130 C-CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAA
*
33022015 TCGCATCATTTGATCTGAATAGT
194 TCGCATCATTTGATCTAAATAGT
* * *
33022038 TTGTCATTTTGTAAAGAAGTTTTGGTCTTTAAATTAAAAACTTATATACGTGAGAATTGTTTCCC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * *
33022103 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAAGTTTTACGAGTTCTTTTATATCTTTGGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * **
33022168 CTTAAAGTATTAAAGATGATCCATTCCTTCGAGCTATTTT-TCAAACATTCCATGCTCATGAAAT
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCT-GAACATTCCATGCTCGGGAAAT
*
33022232 CGCAT-TTTTGATCTAAATAGT
195 CGCATCATTTGATCTAAATAGT
* * * * *
33022253 TTGTCGTTTTGTAAACTAGTTTTGGTCTTTGAATTAAAATCCTATTTACGTGAGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * ** * * **
33022318 TTTTTGGTTCTTGGACGAACTTTTGAACAAGT-AAGAGTTTTACGAGTTCTTTTATTACTTCAAT
66 -TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAA-ACTTTTACGAGTTCTTTTATAACTTCGGT
* * * * *
33022382 TCCTTATAGTGTTCAAGATGATCCATTCCTTCGAGCAATTTTCT-AACATTCCAAGCTTGGGAAA
129 TCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAA
* * * *
33022446 ACGCATCATGTGATATAATTAGT
194 TCGCATCATTTGATCTAAATAGT
* * * * * *
33022469 TTGTCATTTTGTAAACAAGTTTTCGTTTTTGAATTAAAAACTGATTTACATGAGAATTGTTTCCC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * *
33022534 TCTTGGTTTTTTGATAAACTTTCGAACCTT-TCAAATTTTTACGAGTTCTTTTATAACTTCGGTT
66 TCTTGGTTCTTGGATGAACTTTCGAA-CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
* * * * *
33022598 CCTTAAAGTATTCAAGATGATCAATTCCTTCCAGTAATTTTCCGTACATTCCATTCTCGGGAAAT
130 CCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAAT
*
33022663 CGCATCATTTGATCTAAAGAGT
195 CGCATCATTTGATCTAAATAGT
* * * *
33022685 GTGTCATTTTGTAAAGAAGTTTTGGTCTTTAAATTAAAAACTTATATACGTGAGAATTGTTTCCC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * *
33022750 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTTGGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * **
33022815 CTTAAAGTATTAAAGATGATCCATTCCTTCGAGCTATTTT-TCGAACATTCCATGCTCATGAAAT
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCT-GAACATTCCATGCTCGGGAAAT
* *
33022879 CGCAT-TTTTGATGTAAATAGT
195 CGCATCATTTGATCTAAATAGT
* * * * * * *
33022900 TTGTCGTTTTGTAAATAAGTTTTCGTTTTTGAATTAAAAACTGATTTACTTGAGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * *
33022965 TCTTGGTTTTTTGATAAACTTTCGAACCTGTCAAACTTTTACGAGTTCTTTTATAATTTCGGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * *
33023030 CTTAAAGTACTCAAGACGATCAATTCC-TCCAGCAATTTTCTGAACATTCCATGGTCGGGAAATT
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAATC
33023094 GCATCATTT-AGTCTAAATAGT
196 GCATCATTTGA-TCTAAATAGT
* * *
33023115 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATCAAACACTTATATATGTGAGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * * * * *
33023180 TCTTGGTTCTTGGAGGAACTTTTGAACTAGTCAAACTTCTATGAGTTATTTAATAGCTTCGGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * * * * * **
33023245 CTAAAATTATTTAGGACGATCCATTCCTTCCAGCAATTTT-TCGAACACTACATGCCCAAGAAAT
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCT-GAACATTCCATGCTCGGGAAAT
*
33023309 CGCATCATTTGGTCTAAATAGT
195 CGCATCATTTGATCTAAATAGT
* ** *
33023331 TTGTTATTTTGTAAACAAGTTTTATTCTTTGAATTAAAAACTTATATACGTGAGAATTATTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* *** * *
33023396 TCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTGTAACTTCTTTTATAACTTCGATTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
** * *
33023461 CTTAAAACATTCAAGATGATCCATTCCTTCTAGCAATTTTTTGAACATTCCATGCTCGGGAAATA
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAAT-
* * ** * * *
33023526 AAGTATTCAAGATGATC-CATTACT
195 -CGCA-TC-ATTTGATCTAAATAGT
* ** * * ** * *
33023550 TCCAG-CAATTTTCCAAAC-A-TTTAAATCGCATCATTTG-GTCTAAAGAGTTTGTCATTTTC-T
1 T--TGTC-ATTTTGTAAACAAGTTT---T-G-GTC-TTTGAAT-TAAA-A-ACT-T-ATATACGT
* * ** ** ** * ** * *
33023610 AAACAAATT-TTAGTCT-TT-G-AATT--AAAAACTTAT--ATACGTGAGAATTATTTCTCTCTC
52 -GA-GAATTGTTTCTCTCTTGGTTCTTGGATGAACTT-TCGA-ACTTGTCAA--ACTT-T-T-AC
** * * ** * * * * * ** ** * *
33023667 G-GTTCTTGGACGAGCTTTC-GAACTTGTCAAGCTTTTACGAGTTCTTTTTTAACTTCGGTTCCT
108 GAGTTCTTTTA-TAAC-TTCGGTTCCT-TAAAG-TATT-CAAG---ATGATCCA-TTC-CTTCCA
* * * * * * * * *
33023730 GAAAGTATTCATG-ACGA-TCCAGTCCTTTGAGCAATTTTTCG-AACATTCCATGCTCGGGAAAT
163 GCAA-TTTTC-TGAAC-ATTCCA-TGC-TCG-GGAA---ATCGCATCATT---TGATC--TAAAT
33023792 CGCATCATTTGTCTAAAGAGT
214 ------------------AGT
* * * * *
33023813 TTGTCATTTTCTAAACAAATTTTAGTCTTTGAATTAAAAACTTATATACGTGAAAATTGTTTTTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * *
33023878 TCTTGGTTTTTGGATGAAC-TTCAGAGCTTCTCAAACTTTTACGAGTACTTTTATAACTTAGGTT
66 TCTTGGTTCTTGGATGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
* * *
33023942 CCTTAAAGTATTCAATATGACCCATTCCTTCCAGCAATTTTCT-AA-A---CAT--T---TAAAT
130 CCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAAT
*
33023997 CGCATCATTTGGTCTAAATAGT
195 CGCATCATTTGATCTAAATAGT
*
33024019 TTGTCATTTTGTAAACAAGTTTTGCTCTTTGAATTAAAAACTTAT-TCACGTGAGAATTGTTTCT
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATAT-ACGTGAGAATTG-TT-T
* * * * * **
33024083 CTCTCTTAGTTCTTTGACGAACTTCCGAACTTGTCAAACCTTTATAAGTTCTTTTATAACTTCGG
63 CTCTCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGG
* * *** * *
33024148 TTCCTCACAGTATTTGTGATGATCCATTCCTTCAAGCAATTTT-TCAAACATTCCATGCTCGGGA
128 TTCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCT-GAACATTCCATGCTCGGGA
* * *
33024212 TATCGCATCA-TTGGTTTAAATAGT
192 AATCGCATCATTTGATCTAAATAGT
* * * *
33024236 TTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAATTTATATATGTGAGAATTCTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * *
33024301 TCTTGGTCCTTGGACGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTCAGTTC
66 TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
** * * * *
33024366 CTTAAAACATTCAAGATGATCCATTCCTTCCTGTAATTTTCCGAACATTCCATGCTCGGGATATC
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAATC
* *
33024431 GCATCATTTGGTCTACATAGT
196 GCATCATTTGATCTAAATAGT
* *
33024452 TTG-CTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATATGTGATAATTGTTTCT
1 TTGTC-ATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCT
* * * * * *
33024516 CGCTTGGTTCATGGACGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTACAACTTTGGTT
65 CTCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
* * * *
33024581 CCTTAAAGTATTCAAGATGATCCATTCCTTCCAACAATTTT-TCGAACATTCCATTCTTGCGAAA
130 CCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCT-GAACATTCCATGCTCGGGAAA
* *
33024645 TCGCATCATTTGGTTTAAATAGT
194 TCGCATCATTTGATCTAAATAGT
* * * *
33024668 TTGACAATTTATAAACAAGTTTAT-GTCTTTGAATTAAAAACTTACATACGTGAGAATTGTTTC-
1 TTGTCATTTTGTAAACAAGTTT-TGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCT
* * * * * * * * * *
33024731 CATCATGATTCCTGCACGAACTTCCGAACTTGTCAAATTTTTACAAGTTCTTTTATAACTTTGGC
65 C-TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGT
* * * *
33024796 TCCTTAAAGTATTCAAGACGATCCATTCCTTTCAGTAAGTTTCCT-AACATTCCATGC
129 TCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAA-TTTTCTGAACATTCCATGC
33024853 GATCTTGTCC
Statistics
Matches: 4734, Mismatches: 1046, Indels: 657
0.74 0.16 0.10
Matches are distributed among these distances:
205 1 0.00
206 55 0.01
207 3 0.00
208 85 0.02
209 4 0.00
210 5 0.00
211 4 0.00
212 48 0.01
213 166 0.04
214 388 0.08
215 1265 0.27
216 1971 0.42
217 86 0.02
218 16 0.00
219 13 0.00
220 6 0.00
221 10 0.00
222 21 0.00
223 10 0.00
224 31 0.01
225 22 0.00
226 25 0.01
227 14 0.00
228 29 0.01
229 31 0.01
230 17 0.00
231 13 0.00
232 10 0.00
233 10 0.00
234 10 0.00
235 8 0.00
236 5 0.00
237 15 0.00
238 28 0.01
239 28 0.01
240 25 0.01
241 11 0.00
242 15 0.00
243 5 0.00
244 11 0.00
245 20 0.00
246 11 0.00
247 4 0.00
248 2 0.00
249 1 0.00
250 12 0.00
251 18 0.00
252 21 0.00
253 34 0.01
254 17 0.00
255 6 0.00
256 18 0.00
257 14 0.00
258 12 0.00
259 4 0.00
260 1 0.00
261 11 0.00
262 2 0.00
263 6 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (216 bp):
TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
TCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGGAAATC
GCATCATTTGATCTAAATAGT
Found at i:33019718 original size:431 final size:430
Alignment explanation
Indices: 33018530--33024852 Score: 3319
Period size: 431 Copynumber: 14.4 Consensus size: 430
33018520 TCCATAAAAG
* * ** * * *
33018530 TTGTCGTTTTGTAAACAAATTTTGGTGGTTCAATTAAAAACTTATATACGCGAGAATTATTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * ** *
33018595 TCTTTGTTCTT-GACGAGCTTTTGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTC
66 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * *
33018659 CTGT-AAGTATTCAAGACGATCCATTCCTTACAGCAATTTCT-AAACATTCCATGCTCCGGAAAT
131 CT-TAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAAAT
* * * * *
33018722 CGCACCATTTGATCT-AATACTCTGTCATTTTGTAAACAAGTTTTGGTCTCTAAATTAAAAACTT
195 CGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTT
* * * * * *
33018786 ATATATGTGAGAATTGTTTCTCTCTTGATTCTTGGATGAACTTTGGAACTAGTCAAACTTCTACG
260 ATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTCGAACTAGTCAAACTTTTACG
* * * *
33018851 AGTTCTTTTATAGCTTCGGTTCCTTAAATTATTCAAGATGATCCATTCCTTCCAGTAA-TTTTCT
325 AGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGA-CATCCATTCCTT-CAGCAATTTTTC-
* *
33018915 GAACATTACATGCTCAAGAAATCGCATCATTTGGTCTAAATAGT
387 GAACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* * ** * *
33018959 TTGTGATTTTGTAAACAAGTTTTGGTCATCAAATTAAAAACTTATATACCTGTGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* *
33019024 TCTTGGTTCTT-GATCGAACTTTTC-AACTTGTC-AACTTTTACGAGTGT-TTTTATAACTTCGG
66 TCTTGGTTCTTGGA-AGAAC-TTCCGAACTTGTCAAACTTTTACGAGT-TCTTTTATAACTTCGG
** * * * * *
33019085 TTCCTTAAAACATTCAAGACGATGCATTCCTTCCAGCAGTTTATCGAGCATTCCATGCTCAGGAA
128 TTCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAA
* * * *
33019150 ATCGCGTCATTTGGTTTAAA-AGTTTGTCATTTTGTAAACACA-TTTTGGTCATTGAATTAAAAA
193 ATCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACA-AGTTTTGGTCTTTGAATTAAAAA
* * * * *
33019213 CTTATATACGCGAGAATTATTTCTCTCTTTGTTCTTGGACG-AGCTTCTGAACTTGTCAAACTTT
257 CTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTC-GAACTAGTCAAACTTT
* * *
33019277 TACAAGTTCTTTTATAACTTCGGTTTCCTTAAAGTATTCAAGACATTCATTCCTTACAGTAATTT
321 TACGAGTTCTTTTATAACTTCGG-TTCCTTAAAGTATTCAAGACATCCATTCCTT-CAGCAATTT
* * * *
33019342 TTCGTACATTCCATGCTCAAGAAATCGCATAATTTGATCTCAATAAT
384 TTCGAACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* * * * *
33019389 TTGTCAATTTGTAAAGATGTTTTGGTCTTTGAATTAAAAACTTATAAACGTGAGAATTGTTTCCC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * *
33019454 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAAATTTTATGAGTTCTTTTATAACTTTGGTTC
66 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * *
33019519 CTTAAAGTATTAAAGATGATCCATTCCTTCGATCTATTTTTCGAACATTCCATGCTCATGAAATC
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAAATC
* * * * * *
33019584 GCAT-TTTTGATCTAAATAGTTTGTCATTTTGTAAACTAGTTTTGGCCTTTGAACTAAAATCCTA
196 GCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTA
* * * * * *
33019648 TTTACGGGAGAATTATTTCTCTCCTGGTTCTTGGACGAACCTTCGAACTAGTAAAAGTTTTACGA
261 TATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTCGAACTAGTCAAACTTTTACGA
* *
33019713 GTTCTTTTATTACTTCGGTT-CTTACAGTATTCAAGACGATCCATTCCTTCGAGCAA-TTTTCTG
326 GTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAC-ATCCATTCCTTC-AGCAATTTTTC-G
* * *** * *
33019776 GACATTCCAAGCTTGGGAAATTGCATCATTTGATATAAATAGT
388 AACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
** * * * * *
33019819 TTGTCATTTTGTAAACAAGTTTTCATTTTTGAATTAAAAACTGATTTCCATGAGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * *
33019884 TCTTGGTT-TTTGATA-AACTTCCGAACCTGTCAAACTTCTACTAGTTCTTTTATAACTTCGGTT
66 TCTTGGTTCTTGGA-AGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
*
33019947 CCTTAAAGTATTCAAGACGA-CCAATTCCTTCCAGCAATTTTTCGAACATTCCATGCTC-GAGAA
130 CCTTAAAGTATTCAAGATGATCC-ATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAG-GAA
* * * * *
33020010 ATCGCATCATTTGGTCCAAACAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATCAAACAC
193 ATCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAAC
* * **
33020075 TTATATATGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTAGTCAAACTTCCA
258 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTCGAACTAGTCAAACTTTTA
* * * *
33020140 CGAGTTCTTTTATACCTTCGGTTCCTTAAATTATTCAAGACGATCCATTCCTTCCAGCGATTTTC
323 CGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAC-ATCCATTCCTT-CAGCAATTTTT
* *
33020205 CGAACATTACATGCTCAAGAAATCGCATCATTTGGTCTAAATAGT
386 CGAACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* * * * * *
33020250 TTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACGTATATACCTAATAATTGATTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * * * *
33020315 TCTTGGTTCTTCGATGAACTTCCGAAGTTGTCAAACTTTTACTAGTTCTTTTGTAACATCAGTTC
66 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * ** * * * *
33020380 CTCAGAGTAGTCGTGATGATCCATTCCTTCAAGCAATTTTCCGAACATAT-CATGCTCGGGATAT
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACAT-TCCATGCTCAGGAAAT
* * * * * *
33020444 CGTATCATTTGGTCTAAATAGTTTATTATTTTGTAAACAAGTTCTT-GTCATCGAATTAAAAACT
195 CGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTT-TTGGTCTTTGAATTAAAAACT
* * * *
33020508 TATATACGTGAGAATTGTTTCTCTCTTGGTTCTT-GATCAAACTTTTGAACTTGTCAAACTTTTA
259 TATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGA-CGAACCTTCGAACTAGTCAAACTTTTA
* ** *
33020572 TGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAGTTTTA
323 CGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAC-ATCCATTCCTT-CAGCAATTTT-
* ** *** * ** * * *
33020637 ACG-AGTTTTTTTGTTACTTCG-ATTC-C-TCA---GAT-T-ATTCGT
385 TCGAACATTCCATGCT-C-AAGAAATCGCATCATTTGATCTAAATAGT
* * * * ** * ** *
33020676 GATGATCCATTCCTTCAAGTAAAATTCCGAACATATCAT-GCCTGGGATATCTCATCA-TT-TGT
1 -TTG-T-CATT--TT---GT-AAA---C-AA-GT-T-TTGGTCTTTGA-AT-TAAAAACTTATAT
* * * * * ** * **
33020738 TC-T-A-AATAGTTTATCAT-TTTGTAAACAAGTT-TTAG-TCTT-CGAA-TT-AAAAACTTATA
48 ACGTGAGAATTGTTTCTC-TCTTGGT--TC---TTGGAAGAACTTCCGAACTTGTCAAACTT-T-
** * * * * ** *
33020794 TACGCGAGAATTCTTTT-TCTCTT-TGTT-CTTGGACGAGCT-TCCAAACATG-T-CA-AACTTT
105 TA--CGAG--TTCTTTTATAACTTCGGTTCCTT--A-AAG-TATTC-AAGATGATCCATTCCTTC
* ** ** * * *** * * **
33020852 TA-CAAGTTCTTTTATAAC-TTCGGTTC-CAGTAAGTAT-GCA--AGACGATC-CATTCCTTTCA
161 CAGCAA--T-TTTTCGAACATTCCATGCTCAGGAA--ATCGCATCATTTGATCTAAATAGTTT--
* * ** ** * *
33020910 G-CAATTTTTCGT--AC-A-TTCCATGCTC-GGGAAATCGCATAA-TT-TGAT-C-T-A-AATAG
219 GTC-A-TTTT-GTAAACAAGTT--TTGGTCTTTG-AAT-TAAAAACTTAT-ATACGTGAGAATTG
* * * * ** * ** * * *
33020963 TTTGTC-ATT--TT-GT-GAAGAAGTTTTGGTCTTTAATTAAAAGCTTATATACGTGAGAATTGT
276 TTTCTCTCTTGGTTCTTGGACGAACCTTCGAAC--T-AGTCAAA-CTT-T-TAC--GAG--TTCT
** * * * * * ** * * * **
33021023 TTCCCT--CTT-GGTT-CTTGGAAGAACTTC-CGAACTTGTCAAACTTTTA-CGAGTTCTTTTAT
331 TT-TATAACTTCGGTTCCTT-AAAGTA-TTCAAG-ACAT-CCATTCCTTCAGC-A-AT-TTTTCG
* *** * * * * * *
33021082 AACTTTGGTTCCTTAAAGTATTAAAGATGACCCATTCCTTTAAGCT--AT--T
388 AACATTCCATGC-TCAAG-----AA-AT--CGCA-TCATTTGATCTAAATAGT
** ** * * ** * * * ** * ** * *
33021131 TT-TCAAACATTCCACGCACATGAAATCGCATTTTTG-ATCTAAATAGTTTGTCATTTTGTAAAC
1 TTGTC--ATTTTGTA--AACAAG-TTTTG-GTCTTTGAAT-TAAA-AACTTAT-A-TACGT-GAG
* * ** *** * * * * **** *
33021194 AAGT-TTTCGT-TTTTGAAT-TAAAAACTAATTTACATGAGAATTGTTTCTCTCTT--G-GTT-T
55 AATTGTTTC-TCTCTTGGTTCTTGGAA-GAACTT-C-CGA-ACTTGTCAAACTTTTACGAGTTCT
* ** * * * **
33021252 TTTGATAAACTTCAGAACCTGTCAAACT-TTCACGA-GTTCTTTTCTAACTT-CAGTTCCTTAAA
115 TTT-AT-AACTTCGGTTCCT-T-AAAGTATTCAAGATGATCCATTC---CTTCCAG---C---AA
* * * * * * *
33021314 GTATTCAAGACTATCAATTCC-TTC-CAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGCGT
167 TTTTTC--GA--A-C-ATTCCATGCTCAGGAA---ATCG--CA-T-CAT--T--TG--AT--C-T
* * *
33021377 CATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTTGTCTTTGAATCAAAAACTTATATA
210 -A-A--------ATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATA
* * * * *** *
33021442 CGTGAGAATTATTTCTCTCTTGGTTCTTGAATGAA-CTTCGGAACTTGTCAAACTTTGGTGACTT
265 CGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTC-GAACTAGTCAAACTTTTACGAGTT
* * * ** *
33021506 CTTTTATAAGTTTGATTCCTTAAAACATTCAAGATGATCCATTCCTTCTAG-ATATTTTTCGAAC
329 CTTTTATAACTTCGGTTCCTTAAAGTATTCAAGA-CATCCATTCCTTC-AGCA-ATTTTTCGAAC
* ** * *
33021570 ATTCCAAGCTCGGGAAATTGCATCATCT-AGTCTAAATAGT
391 ATTCCATGCTCAAGAAATCGCATCATTTGA-TCTAAATAGT
* *
33021610 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAAGTG-GTAATTGATTCT
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAG-AATTGTTTCT
* * * * * * * *
33021674 CTCTTGGTTCTTGGATGAACTTACGAACCTGTCAAACTTTTTCAAGTTCTTTTGTTACTTCAGTT
65 CTCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
* * * ** * ** * * *
33021739 CATCAGAGTATTCGTGATGATCCATTCCTTCAAGCAACATTCCGAACATAT-CATGCTCGGGATA
130 CCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACAT-TCCATGCTCAGGAAA
* * * *
33021803 TCGCATCATTGGGTC-AAATAGTTTGTTATTTTGTAAACAAG-TTTGGTCTTCGAATTAAAAACT
194 TCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACT
** * * * * *
33021866 TATATACCCGAGAATTATTTCTCTCTTTGTT-TTGGAAG-AGCTTCTAAAC-ATGTCAAACTTTT
259 TATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTC-GAACTA-GTCAAACTTTT
* * ** * *
33021928 ACGAGTGCTTTTATAACTTCGATTCAAGT-AAGCATTCAAGATGATCCATTCCTTTCAGCAATTT
322 ACGAGTTCTTTTATAACTTCGGTTC-CTTAAAGTATTCAAGA-CATCCATTCC-TTCAGCAATTT
* ** *
33021992 TT-GTACATTCCATGCTCGGGAAATCGCATCATTTGATCTGAATAGT
384 TTCGAACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* * *
33022038 TTGTCATTTTGTAAAGAAGTTTTGGTCTTTAAATTAAAAACTTATATACGTGAGAATTGTTTCCC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * *
33022103 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAAGTTTTACGAGTTCTTTTATATCTTTGGTTC
66 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * * *
33022168 CTTAAAGTATTAAAGATGATCCATTCCTTCGAGCTATTTTTCAAACATTCCATGCTCATGAAATC
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAAATC
* * * * *
33022233 GCAT-TTTTGATCTAAATAGTTTGTCGTTTTGTAAACTAGTTTTGGTCTTTGAATTAAAATCCTA
196 GCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTA
* * * * * *
33022297 TTTACGTGAGAATTGTTTCTCTTTTTGGTTCTTGGACGAACTTTTGAACAAGT-AAGAGTTTTAC
261 TATACGTGAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACCTTCGAACTAGTCAA-ACTTTTAC
* ** * * *
33022361 GAGTTCTTTTATTACTTCAATTCCTTATAGTGTTCAAGATGATCCATTCCTTCGAGCAA-TTTTC
324 GAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGA-CATCCATTCCTTC-AGCAATTTTTC
* * *** * * * *
33022425 TAACATTCCAAGCTTGGGAAAACGCATCATGTGATATAATTAGT
387 GAACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* * * * * *
33022469 TTGTCATTTTGTAAACAAGTTTTCGTTTTTGAATTAAAAACTGATTTACATGAGAATTGTTTCCC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * *
33022534 TCTTGGTTTTTTGATA-AACTTTCGAACCTT-TCAAATTTTTACGAGTTCTTTTATAACTTCGGT
66 TCTTGGTTCTTGGA-AGAACTTCCGAA-CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGT
* * * * * *
33022597 TCCTTAAAGTATTCAAGATGATCAATTCCTTCCAGTAATTTTCCGTACATTCCATTCTCGGGAAA
129 TCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAAA
* * * *
33022662 TCGCATCATTTGATCTAAAGAGTGTGTCATTTTGTAAAGAAGTTTTGGTCTTTAAATTAAAAACT
194 TCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACT
* * *
33022727 TATATACGTGAGAATTGTTTCCCTCTTGGTTCTTGGAAGAA-CTTCCGAACTTGTCAAACTTTTA
259 TATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTT-CGAACTAGTCAAACTTTTA
* * * * *
33022791 TGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTAAAGATGATCCATTCCTTCGAGCTATTTTT
323 CGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGA-CATCCATTCCTTC-AGCAATTTTT
* * *
33022856 CGAACATTCCATGCTCATGAAATCGCAT-TTTTGATGTAAATAGT
386 CGAACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* * * * * * *
33022900 TTGTCGTTTTGTAAATAAGTTTTCGTTTTTGAATTAAAAACTGATTTACTTGAGAATTGTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * *
33022965 TCTTGGTTTTTTGATA-AACTTTCGAACCTGTCAAACTTTTACGAGTTCTTTTATAATTTCGGTT
66 TCTTGGTTCTTGGA-AGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTT
* * * * *
33023029 CCTTAAAGTACTCAAGACGATCAATTCC-TCCAGCAA-TTTTCTGAACATTCCATGGTCGGGAAA
130 CCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTC-GAACATTCCATGCTCAGGAAA
* * *
33023092 TTGCATCATTT-AGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATCAAACAC
194 TCGCATCATTTGA-TCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAAC
* * * * *
33023156 TTATATATGTGAGAATTGTTTCTCTCTTGGTTCTTGGAGGAACTTTTGAACTAGTCAAACTTCTA
258 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTCGAACTAGTCAAACTTTTA
* * * * * * * *
33023221 TGAGTTATTTAATAGCTTCGGTTCCTAAAATTATTTAGGACGATCCATTCCTTCCAGCAATTTTT
323 CGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAC-ATCCATTCCTT-CAGCAATTTTT
* * * *
33023286 CGAACACTACATGCCCAAGAAATCGCATCATTTGGTCTAAATAGT
386 CGAACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* ** *
33023331 TTGTTATTTTGTAAACAAGTTTTATTCTTTGAATTAAAAACTTATATACGTGAGAATTATTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* *** * *
33023396 TCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTGTAACTTCTTTTATAACTTCGATTC
66 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
** * * *
33023461 CTTAAAACATTCAAGATGATCCATTCCTTCTAGCAATTTTTTGAACATTCCATGCTCGGGAAATA
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAAAT-
* * ** * * * * ** *
33023526 AAGTATTCAAGATGATC-CATTACTTCCAG-CAATTTTCCAAAC-A-TTTAAATCGCATCATTTG
195 -CGCA-TC-ATTTGATCTAAATAGTT--TGTC-ATTTTGTAAACAAGTTT---T-G-GTC-TTTG
* ** * * * * ** ** * * **
33023587 -GTCTAAAGAGTTTGTCATTTTC-TAAACAAATT-TTAGTCT-TT-G-AATT--A-AAAACTTAT
248 AAT-TAAA-A-ACT-T-ATATACGT-GA-GAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTCG
* * ** * * ** * * *
33023643 ATACGTGAG--AATTATTTCTCTCTCG-GTTCTTGGACGAGCTTTC-GAACTTGTCAAGCTTTTA
306 A-AC-T-AGTCAA--ACTT-T-T-ACGAGTTCTTTTA-TAAC-TTCGGTTCCT-TAAAG-TATT-
* * * ** * * * * * * **
33023704 CGAGTTCTTTTTTAACTTCGGTTCCTGAAAGTATTC-ATGACGA-TCCAGTCCTTTGAGCAATTT
358 CAAG-AC---ATCCA-TTC-CTT-CAGCAATTTTTCGA--AC-ATTCCA-TGC-TCAAG-AA---
* * * * **
33023767 TTCGAACATTCCATGCTCGGGAAATCGCATCATTTGTCTAAAGAGT
407 ATCG--CA-T-CAT--T--TG--ATC-TA-AATAG----------T
* * * * *
33023813 TTGTCATTTTCTAAACAAATTTTAGTCTTTGAATTAAAAACTTATATACGTGAAAATTGTTTTTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * * * *
33023878 TCTTGGTTTTTGGATGAACTTCAGAGCTTCTCAAACTTTTACGAGTACTTTTATAACTTAGGTTC
66 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
* * * *
33023943 CTTAAAGTATTCAATATGACCCATTCCTTCCAGCAA-TTTTCTAA-A---CAT--T---TAAATC
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAAATC
* *
33023998 GCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGCTCTTTGAATTAAAAACTTA
196 GCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTA
* * * *
33024063 T-TCACGTGAGAATTGTTTCTCTCTCTTAGTTCTTTGACGAA-CTTCCGAACTTGTCAAACCTTT
261 TAT-ACGTGAGAATTG-TT-TCTCTCTTGGTTCTTGGACGAACCTT-CGAACTAGTCAAACTTTT
** * * *** *
33024126 ATAAGTTCTTTTATAACTTCGGTTCCTCACAGTATTTGTGATGATCCATTCCTTCAAGCAATTTT
322 ACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGA-CATCCATTCCTTC-AGCAATTTT
* ** * * *
33024191 TCAAACATTCCATGCTCGGGATATCGCATCA-TTGGTTTAAATAGT
385 TCGAACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* * * *
33024236 TTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAATTTATATATGTGAGAATTCTTTCTC
1 TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
* * * * *
33024301 TCTTGGTCCTTGGACGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATAACTTCAGTTC
66 TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
** * * * * *
33024366 CTTAAAACATTCAAGATGATCCATTCCTTCCTGTAATTTTCCGAACATTCCATGCTCGGGATATC
131 CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAAATC
* *
33024431 GCATCATTTGGTCTACATAGTTTG-CTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTT
196 GCATCATTTGATCTAAATAGTTTGTC-ATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTT
* * * * * * *
33024495 ATATATGTGATAATTGTTTCTCGCTTGGTTCATGGACGAACTTTCGAACTTGTCAAACTTTTATG
260 ATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTCGAACTAGTCAAACTTTTACG
* * * *
33024560 AGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCCAACAATTTTTCG
325 AGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGA-CATCCATTCCTT-CAGCAATTTTTCG
* *** * *
33024625 AACATTCCATTCTTGCGAAATCGCATCATTTGGTTTAAATAGT
388 AACATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
* * * *
33024668 TTGACAATTTATAAACAAGTTTAT-GTCTTTGAATTAAAAACTTACATACGTGAGAATTGTTTC-
1 TTGTCATTTTGTAAACAAGTTT-TGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCT
* * * * * * * * *
33024731 CATCATGATTCCTGCACGAACTTCCGAACTTGTCAAATTTTTACAAGTTCTTTTATAACTTTGGC
65 C-TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGT
* * * * * *
33024796 TCCTTAAAGTATTCAAGACGATCCATTCCTTTCAGTAAGTTTCCTAACATTCCATGC
129 TCCTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGC
33024853 GATCTTGTCC
Statistics
Matches: 4471, Mismatches: 1025, Indels: 793
0.71 0.16 0.13
Matches are distributed among these distances:
423 141 0.03
424 6 0.00
425 1 0.00
426 4 0.00
427 9 0.00
428 234 0.05
429 381 0.09
430 809 0.18
431 1142 0.26
432 585 0.13
433 103 0.02
434 10 0.00
435 17 0.00
436 10 0.00
437 17 0.00
438 30 0.01
439 17 0.00
440 30 0.01
441 49 0.01
442 55 0.01
443 47 0.01
444 41 0.01
445 30 0.01
446 19 0.00
447 12 0.00
448 9 0.00
449 9 0.00
450 6 0.00
451 23 0.01
452 19 0.00
453 26 0.01
454 18 0.00
455 8 0.00
456 6 0.00
457 10 0.00
458 13 0.00
459 8 0.00
460 22 0.00
461 14 0.00
462 18 0.00
463 11 0.00
464 13 0.00
465 3 0.00
466 10 0.00
467 16 0.00
468 22 0.00
469 17 0.00
470 23 0.01
471 20 0.00
472 14 0.00
473 4 0.00
474 12 0.00
475 11 0.00
476 7 0.00
477 5 0.00
478 6 0.00
479 5 0.00
480 3 0.00
481 6 0.00
482 144 0.03
484 5 0.00
485 22 0.00
486 27 0.01
487 16 0.00
488 10 0.00
489 1 0.00
490 9 0.00
491 5 0.00
492 4 0.00
493 3 0.00
494 3 0.00
495 6 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (430 bp):
TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC
TCTTGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTC
CTTAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAGGAAATC
GCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTA
TATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACCTTCGAACTAGTCAAACTTTTACGA
GTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACATCCATTCCTTCAGCAATTTTTCGAAC
ATTCCATGCTCAAGAAATCGCATCATTTGATCTAAATAGT
Found at i:33022930 original size:20 final size:19
Alignment explanation
Indices: 33022890--33022928 Score: 62
Period size: 19 Copynumber: 2.1 Consensus size: 19
33022880 GCATTTTTGA
33022890 TGTAAATAGTTTGTCGTTT
1 TGTAAATAGTTTGTCGTTT
33022909 TGTAAATAAGTTT-TCGTTT
1 TGTAAAT-AGTTTGTCGTTT
33022928 T
1 T
33022929 TGAATTAAAA
Statistics
Matches: 19, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
19 14 0.74
20 5 0.26
ACGTcount: A:0.23, C:0.05, G:0.18, T:0.54
Consensus pattern (19 bp):
TGTAAATAGTTTGTCGTTT
Found at i:33024368 original size:423 final size:420
Alignment explanation
Indices: 33023524--33024846 Score: 1622
Period size: 423 Copynumber: 3.1 Consensus size: 420
33023514 GCTCGGGAAA
*
33023524 TAAAGTATTCAAGATGATCCATTACTTCCAGCAATTTTCCAAACATTTAAATCGCATCATTTGGT
1 TAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCCAAACATTTAAATCGCATCATTTGGT
* * *
33023589 CTAAAGAGTTTGTCATTTTCTAAACAAATTTTAGTCTTTGAATTAAAAACTTATATACGTGAGAA
66 CTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTCTTTGAATTAAAAACTTATATACGTGAGAA
* * * * *
33023654 TTATTTCTCTCTC--GGTTCTTGGACGAGCTTTCGAACTTGTCAAGCTTTTACGAGTTCTTTTTT
130 TTGTTTCTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTAT
* * * **
33023717 AACTTCGGTTCCTGAAAGTATTCATGACGATCCAGTCCTTTGAGCAATTTTTCGAACATTCCATG
195 AACTTCGGTTCCTCAAAGTATTCATGATGATCCATTCCTTCAAGCAATTTTTCGAACATTCCATG
* * * * *
33023782 CTCGGGAAATCGCATCATTTGTCTAAAGAGTTTGTCATTTTCTAAACAAATTTTAGTCTTTGAAT
260 CTCGGGAAATCGCATCATTGGTTTAAATAGTTTGTCATTTTATAAACAAGTTTT-GTCTTTGAAT
* * ** * * *
33023847 TAAAAACTTATATACGTGAAAATTGTTTTTCTCTTGGTTTTTGGATGAAC-TTCAGAGCTTCTCA
324 TAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTCCTTGGACGAACTTTC-GAACTTGTCA
*
33023911 AACTTTTACGAGTACTTTTATAACTTAGGTTCCT
388 AACTTTTACGAGTTCTTTTATAACTTA-GTTCCT
* * *
33023945 TAAAGTATTCAATATGACCCATTCCTTCCAGCAATTTTCTAAACATTTAAATCGCATCATTTGGT
1 TAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCCAAACATTTAAATCGCATCATTTGGT
33024010 CTAAATAGTTTGTCATTTTGTAAACAAGTTTTGCTCTTTGAATTAAAAACTTAT-TCACGTGAGA
66 CTAAATAGTTTGTCATTTTGTAAACAAGTTTTG-TCTTTGAATTAAAAACTTATAT-ACGTGAGA
* * * * *
33024074 ATTGTTTCTCTCTCTTAGTTCTTTGACGAACTTCCGAACTTGTCAAACCTTTATAAGTTCTTTTA
129 ATTGTTTCTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTA
* ** *
33024139 TAACTTCGGTTCCTCACAGTATTTGTGATGATCCATTCCTTCAAGCAATTTTTCAAACATTCCAT
194 TAACTTCGGTTCCTCAAAGTATTCATGATGATCCATTCCTTCAAGCAATTTTTCGAACATTCCAT
* * *
33024204 GCTCGGGATATCGCATCATTGGTTTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAA
259 GCTCGGGAAATCGCATCATTGGTTTAAATAGTTTGTCATTTTATAAACAAGTTTT-GTCTTTGAA
* * *
33024269 TTAAAAATTTATATATGTGAGAATTCTTTCTCTCTTGGTCCTTGGACGAACTTTCGAACTTGTCA
323 TTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTCCTTGGACGAACTTTCGAACTTGTCA
*
33024334 AACTTTTATGAGTTCTTTTATAACTTCAGTTCCT
388 AACTTTTACGAGTTCTTTTATAACTT-AGTTCCT
** * * * *
33024368 TAAAACATTCAAGATGATCCATTCCTTCCTGTAATTTTCCGAACATTCCATGCTCGGGATATCGC
1 TAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCC-AA-A---CAT--T---TAAATCGC
*
33024433 ATCATTTGGTCTACATAGTTTG-CTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTAT
56 ATCATTTGGTCTAAATAGTTTGTC-ATTTTGTAAACAAGTTTT-GTCTTTGAATTAAAAACTTAT
* * * *
33024497 ATATGTGATAATTG-TT-TCTCGCTTGGTTCATGGACGAACTTTCGAACTTGTCAAACTTTTATG
119 ATACGTGAGAATTGTTTCTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTATG
* * * *
33024560 AGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCCAA-CAATTTTTC
184 AGTTCTTTTATAACTTCGGTTCCTCAAAGTATTCATGATGATCCATTCCTT-CAAGCAATTTTTC
* * * * *
33024624 GAACATTCCATTCTTGCGAAATCGCATCATTTGGTTTAAATAGTTTGACAATTTATAAACAAGTT
248 GAACATTCCATGCTCGGGAAATCGCATCA-TTGGTTTAAATAGTTTGTCATTTTATAAACAAGTT
* * * *
33024689 TATGTCTTTGAATTAAAAACTTACATACGTGAGAATTGTTTC-CATCATGATTCC-TGCACGAAC
312 T-TGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC-TCTTG-GTCCTTGGACGAAC
* * * * *
33024752 TTCCGAACTTGTCAAATTTTTACAAGTTCTTTTATAACTTTGGCTCCT
374 TTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAAC-TTAGTTCCT
* * * * *
33024800 TAAAGTATTCAAGACGATCCATTCCTTTCAGTAAGTTTCCTAACATT
1 TAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCCAAACATT
33024847 CCATGCGATC
Statistics
Matches: 776, Mismatches: 101, Indels: 46
0.84 0.11 0.05
Matches are distributed among these distances:
420 2 0.00
421 131 0.17
423 267 0.34
424 6 0.01
425 2 0.00
427 3 0.00
428 3 0.00
430 2 0.00
431 119 0.15
432 158 0.20
433 81 0.10
434 2 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (420 bp):
TAAAGTATTCAAGATGATCCATTCCTTCCAGCAATTTTCCAAACATTTAAATCGCATCATTTGGT
CTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTCTTTGAATTAAAAACTTATATACGTGAGAAT
TGTTTCTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTTTATA
ACTTCGGTTCCTCAAAGTATTCATGATGATCCATTCCTTCAAGCAATTTTTCGAACATTCCATGC
TCGGGAAATCGCATCATTGGTTTAAATAGTTTGTCATTTTATAAACAAGTTTTGTCTTTGAATTA
AAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTCCTTGGACGAACTTTCGAACTTGTCAAAC
TTTTACGAGTTCTTTTATAACTTAGTTCCT
Found at i:33027100 original size:16 final size:15
Alignment explanation
Indices: 33027066--33027100 Score: 70
Period size: 15 Copynumber: 2.3 Consensus size: 15
33027056 TTTTTTTTCG
33027066 AAAAATTTACTGGGT
1 AAAAATTTACTGGGT
33027081 AAAAATTTACTGGGT
1 AAAAATTTACTGGGT
33027096 AAAAA
1 AAAAA
33027101 CTGCTAGTTG
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 20 1.00
ACGTcount: A:0.49, C:0.06, G:0.17, T:0.29
Consensus pattern (15 bp):
AAAAATTTACTGGGT
Found at i:33031508 original size:215 final size:216
Alignment explanation
Indices: 33030891--33033143 Score: 2728
Period size: 216 Copynumber: 10.5 Consensus size: 216
33030881 TCTTCTCTCG
* * * * *
33030891 TGAATTACAAACTTATTTACGTGAGAATAGTTTCTCTCTTGGTACTGGGACGAACTT-TCGAACT
1 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCT-GAACT
* * ** *
33030955 TGTCAAACTTTTATGAGTTCTTTTATAACCTCGGTTCCTTAAAACATTCAAGACGTTCCATTCCT
65 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCT
* ** *
33031020 TCCAACAATTTTTCGAACATTCCATGCTCAAGAAATCACATCATTTGGTCTAAATAGTTTGTCAT
130 TCCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCAT
*
33031085 TTTGTAAACAAGTTTTAGTCTT
195 TTTGTAAACAAGTTTTGGTCTT
* * *
33031107 TGAATTAAAAACATATATACGTGAGAATTGTTTCTATCTTGGTTCTTGGACGAACTTCCGAACTT
1 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
* * * * * **
33031172 GTCAGACTTTTACGTGTTCTTTTATAACTTCTGTTCTTTAAAGTATTAAAGATAATCCATTCCTT
66 GTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * * * * * * *
33031237 CAAGCAATATTTCGAACAGTCCATGCTCGCGAAATCTCATCTTTTGGTCT-AATAGTTTATTATT
131 CCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
33031301 TTGTAAACAAGTTTTGGTCTT
196 TTGTAAACAAGTTTTGGTCTT
* * * * * * * *
33031322 TAAATTAAAATCCTATTTAGGTGAGAATTATTTCTCTCTTGGTTCTAGGATGAACTT-TCGAA-T
1 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCT-GAACT
* * * ** * *
33031385 AGTCAAACTTCTACGAGTTCTTTTATAGCTTCAATTCCTTAAAGTATTCAAGACAATCCATTCTT
65 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCT
* * * * *
33031450 TCCAGTAATTTTTCGAACATTCCATGCTCGAGAAAT-GACTTCATTGGGTCTCAATAGTTTGTCA
130 TCCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCG-CATCATTTGGTCTAAATAGTTTGTCA
*
33031514 TTTTGTAAACAAGTTTTGTTCTT
194 TTTTGTAAACAAGTTTTGGTCTT
* * * *
33031537 TGAATTAAAAACCTATATAAC-CGAGAATTGTTTCTCTCTTGGTTCTTGGTCGAAGTTCTGAACT
1 TGAATTAAAAACTTATAT-ACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACT
* ** **
33031601 TGTCAAACTTTTACGAATTCTTTTATAACTTCAATTCCTTAAAACATTCAAGAC-ACTCCATTCC
65 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGA-TCCATTCC
* * * *
33031665 TTCTAGCCATTTTTCGAAAATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCA
129 TTCCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCA
33031730 TTTTGTAAACAAGTTTTGGTCTT
194 TTTTGTAAACAAGTTTTGGTCTT
* * * * *
33031753 TGAAATTAAAAACTTATATATGTGACAATCGTTTCTCTGTTGGTTCTTGGATGAACTTCTGAACT
1 TG-AATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACT
* * *** * *
33031818 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTCATAGTATTTGTGATGTTCCATTCCT
65 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCT
* * * * *
33031883 TCAAGCAATTTTTCGAACATTCCATGCTCCGGATATTGAATCATTTGGTCTAAATAGTTTG----
130 TCCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCAT
33031944 --T-TAAACAAGTTTTGGTCTT
195 TTTGTAAACAAGTTTTGGTCTT
* * **
33031963 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGATTCTTGGACAAACTTCCAAACTT
1 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
* **
33032028 GTCAAACTTTTACGACTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTT
66 GTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * * * *
33032093 CCAACAATTTTTTGAACATTTCATGCTCGGGAAATCGCATCATTTAGTCTAAAGAGTTTGTCATT
131 CCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
*
33032158 TTGTAAACAAATTTTGGTCTT
196 TTGTAAACAAGTTTTGGTCTT
* * *
33032179 TGAATTAAAAACTTATATACGTGAGAATTATTTCTCTCTTGGTTCTTGGACGAGCTTCTAAACTT
1 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
* * * * * * *
33032244 GTCAAGCTTTTAC-ATGTTCTTTT-TAACATCAGTTCCTGAACGTATTTAAGACGATACATTCCT
66 GTCAAACTTTTACGA-GTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCT
** * * * *
33032307 TTGAGCAATTTTTCAAACATTTCATGCTCGGGATATCGCATCATTTGGTCTAAATGGTTTGTCAT
130 TCCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCAT
*
33032372 TTTGTAAACAGGTTTTGGTCTT
195 TTTGTAAACAAGTTTTGGTCTT
* * * * * *
33032394 TAAATTAAAAACTTATTTGCGTGAGAATTGTTTCTCTCTTGGTTCTTAGACGAACCTCTAAACTT
1 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
* * * *
33032459 GTCAAACTTTTTCAAGTACTTTTATAACTTC-GTTCCTTAAAGTATTCAAGATGATCCATTCCTT
66 GTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * ** * * * * *
33032523 CCAGCATTTTTTCGAACATTTCACACTTGAGAAATTGCATCATTTGTTCTAAATAGTTTTTCATT
131 CCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
33032588 TTGTAAACAAGTTTTGGT-TT
196 TTGTAAACAAGTTTTGGTCTT
* * * * * *
33032608 GTGAATTAAAAACTTATTTACATGAGAATTATTTGTCTCTTGATTCTTGTACGAACTTCTGAACT
1 -TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACT
* * * * *
33032673 TGTCAAACTTTTACAAGTTGTTTAATAACTTCGATTCCTTATAGTATTCAAGACGATCCATTCCT
65 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCT
* * * *
33032738 TCCAACAATGTTCCAAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCAT
130 TCCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCAT
*
33032803 TTTGTAAACAA-TGTTTAGTCTT
195 TTTGTAAACAAGT-TTTGGTCTT
* * * * *
33032825 TGAATTAAAAATTTATATACGTGACAAATGTTTCTGTCTAGGTTCTTGGACGAACTTCTGAACTT
1 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
* ** ** ** * * *
33032890 GTCAAACTTTTATGAACTCTTTTATAACTTCGGTTTTTTAAAACATTCAAAAAGATCAATTCCTT
66 GTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * *
33032955 CCAACAATTTTTCGAACATTCCATGCTTGGGATATCGCATCATTTGGTCTAAATAGTTTGTCATT
131 CCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
33033020 TTGTAAACAAGTTTTGGTCTTT
196 TTGTAAACAAGTTTTGGTC-TT
* * **
33033042 TGAATT-AAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCAAACTT
1 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
*
33033106 GTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCT
66 GTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCT
33033144 GATGCGAGCT
Statistics
Matches: 1725, Mismatches: 284, Indels: 56
0.84 0.14 0.03
Matches are distributed among these distances:
209 159 0.09
210 20 0.01
211 1 0.00
214 98 0.06
215 530 0.31
216 749 0.43
217 168 0.10
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (216 bp):
TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
GTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTT
CCAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
TTGTAAACAAGTTTTGGTCTT
Found at i:33032739 original size:646 final size:645
Alignment explanation
Indices: 33030891--33033143 Score: 2802
Period size: 646 Copynumber: 3.5 Consensus size: 645
33030881 TCTTCTCTCG
* * * *
33030891 TGAATTACAAACTTATTTACGTGAGAA-TAGTTTCTCTCTTGGTACTGGGACGAACTT-TCGAAC
1 TGAATTAAAAACTTATATACGTGAGAATTA-TTTCTCTCTTGGTTCTTGGACGAACTTCT-GAAC
* * * *
33030954 TTGTCAAACTTTTATGAGTTCTTTTATAACCTCGGTTCCTTAAAACATTCAAGACGTTCCATTCC
64 TTGTCAAACTTTTA-CAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCC
* ** *
33031019 TTCCAACAATTTTTCGAACATTCCATGCTCAAGAAATCACATCATTTGGTCTAAATAGTTTGTCA
128 TTCCAACAATTTTTCAAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCA
* * * *
33031084 TTTTGTAAACAAGTTTTAGTCTTTGAATTAAAAACATATATACGTGAGAATTGTTTCTATCTTGG
193 TTTTGTAAACAAGTTTTGGTCTTTAAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGG
* * ** * *
33031149 TTCTTGGACGAACTTCCGAACTTGTCAGACTTTTACGTGTTCTTTTATAACTTCTGTTCTTTAAA
258 TTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAA
* * *
33031214 GTATTAAAGATAATCCATTCCTTCAAGCAATATTTCGAACAGTCCATGCTCGCGAAATCT-CATC
323 GTATTAAAGATGATCCATTCCTTCAAGCAATTTTTCGAACATTCCATGCTCG-GAAAT-TGCATC
* * * * *
33031278 TTTTGGTCT-AATAGTTTATTATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAATCCTATTTAG
386 ATTTGGTCTAAATAGTTT-TTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATTTAC
* * * * *
33031342 GTGAGAATTATTTCTCTCTTGGTTCTAGGATGAACTT-TCGAA-TAGTCAAACTTCTACGAGTTC
450 GTGAGAATTATTTCTCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACGAGTTC
* * * * **
33031405 TTTTATAGCTTCAATTCCTTAAAGTATTCAAGACAATCCATTCTTTCCAGTAATTTTTCGAACAT
514 TTTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAACAATTTTTCGAACAT
* * * * * *
33031470 TCCATGCTCGAGAAAT-GACTTCATTGGGTCTCAATAGTTTGTCATTTTGTAAACAAGTTTTGTT
579 TCCATGCTCGGGAAATCG-CATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAATTTTGGT
33031534 CTT
643 CTT
* * * * *
33031537 TGAATTAAAAACCTATATAAC-CGAGAATTGTTTCTCTCTTGGTTCTTGGTCGAAGTTCTGAACT
1 TGAATTAAAAACTTATAT-ACGTGAGAATTATTTCTCTCTTGGTTCTTGGACGAACTTCTGAACT
* *
33031601 TGTCAAACTTTTACGAATTCTTTTATAACTTCAATTCCTTAAAACATTCAAGAC-ACTCCATTCC
65 TGTCAAACTTTTAC-AGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGA-TCCATTCC
* * * *
33031665 TTCTAGCCATTTTTCGAAA-ATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTTGTC
128 TTCCAACAATTTTTC-AAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTC
* * * *
33031729 ATTTTGTAAACAAGTTTTGGTCTTTGAAATTAAAAACTTATATATGTGACAATCGTTTCTCTGTT
192 ATTTTGTAAACAAGTTTTGGTCTTT-AAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTT
* ** * *
33031794 GGTTCTTGGATGAACTTCTGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTCA
256 GGTTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTA
* *** * * *
33031859 TAGTATTTGTGATGTTCCATTCCTTCAAGCAATTTTTCGAACATTCCATGCTCCGGATATTGAAT
321 AAGTATTAAAGATGATCCATTCCTTCAAGCAATTTTTCGAACATTCCATGCT-CGGAAATTGCAT
* *
33031924 CATTTGGTCTAAATAG----T-TTGT-TAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAC
385 CATTTGGTCTAAATAGTTTTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATTTAC
* * ** *
33031983 GTGAGAATTGTTTCTCTCTTGATTCTTGGACAAACTTCCAAACTTGTCAAACTTTTACGACTTCT
450 GTGAGAATTATTTCTCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACGAGTTCT
* ** *
33032048 TTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATTTTTTGAACATT
515 TTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAACAATTTTTCGAACATT
* * *
33032113 TCATGCTCGGGAAATCGCATCATTTAGTCTAAAGAGTTTGTCATTTTGTAAACAAATTTTGGTCT
580 CCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAATTTTGGTCT
33032178 T
645 T
* *
33032179 TGAATTAAAAACTTATATACGTGAGAATTATTTCTCTCTTGGTTCTTGGACGAGCTTCTAAACTT
1 TGAATTAAAAACTTATATACGTGAGAATTATTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
* * * *** * *
33032244 GTCAAGCTTTTACATGTTCTTTT-TAACATCAGTTCCTGAACGTATTTAAGACGATACATTCCTT
66 GTCAAACTTTTACA-GTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTT
** * * * *
33032308 TGAGCAATTTTTCAAACATTTCATGCTCGGGATATCGCATCATTTGGTCTAAATGGTTTGTCATT
130 CCAACAATTTTTCAAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
* * *
33032373 TTGTAAACAGGTTTTGGTCTTTAAATTAAAAACTTATTTGCGTGAGAATTGTTTCTCTCTTGGTT
195 TTGTAAACAAGTTTTGGTCTTTAAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTT
* * * * *
33032438 CTTAGACGAACCTCTAAACTTGTCAAACTTTTTCAAGTACTTTTATAACTTC-GTTCCTTAAAGT
260 CTTGGACGAACTTCCAAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAGT
* * * * ** *
33032502 ATTCAAGATGATCCATTCCTTCCAGCATTTTTTCGAACATTTCACACTTGAGAAATTGCATCATT
325 ATTAAAGATGATCCATTCCTTCAAGCAATTTTTCGAACATTCCATGCTCG-GAAATTGCATCATT
* *
33032567 TGTTCTAAATAGTTTTTCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAAACTTATTTACAT
389 TGGTCTAAATAGTTTTT-ATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATTTACGT
* * * *
33032631 GAGAATTATTTGTCTCTTGATTCTTGTACGAACTTCTGAACTTGTCAAACTTTTACAAGTTGTTT
452 GAGAATTATTTCTCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACGAGTTCTTT
* * * * *
33032696 AATAACTTCGATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCC
517 TATAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAACAATTTTTCGAACATTCC
*
33032761 ATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC-AATGTTTAGTCTT
582 ATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAAT-TTTGGTCTT
* * * * * *
33032825 TGAATTAAAAATTTATATACGTGACAAATGTTTCTGTCTAGGTTCTTGGACGAACTTCTGAACTT
1 TGAATTAAAAACTTATATACGTGAGAATTATTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
* ** * ** * * *
33032890 GTCAAACTTTTATGAACTCTTTTATAACTTCGGTTTTTTAAAACATTCAAAAAGATCAATTCCTT
66 GTCAAACTTTTA-CAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTT
* * *
33032955 CCAACAATTTTTCGAACATTCCATGCTTGGGATATCGCATCATTTGGTCTAAATAGTTTGTCATT
130 CCAACAATTTTTCAAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT
* * *
33033020 TTGTAAACAAGTTTTGGTCTTTTGAATT-AAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGT
195 TTGTAAACAAGTTTTGGTC-TTTAAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGT
33033084 TCTTGGACGAACTTCCAAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCT
259 TCTTGGACGAACTTCCAAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCT
33033144 GATGCGAGCT
Statistics
Matches: 1373, Mismatches: 203, Indels: 60
0.84 0.12 0.04
Matches are distributed among these distances:
638 1 0.00
639 72 0.05
640 85 0.06
641 176 0.13
642 207 0.15
643 3 0.00
645 8 0.01
646 459 0.33
647 342 0.25
648 20 0.01
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (645 bp):
TGAATTAAAAACTTATATACGTGAGAATTATTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTT
GTCAAACTTTTACAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTC
CAACAATTTTTCAAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTT
TGTAAACAAGTTTTGGTCTTTAAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTC
TTGGACGAACTTCCAAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAGTA
TTAAAGATGATCCATTCCTTCAAGCAATTTTTCGAACATTCCATGCTCGGAAATTGCATCATTTG
GTCTAAATAGTTTTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGA
ATTATTTCTCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACGAGTTCTTTTATA
ACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAACAATTTTTCGAACATTCCATGC
TCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAATTTTGGTCTT
Found at i:33034986 original size:216 final size:215
Alignment explanation
Indices: 33034590--33036544 Score: 2292
Period size: 216 Copynumber: 9.1 Consensus size: 215
33034580 TCGAACATTT
* *
33034590 AAATCGCATCATTTTGTCTAAATAGTTTGTCT-TTTTCTAAACAAGTTTTGGTCTTTGAATTAAA
1 AAATCGCATCATTTGGTCTAAATAGTTTGT-TATTTTGTAAACAAGTTTTGGTCTTTGAATTAAA
* *
33034654 AACTTATACACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACAAACTTTCGAACTTGTCAAACTT
65 AACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTT
* ** * ****
33034719 TTACGAGTTCTTTTGTAACTTCAGTTCCTTATAGTATTTGTTATAATCCATTCCTTCAAGCAATT
130 TTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGAT-ATCCATTCCTTCAAGCAATT
*
33034784 TTTCAAACATTCCATGCTCGGG
194 TTTCGAACATTCCATGCTCGGG
*
33034806 ATATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
1 AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
** * * * *
33034871 ACTTATATACGTGAGAATTGTTTCTCTCTTCATTCTTGGTCAAACTTCCGAACATGTCAAACTTT
66 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTT
* * ** * *
33034936 TACAATTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACTATCCATTCCATCCAGCAATTT
131 TACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA-TATCCATTCCTTCAAGCAATTT
33035001 TTCGAACATTCCATGCTCGGG
195 TTCGAACATTCCATGCTCGGG
* * * ** *
33035022 ATATCGCATCATTTAGTCTACATAGTTAATTATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAA
1 AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* * *
33035087 ACTTATATACGTGATAATTGTTTCTCTCTTCGTTCTTAGACGAACTTTCGAACTTGTCAAACTTT
66 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTT
* * * *
33035152 TACGAGTTCTTTTATAACTTTGATTCCTTAAAGTATTGAAGATGCTCCATTACTTCCAA-CAA-T
131 TACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGAT-ATCCATTCCTT-CAAGCAATT
* * * *
33035215 TTTCTGAGCATTCCATTCTTGTG
194 TTTC-GAACATTCCATGCTCGGG
*
33035238 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
1 AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* ** *
33035303 ACTTATATACGTGAGAATTGTTTCTATCTTGGTTCTTCCACGAGCTTTCGAACTTGTCAAACTTT
66 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTT
* * * ** *
33035368 TACGAGTTCTTTTATAACTTTGGCTCCTTAAAGTA-TAAAGACAATCCATTCCTTCGGGCAA-TA
131 TACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA-TATCCATTCCTTCAAGCAATTT
* * *
33035431 TTCAAAACATTCCATGCTTGCG
195 TTC-GAACATTCCATGCTCGGG
* * *
33035453 AAATCGCATCTTTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTATTGGTCTTTAAATTAAAA
1 AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* * * * * *
33035518 TCCTATTTACATGAGAATTGTTTCTCTCTTGGTTCTAGGACGAACTTTCGAACTAGTCAAACTTT
66 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTT
* * * *
33035583 TACGAGTTCTTTTATAGCTTCGGCTCCTTAAAGTATTCAAGACAATCCATTCCTTTC-AGCAA-T
131 TACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA-TATCCATTCC-TTCAAGCAATT
* * *
33035646 TTTCTTAACCTTCCATGCTCGAG
194 TTTC-GAACATTCCATGCTCGGG
* * *
33035669 AAATCGCATCAGTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAA
1 AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* * * *
33035734 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTAGATGAGCTTTCGAATTTGTCAAACTTT
66 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTT
* * ** * * * * **
33035799 TACAAGTACTTTTATAACTTCAGTTCCTTAAAGTATTTAAGACGATTCATTCCTTCGAGCAATAG
131 TACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGA-TATCCATTCCTTCAAGCAATTT
* * *
33035864 TCCGAACATTCCACGCTCGCG
195 TTCGAACATTCCATGCTCGGG
* * *
33035885 AAATTGCATCTTTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAA
1 AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* * * * * * * * *
33035950 TCCTATTTACGTGAGAATTGTTTCTCTCCTGGTTCTAGGAAGAACTTTCGAACTAGTCAAACCTC
66 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTT
* * * * *
33036015 TATGAGTTCTTTTATAGCTTCGGTTCCTTAAAGTATTCAAGATAATCAATTCCTTCTAA-CTATT
131 TACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGAT-ATCCATTCCTTC-AAGCAATT
** ***
33036079 TCCCGAACATGGAATG-TCCGGG
194 TTTCGAACATTCCATGCT-CGGG
* * * * * * *
33036101 AAATCGCATCAATTGGTCTAAATTGTTTGTCATTTTTTAATCAAGTTTTGTTCTTTAAATTAAAA
1 AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* * * * * * *
33036166 ACTTATATACATGATAAATGTTTCTCTCTTGGATCTTGGATGAACTTCCAAACTTGTCAAACTTT
66 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTT
* * ** * *
33036231 TACGAGTTCTTTTATAACTTTGGTTCCTCATAGTATTCGTGATATTCCACTCCTTCAAGAAATTT
131 TACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGATA-TCCATTCCTTCAAGCAATTT
*
33036296 TTCGAACATTCCACGCTCGGG
195 TTCGAACATTCCATGCTCGGG
** * ** *
33036317 GTATCACATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCCATGAATTAAAG
1 AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* *
33036382 ACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGACGAAC-TTCTGAACTAGTCAAACTT
66 ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTT
* * *** *
33036446 TTACGAGTTCTTTTATAACTTTGATTCCTCAAAGTATTTGTGATGACCCATTCCTTCAAGCAATT
130 TTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGAT-ATCCATTCCTTCAAGCAATT
* **
33036511 TTTCAAACATTCCATGCTCTAG
194 TTTCGAACATTCCATGCTCGGG
*
33036533 ATATCGCATCAT
1 AAATCGCATCAT
33036545 GATATGGCCA
Statistics
Matches: 1479, Mismatches: 241, Indels: 38
0.84 0.14 0.02
Matches are distributed among these distances:
214 1 0.00
215 200 0.14
216 1267 0.86
217 11 0.01
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (215 bp):
AAATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
ACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTT
TACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGATATCCATTCCTTCAAGCAATTTT
TCGAACATTCCATGCTCGGG
Found at i:33036148 original size:863 final size:863
Alignment explanation
Indices: 33034590--33036543 Score: 2472
Period size: 863 Copynumber: 2.3 Consensus size: 863
33034580 TCGAACATTT
*
33034590 AAATCGCATCATTTT-GTCTAAATAGTTTGTCT-TTTTCTAAACAAGTTTTGGTCTTTGAATTAA
1 AAATCGCATC-TTTTGGTCTAAATAGTTTGT-TATTTTGTAAACAAGTTTTGGTCTTTGAATT-A
* * * *
33034653 AAACTTATACACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACAAACTTTCGAACTTGTCAAACT
63 AAACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTAGTCAAACT
* * * **** *
33034718 TTTACGAGTTCTTTTGTAACTTCAGTTCCTTATAGTATTTGTTATAATCCATTCCTTCAAGCAAT
128 TTTACGAGTTCTTTTATAACTTCAGCTCCTTAAAGTATTCAAGACAATCCATTCCTTCAAGCAAT
* * * *
33034783 TTTTCAAACATTCCATGCTCGGGATATCGCATCATTTGGTCTAAATAGTTTGTTATTTTGTAAAC
193 TTTTCAAACATTCCATGCTCGAGAAATCGCATCAGTTGGTCTAAATAGTTTGTCATTTTGTAAAC
*
33034848 AAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTCATTCTTGGTCA
258 AAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTCATTCTTGATCA
* * **
33034913 AACTTCCGAACATGTCAAACTTTTACAATTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGA
323 AACTTCCGAACATGTCAAACTTTTACAAGTACTTTTATAACTTCAGTTCCTTAAAACATTCAAGA
* ** * * * * *
33034978 CTATCCATTCCATCCAGCAATTTTTCGAACATTCCATGCTCGGGATATCGCATCATTTAGTCTAC
388 CGATCCATTCCATCCAGCAATAGTCCGAACATTCCACGCTCGCGAAATCGCATCATTTAGTCTAA
* *
33035043 ATAGTTAATTATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAAACTTATATACGTGATAATTGT
453 ATAGTTAATTATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAAACCTATATACGTGAGAATTGT
* * * * * *
33035108 TTCTCTCTTCGTTCTTAGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTT
518 TTCTCTCCTCGTTCTTAGAAGAACTTTCGAACTAGTCAAACCTCTACGAGTTCTTTTATAACTTC
* ** * * * * * * * *
33035173 GATTCCTTAAAGTATTGAAGATGCTCCATTACTTCCAACAATTTTCTGAGCATTCCATTCTTGTG
583 GATTCCTTAAAGTATTCAAGATAATCAATTACTTCCAACAATTTCCCGAACATGCAATTCTCGGG
* *
33035238 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
648 AAATCGCATCAATTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAA
* * * * * *
33035303 ACTTATATACGTGAGAATTGTTTCTATCTTGGTTCTTCCACGAGCTTTCGAACTTGTCAAACTTT
713 ACTTATATACATGAGAAATGTTTCTATCTTGGATCTTCCACGAACTTCCAAACTTGTCAAACTTT
* * ** *
33035368 TACGAGTTCTTTTATAACTTTGGCTCCTTAAAGTA-TAAAGACAATCCATTCCTTCGGGCAA-TA
778 TACGAGTTCTTTTATAACTTTGGCTCCTCAAAGTATTAAAGACAATCCACTCCTTCAAGAAATTA
* *
33035431 TTCAAAACATTCCATGCTTGCG
843 TTC-AAACATTCCACGCTCGCG
* *
33035453 AAATCGCATCTTTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTATTGGTCTTTAAATTAAAA
1 AAATCGCATCTTTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* * *
33035518 TCCTATTTACATGAGAATTGTTTCTCTCTTGGTTCTAGGACGAACTTTCGAACTAGTCAAACTTT
66 -CTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTAGTCAAACTTT
* *
33035583 TACGAGTTCTTTTATAGCTTCGGCTCCTTAAAGTATTCAAGACAATCCATTCCTTTC-AGCAA-T
130 TACGAGTTCTTTTATAACTTCAGCTCCTTAAAGTATTCAAGACAATCCATTCC-TTCAAGCAATT
* *
33035646 TTTCTTAACCTTCCATGCTCGAGAAATCGCATCAGTTGGTCTAAATAGTTTGTCATTTTGTAAAC
194 TTTC-AAACATTCCATGCTCGAGAAATCGCATCAGTTGGTCTAAATAGTTTGTCATTTTGTAAAC
* **
33035711 AAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTAGAT-
258 AAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTCATTCTT-GATC
* * * ** ** *
33035775 GAGCTTTCGAATTTGTCAAACTTTTACAAGTACTTTTATAACTTCAGTTCCTTAAAGTATTTAAG
322 AAACTTCCGAACATGTCAAACTTTTACAAGTACTTTTATAACTTCAGTTCCTTAAAACATTCAAG
* * * * * *
33035840 ACGATTCATTCCTTCGAGCAATAGTCCGAACATTCCACGCTCGCGAAATTGCATCTTTTGGTCTA
387 ACGATCCATTCCATCCAGCAATAGTCCGAACATTCCACGCTCGCGAAATCGCATCATTTAGTCTA
** * *
33035905 AATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAATCCTATTTACGTGAGAATTG
452 AATAGTTAATTATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAAACCTATATACGTGAGAATTG
* * *
33035970 TTTCTCTCCTGGTTC-TAGGAAGAACTTTCGAACTAGTCAAACCTCTATGAGTTCTTTTATAGCT
517 TTTCTCTCCTCGTTCTTA-GAAGAACTTTCGAACTAGTCAAACCTCTACGAGTTCTTTTATAACT
* * * * *
33036034 TCGGTTCCTTAAAGTATTCAAGATAATCAATTCCTTCTAACTATTTCCCGAACATGGAATGTC-C
581 TCGATTCCTTAAAGTATTCAAGATAATCAATTACTTCCAACAATTTCCCGAACATGCAAT-TCTC
* * * *
33036098 GGGAAATCGCATCAATTGGTCTAAATTGTTTGTCATTTTTTAATCAAGTTTTGTTCTTTAAATTA
645 GGGAAATCGCATCAATTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTAAATTA
* * ** *
33036163 AAAACTTATATACATGATAAATGTTTCTCTCTTGGATCTTGGATGAACTTCCAAACTTGTCAAAC
710 AAAACTTATATACATGAGAAATGTTTCTATCTTGGATCTTCCACGAACTTCCAAACTTGTCAAAC
* * *** * *
33036228 TTTTACGAGTTCTTTTATAACTTTGGTTCCTCATAGTATTCGTGATATTCCACTCCTTCAAGAAA
775 TTTTACGAGTTCTTTTATAACTTTGGCTCCTCAAAGTATTAAAGACAATCCACTCCTTCAAGAAA
* * *
33036293 TTTTTCGAACATTCCACGCTCGGG
840 TTATTCAAACATTCCACGCTCGCG
** * * **
33036317 GTATCACATCATTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCCATGAATTAAAG
1 AAATCGCATCTTTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAA-
33036382 ACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGACGAAC-TTCTGAACTAGTCAAACTT
65 ACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTAGTCAAACTT
* * * *** ** *
33036446 TTACGAGTTCTTTTATAACTT-TGATTCCTCAAAGTATTTGTGATGACCCATTCCTTCAAGCAAT
129 TTACGAGTTCTTTTATAACTTCAG-CTCCTTAAAGTATTCAAGACAATCCATTCCTTCAAGCAAT
* *
33036510 TTTTCAAACATTCCATGCTCTAGATATCGCATCA
193 TTTTCAAACATTCCATGCTCGAGAAATCGCATCA
33036544 TGATATGGCC
Statistics
Matches: 930, Mismatches: 146, Indels: 29
0.84 0.13 0.03
Matches are distributed among these distances:
862 16 0.02
863 682 0.73
864 222 0.24
865 10 0.01
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (863 bp):
AAATCGCATCTTTTGGTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
CTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTAGTCAAACTTTT
ACGAGTTCTTTTATAACTTCAGCTCCTTAAAGTATTCAAGACAATCCATTCCTTCAAGCAATTTT
TCAAACATTCCATGCTCGAGAAATCGCATCAGTTGGTCTAAATAGTTTGTCATTTTGTAAACAAG
TTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTCATTCTTGATCAAAC
TTCCGAACATGTCAAACTTTTACAAGTACTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGA
TCCATTCCATCCAGCAATAGTCCGAACATTCCACGCTCGCGAAATCGCATCATTTAGTCTAAATA
GTTAATTATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAAACCTATATACGTGAGAATTGTTTC
TCTCCTCGTTCTTAGAAGAACTTTCGAACTAGTCAAACCTCTACGAGTTCTTTTATAACTTCGAT
TCCTTAAAGTATTCAAGATAATCAATTACTTCCAACAATTTCCCGAACATGCAATTCTCGGGAAA
TCGCATCAATTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTAAATTAAAAACT
TATATACATGAGAAATGTTTCTATCTTGGATCTTCCACGAACTTCCAAACTTGTCAAACTTTTAC
GAGTTCTTTTATAACTTTGGCTCCTCAAAGTATTAAAGACAATCCACTCCTTCAAGAAATTATTC
AAACATTCCACGCTCGCG
Found at i:33036950 original size:39 final size:39
Alignment explanation
Indices: 33036904--33036994 Score: 164
Period size: 39 Copynumber: 2.3 Consensus size: 39
33036894 TTAAATAGGG
33036904 TTTTAATGTGTCTTAGTTTGATACATATTTAATAGTTGT
1 TTTTAATGTGTCTTAGTTTGATACATATTTAATAGTTGT
* *
33036943 TTTTAATGTGTCCTAGTTTGATACATATTTAATAGTTTT
1 TTTTAATGTGTCTTAGTTTGATACATATTTAATAGTTGT
33036982 TTTTAATGTGTCT
1 TTTTAATGTGTCT
33036995 AAGATTGAGA
Statistics
Matches: 49, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
39 49 1.00
ACGTcount: A:0.24, C:0.07, G:0.14, T:0.55
Consensus pattern (39 bp):
TTTTAATGTGTCTTAGTTTGATACATATTTAATAGTTGT
Found at i:33037084 original size:32 final size:32
Alignment explanation
Indices: 33037048--33037142 Score: 172
Period size: 32 Copynumber: 3.0 Consensus size: 32
33037038 AGCTAAAATT
33037048 AATTAGCTGATTAATGTGTTTCAGGTACATGC
1 AATTAGCTGATTAATGTGTTTCAGGTACATGC
33037080 AATTAGCTGATTAATGTGTTTCAGGTACATGC
1 AATTAGCTGATTAATGTGTTTCAGGTACATGC
* *
33037112 AATTAGCTGATTAATATATTTCAGGTACATG
1 AATTAGCTGATTAATGTGTTTCAGGTACATG
33037143 TATGGATGGC
Statistics
Matches: 61, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 61 1.00
ACGTcount: A:0.31, C:0.12, G:0.20, T:0.38
Consensus pattern (32 bp):
AATTAGCTGATTAATGTGTTTCAGGTACATGC
Found at i:33037450 original size:10 final size:10
Alignment explanation
Indices: 33037435--33037467 Score: 57
Period size: 10 Copynumber: 3.3 Consensus size: 10
33037425 TCTAACCTAG
33037435 TCCATTCAGC
1 TCCATTCAGC
33037445 TCCATTCAGC
1 TCCATTCAGC
*
33037455 TCTATTCAGC
1 TCCATTCAGC
33037465 TCC
1 TCC
33037468 TTACTTAATT
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
10 21 1.00
ACGTcount: A:0.18, C:0.39, G:0.09, T:0.33
Consensus pattern (10 bp):
TCCATTCAGC
Found at i:33038720 original size:216 final size:215
Alignment explanation
Indices: 33038136--33040807 Score: 3039
Period size: 216 Copynumber: 12.4 Consensus size: 215
33038126 ACATACCTCG
* * *
33038136 TTGAATTAAAAACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCAAACT
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
* * * * * * *
33038201 TGTAAAACTTTTACAAGTTCTTTTATAACTTCGATTCCTTAAAACAATCAAGATGATCAATTCCT
66 TGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCCT
* * * * *
33038266 TCCAGCAA-TTTTCTGAGCATTCCATGCTCAGGAAATTGCATCATTTGTTCTAAATAGTTT-TCC
131 TCAAGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT-C
33038329 ATTTTGTAAACAAGTTTTGGT-T
194 ATTTTGTAAACAAGTTTT-GTCT
* * * ** *
33038351 TGTGAATTAAAGAA-TTATTTACGTGAGAATT-TTTGTCTCTTGATTCTTGGGTGAACTTACGAA
1 T-TGAATTAAA-AACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAA
** * * * **
33038414 CTTGTCAAACTTTTACGCTTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGACGATCCATTC
64 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTC
* * * * *
33038479 CTTCCAA-CAATGTTCCAAACATTCCATCCTCGGGAAATCACATCATTTGGTCTAAATAGTTTGT
129 CTT-CAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
* *
33038543 CATTTTGCAAACAAGTTTTGCCCT
193 CATTTTGTAAACAAGTTTTG-TCT
* * * * * *
33038567 TCGAATTAAAAATTTATTTACGTGAGAATTGTTTCTCTCTAGGTTCTTGGACAAACTTTCGAACT
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
* * * * * ** *
33038632 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTTCATATAGCATTCGTGATGATCCATTCCT
66 TGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCCT
* *
33038697 TCAAGCAATTTTTCGAACATTCCATGCTCGGGATATCGCATCATTTGGTCTAAATAGTTTGTTAT
131 TCAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCAT
33038762 TTTGTAAACAAGTTTTGGTCT
196 TTTGTAAACAAGTTTT-GTCT
* * *
33038783 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTCTGGTTTTTGGTCGAACTTCCAAAC
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCT-TGGTTCTTGGACGAACTTCCGAAC
* ** *
33038848 TTGTCAAACTTTTACGAGTTCTTTTATAACTTTGGCTCAGTAAAACATTCAAGACGATCCGTTCC
65 TTGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCC
* * * * * * * * *
33038913 TTCTAGCAGTTTTCCAAACATTCCATGCTCGGGATATCGCATCATTTTGTCTACATAGTTTATTA
130 TTCAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCA
33038978 TTTTGTAAACAAGTTTTGGTCT
195 TTTTGTAAACAAGTTTT-GTCT
* * *
33039000 TTAAATT-AAAACTTATATACATGATAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
* ** *
33039064 TGTCAAACTTTTACGAGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCT
66 TGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCCT
* * * * * * *
33039129 TCCAA-CAAATTTTTTGAACATTCCATTCTTGCGAAATCGTATCATTTGGTTTAAATAGTTTGAC
131 T-CAAGC-AATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTC
* *
33039193 AATTTATAAACAAGTTTATGTCT
194 ATTTTGTAAACAAGTTT-TGTCT
* * * * *
33039216 TTGAATTAAAAACTTACATACGTGAGAATTGTTTC-CATCATGATTCCTGCACGAACTTCCGAAC
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACTTCCGAAC
* * * **
33039280 TTGTCAAATTTTTACAAGTTCTTTTATAACTTTGGCTCCTTAAAGTATTCAAGACGATCCATTCC
65 TTGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCC
* * * * * * *
33039345 TTTC-AGTAAGTTTCCTAACATTCCATGCTCGAGAAATCGTATCAGTTGGTCTAAATAGTTTGTC
130 -TTCAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTC
33039409 ATTTTGTAAACAAGTTTTGTTCT
194 ATTTTGTAAACAAGTTTTG-TCT
* * * *
33039432 TTGAATTAAAAACTTATATATGTGAGAATTATGTCTCTCTTGGTTCTTGGACGAACTTCC-AAAT
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
* * * *
33039496 TCGTCAAACTTTTGCGAGTTCTTTTATAACTTCT-ATTCCTTAAAACATTCAAAACAATCCATTC
66 T-GTCAAACTTTTACGAGTTCTTTTATAACTT-TGGTTCCTTAAAACATTCAAGACGATCCATTC
* * **
33039560 CATCTAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTCAT-TGAAATAGTTTGT
129 CTTCAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCT-AAATAGTTTGT
33039624 CATTTTGTAAACAAGTTTTGGTCT
193 CATTTTGTAAACAAGTTTT-GTCT
* * * * *
33039648 TTGAAGTAAAAACTTATATACGTGATAATTGTTTCTCTCTTGGTTTTTGGTCGAACTTCCAAACT
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
* * ** *
33039713 TGTCAAACTTTTACAAGTTCTTTTATAACTTTGGCTCAGTAAAACATTCAAGACGATCCGTTCCT
66 TGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCCT
* * * * * * * *
33039778 TCTAGCAGTTTTCCAAACATTCCATGCTCGGGATATCGCATCATTTGGTCTACATAGTTTATTAT
131 TCAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCAT
*
33039843 TTTGTAAACAAGTTTTGGTCA
196 TTTGTAAACAAGTTTT-GTCT
* * * * *
33039864 TTAAATTAAAAACTTATATACATGATAATTATTTCTCTCTTGGTTCTTGGATGAACTTCCGAACT
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
* ** *
33039929 TGTCAAACTTTTACGAGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCT
66 TGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCCT
* * * * *
33039994 TCCAA-CAATTTTTCGAACATTCCATTCTTGCGAAATCGCATCATTTGGTTTAAATAGTTTGACA
131 T-CAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCA
* *
33040058 ATTTATAAACAAGTTTATGTCT
195 TTTTGTAAACAAGTTT-TGTCT
* * * * * **
33040080 TTGAATTAAAAACTTACATTCGTGAGAATTGTTTC-CATCATGATTCCTACACGAACTTCCGAAC
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACTTCCGAAC
* * * **
33040144 TTGTCAAATTTTTACAATGTTCTTTTATAACTTTGGCTCCTTAAAGTATTCAAGACGATCCATTC
65 TTGTCAAACTTTTACGA-GTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTC
* * * * * * *
33040209 CTTTC-AGTAAGTTTCCTAACATTCCATGCTCGAGAAATCGCATTAGTTGGTCTAAATAGTTTGT
129 C-TTCAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
33040273 CATTTTGTAAACAAGTTTTGTTCT
193 CATTTTGTAAACAAGTTTTG-TCT
* * * * *
33040297 TTGAATTAAAAACTTATATATGTGAGAATTATGTCTCTCTTGGTTCTTGGACGAACTTCCAAATT
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
* * *
33040362 TGTCAAACTTTTGCGAGTTCTTTTATAACTTCT-ATTCCTTAAAACATTCAAGACAATCCATTCC
66 TGTCAAACTTTTACGAGTTCTTTTATAACTT-TGGTTCCTTAAAACATTCAAGACGATCCATTCC
* * * * * **
33040426 ATCTAGCCATTTTTTGAACATTCCATGCTTGGGAAATCGCATCATTTCAT-TGAAATAGTTTGTC
130 TTCAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCT-AAATAGTTTGTC
*
33040490 ATTTTGAAAACAAGTTTTGGTCT
194 ATTTTGTAAACAAGTTTT-GTCT
* ** *
33040513 TTGAATTAAAAACTTATATACGTGATAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTTGAATT
1 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
* * *
33040578 TGTCAAACTTTTACAAATTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGATGATCCATTCCT
66 TGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCCT
** * * * * *
33040643 TCCTGTAA-TTTTCTGAGCATTCCATGCTCAGGAAATTGTATCATTTGGTCTAAATAGTTT-TCC
131 TCAAGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT-C
33040706 ATTTTGTAAACAAGTTTTGGT-T
194 ATTTTGTAAACAAGTTTT-GTCT
* * * * * * * * *
33040728 TATGAATTAAAATCCTATTTATGTGAGAATT-TTTATCTCTTGATTCTAGGAAGAACTTACGAAC
1 T-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAAC
33040792 TTGTCAAACTTTTACG
65 TTGTCAAACTTTTACG
33040808 CGTTTTGTAA
Statistics
Matches: 2078, Mismatches: 333, Indels: 92
0.83 0.13 0.04
Matches are distributed among these distances:
214 3 0.00
215 318 0.15
216 1293 0.62
217 459 0.22
218 5 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (215 bp):
TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
TGTCAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCCT
TCAAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCAT
TTTGTAAACAAGTTTTGTCT
Found at i:33039878 original size:865 final size:862
Alignment explanation
Indices: 33038139--33040807 Score: 3917
Period size: 865 Copynumber: 3.1 Consensus size: 862
33038129 TACCTCGTTG
*
33038139 AATTAAAAACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGT
1 AATTAAAAACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGT
* * * * * ** * *
33038204 AAAACTTTTACAAGTTCTTTTATAACTTCGATTCCTTAAAACAATCAAGATGATCAATTCCTTCC
66 CAAACTTTTACGAGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCC
* * * * * * ** *
33038269 AGCAATTTTCTGAGCATTCCATGCTCAG-GAAATTGCATCATTT-GTTCTAAATAGTTTTCCATT
131 AACAATTTTTTGAACATTCCATTCT-TGCGAAATCGCATCATTTGGTT-TAAATAGTTTGACAAT
* ** * *
33038332 TTGTAAACAAGTTT-TGGT-TTGTGAATTAAAGAA-TTATTTACGTGAGAATT-TTTGTC-TCTT
194 TTATAAACAAGTTTAT-GTCTT-TGAATTAAA-AACTTACATACGTGAGAATTGTTT-CCATCAT
* *** * * *** * **
33038392 GATTCTTGGGTGAACTTACGAACTTGTCAAACTTTTACGCTTTCTTTTATAACTTCGATTCCTTA
255 GATTCCTGCACGAACTTCCGAACTTGTCAAATTTTTACAAGTTCTTTTATAACTTTGGCTCCTTA
* * ** * * * *
33038457 TAGTATTCAAGACGATCCATTCCTTCCAACAA-TGTTCCAAACATTCCATCCTCGGGAAATCACA
320 AAGTATTCAAGACGATCCATTCCTTTCAGTAAGT-TTCCTAACATTCCATGCTCGAGAAATCGCA
* * ** * * *
33038521 TCATTTGGTCTAAATAGTTTGTCATTTTGCAAACAAGTTTTGCCCTTCGAATTAAAAATTTATTT
384 TCAGTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATAT
* * * * * * * *
33038586 ACGTGAGAATTGTTTCTCTCTAGGTTCTTGGACAAACTTTCGAACTTGTCAAACTTTTACGAGTT
449 ATGTGAGAATTATGTCTCTCTTGGTTCTTGGACGAAC-TTCCAAATTGTCAAACTTTTGCGAGTT
** * * * * ** ** * *
33038651 CTTTTATAACTTCGGTTTCATATAGCATTCGTGATGATCCATTCCTTCAAGCAATTTTTCGAACA
513 CTTTTATAACTTCTATTCCTTAAAACATTCAAGACAATCCATTCCATCTAGCAATTTTTCGAACA
* ** *
33038716 TTCCATGCTCGGGATATCGCATCATTTGGTCT-AAATAGTTTGTTATTTTGTAAACAAGTTTTGG
578 TTCCATGCTCGGGAAATCGCATCATTTCAT-TGAAATAGTTTGTCATTTTGTAAACAAGTTTTGG
*
33038780 TCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTCTGGTTTTTGGTCGAACTTCCA
642 TCTTTGAATTAAAAACTTATATACGTGATAATTGTTTCTCTCT-TGGTTTTTGGTCGAACTTCCA
*
33038845 AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTGGCTCAGTAAAACATTCAAGACGATCCGT
706 AACTTGTCAAACTTTTACAAGTTCTTTTATAACTTTGGCTCAGTAAAACATTCAAGACGATCCGT
*
33038910 TCCTTCTAGCAGTTTTCCAAACATTCCATGCTCGGGATATCGCATCATTTTGTCTACATAGTTTA
771 TCCTTCTAGCAGTTTTCCAAACATTCCATGCTCGGGATATCGCATCATTTGGTCTACATAGTTTA
33038975 TTATTTTGTAAACAAGTTTTGGTCTTTA
836 TTATTTTGTAAACAAGTTTTGGTC-TTA
* *
33039003 AATT-AAAACTTATATACATGATAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGT
1 AATTAAAAACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGT
33039067 CAAACTTTTACGAGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCC
66 CAAACTTTTACGAGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCC
*
33039132 AACAAATTTTTTGAACATTCCATTCTTGCGAAATCGTATCATTTGGTTTAAATAGTTTGACAATT
131 AAC-AATTTTTTGAACATTCCATTCTTGCGAAATCGCATCATTTGGTTTAAATAGTTTGACAATT
33039197 TATAAACAAGTTTATGTCTTTGAATTAAAAACTTACATACGTGAGAATTGTTTCCATCATGATTC
195 TATAAACAAGTTTATGTCTTTGAATTAAAAACTTACATACGTGAGAATTGTTTCCATCATGATTC
33039262 CTGCACGAACTTCCGAACTTGTCAAATTTTTACAAGTTCTTTTATAACTTTGGCTCCTTAAAGTA
260 CTGCACGAACTTCCGAACTTGTCAAATTTTTACAAGTTCTTTTATAACTTTGGCTCCTTAAAGTA
*
33039327 TTCAAGACGATCCATTCCTTTCAGTAAGTTTCCTAACATTCCATGCTCGAGAAATCGTATCAGTT
325 TTCAAGACGATCCATTCCTTTCAGTAAGTTTCCTAACATTCCATGCTCGAGAAATCGCATCAGTT
33039392 GGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGTGA
390 GGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGTGA
33039457 GAATTATGTCTCTCTTGGTTCTTGGACGAACTTCCAAATTCGTCAAACTTTTGCGAGTTCTTTTA
455 GAATTATGTCTCTCTTGGTTCTTGGACGAACTTCCAAATT-GTCAAACTTTTGCGAGTTCTTTTA
*
33039522 TAACTTCTATTCCTTAAAACATTCAAAACAATCCATTCCATCTAGCAATTTTTCGAACATTCCAT
519 TAACTTCTATTCCTTAAAACATTCAAGACAATCCATTCCATCTAGCAATTTTTCGAACATTCCAT
33039587 GCTCGGGAAATCGCATCATTTCATTGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGA
584 GCTCGGGAAATCGCATCATTTCATTGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGA
*
33039652 AGTAAAAACTTATATACGTGATAATTGTTTCTCTCTTGGTTTTTGGTCGAACTTCCAAACTTGTC
649 ATTAAAAACTTATATACGTGATAATTGTTTCTCTCTTGGTTTTTGGTCGAACTTCCAAACTTGTC
33039717 AAACTTTTACAAGTTCTTTTATAACTTTGGCTCAGTAAAACATTCAAGACGATCCGTTCCTTCTA
714 AAACTTTTACAAGTTCTTTTATAACTTTGGCTCAGTAAAACATTCAAGACGATCCGTTCCTTCTA
33039782 GCAGTTTTCCAAACATTCCATGCTCGGGATATCGCATCATTTGGTCTACATAGTTTATTATTTTG
779 GCAGTTTTCCAAACATTCCATGCTCGGGATATCGCATCATTTGGTCTACATAGTTTATTATTTTG
33039847 TAAACAAGTTTTGGTCATTA
844 TAAACAAGTTTTGGTC-TTA
* *
33039867 AATTAAAAACTTATATACATGATAATTATTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGT
1 AATTAAAAACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGT
33039932 CAAACTTTTACGAGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCC
66 CAAACTTTTACGAGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCC
*
33039997 AACAATTTTTCGAACATTCCATTCTTGCGAAATCGCATCATTTGGTTTAAATAGTTTGACAATTT
131 AACAATTTTTTGAACATTCCATTCTTGCGAAATCGCATCATTTGGTTTAAATAGTTTGACAATTT
*
33040062 ATAAACAAGTTTATGTCTTTGAATTAAAAACTTACATTCGTGAGAATTGTTTCCATCATGATTCC
196 ATAAACAAGTTTATGTCTTTGAATTAAAAACTTACATACGTGAGAATTGTTTCCATCATGATTCC
*
33040127 TACACGAACTTCCGAACTTGTCAAATTTTTACAATGTTCTTTTATAACTTTGGCTCCTTAAAGTA
261 TGCACGAACTTCCGAACTTGTCAAATTTTTACAA-GTTCTTTTATAACTTTGGCTCCTTAAAGTA
*
33040192 TTCAAGACGATCCATTCCTTTCAGTAAGTTTCCTAACATTCCATGCTCGAGAAATCGCATTAGTT
325 TTCAAGACGATCCATTCCTTTCAGTAAGTTTCCTAACATTCCATGCTCGAGAAATCGCATCAGTT
33040257 GGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGTGA
390 GGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGTGA
33040322 GAATTATGTCTCTCTTGGTTCTTGGACGAACTTCCAAATTTGTCAAACTTTTGCGAGTTCTTTTA
455 GAATTATGTCTCTCTTGGTTCTTGGACGAACTTCCAAA-TTGTCAAACTTTTGCGAGTTCTTTTA
* *
33040387 TAACTTCTATTCCTTAAAACATTCAAGACAATCCATTCCATCTAGCCATTTTTTGAACATTCCAT
519 TAACTTCTATTCCTTAAAACATTCAAGACAATCCATTCCATCTAGCAATTTTTCGAACATTCCAT
* *
33040452 GCTTGGGAAATCGCATCATTTCATTGAAATAGTTTGTCATTTTGAAAACAAGTTTTGGTCTTTGA
584 GCTCGGGAAATCGCATCATTTCATTGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGA
* * *** *
33040517 ATTAAAAACTTATATACGTGATAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTTGAATTTGTC
649 ATTAAAAACTTATATACGTGATAATTGTTTCTCTCTTGGTTTTTGGTCGAACTTCCAAACTTGTC
* * ** * *
33040582 AAACTTTTACAAATTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGATGATCCATTCCTTCCT
714 AAACTTTTACAAGTTCTTTTATAACTTTGGCTCAGTAAAACATTCAAGACGATCCGTTCCTT-CT
* * ** * * * * * * *
33040647 -GTAATTTTCTGAGCATTCCATGCTCAGGAAATTGTATCATTTGGTCTAAATAGTTT-TCCATTT
778 AGCAGTTTTCCAAACATTCCATGCTCGGGATATCGCATCATTTGGTCTACATAGTTTAT-TATTT
33040710 TGTAAACAAGTTTTGGT-TTA
842 TGTAAACAAGTTTTGGTCTTA
* * * ** * * * * *
33040730 TGAATTAAAATCCTATTTATGTGAGAATT-TTTATCTCTTGATTCTAGGAAGAACTTACGAACTT
1 --AATTAAAAACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTT
33040794 GTCAAACTTTTACG
64 GTCAAACTTTTACG
33040808 CGTTTTGTAA
Statistics
Matches: 1654, Mismatches: 133, Indels: 36
0.91 0.07 0.02
Matches are distributed among these distances:
863 121 0.07
864 479 0.29
865 1049 0.63
866 5 0.00
ACGTcount: A:0.29, C:0.18, G:0.14, T:0.40
Consensus pattern (862 bp):
AATTAAAAACTTATATACATGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGT
CAAACTTTTACGAGTTCTTTTACAACTTTGGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCC
AACAATTTTTTGAACATTCCATTCTTGCGAAATCGCATCATTTGGTTTAAATAGTTTGACAATTT
ATAAACAAGTTTATGTCTTTGAATTAAAAACTTACATACGTGAGAATTGTTTCCATCATGATTCC
TGCACGAACTTCCGAACTTGTCAAATTTTTACAAGTTCTTTTATAACTTTGGCTCCTTAAAGTAT
TCAAGACGATCCATTCCTTTCAGTAAGTTTCCTAACATTCCATGCTCGAGAAATCGCATCAGTTG
GTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGTGAG
AATTATGTCTCTCTTGGTTCTTGGACGAACTTCCAAATTGTCAAACTTTTGCGAGTTCTTTTATA
ACTTCTATTCCTTAAAACATTCAAGACAATCCATTCCATCTAGCAATTTTTCGAACATTCCATGC
TCGGGAAATCGCATCATTTCATTGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAAT
TAAAAACTTATATACGTGATAATTGTTTCTCTCTTGGTTTTTGGTCGAACTTCCAAACTTGTCAA
ACTTTTACAAGTTCTTTTATAACTTTGGCTCAGTAAAACATTCAAGACGATCCGTTCCTTCTAGC
AGTTTTCCAAACATTCCATGCTCGGGATATCGCATCATTTGGTCTACATAGTTTATTATTTTGTA
AACAAGTTTTGGTCTTA
Found at i:33040857 original size:103 final size:104
Alignment explanation
Indices: 33040707--33040909 Score: 257
Period size: 103 Copynumber: 2.0 Consensus size: 104
33040697 TAGTTTTCCA
* * * **
33040707 TTTTGTAAACAAGTTTTGGTTTATGAATTAAAATCCTATTTATGTGAGAATT-TTTATCTCTTGA
1 TTTTGTAAACAAGTTTTGGTTTATGAATTAAAAACCTATATACGTGAGAATTGTTTATCTCCAGA
33040771 TTCTAGGAAGAACTTACGAACTTGTCAAACTTTTACGCG
66 TTCTAGGAAGAACTTACGAACTTGTCAAACTTTTACGCG
* * *
33040810 TTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCCAG
1 TTTTGTAAACAAGTTTTGGTT-TATGAATTAAAAACCTATATACGTGAGAATTGTTTATCTCCAG
* * * ** *
33040874 GTTCTTGGACGAACTTTTGAACTTGTTAAACTTTTA
65 ATTCTAGGAAGAACTTACGAACTTGTCAAACTTTTA
33040910 TGAGTTATTT
Statistics
Matches: 84, Mismatches: 14, Indels: 3
0.83 0.14 0.03
Matches are distributed among these distances:
102 3 0.04
103 43 0.51
104 38 0.45
ACGTcount: A:0.29, C:0.13, G:0.15, T:0.43
Consensus pattern (104 bp):
TTTTGTAAACAAGTTTTGGTTTATGAATTAAAAACCTATATACGTGAGAATTGTTTATCTCCAGA
TTCTAGGAAGAACTTACGAACTTGTCAAACTTTTACGCG
Found at i:33041076 original size:319 final size:320
Alignment explanation
Indices: 33040491--33041127 Score: 890
Period size: 319 Copynumber: 2.0 Consensus size: 320
33040481 TAGTTTGTCA
* **
33040491 TTTTGAAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGATAATTGTTTCTCTCTTGG
1 TTTTGAAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCCAGG
* * * *
33040556 TTCTTGGACGAACTTTTGAATTTGTCAAACTTTTACAAATTCTTTTATAACTTTGGTTCCTTAAA
66 TTCTTGGACGAACTTTTGAACTTGTCAAACTTTTACAAATTATTTTATAACTTCGGTTCCTCAAA
* * * * * *
33040621 ACATTCAAGATGATCCATTCCTTCCTGTAATTTTCTGAGCATTCCATGCTCAGGAAATTGTATCA
131 ACATTCAAGACGATCCATTCCTTCCTATAATTTTCTGAACATTCCATGCTCAAGAAATCGCATCA
** * * *
33040686 TTTGGTCTAAATAGTTTTCCATTTTGTAAACAAGTTTTGGTTTATGAATTAAAATCCTATTTATG
196 TTTCATCTAAATAGTTTTCCATTTTGTAAACAAGTTTTGGTTTATGAAATAAAAACCTATTTACG
* *
33040751 TGAGAAT-TTTTATCTCTTGATTCTAGGAAGAACTTACGAACTTGTCAAACTTTTACGCG
261 TGAGAATAGTTTATCTCTTGATTCTAGGAAGAACTTACAAACTTGTCAAACTTTTACGCG
* *
33040810 TTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCCAGG
1 TTTTGAAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCCAGG
* ** *
33040875 TTCTTGGACGAACTTTTGAACTTGTTAAACTTTTATGAGTTATTTTATAACTTCGGTTCCTCAAA
66 TTCTTGGACGAACTTTTGAACTTGTCAAACTTTTACAAATTATTTTATAACTTCGGTTCCTCAAA
33040940 ACATTCAAGACGATCCATTCCTT-CTATCAATTTT-TCGAACATTCCATGCTCAAGAAATCGCAT
131 ACATTCAAGACGATCCATTCCTTCCTAT-AATTTTCT-GAACATTCCATGCTCAAGAAATCGCAT
* *
33041003 CATTTCAT-TGAAATAGTTTGT-CATTTTGTAAACGAGTTTTGGTCTT-TGAAATAAAAACTTAT
194 CATTTCATCT-AAATAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTATGAAATAAAAACCTAT
* * * * *
33041065 TTACGTGAGAATAGTTTCTCTCTTGGTTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACG
256 TTACGTGAGAATAGTTTATCTCTTGATTCTAGGAAGAACTTACAAACTTGTCAAACTTTTACG
33041128 AGTTCTTTTA
Statistics
Matches: 279, Mismatches: 33, Indels: 11
0.86 0.10 0.03
Matches are distributed among these distances:
318 5 0.02
319 228 0.82
320 46 0.16
ACGTcount: A:0.29, C:0.16, G:0.14, T:0.41
Consensus pattern (320 bp):
TTTTGAAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCCAGG
TTCTTGGACGAACTTTTGAACTTGTCAAACTTTTACAAATTATTTTATAACTTCGGTTCCTCAAA
ACATTCAAGACGATCCATTCCTTCCTATAATTTTCTGAACATTCCATGCTCAAGAAATCGCATCA
TTTCATCTAAATAGTTTTCCATTTTGTAAACAAGTTTTGGTTTATGAAATAAAAACCTATTTACG
TGAGAATAGTTTATCTCTTGATTCTAGGAAGAACTTACAAACTTGTCAAACTTTTACGCG
Found at i:33041199 original size:216 final size:215
Alignment explanation
Indices: 33040810--33041511 Score: 761
Period size: 216 Copynumber: 3.3 Consensus size: 215
33040800 CTTTTACGCG
* * **
33040810 TTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCCAGG
1 TTTTGTAAACAAGTTTTGGTCTTTGAAATAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGG
*** * * *
33040875 TTCTTGGACGAACTTTTGAACTTGTTAAACTTTTATGAGTTATTTTATAACTTCGGTTCCTCAAA
66 TTCTTGGACGAACTTACAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTC-AA
* * * * *
33040940 ACATTCAAGACGATCCATTCCTTCTATCAATTTTTCGAACATTCCATGCTCAAGAAATCGCATCA
130 ATATTCAAGACGATCCATTCATTCAATCAATTTTTCAAACATTCCATGCTCAAGAAATAGCATCA
33041005 TTTCAT-TGAAATAGTTTGTCA
195 TTTCATCT-AAATAGTTTGTCA
* * *
33041026 TTTTGTAAACGAGTTTTGGTCTTTGAAATAAAAACTTATTTACGTGAGAATAGTTTCTCTCTTGG
1 TTTTGTAAACAAGTTTTGGTCTTTGAAATAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGG
* *
33041091 TTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTCAGA
66 TTCTTGGACGAACTTACAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTCA-A
* *
33041156 ATATTCAAGATGATCCATTCATTCAAGT-AA-TTTTCTAAACATTCCATGCTCGAGAAATAGCAT
130 ATATTCAAGACGATCCATTCATTCAA-TCAATTTTTC-AAACATTCCATGCTCAAGAAATAGCAT
**
33041219 CATTTGGTCTAAATAGTTTGTCA
193 CATTTCATCTAAATAGTTTGTCA
* * * *
33041242 TTTTGTAAACAAGTTTTAGTCTTT-AAATTAAAAACATATATACATGAGAATTGTTTCTATCTTG
1 TTTTGTAAACAAGTTTTGGTCTTTGAAA-TAAAAACTTATATACGTGAGAATTGTTTCTCTCTTG
* * * * *
33041306 GTTCGTT-GACAAATTTACAAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTTGGTTCCTTA
65 GTTC-TTGGACGAACTTACAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTCA
* * * * * * * * * ** *
33041370 AAGTATTAAAGACGATCCATTCCTCCGAGCAATATTCCGACCATTCCATGCTCGCGAAATCGCAT
129 AA-TATTCAAGACGATCCATTCATTCAATCAATTTTTCAAACATTCCATGCTCAAGAAATAGCAT
** *
33041435 -ATTTTGGTCTAAATAGTTTGTTA
193 CA-TTTCATCTAAATAGTTTGTCA
** * * * * * *
33041458 TTTCATAAATAAGTTTTGGTCCTT-AAATTGAAATCCTATTTACGTGAGAATTGT
1 TTTTGTAAACAAGTTTTGGTCTTTGAAA-TAAAAACTTATATACGTGAGAATTGT
33041512 GTGATGTGAG
Statistics
Matches: 416, Mismatches: 60, Indels: 20
0.84 0.12 0.04
Matches are distributed among these distances:
215 12 0.03
216 397 0.95
217 7 0.02
ACGTcount: A:0.30, C:0.17, G:0.14, T:0.40
Consensus pattern (215 bp):
TTTTGTAAACAAGTTTTGGTCTTTGAAATAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGG
TTCTTGGACGAACTTACAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTCAAA
TATTCAAGACGATCCATTCATTCAATCAATTTTTCAAACATTCCATGCTCAAGAAATAGCATCAT
TTCATCTAAATAGTTTGTCA
Found at i:33041292 original size:535 final size:536
Alignment explanation
Indices: 33040275--33041342 Score: 1500
Period size: 535 Copynumber: 2.0 Consensus size: 536
33040265 TAGTTTGTCA
* **
33040275 TTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGTGAGAATTATGTCTCTCTTGG
1 TTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTATGTCTCTCCAGG
* * * * *
33040340 TTCTTGGACGAACTTCCAAATTTGTCAAACTTTTGCGAGTTCTTTTATAACTTCTATTCCTTAAA
66 TTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACGAGTTATTTTATAACTTCGATTCCTCAAA
* * ***
33040405 ACATTCAAGACAATCCATTCCATCTAGCCATTTTTTGAACATTCCATGCTTGGGAAATCGCATCA
131 ACATTCAAGACAATCCATTCCATCTAGCAATTTTTCGAACATTCCATGCTCAAGAAATCGCATCA
*
33040470 TTTCATTGAAATAGTTTGTCATTTTGAAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACG
196 TTTCATTGAAATAGTTTGTCATTTTGAAAACAAGTTTTGGTCTTTGAAATAAAAACTTATATACG
* * *** *
33040535 TGATAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTTGAATTTGTCAAACTTTTACAAATTCTT
261 TGAGAATAGTTTCTCTCTTGGTTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACAAATTCTT
* * * * ** * *
33040600 TTATAACTTTGGTTCCTTAAAACATTCAAGATGATCCATTCCTTCCTGTAATTTTCTGAGCATTC
326 TTATAACTTCGATTCCTCAAAACATTCAAGATGATCCATTCATTCAAGTAATTTTCTAAACATTC
* * *
33040665 CATGCTCAGGAAATTGTATCATTTGGTCTAAATAGTTTTCCATTTTGTAAACAAGTTTTGGTTTA
391 CATGCTCAGGAAATAGCATCATTTGGTCTAAATAGTTTTCCATTTTGTAAACAAGTTTTAGTTTA
* * * * ** * *
33040730 TGAATTAAAATCCTATTTATGTGAGAATT-TTTATCTCTTGATTC-TAGGA-AGAACTTACGAAC
456 TAAATTAAAAACATATATACATGAGAATTGTTTATATCTTGATTCGT-GGACA-AACTTACAAAC
33040792 TTGTCAAACTTTTACGCG
519 TTGTCAAACTTTTACGCG
* *
33040810 TTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCCAGG
1 TTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTATGTCTCTCCAGG
*** * * *
33040875 TTCTTGGACGAACTTTTGAACTTGTTAAACTTTTATGAGTTATTTTATAACTTCGGTTCCTCAAA
66 TTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACGAGTTATTTTATAACTTCGATTCCTCAAA
* * *
33040940 ACATTCAAGACGATCCATTCCTTCTATCAATTTTTCGAACATTCCATGCTCAAGAAATCGCATCA
131 ACATTCAAGACAATCCATTCCATCTAGCAATTTTTCGAACATTCCATGCTCAAGAAATCGCATCA
* * *
33041005 TTTCATTGAAATAGTTTGTCATTTTGTAAACGAGTTTTGGTCTTTGAAATAAAAACTTATTTACG
196 TTTCATTGAAATAGTTTGTCATTTTGAAAACAAGTTTTGGTCTTTGAAATAAAAACTTATATACG
* *
33041070 TGAGAATAGTTTCTCTCTTGGTTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTT
261 TGAGAATAGTTTCTCTCTTGGTTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACAAATTCTT
* *
33041135 TTATAACTTCGATTCCTCAGAATATTCAAGATGATCCATTCATTCAAGTAATTTTCTAAACATTC
326 TTATAACTTCGATTCCTCAAAACATTCAAGATGATCCATTCATTCAAGTAATTTTCTAAACATTC
33041200 CATGCTC-GAGAAATAGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTAGTC
391 CATGCTCAG-GAAATAGCATCATTTGGTCTAAATAGTTT-TCCATTTTGTAAACAAGTTTTAGT-
* * * *
33041263 TT-TAAATTAAAAACATATATACATGAGAATTGTTTCTATCTTGGTTCGTTGACAAATTTACAAA
453 TTATAAATTAAAAACATATATACATGAGAATTGTTTATATCTTGATTCGTGGACAAACTTACAAA
33041327 CTTGTCAAACTTTTAC
518 CTTGTCAAACTTTTAC
33041343 AAGTTCTTTT
Statistics
Matches: 466, Mismatches: 61, Indels: 11
0.87 0.11 0.02
Matches are distributed among these distances:
534 1 0.00
535 422 0.91
536 41 0.09
537 2 0.00
ACGTcount: A:0.29, C:0.16, G:0.13, T:0.41
Consensus pattern (536 bp):
TTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTATGTCTCTCCAGG
TTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACGAGTTATTTTATAACTTCGATTCCTCAAA
ACATTCAAGACAATCCATTCCATCTAGCAATTTTTCGAACATTCCATGCTCAAGAAATCGCATCA
TTTCATTGAAATAGTTTGTCATTTTGAAAACAAGTTTTGGTCTTTGAAATAAAAACTTATATACG
TGAGAATAGTTTCTCTCTTGGTTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACAAATTCTT
TTATAACTTCGATTCCTCAAAACATTCAAGATGATCCATTCATTCAAGTAATTTTCTAAACATTC
CATGCTCAGGAAATAGCATCATTTGGTCTAAATAGTTTTCCATTTTGTAAACAAGTTTTAGTTTA
TAAATTAAAAACATATATACATGAGAATTGTTTATATCTTGATTCGTGGACAAACTTACAAACTT
GTCAAACTTTTACGCG
Found at i:33041885 original size:48 final size:48
Alignment explanation
Indices: 33041814--33041927 Score: 147
Period size: 48 Copynumber: 2.3 Consensus size: 48
33041804 TATTTATGCT
* * *
33041814 TCATTAAGTGTTTTTTTTTTGTTAAATGCATCTTTGTTTAATAATCTGCA
1 TCATTAAGTG--TTTTGTTTGTTAAATGCAACTTTGTTTAATAATCAGCA
* *
33041864 TCATTAAGTGTTTTGTTTGTTAAATTCAACTTTGTTTAGTAATCAGCA
1 TCATTAAGTGTTTTGTTTGTTAAATGCAACTTTGTTTAATAATCAGCA
* *
33041912 TTATTAATTGTTTTGT
1 TCATTAAGTGTTTTGT
33041928 GATATGGCCA
Statistics
Matches: 57, Mismatches: 7, Indels: 2
0.86 0.11 0.03
Matches are distributed among these distances:
48 47 0.82
50 10 0.18
ACGTcount: A:0.25, C:0.09, G:0.13, T:0.54
Consensus pattern (48 bp):
TCATTAAGTGTTTTGTTTGTTAAATGCAACTTTGTTTAATAATCAGCA
Found at i:33042331 original size:39 final size:39
Alignment explanation
Indices: 33042288--33042416 Score: 222
Period size: 39 Copynumber: 3.3 Consensus size: 39
33042278 TTAAATAGGG
* * *
33042288 TTTTAATGTGTCTTAGTTTGATACATATTTAAGAGTTGT
1 TTTTAATGTGTCCTAGTTTAATACATATTTAATAGTTGT
33042327 TTTTAATGTGTCCTAGTTTAATACATATTTAATAGTTGT
1 TTTTAATGTGTCCTAGTTTAATACATATTTAATAGTTGT
*
33042366 TTTTAATGAGTCCTAGTTTAATACATATTTAATAGTTGT
1 TTTTAATGTGTCCTAGTTTAATACATATTTAATAGTTGT
33042405 TTTTAATGTGTC
1 TTTTAATGTGTC
33042417 TAGGATTGAG
Statistics
Matches: 85, Mismatches: 5, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
39 85 1.00
ACGTcount: A:0.27, C:0.07, G:0.15, T:0.51
Consensus pattern (39 bp):
TTTTAATGTGTCCTAGTTTAATACATATTTAATAGTTGT
Found at i:33042445 original size:78 final size:78
Alignment explanation
Indices: 33042288--33042436 Score: 203
Period size: 78 Copynumber: 1.9 Consensus size: 78
33042278 TTAAATAGGG
* * * * *
33042288 TTTTAATGTGTCTTAGTTTGATACATATTTAAGAGTTGTTTTTAATGTGTCCTAGTTTAATACAT
1 TTTTAATGAGTCCTAGTTTAATACATATTTAAGAGTTGTTTTTAATGTGTCCTAGATTAAGACAT
*
33042353 ATTTAATAGTTGT
66 AATTAATAGTTGT
* *
33042366 TTTTAATGAGTCCTAGTTTAATACATATTTAATAGTTGTTTTTAATGTGT-CTAGGATTGAGACA
1 TTTTAATGAGTCCTAGTTTAATACATATTTAAGAGTTGTTTTTAATGTGTCCTA-GATTAAGACA
33042430 -AATTAAT
65 TAATTAAT
33042437 TTCATGTTTG
Statistics
Matches: 62, Mismatches: 8, Indels: 3
0.85 0.11 0.04
Matches are distributed among these distances:
77 9 0.15
78 53 0.85
ACGTcount: A:0.30, C:0.07, G:0.15, T:0.48
Consensus pattern (78 bp):
TTTTAATGAGTCCTAGTTTAATACATATTTAAGAGTTGTTTTTAATGTGTCCTAGATTAAGACAT
AATTAATAGTTGT
Found at i:33042507 original size:32 final size:32
Alignment explanation
Indices: 33042471--33042565 Score: 163
Period size: 32 Copynumber: 3.0 Consensus size: 32
33042461 AACTGAAATT
33042471 AATTAGCTGATTAATGTGTTTCAGGTACATGC
1 AATTAGCTGATTAATGTGTTTCAGGTACATGC
*
33042503 AATTAGCTGATTAATGTGTTTCAGGTACATCC
1 AATTAGCTGATTAATGTGTTTCAGGTACATGC
* *
33042535 AATTAGCTGATTAATATATTTCAGGTACATG
1 AATTAGCTGATTAATGTGTTTCAGGTACATG
33042566 TATGGATGGC
Statistics
Matches: 59, Mismatches: 4, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
32 59 1.00
ACGTcount: A:0.31, C:0.13, G:0.19, T:0.38
Consensus pattern (32 bp):
AATTAGCTGATTAATGTGTTTCAGGTACATGC
Found at i:33044047 original size:80 final size:80
Alignment explanation
Indices: 33043958--33044107 Score: 246
Period size: 80 Copynumber: 1.9 Consensus size: 80
33043948 CATTAAGGAG
* * *
33043958 AAATGCCATGCCTTTTCAGCTACATCAGATCCTAATGAAGAGACAAGACTCATTGGCTTTCCTAC
1 AAATGCCATGCCTTTTCAACTACATCAGATCCTAATGAAGAGACAAGACTCATTAGCTTCCCTAC
33044023 AAGAGCTCAAAACGA
66 AAGAGCTCAAAACGA
* * *
33044038 AAATGCCATGCCTTTTTAACTACATTAGATCCTAATGAAGAGACATGACTCATTAGCTTCCCTAC
1 AAATGCCATGCCTTTTCAACTACATCAGATCCTAATGAAGAGACAAGACTCATTAGCTTCCCTAC
33044103 AAGAG
66 AAGAG
33044108 TTAAAATGAA
Statistics
Matches: 64, Mismatches: 6, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
80 64 1.00
ACGTcount: A:0.35, C:0.24, G:0.15, T:0.26
Consensus pattern (80 bp):
AAATGCCATGCCTTTTCAACTACATCAGATCCTAATGAAGAGACAAGACTCATTAGCTTCCCTAC
AAGAGCTCAAAACGA
Found at i:33045358 original size:216 final size:215
Alignment explanation
Indices: 33044580--33049031 Score: 4977
Period size: 216 Copynumber: 20.7 Consensus size: 215
33044570 TATCATTATG
* * * * * * * * *
33044580 TCTCTCTTGGTTCTAGGATGAACTTTCAAACTAGTCAAACTTCTACGAGTTCTTTTACAGCATTG
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAAC-TTC
** * *
33044645 GTTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAGCAAATTTTCGAACATTCCATGCTCGAGA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* *
33044710 AATCGCTTCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTTTTCTTTGAATTAAAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAA
33044775 CTTATATACGTGAGAATTGTT
195 CTTATATACGTGAGAATTGTT
* * *
33044796 TCTCTCTTGGCTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTA
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAAC-TTC
* * *
33044861 GTTCCTTAAAACATTCAAGACGATCC-TTCCTTCTAGTAAGTTTTCGAACATTCCATGCTCGGGA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* * * *
33044925 AATTGCATCATTTGGTCTAAGTACTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAA
* * * *
33044988 ATCCTATTTACGTGAG-ACT-TT
193 AACTTATATACGTGAGAATTGTT
* * * * * *
33045009 TCATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAGCTTTTACGCGTTCTTTTATAACTTC
1 TC-TCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* ** * * * * * *
33045074 GATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTGGGG
65 G-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGG
33045139 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAA
129 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAA
*
33045204 ACTTATATACGTGAGAATTATT
194 ACTTATATACGTGAGAATTGTT
* * *
33045226 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAATTTTTATGAGTTCTTTTACAACTTCA
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-
** * * *
33045291 GTTCCTTAAAACATTCAAGACGATTTATTCCTTCCAGCAATTTTTCGAACATTCGAAGCTTGGGA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
** * * * ** * *
33045356 AATCGCATCATTTCATCGAAATAGTTTGACATTTTGTAAATAAGTTTTGGACCTTGAATTACAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAA
* * * *
33045421 TTTATTTATGTGAGAATAGTT
195 CTTATATACGTGAGAATTGTT
* * * * * * *
33045442 TCTCTCCTGTTTCTTGGAC-AATCTTCCAAAGTAGTCAAAGTTTTATGAGTTCTTTTATAACTTC
1 TCTCTCTTGGTTCTTGGACGAA-CTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* *
33045506 GGTTCCTTAAAACATTCAAGACTATCCATTCCTTCCAGCAATTTTTTGAACATTCCATGCTCGGG
65 -GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGG
* * *
33045571 AAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TATGAATTAA
129 AAATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAA
* * *
33045634 AATCCTATTTACGTGAGAATT-TT
192 AAACTTATATACGTGAGAATTGTT
* * * * *
33045657 TAC-CCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTC
1 T-CTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* ** ** * * * * *
33045721 GATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAATAATGTTCCTAAGATTCCATCCTCGGG
65 G-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGG
*
33045786 AAATCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAA
129 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAA
*
33045851 ACTTATATATGTGAGAATTGTT
194 ACTTATATACGTGAGAATTGTT
* * * **
33045873 TCTCTCTTGGTTCCTGAATGAACTTTAGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCA
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-
* * * **
33045938 GTTCCTTAAAACATTCAAGACAATCTATTCCTTCCAGCAATTTCTCGAACATTCCATGCTCGACA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* * *
33046003 AATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAGAAGTTTTGGTCTTTGAATTAAAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAA
33046068 CTTATATA-GCTGAGAATT-TT
195 CTTATATACG-TGAGAATTGTT
* * ** *
33046088 TCTC-GTTAGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTAAAAATTCTTTTATAACTTCG
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
*
33046152 ATTCCTTAAACCATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
66 -TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* * * * *
33046217 AATTGCATCATTTGGTCTGAGTAGTTT-TCCATTTTGTAAACAGGTTTTGGTT-TGTGAATTAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAA
* * * *
33046280 ATCCTATTTACGTGATAATT-TT
193 AACTTATATACGTGAGAATTGTT
* * * * * * * *
33046302 TATCCCTTGATTCTAT-GACGAGCTTACAAACTTGTCAAACATTTACGCA-TTATTTTATAACTT
1 TCTCTCTTGGTTCT-TGGACGAACTTCCGAACTTGTCAAACTTTTACG-AGTTCTTTTATAACTT
* ** * ** * * * *
33046365 CGATTCCTTATAGTATTCAAGACGATCCATTTCTTCCAAAAATGTTCCAAACATTCCATCCTCGG
64 CG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGG
* * *
33046430 TAAATCGCATTATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTGGTTCTTTGAATTAAA
128 GAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAA
33046495 AACTTATATACGTGAGAATTGTT
193 AACTTATATACGTGAGAATTGTT
* * * *
33046518 TCTCTCTGGGTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTG
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAAC-TTC
** *
33046583 GTTCCTTAAAACATTCAAGATAATCCATTCCTTCTAGCAATTTTTCGAACATTCCATGCTCGGGA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* ** * * * *
33046648 AATCGAATCATTTCATCGAAATAGTTTCTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAGAA
130 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAA
* * * *
33046713 CTTATTTAAGTGAGAGTCGTT
195 CTTATATACGTGAGAATTGTT
* * * *
33046734 TCTCTCTTGTTTCATGGACGAACTTCCAAACTTGTCAAACTGTTACGAGTTCTTTTATAACTTCG
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-
* * * * * * *
33046799 GTTCCTTAAAATATTCAAGACAATGCAATCCTTCTAGCAA-TTTTCTAAACATTCCATGCTCTGG
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTCCATGCTCGGG
* * * * *
33046863 AAATTGCATCATTTGGTCTAAGTACCTTT-CCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAA
129 AAATCGCATCATTTGGTCTAAATA-GTTTGTCATTTTGTAAACAAGTTTT-GTTCTTTGAATTAA
* * *
33046926 AATCCTATTTACGTGAGAATT-TT
192 AAACTTATATACGTGAGAATTGTT
* * * * * * * *
33046949 TATCCCTTGATTCTAGGACAAACTTACGAACTTGTCAAACTTTTACGCGTTCTTATATAACTTCG
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
* ** * * * * * *
33047014 ATTCCTTATAGTATTTCAAGACGATCCATTCGTTCCAACAATGTTCCAAACATTCCATCCTCGGG
66 -TTCCTTAAAACA-TTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGG
* *
33047079 AAATCTCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTATTGTTCTTTGAATTAAAA
129 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAA
33047144 ACTTATATACGTGAGAATTGTT
194 ACTTATATACGTGAGAATTGTT
* * *
33047166 TCTCTTTTGGTTCTTGGACGAACTGT-CAAACTTGTCAAACTTTTACGAATTCTTTTATAACTTC
1 TCTCTCTTGGTTCTTGGACGAACT-TCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* *
33047230 AGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCACCAATTTTTC-AAGCATTCCATGCTCGG
65 -GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAA-CATTCCATGCTCGG
* * * * * * *
33047294 GAAATTGTATCATTAGGTCTAAGTTGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTAAATTA
128 GAAATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTA
* * * *
33047357 AAATCCTATTTATGTGAGAATT-TT
191 AAAACTTATATACGTGAGAATTGTT
* * * * * *
33047381 TATCCCTTGATTCTAGGACAAACTTACGAACTTGTCAAACTTTTAC-ACGTTCTTTTATAACTTC
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGA-GTTCTTTTATAACTTC
* * ** * * * * * * *
33047445 TATTCCTTATAGTATTCAAGATGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGAG
65 -GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGG
* * *
33047510 AAATCGCATCATTTGGTCCAAATGGTTTTTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAA
129 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAA
* * *
33047575 TCATATATACTTGAGAATTGTT
194 ACTTATATACGTGAGAATTGTT
* * ** *
33047597 TCTCTCTGGGTTCTTGGATGAACTTTTGAACTTGTCAATCTTTTACGAGTTCTTTTATAACTTCG
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
* * * *
33047662 ATTCCTTAAAACATTCAAGACGATCAATTCCTTCTAGCAATTTTCCGAACATTCCATGCTCAGGA
66 -TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
** * * * *
33047727 AATCGCATCATTTCATCGAAATAGTTTGTCATCTTGTAAACAAGTTTTGGTCTTTGAATTACAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAA
* * *
33047792 CTTATTTATGTGAGAATAGTT
195 CTTATATACGTGAGAATTGTT
* * * * *
33047813 TCTTTGTTGTTTCTTGGACGAACTTCCAAACTTGCCAAACTTTTACGAGTTCTTTTATAACTTCA
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-
* * *
33047878 GTTCCTTAAAACATTCAAGATGATCCATTCCTTCCAGTAATTTTTCTAACATTCCATGCTCGGGA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* * * * * *
33047943 AATTGCATCATTTGCTCCAAGTAGTTT-TCCATTTTTTAAACAAGTTTTGGTT-TGTGAATTAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAA
* * *
33048006 ATCCTATTTACGTGAGAATT-TT
193 AACTTATATACGTGAGAATTGTT
* * ** * ** * * *
33048028 TATCCCTTAATTCTAGGACGAACTTATGAACTTGTCAAACTTTTACGCGTTCTTTGATAACCTCG
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
* *** * * * * * * *
33048093 TTTCCTTATAGTTTTCAAGACGATCAATTTCTTCCAACAATGTTCCAAACATTCCATCCTCGGGA
66 -TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* *
33048158 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAAGTAAAAT
130 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAA
33048223 CTTATATACGTGAGAATTGTT
195 CTTATATACGTGAGAATTGTT
* *
33048244 TCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCATTTATAACTTCA
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-
* * * * **
33048309 GTTCCTTAAAATATTTAACACGATCCATTCCTTCCAGCAATTTCTCGAACATTCCATGCTCGACA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
*
33048374 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAA
*
33048439 CTTATATAGGTGAGAATTGTT
195 CTTATATACGTGAGAATTGTT
* * * *
33048460 TCTCTCTTGGTTCTTAGATGAACTTCAGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-
*
33048525 GTTCCTT-AAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGAGA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* * * * *
33048589 AATTGTATCACTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TTTTAATTAAA
130 AATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAA
* * * *
33048652 ATCCTATTTACTTGAGAATT-TT
193 AACTTATATACGTGAGAATTGTT
* ** * ** * * *
33048674 TATC-CTTTAATTCTAGGACGAACTTATGGACTTGTCAAACTTTTAC-ACATTCTTTTATAAGTT
1 TCTCTC-TTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGA-GTTCTTTTATAACTT
**** * * * * *
33048737 CGATTCCTTATTGTATTCAAGACGATCCATTTCTTCCAACAATGTTCCAAACATTCCAT-CGTCG
64 CG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGC-TCG
* *
33048801 GGAAATCGCATCATTTTGTCTAAATAGTTTGTCATTTTGTAAAAAAGTTTTGTTCTTTGAATTAA
127 GGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAA
*
33048866 AAACTTATATACGTGAGAGTTGTT
192 AAACTTATATACGTGAGAATTGTT
* * * * *
33048890 TCTCTCTGGGTTCTTGGACGTACTTCTGAACTTGTCAAACTTTT-CGAGTTCATTTATAACTTGA
1 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTT-C
* * * * * *
33048954 GTTCCTTTAGACATTCAAGACGATCCATTCCTTCTAGCAATTTTCCAAACATTTCATGCTCGGGA
65 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
*
33049019 AATCACATCATTT
130 AATCGCATCATTT
33049032 CATCGAAATT
Statistics
Matches: 3540, Mismatches: 616, Indels: 161
0.82 0.14 0.04
Matches are distributed among these distances:
213 12 0.00
214 335 0.09
215 1276 0.36
216 1825 0.52
217 90 0.03
218 2 0.00
ACGTcount: A:0.28, C:0.19, G:0.14, T:0.39
Consensus pattern (215 bp):
TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGAA
ATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAAC
TTATATACGTGAGAATTGTT
Found at i:33045813 original size:647 final size:645
Alignment explanation
Indices: 33044580--33049031 Score: 5429
Period size: 647 Copynumber: 6.9 Consensus size: 645
33044570 TATCATTATG
* * * * * *
33044580 TCTCTCTTGGTTCTAGGATGAACTTTCAAACTAGTCAAACTTCTACGAGTTCTTTTACAGCATT-
1 TCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAAC-TTC
* ** * *
33044644 GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAGCAAATTTTCGAACATTCCATGCTCGAG
65 AGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGG
* * **
33044709 AAATCGCTTCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTTTTCTTTGAATTAAAA
130 AAATCGCATCATTTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTTTTGGTCTTTGAATT-AAA
* * * * ** *
33044774 ACTTATATACGTGAGAATTGTTTCTCTCTTGGCTCTTGGACGAACTTCCAAACTTGTCAAACTTT
194 ATTTATTTATGTGAGAA-TGTTTCTCTCCTGTTTCTTGGACGAACTTCCGAACTTGTCAAACTTT
* * * *
33044839 TACGAGTTCTTTTATAACTT-TAGTTCCTTAAAACATTCAAGACGATCC-TTCCTTCTAGTAAGT
258 TACGAGTTCTTTTATAACTTCGA-TTCCTTAAAATATTCAAGACGATCCATTCCTTCCAGCAA-T
* *
33044902 TTT-CGAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTACTTTTCCATTTTGTAAAC
321 TTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAAC
* * *
33044966 AAGTTTTGGTTTGTGAATTAAAATCCTATTTACGTGAGACTTTTCATCCCTTGATTCTAGGACGA
386 AAGTTTTGGTTTGTGAATTAAAATCCTATTTACGTGAGAATTTTTACCCCTTGATTCTAGGACGA
*
33045031 ACTTACGAACTTGTCAAGCTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGAC
451 ACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGAC
*
33045096 GATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTGGGGAAATCGCATCATTTGGTCTAAA
516 GATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGGTCTAAA
*
33045161 TAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTATT
581 TAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTT
* * * * *
33045226 TCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAATTTTTATGAGTTCTTTTACAACTTCA
1 TCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCA
** * * *
33045291 GTTCCTTAAAACATTCAAGACGATTTATTCCTTCCAGCAATTTTTCGAACATTCGAAGCTTGGGA
66 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
** * * * * *
33045356 AATCGCATCATTTCATCGAAATAGTTTGACATTTTGTAAATAAGTTTTGGACCTTGAATTACAAA
131 AATCGCATCATTTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTTTTGGTCTTTGAATTA-AAA
* * * *
33045421 TTTATTTATGTGAGAATAGTTTCTCTCCTGTTTCTTGGAC-AATCTTCCAAAGTAGTCAAAGTTT
195 TTTATTTATGTGAGAAT-GTTTCTCTCCTGTTTCTTGGACGAA-CTTCCGAACTTGTCAAACTTT
* * * *
33045485 TATGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACTATCCATTCCTTCCAGCAATTT
258 TACGAGTTCTTTTATAACTTCGATTCCTTAAAATATTCAAGACGATCCATTCCTTCCAGCAATTT
***
33045550 TTTGAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAACAA
323 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAACAA
*
33045615 GTTTTGGTTTATGAATTAAAATCCTATTTACGTGAGAATTTTTACCCCTTGATTCTAGGACGAAC
388 GTTTTGGTTTGTGAATTAAAATCCTATTTACGTGAGAATTTTTACCCCTTGATTCTAGGACGAAC
33045680 TTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGACGA
453 TTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGACGA
* * * *
33045745 TCCATTCCTTCCAATAATGTTCCTAAGATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATA
518 TCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGGTCTAAATA
*
33045810 GTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGTGAGAATTGTT
583 GTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTT
* * *
33045873 TCTCTCTTGGTTCCTGAATGAACTT-TAGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
1 TCTCTCTTGGTTCTTGGATGAACTTCCA-AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* * * **
33045937 AGTTCCTTAAAACATTCAAGACAATCTATTCCTTCCAGCAATTTCTCGAACATTCCATGCTCGAC
65 AGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGG
* * *
33046002 AAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAGAAGTTTTGGTCTTTGAATTAAAA
130 AAATCGCATCATTTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTTTTGGTCTTTGAATT-AAA
* * *
33046067 ACTTATATA-GCTGAGAAT-TTT-TCTCGT-TAGTTCTTGGACGAACTTCCGAACTTGTCAAACT
194 ATTTATTTATG-TGAGAATGTTTCTCTCCTGT--TTCTTGGACGAACTTCCGAACTTGTCAAACT
** * **
33046128 TTTAAAAATTCTTTTATAACTTCGATTCCTTAAACCATTCAAGACGATCCATTCCTTCCAGCAAT
256 TTTACGAGTTCTTTTATAACTTCGATTCCTTAAAATATTCAAGACGATCCATTCCTTCCAGCAAT
* * *
33046193 TTTTCGAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTGAGTAGTTTTCCATTTTGTAAAC
321 TTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAAC
* * * *
33046258 AGGTTTTGGTTTGTGAATTAAAATCCTATTTACGTGATAATTTTTATCCCTTGATTCTATGACGA
386 AAGTTTTGGTTTGTGAATTAAAATCCTATTTACGTGAGAATTTTTACCCCTTGATTCTAGGACGA
* * * * *
33046323 GCTTACAAACTTGTCAAACATTTACGCATTATTTTATAACTTCGATTCCTTATAGTATTCAAGAC
451 ACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGAC
* * * *
33046388 GATCCATTTCTTCCAAAAATGTTCCAAACATTCCATCCTCGGTAAATCGCATTATTTGGTCTAAA
516 GATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGGTCTAAA
*
33046453 TAGTTTGTCATTTTGTAAACAAGTTTGGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTT
581 TAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTT
* **
33046518 TCTCTCTGGGTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTG
1 TCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCA
** *
33046583 GTTCCTTAAAACATTCAAGATAATCCATTCCTTCTAGCAATTTTTCGAACATTCCATGCTCGGGA
66 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* ** *
33046648 AATCGAATCATTTCATCGAAATAGTTT-CTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAGA
131 AATCGCATCATTTGGTCTAAATAGTTTGC-CATTTTGTAAACAAGTTTTGGTCTTTGAATTAA-A
* * * * * * *
33046712 ACTTATTTAAGTGAGAGTCGTTTCTCTCTTGTTTCATGGACGAACTTCCAAACTTGTCAAACTGT
194 ATTTATTTATGTGAGAAT-GTTTCTCTCCTGTTTCTTGGACGAACTTCCGAACTTGTCAAACTTT
* * * * *
33046777 TACGAGTTCTTTTATAACTTCGGTTCCTTAAAATATTCAAGACAATGCAATCCTTCTAGCAATTT
258 TACGAGTTCTTTTATAACTTCGATTCCTTAAAATATTCAAGACGATCCATTCCTTCCAGCAATTT
* * **
33046842 TCTAAACATTCCATGCTCTGGAAATTGCATCATTTGGTCTAAGTACCTTTCCATTTTGTAAACAA
323 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAACAA
* *
33046907 GTTTTGGTTTGTGAATTAAAATCCTATTTACGTGAGAATTTTTATCCCTTGATTCTAGGACAAAC
388 GTTTTGGTTTGTGAATTAAAATCCTATTTACGTGAGAATTTTTACCCCTTGATTCTAGGACGAAC
*
33046972 TTACGAACTTGTCAAACTTTTACGCGTTCTTATATAACTTCGATTCCTTATAGTATTTCAAGACG
453 TTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTA-TTCAAGACG
* *
33047037 ATCCATTCGTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCTCATCATTTGGTCTAAAT
517 ATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGGTCTAAAT
*
33047102 AGTTTGTCATTTTGTAAACAAGTATTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTT
582 AGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTT
* * *
33047166 TCTCTTTTGGTTCTTGGACGAACTGT-CAAACTTGTCAAACTTTTACGAATTCTTTTATAACTTC
1 TCTCTCTTGGTTCTTGGATGAACT-TCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* *
33047230 AGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCACCAATTTTTC-AAGCATTCCATGCTCGG
65 AGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAA-CATTCCATGCTCGG
* * * * * * *
33047294 GAAATTGTATCATTAGGTCTAAGTTGTTTTCCATTTTGTAAACAAGTTTTGGT-TTGTAAATTAA
129 GAAATCGCATCATTTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTTTTGGTCTT-TGAATTAA
* * * * * * *
33047358 AATCCTATTTATGTGAGAATTTTTATC-CCTTGATTCTAGGACAAACTTACGAACTTGTCAAACT
193 AAT-TTATTTATGTGAGAATGTTTCTCTCC-TGTTTCTTGGACGAACTTCCGAACTTGTCAAACT
* * * * *
33047422 TTTAC-ACGTTCTTTTATAACTTCTATTCCTTATAGTATTCAAGATGATCCATTCCTTCCAACAA
256 TTTACGA-GTTCTTTTATAACTTCGATTCCTTAAAATATTCAAGACGATCCATTCCTTCCAGCAA
* * * * * * * *
33047486 TGTTCCAAACATTCCATCCTCGAGAAATCGCATCATTTGGTCCAAATGGTTTTTCATTTTGTAAA
320 TTTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAA
* * * * * * * *
33047551 CAAGTTTT-GTTCTTTGAATTAAAATCATATATACTTGAGAATTGTTT-CTCTCTGGGTTCTTGG
385 CAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACGTGAGAATT-TTTAC-CCCTTGATTCTAGG
* ** * * * **
33047614 ATGAACTTTTGAACTTGTCAATCTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCA
447 ACGAACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCA
* * * * * * * **
33047679 AGACGATCAATTCCTTCTAGCAATTTTCCGAACATTCCATGCTCAGGAAATCGCATCATTTCATC
512 AGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGGTC
* * * * * *
33047744 GAAATAGTTTGTCATCTTGTAAACAAGTTTTGGTCTTTGAATTACAAACTTATTTATGTGAGAAT
577 TAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAAT
*
33047809 AGTT
642 TGTT
* * * * *
33047813 TCTTTGTTGTTTCTTGGACGAACTTCCAAACTTGCCAAACTTTTACGAGTTCTTTTATAACTTCA
1 TCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCA
* * *
33047878 GTTCCTTAAAACATTCAAGATGATCCATTCCTTCCAGTAATTTTTCTAACATTCCATGCTCGGGA
66 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
* * * * * *
33047943 AATTGCATCATTTGCTCCAAGTAGTTTTCCATTTTTTAAACAAGTTTTGGT-TTGTGAATTAAAA
131 AATCGCATCATTTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAA
* * * * * **
33048007 TCCTATTTACGTGAGAATTTTTATC-CCT-TAATTCTAGGACGAACTTATGAACTTGTCAAACTT
195 T-TTATTTATGTGAGAATGTTTCTCTCCTGT--TTCTTGGACGAACTTCCGAACTTGTCAAACTT
* * * * * * * * * * *
33048070 TTACGCGTTCTTTGATAACCTCGTTTCCTTATAGTTTTCAAGACGATCAATTTCTTCCAACAATG
257 TTACGAGTTCTTTTATAACTTCGATTCCTTAAAATATTCAAGACGATCCATTCCTTCCAGCAATT
* * *
33048135 TTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAAC
322 TTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAAC
* * * * * * *
33048199 AAGTTTT-GTTCTTTGAAGTAAAATCTTATATACGTGAGAATTGTTT-CTCTCTTGGTTCTTGGA
386 AAGTTTTGGTT-TGTGAATTAAAATCCTATTTACGTGAGAATT-TTTAC-CCCTTGATTCTAGGA
* * * * * *
33048262 CGAACTTTCGAACTTGTCAAACTTTTACGAGTTCATTTATAACTTC-AGTTCCTTAAAATATTTA
448 CGAACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGA-TTCCTTATAGTATTCA
* * * * **
33048326 ACACGATCCATTCCTTCCAGCAAT-TTCTCGAACATTCCATGCTCGACAAATCGCATCATTTGGT
512 AGACGATCCATTCCTTCCAACAATGTTC-CAAACATTCCATCCTCGGGAAATCGCATCATTTGGT
* *
33048390 CTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAA
576 CTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAA
33048455 TTGTT
641 TTGTT
* *
33048460 TCTCTCTTGGTTCTTAGATGAACTT-CAGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTC
1 TCTCTCTTGGTTCTTGGATGAACTTCCA-AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* *
33048524 GGTTCCTT-AAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGAG
65 AGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGG
* * * * * * *
33048588 AAATTGTATCACTTGGTCTAAGTAGTTTTCCATTTTGTAAACAAGTTTTGGTTTTTTAATTAAAA
130 AAATCGCATCATTTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA
* * * * ** *
33048653 TCCTATTTACT-TGAGAAT-TTT-TATCCTTTAATTCTAGGACGAACTTATGGACTTGTCAAACT
195 T-TTATTTA-TGTGAGAATGTTTCTCTCCTGT--TTCTTGGACGAACTTCCGAACTTGTCAAACT
* * *** * *
33048715 TTTAC-ACATTCTTTTATAAGTTCGATTCCTTATTGTATTCAAGACGATCCATTTCTTCCAACAA
256 TTTACGA-GTTCTTTTATAACTTCGATTCCTTAAAATATTCAAGACGATCCATTCCTTCCAGCAA
* * * *
33048779 TGTTCCAAACATTCCAT-CGTCGGGAAATCGCATCATTTTGTCTAAATAGTTTGT-CATTTTGTA
320 TTTTCCAAACATTCCATGC-TCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTA
* * * * * * * * * *
33048842 AAAAAGTTTT-GTTCTTTGAATTAAAAACTTATATACGTGAGAGTTGTTT-CTCTCTGGGTTCTT
383 AACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACGTGAGAATT-TTTAC-CCCTTGATTCTA
* * * *
33048905 GGACGTACTT-CTGAACTTGTCAAACTTTT-CGAGTTCATTTATAACTT-GAGTTCCTT-TAGAC
445 GGACGAACTTAC-GAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGA-TTCCTTATAG-T
* * * * * *
33048966 ATTCAAGACGATCCATTCCTTCTAGCAATTTTCCAAACATTTCATGCTCGGGAAATCACATCATT
507 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATT
33049031 T
572 T
33049032 CATCGAAATT
Statistics
Matches: 3383, Mismatches: 372, Indels: 103
0.88 0.10 0.03
Matches are distributed among these distances:
643 1 0.00
644 9 0.00
645 667 0.20
646 634 0.19
647 1690 0.50
648 379 0.11
649 3 0.00
ACGTcount: A:0.28, C:0.19, G:0.14, T:0.39
Consensus pattern (645 bp):
TCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCA
GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGA
AATCGCATCATTTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAT
TTATTTATGTGAGAATGTTTCTCTCCTGTTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTAC
GAGTTCTTTTATAACTTCGATTCCTTAAAATATTCAAGACGATCCATTCCTTCCAGCAATTTTCC
AAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAACAAGTT
TTGGTTTGTGAATTAAAATCCTATTTACGTGAGAATTTTTACCCCTTGATTCTAGGACGAACTTA
CGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGACGATCC
ATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGGTCTAAATAGTT
TGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTT
Found at i:33045822 original size:431 final size:428
Alignment explanation
Indices: 33044580--33049031 Score: 4840
Period size: 431 Copynumber: 10.3 Consensus size: 428
33044570 TATCATTATG
* * * * * * *
33044580 TCTCTCTTGGTTCTAGGATGAACTTTCAAACTAGTCAAACTTCTACGAGTTCTTTTACAGCATT-
1 TCTCTCCTGGTTCTTGGA-CAAC-TTCAAACTTGTCAAACTTTTACGAGTTCTTTTATAAC-TTC
** * *
33044644 GGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAGCAAATTTT-CGAACATTCCATGCTCGA
63 GGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGC-AATTTTCCAAACATTCCATGCTCGG
* *
33044708 GAAATCGCTTCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-TTTCTTTGAATTAA
127 GAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TTTGAATTAA
* * ** *
33044772 AAACTTATATACGTGAGAATTGTTTCTCTCTTGGCTCTTGGACGAACTTCCAAACTTGTCAAACT
191 AATCTTATATACGTGAGAATT-TTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACT
* * *
33044837 TTTACGAGTTCTTTTATAACTT-TAGTTCCTTAAAACATTCAAGACGATCC-TTCCTTCTAGTAA
255 TTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAA
* * * *
33044900 -GTTTTCGAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTACTTT-TCCATTTTGTA
319 TG-TTCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTA
* * *
33044963 AACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACGTGAG-ACT-TT
382 AACAAGTTTTGGTCTT-TGAATTAAAA-CTTATATACGTGAGAATTGTT
* * * * *
33045009 TCATC-CCTTGATTCTAGGACGAACTTACGAACTTGTCAAGCTTTTACGCGTTCTTTTATAACTT
1 TC-TCTCC-TGGTTCTTGGAC-AACTT-CAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTT
* * ** * * * *
33045073 CGATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTGGG
62 CGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGG
33045138 GAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTTCTTTGAATTAA
127 GAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TTTGAATTAA
* * * *
33045202 AAACTTATATACGTGAGAATTATTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAATT
191 AATCTTATATACGTGAGAATT-TTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACT
* * **
33045267 TTTATGAGTTCTTTTACAACTTC-AGTTCCTTAAAACATTCAAGACGATTTATTCCTTCCAGCAA
255 TTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAA
* * * * * ** * *
33045331 TTTTTCGAACATTCGAAGCTTGGGAAATCGCATCATTTCATCGAAATAGTTTGACATTTTGTAAA
319 TGTTCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAA
* * * * * * *
33045396 TAAGTTTTGGACCTTGAATTACAAATTTATTTATGTGAGAATAGTT
384 CAAGTTTTGGTCTTTGAATTA-AAACTTATATACGTGAGAATTGTT
* * * * *
33045442 TCTCTCCTGTTTCTTGGACAATCTTCCAAAGTAGTCAAAGTTTTATGAGTTCTTTTATAACTTCG
1 TCTCTCCTGGTTCTTGGACAA-CTT-CAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
* ***
33045507 GTTCCTTAAAACATTCAAGACTATCCATTCCTTCCAGCAATTTTTTGAACATTCCATGCTCGGGA
64 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGA
* * *
33045572 AATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTATGAATTAAAA
129 AATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAA
* * * *
33045636 TCCTATTTACGTGAGAATTTTTAC-CCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTT
193 TCTTATATACGTGAGAATTTTT-CTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTT
* * ** **
33045700 TACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAATAATGT
257 TACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATGT
* * * *
33045765 TCCTAAGATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAA
322 TCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* *
33045830 GTTTTGTTCTTTGAATTAAAAACTTATATATGTGAGAATTGTT
387 GTTTTGGTCTTTGAATT-AAAACTTATATACGTGAGAATTGTT
* * * * * *
33045873 TCTCTCTTGGTTCCTGAATGAACTTTAGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCA
1 TCTCTCCTGGTTCTTGGA-CAACTTCA-AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
* * * **
33045938 GTTCCTTAAAACATTCAAGACAATCTATTCCTTCCAGCAA-TTTCTCGAACATTCCATGCTCGAC
64 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTC-CAAACATTCCATGCTCGGG
* * *
33046002 AAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAGAAGTTTTGGTCTTTGAATTAAAA
128 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAA
* *
33046067 ACTTATATA-GCTGAGAATTTTTCT-CGTT-AGTTCTTGGACGAACTTCCGAACTTGTCAAACTT
193 TCTTATATACG-TGAGAATTTTTCTCCCTTGA-TTCTTGGACGAACTTCCGAACTTGTCAAACTT
** * * *
33046129 TTAAAAATTCTTTTATAACTTCGATTCCTTAAACCATTCAAGACGATCCATTCCTTCCAGCAATT
256 TTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATG
* * * *
33046194 TTTCGAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTGAGTAGTTT-TCCATTTTGTAAAC
321 TTCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAAC
* * * *
33046258 AGGTTTTGGT-TTGTGAATTAAAATCCTATTTACGTGATAATT-TT
385 AAGTTTTGGTCTT-TGAATTAAAA-CTTATATACGTGAGAATTGTT
* * * * *
33046302 TATC-CCTTGATTCTAT-GACGAGCTTACAAACTTGTCAAACATTTACGCA-TTATTTTATAACT
1 TCTCTCC-TGGTTCT-TGGAC-AACTT-CAAACTTGTCAAACTTTTACG-AGTTCTTTTATAACT
* * ** * ** * *
33046364 TCGATTCCTTATAGTATTCAAGACGATCCATTTCTTCCAAAAATGTTCCAAACATTCCATCCTCG
61 TCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCG
* *
33046429 GTAAATCGCATTATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAG-TTTGGTTCTTTGAATTA
126 GGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TTTGAATTA
* * * * * *
33046493 AAAACTTATATACGTGAGAATTGTTTCTCTCTGGGTTCTTGGATGAACTTCCAAACTTGTCAAAC
190 AAATCTTATATACGTGAGAATT-TTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAAC
* * ** *
33046558 TTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAACATTCAAGATAATCCATTCCTTCTAGCAA
254 TTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAA
* * * ** * *
33046623 TTTTTCGAACATTCCATGCTCGGGAAATCGAATCATTTCATCGAAATAGTTTCTCATTTTGTAAA
319 TGTTCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAA
* * * *
33046688 CAAGTTTTGGTCTTTGAATTAAGAACTTATTTAAGTGAGAGTCGTT
384 CAAGTTTTGGTCTTTGAATTAA-AACTTATATACGTGAGAATTGTT
* * * *
33046734 TCTCTCTTGTTTCATGGACGAACTTCCAAACTTGTCAAACTGTTACGAGTTCTTTTATAACTTCG
1 TCTCTCCTGGTTCTTGGAC-AACTT-CAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
* * * * * * *
33046799 GTTCCTTAAAATATTCAAGACAATGCAATCCTTCTAGCAATTTTCTAAACATTCCATGCTCTGGA
64 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGA
* * * * *
33046864 AATTGCATCATTTGGTCTAAGTACCTTT-CCATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAA
129 AATCGCATCATTTGGTCTAAATA-GTTTGTCATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAA
* * * * * *
33046928 TCCTATTTACGTGAGAATTTTTATCCCTTGATTCTAGGACAAACTTACGAACTTGTCAAACTTTT
193 TCTTATATACGTGAGAATTTTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTT
* * * ** * *
33046993 ACGCGTTCTTATATAACTTCGATTCCTTATAGTATTTCAAGACGATCCATTCGTTCCAACAATGT
258 ACGAGTTCTTTTATAACTTCGATTCCTTAAAACA-TTCAAGACGATCCATTCCTTCCAGCAATGT
* * *
33047058 TCCAAACATTCCATCCTCGGGAAATCTCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
322 TCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* *
33047123 GTATTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTT
387 GTTTTGGTCTTTGAATT-AAAACTTATATACGTGAGAATTGTT
** * *
33047166 TCTCTTTTGGTTCTTGGACGAACTGTCAAACTTGTCAAACTTTTACGAATTCTTTTATAACTTCA
1 TCTCTCCTGGTTCTTGGAC-AACT-TCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
* * * *
33047231 GTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCACCAATTTTTCAAGCATTCCATGCTCGGGA
64 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGA
* * * * * * *
33047296 AATTGTATCATTAGGTCTAAGTTGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGTAAATTAAAA
129 AATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAA
* * * * * * *
33047360 TCCTATTTATGTGAGAATTTTTATCCCTTGATTCTAGGACAAACTTACGAACTTGTCAAACTTTT
193 TCTTATATACGTGAGAATTTTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTT
* * ** * *
33047425 AC-ACGTTCTTTTATAACTTCTATTCCTTATAGTATTCAAGATGATCCATTCCTTCCAACAATGT
258 ACGA-GTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATGT
* * * * * *
33047489 TCCAAACATTCCATCCTCGAGAAATCGCATCATTTGGTCCAAATGGTTTTTCATTTTGTAAACAA
322 TCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* * *
33047554 GTTTTGTTCTTTGAATTAAAATCATATATACTTGAGAATTGTT
387 GTTTTGGTCTTTGAATTAAAA-CTTATATACGTGAGAATTGTT
* ** *
33047597 TCTCT-CTGGGTTCTTGGATGAACTTTTGAACTTGTCAATCTTTTACGAGTTCTTTTATAACTTC
1 TCTCTCCT-GGTTCTTGGA-CAAC-TTCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* * * * *
33047661 GATTCCTTAAAACATTCAAGACGATCAATTCCTTCTAGCAATTTTCCGAACATTCCATGCTCAGG
63 GGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGG
** * * *
33047726 AAATCGCATCATTTCATCGAAATAGTTTGTCATCTTGTAAACAAGTTTTGGTCTTTGAATTACAA
128 AAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTTTTTGAATTA-AA
* * * *** * * *
33047791 A-CTTATTTATGTGAGAATAGTTTCTTTGTTGTTTCTTGGACGAACTTCCAAACTTGCCAAACTT
192 ATCTTATATACGTGAGAAT-TTTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTT
* *
33047855 TTACGAGTTCTTTTATAACTTC-AGTTCCTTAAAACATTCAAGATGATCCATTCCTTCCAGTAAT
256 TTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAAT
* * * * * * * *
33047919 TTTTCTAACATTCCATGCTCGGGAAATTGCATCATTTGCTCCAAGTAGTTT-TCCATTTTTTAAA
320 GTTCCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAA
* *
33047983 CAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACGTGAGAATT-TT
384 CAAGTTTTGGTCTT-TGAATTAAAA-CTTATATACGTGAGAATTGTT
* ** * * * *
33048028 TATC-CCTTAATTCTAGGACGAACTT-ATGAACTTGTCAAACTTTTACGCGTTCTTTGATAACCT
1 TCTCTCC-TGGTTCTTGGAC-AACTTCA--AACTTGTCAAACTTTTACGAGTTCTTTTATAACTT
* * *** * * * * *
33048091 CGTTTCCTTATAGTTTTCAAGACGATCAATTTCTTCCAACAATGTTCCAAACATTCCATCCTCGG
62 CGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGG
*
33048156 GAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTTCTTTGAAGTAA
127 GAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TTTGAATTAA
* * *
33048220 AATCTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACT
191 AATCTTATATACGTGAGAATT-TTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACT
* * * *
33048285 TTTACGAGTTCATTTATAACTTC-AGTTCCTTAAAATATTTAACACGATCCATTCCTTCCAGCAA
255 TTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAA
**
33048349 T-TTCTCGAACATTCCATGCTCGACAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAA
319 TGTTC-CGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAA
*
33048413 ACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTGTT
383 ACAAGTTTTGGTCTTTGAATT-AAAACTTATATACGTGAGAATTGTT
* * * *
33048460 TCTCTCTTGGTTCTTAGATGAACTTCAGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
1 TCTCTCCTGGTTCTTGGA-CAACTTCA-AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCG
* * *
33048525 GTTCCTT-AAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGAGA
64 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGA
* * * * *
33048589 AATTGTATCACTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTTTTAATTAAAA
129 AATCGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAA
* * * * * * * ** *
33048653 TCCTATTTACTTGAGAATTTTTATCCTTTAATTCTAGGACGAACTTATGGACTTGTCAAACTTTT
193 TCTTATATACGTGAGAATTTTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTT
* * **** * *
33048718 AC-ACATTCTTTTATAAGTTCGATTCCTTATTGTATTCAAGACGATCCATTTCTTCCAACAATGT
258 ACGA-GTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATGT
* * *
33048782 TCCAAACATTCCAT-CGTCGGGAAATCGCATCATTTTGTCTAAATAGTTTGTCATTTTGTAAAAA
322 TCCGAACATTCCATGC-TCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACA
* *
33048846 AGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAGTTGTT
386 AGTTTTGGTCTTTGAATT-AAAACTTATATACGTGAGAATTGTT
* * *
33048890 TCTCT-CTGGGTTCTTGGACGTACTTCTGAACTTGTCAAACTTTT-CGAGTTCATTTATAACTT-
1 TCTCTCCT-GGTTCTTGGAC-AACTTC-AAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC
* * * *
33048952 GAGTTCCTTTAGACATTCAAGACGATCCATTCCTTCTAGCAATTTTCCAAACATTTCATGCTCGG
63 G-GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGG
*
33049017 GAAATCACATCATTT
127 GAAATCGCATCATTT
33049032 CATCGAAATT
Statistics
Matches: 3412, Mismatches: 517, Indels: 187
0.83 0.13 0.05
Matches are distributed among these distances:
428 8 0.00
429 210 0.06
430 740 0.22
431 1454 0.43
432 974 0.29
433 26 0.01
ACGTcount: A:0.28, C:0.19, G:0.14, T:0.39
Consensus pattern (428 bp):
TCTCTCCTGGTTCTTGGACAACTTCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGT
TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAA
TCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAATCT
TATATACGTGAGAATTTTTCTCCCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACG
AGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATGTTCCG
AACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTT
TGGTCTTTGAATTAAAACTTATATACGTGAGAATTGTT
Found at i:33048853 original size:21 final size:21
Alignment explanation
Indices: 33048811--33048850 Score: 55
Period size: 21 Copynumber: 2.0 Consensus size: 21
33048801 GGAAATCGCA
* *
33048811 TCATTTTGTCTAAATAGTTTG
1 TCATTTTGTCAAAAAAGTTTG
33048832 TCATTTTGT-AAAAAAGTTT
1 TCATTTTGTCAAAAAAGTTT
33048851 TGTTCTTTGA
Statistics
Matches: 17, Mismatches: 2, Indels: 1
0.85 0.10 0.05
Matches are distributed among these distances:
20 8 0.47
21 9 0.53
ACGTcount: A:0.30, C:0.07, G:0.12, T:0.50
Consensus pattern (21 bp):
TCATTTTGTCAAAAAAGTTTG
Found at i:33049202 original size:171 final size:170
Alignment explanation
Indices: 33048870--33049192 Score: 443
Period size: 171 Copynumber: 1.9 Consensus size: 170
33048860 AATTAAAAAC
* * * **
33048870 TTATATACGTGAGAGTTGTTTCTCTCTGGGTTCTTGGACGTACTTCTGAACTTGTCAAACTTTTC
1 TTATATACGTGAGAATAGTTTCTCTCTGGGTTCTTGGACGAACTTCCAAACTTGTCAAACTTTTC
* * * *
33048935 GAGTTCATTTATAACTTGAGTTCCTTTAGACATTCAAGACGATCCATTCCTTCTAGCAATTTTCC
66 GAGTTCATTTATAACTTGAGTTCCTTAAAACATTCAAAACGATCCATTCCTTCCAGCAATTTTCC
*
33049000 AAACATTTCATGCTCGGGAAATCACATCATTTCATCGAAA
131 AAACATTCCATGCTCGGGAAATCACATCATTTCATCGAAA
* * *
33049040 TTATTTACGTGAGAATAGTTTCTCTGT-TGTCTCTTGGACGAACTTCCAAACTTGTCAAACTTTT
1 TTATATACGTGAGAATAGTTTCTCTCTGGGT-TCTTGGACGAACTTCCAAACTTGTCAAACTTTT
* * * *
33049104 ACGAGTTCTTTTATAACTTCG-GTTCCTTAAAACATTCAAAATGTTCCATTCCTTCCAGTAATTT
65 -CGAGTTCATTTATAACTT-GAGTTCCTTAAAACATTCAAAACGATCCATTCCTTCCAGCAATTT
*
33049168 TTCAAACATTCCATGCTCGGGAAAT
128 TCCAAACATTCCATGCTCGGGAAAT
33049193 TGTATCATTT
Statistics
Matches: 132, Mismatches: 18, Indels: 5
0.85 0.12 0.03
Matches are distributed among these distances:
169 2 0.02
170 53 0.40
171 76 0.58
172 1 0.01
ACGTcount: A:0.26, C:0.21, G:0.14, T:0.38
Consensus pattern (170 bp):
TTATATACGTGAGAATAGTTTCTCTCTGGGTTCTTGGACGAACTTCCAAACTTGTCAAACTTTTC
GAGTTCATTTATAACTTGAGTTCCTTAAAACATTCAAAACGATCCATTCCTTCCAGCAATTTTCC
AAACATTCCATGCTCGGGAAATCACATCATTTCATCGAAA
Found at i:33049404 original size:386 final size:386
Alignment explanation
Indices: 33048703--33049426 Score: 906
Period size: 386 Copynumber: 1.9 Consensus size: 386
33048693 GAACTTATGG
* **** *
33048703 ACTTGTCAAACTTTTACACATTCTTTTATAAGTTCGATTCCTTATTGTATTCAAGACGATCCATT
1 ACTTGTCAAACTTTTACACATTCTTTTATAACTTCGATTCCTTAAAACATTCAAAACGATCCATT
* *
33048768 TCTTCCAACAATGTTCCAAACATTCCATCGTCGGGAAATCGCATCATTTTGTCTAAATAGTTTGT
66 CCTTCCAACAATGTTCCAAACATTCCATCGTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
* * * * *
33048833 CATTTTGTAAAAAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAGTTGTTTCTCTCTG
131 CATTTTGTAAAAAAGTTTTGTTCTGTGAATTAAAAACCTATATACGTGAGAATTGTTTATCCCTG
* * * * *
33048898 GGTTCTTGGACGTACTTCTGAACTTGTCAAACTTTTCGAGTTCATTTATAACTTGAGTTCCTTTA
196 GATTCTTGGACGAACTTATGAACTTGTCAAACTTTACGAGTTCATTTATAACTTGAGTTCCTTAA
* * * * *
33048963 GACATTCAAGACGATCCATTCCTTCTAGCAATTTTCCAAACATTTCATGCTCGGGAAATCACATC
261 GACATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCACATC
33049028 ATTTCATCGAAATTATTTACGTGAGAATAGTTTCTCTGTTGTCTCTTGGACGAACTTCCAA
326 ATTTCATCGAAATTATTTACGTGAGAATAGTTTCTCTGTTGTCTCTTGGACGAACTTCCAA
* * * *
33049089 ACTTGTCAAACTTTTACGA-GTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAAATGTTCCAT
1 ACTTGTCAAACTTTTAC-ACATTCTTTTATAACTTCGATTCCTTAAAACATTCAAAACGATCCAT
** * * * * *
33049153 TCCTTCCAGTAATTTTTCAAACATTCCAT-GCTCGGGAAATTGTATCATTTGGTCTAAGTAGTTT
65 TCCTTCCAACAATGTTCCAAACATTCCATCG-TCGGGAAATCGCATCATTTGGTCTAAATAGTTT
* * * * *
33049217 -TCCATTTTGTAAATAGGTTTTGGTT-TGTGAATTAAAATCCTGTTTACGTGAGAATT-TTTATC
129 GT-CATTTTGTAAAAAAGTTTT-GTTCTGTGAATTAAAAACCTATATACGTGAGAATTGTTTATC
* * *
33049279 CCTTGATT-TTAGGACGAACTTATGAACTTGTCAAACATTTACGCGTTCTTTTATAACTTCGA-T
192 CCTGGATTCTT-GGACGAACTTATGAACTTGTCAAAC-TTTACGAGTTCATTTATAACTT-GAGT
*
33049342 TCCTTAA-AGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAA
254 TCCTTAAGA-CATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAA
* * *
33049406 ATCGCATCATTTGATCTAAAT
318 ATCACATCATTTCATCGAAAT
33049427 AGTTTGTCAT
Statistics
Matches: 284, Mismatches: 46, Indels: 16
0.82 0.13 0.05
Matches are distributed among these distances:
384 2 0.01
385 36 0.13
386 240 0.85
387 6 0.02
ACGTcount: A:0.28, C:0.20, G:0.14, T:0.39
Consensus pattern (386 bp):
ACTTGTCAAACTTTTACACATTCTTTTATAACTTCGATTCCTTAAAACATTCAAAACGATCCATT
CCTTCCAACAATGTTCCAAACATTCCATCGTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
CATTTTGTAAAAAAGTTTTGTTCTGTGAATTAAAAACCTATATACGTGAGAATTGTTTATCCCTG
GATTCTTGGACGAACTTATGAACTTGTCAAACTTTACGAGTTCATTTATAACTTGAGTTCCTTAA
GACATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCACATC
ATTTCATCGAAATTATTTACGTGAGAATAGTTTCTCTGTTGTCTCTTGGACGAACTTCCAA
Found at i:33049631 original size:216 final size:215
Alignment explanation
Indices: 33049040--33050636 Score: 1787
Period size: 216 Copynumber: 7.4 Consensus size: 215
33049030 TTCATCGAAA
* * * * *
33049040 TTATTTACGTGAGAATAGTTTCTCTGTT-GTCTCTTGGACGAACTTCCAAACTTGTCAAACTTTT
1 TTATATACGTGAGAATTGTTTCTCTCTTGGT-TCTTGGACGAACTTTCGAACTTGTCAAACTTTT
* * * *
33049104 ACGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAAATGTTCCATTCCTTCCAGTAATTTT
65 ACGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTT
* * * * * * * *
33049169 TCAAACATTCCATGCTCGGGAAATTGTATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAATAGG
130 CCGAACATTCCATCCTCGGGAAATTGCATCATTTGATCTAAATAGTTTT-CATTTTGTAAACAAG
*
33049234 TTTTGGTT-TGTGAATTAAAATC
194 TTTT-GTTCTGTGAATTAAAAAC
* * * * * * *
33049256 CTGTTTACGTGAGAATT-TTTATCCCTTGATT-TTAGGACGAACTTAT-GAACTTGTCAAACATT
1 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTT-GGACGAACTT-TCGAACTTGTCAAACTTT
* * ** * *
33049318 TACGCGTTCTTTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAACAATGT
64 TACGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTT
* * *
33049383 TCCAAACATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAATAA
129 TCCGAACATTCCATCCTCGGGAAATTGCATCATTTGATCTAAATAGTTT-TCATTTTGTAAACAA
*
33049448 GTTTTGTTCTTTGAATTAAAAAC
193 GTTTTGTTCTGTGAATTAAAAAC
* * * * *
33049471 TTCTATACGTGAGAATTGTTTCGCTCCTGGTTCTTCGACGAACTTTCGAACTAGTCAAACTTTTA
1 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA
* * * * *
33049536 CTAGTACTTTTCTAACTTCAGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCAGCAATTTTC
66 CGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTC
* *** * * * **
33049601 CGAGCATGGAATGCTCGGAAAATTGCATCATTTGGTCTATGTAGTTTTCCATTTTGTAAACAAGT
131 CGAACATTCCATCCTCGGGAAATTGCATCATTTGATCTAAATAGTTTT-CATTTTGTAAACAAGT
*
33049666 TTTGGTT-TGTGAATTAAAATC
195 TTT-GTTCTGTGAATTAAAAAC
* * * * * ** * * * *
33049687 GTATTTACGTGAGAAAT-TTTATCCCTTAATTCTAGGATGAACTTACGAACTTGTTAAACTTTTA
1 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA
* * * * * ** *
33049751 CGCGCTCTTTTATAACTTTGATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTT
66 CGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAAT-TTT
*
33049816 -CGAACATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAACAAG
130 CCGAACATTCCATCCTCGGGAAATTGCATCATTTGATCTAAATAGTTT-TCATTTTGTAAACAAG
* *
33049880 TTTTGTTCTTTGAATTTAAAAC
194 TTTTGTTCTGTGAATTAAAAAC
* * * *
33049902 TTATATATGTGAGAATTGTTTCTCTCTTGGTTTTTGGATGAACTTTCGAACTTGTCAAACTTGTA
1 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA
** * * *
33049967 CGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGGTGATCCATTCCTTCTAGTAAGTTTC
66 CGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTC
* * *
33050032 CGAACATTCCATGCTCGGGAAATTGCATCATTTCATCGAAATAGTTTGTCATTTTGTAAACAAGT
131 CGAACATTCCATCCTCGGGAAATTGCATCATTTGATCTAAATAGTTT-TCATTTTGTAAACAAGT
* * *
33050097 TTTGGTCTATGAATTACAAAC
195 TTTGTTCTGTGAATTAAAAAC
* * * * * * * *
33050118 TTATTTACGTGAGAATAGTTCCTCTCTTGTTTCTTGGATGAACTTCCAAACTTGTCAAATTTTTA
1 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA
* *
33050183 CGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTTCAGTAATTTTC
66 CGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTC
* * * * * *
33050248 TGAACATTCCATACTCGGGAAATTGCATCATTTGGTCTAAGTAGCTTTCCATTTTGTAAATAAGT
131 CGAACATTCCATCCTCGGGAAATTGCATCATTTGATCTAAATAG-TTTTCATTTTGTAAACAAGT
*
33050313 TTTGGAT-TGTGAATTAAAATAC
195 TTT-GTTCTGTGAATTAAAA-AC
* * * * * ** *
33050335 -TATTTACGTAAGAATT-TTTATAC-CTTGATTCTAGGACGAACTTAAGAACTTGCCAAACTTTT
1 TTATATACGTGAGAATTGTTTCT-CTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTT
* * * * * * *
33050397 ACGCGTTCTTTTATAACTTCGATTCCATATAATATTCAAGACGATCCATTCCTTCCAACAATATT
65 ACGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTT
* **
33050462 CCAAACATTCCATCCTCGGGAAATAACATCATTTGATCTAAATAGTTTTTCATTTTGTAAACAAG
130 CCGAACATTCCATCCTCGGGAAATTGCATCATTTGATCTAAATAG-TTTTCATTTTGTAAACAAG
*
33050527 TTTTGTTCTTTGAATTAAAAAC
194 TTTTGTTCTGTGAATTAAAAAC
* *
33050549 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTAGATGAACTTTCGAACTTGTCAAACTTTTA
1 TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA
*
33050614 CGAGTTCTTTTATAACTTTGGTT
66 CGAGTTCTTTTATAACTTCGGTT
33050637 ATTAAATGTG
Statistics
Matches: 1145, Mismatches: 213, Indels: 46
0.82 0.15 0.03
Matches are distributed among these distances:
214 12 0.01
215 517 0.45
216 604 0.53
217 12 0.01
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (215 bp):
TTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA
CGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTC
CGAACATTCCATCCTCGGGAAATTGCATCATTTGATCTAAATAGTTTTCATTTTGTAAACAAGTT
TTGTTCTGTGAATTAAAAAC
Found at i:33049848 original size:431 final size:430
Alignment explanation
Indices: 33049045--33050631 Score: 1929
Period size: 431 Copynumber: 3.7 Consensus size: 430
33049035 CGAAATTATT
* * * * *
33049045 TACGTGAGAATAGTTTCTCT-GTTGTCTCTTGGACGAACTTCCAAACTTGTCAAACTTTTACGAG
1 TACGTGAGAATTGTTTCTCTCCTGGT-TCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAG
* * *
33049109 TTCTTTTATAACTTCGGTTCCTTAAAACATTCAA-AATGTTCCATTCCTTCCAGTAATTTTTCAA
65 TTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGAA-GATCCATTCCTTCCAGCAATTTTCCAA
* * * * *
33049173 ACATTCCATGCTCGGGAAATTGTATCATTTGGTCTAAGTAGTTTTCCATTTTGTAAATAGGTTTT
129 ACATTCCATGCTCGGGAAATTGCATCATTTGATCTAAATAGTTTTCCATTTTGTAAACAAGTTTT
* * * * * *
33049238 GGTTTGTGAATTAAAATCCTGTTTACGTGAGAATTTTTATCCCTTGATTTTAGGACGAACTTATG
194 GGTTTGTGAATTAAAATCTTATTTACGTGAGAAATTTTATCCCTTGATTCTAGGATGAACTTACG
* *
33049303 AACTTGTCAAACATTTACGCGTTCTTTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCAT
259 AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCAT
* *
33049368 TCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTG
324 TCCTTCCAACAATGTTTCGAACATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTG
33049433 TCATTTTGTAAATAAGTTTTGTTCTTTGAATTAAAAACTTCTA
389 TCATTTTGTAAATAAGTTTTGTTCTTTGAATTAAAAACTT-TA
* * * *
33049476 TACGTGAGAATTGTTTCGCTCCTGGTTCTTCGACGAACTTTCGAACTAGTCAAACTTTTACTAGT
1 TACGTGAGAATTGTTTCTCTCCTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGT
* * * * *
33049541 ACTTTTCTAACTTCAGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCAGCAATTTTCCGAGC
66 TCTTTTATAACTTCGGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCAGCAATTTTCCAAAC
*** * * **
33049606 ATGGAATGCTCGGAAAATTGCATCATTTGGTCTATGTAGTTTTCCATTTTGTAAACAAGTTTTGG
131 ATTCCATGCTCGGGAAATTGCATCATTTGATCTAAATAGTTTTCCATTTTGTAAACAAGTTTTGG
* *
33049671 TTTGTGAATTAAAATCGTATTTACGTGAGAAATTTTATCCCTTAATTCTAGGATGAACTTACGAA
196 TTTGTGAATTAAAATCTTATTTACGTGAGAAATTTTATCCCTTGATTCTAGGATGAACTTACGAA
* * * * *
33049736 CTTGTTAAACTTTTACGCGCTCTTTTATAACTTTGATTCCTTATAGTATTCAAGACGATCCATTC
261 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTC
33049801 CTTCCAACAATGTTTCGAACATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTGTC
326 CTTCCAACAATGTTTCGAACATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTGTC
* *
33049866 ATTTTGTAAACAAGTTTTGTTCTTTGAATTTAAAACTTATA
391 ATTTTGTAAATAAGTTTTGTTCTTTGAATTAAAAACTT-TA
* * * * *
33049907 TATGTGAGAATTGTTTCTCTCTTGGTTTTTGGATGAACTTTCGAACTTGTCAAACTTGTACGAGT
1 TACGTGAGAATTGTTTCTCTCCTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGT
** * * * *
33049972 TCTTTTATAACTTCGGTTCCTTAAAACATTCAAGGTGATCCATTCCTTCTAGTAAGTTTCCGAAC
66 TCTTTTATAACTTCGGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCAGCAATTTTCCAAAC
* *
33050037 ATTCCATGCTCGGGAAATTGCATCATTTCATCGAAATAGTTTGT-CATTTTGTAAACAAGTTTTG
131 ATTCCATGCTCGGGAAATTGCATCATTTGATCTAAATAGTTT-TCCATTTTGTAAACAAGTTTTG
* * * ** * * * *
33050101 GTCTATGAATTACAAA-CTTATTTACGTGAGAATAGTTCCTCTCTTGTTTCTTGGATGAACTTCC
195 GTTTGTGAATTA-AAATCTTATTTACGTGAGAA-ATTTTATCCCTTGATTCTAGGATGAACTTAC
* * * **
33050165 AAACTTGTCAAATTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCA
258 GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCA
* ** * * * *
33050230 TTCCTTTCAGTAAT-TTTCTGAACATTCCATACTCGGGAAATTGCATCATTTGGTCTAAGTAGCT
323 TTCCTTCCAACAATGTTTC-GAACATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAG-T
* * *
33050294 TT-CCATTTTGTAAATAAGTTTTGGAT-TGTGAATTAAAATACTATT-
386 TTGTCATTTTGTAAATAAGTTTT-GTTCTTTGAATTAAAA-ACT-TTA
* * * * * ** * *
33050339 TACGTAAGAATT-TTTATAC-CTTGATTCTAGGACGAACTTAAGAACTTGCCAAACTTTTACGCG
1 TACGTGAGAATTGTTTCT-CTCCTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAG
* * * * * * *
33050402 TTCTTTTATAACTTCGATTCCATATAATATTCAAGACGATCCATTCCTTCCAACAATATTCCAAA
65 TTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCAGCAATTTTCCAAA
* ** *
33050467 CATTCCATCCTCGGGAAATAACATCATTTGATCTAAATAGTTTTTCATTTTGTAAACAAGTTTT-
130 CATTCCATGCTCGGGAAATTGCATCATTTGATCTAAATAGTTTTCCATTTTGTAAACAAGTTTTG
* * * * * * * *
33050531 GTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTA-GATGAACTTT
195 GTT-TGTGAATTAAAATCTTATTTACGTGAGAAAT-TTTATCCCTTGATTC-TAGGATGAACTTA
33050595 CGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTT
257 CGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTT
33050632 TGGTTATTAA
Statistics
Matches: 998, Mismatches: 142, Indels: 32
0.85 0.12 0.03
Matches are distributed among these distances:
430 6 0.01
431 805 0.81
432 177 0.18
433 9 0.01
434 1 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (430 bp):
TACGTGAGAATTGTTTCTCTCCTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGT
TCTTTTATAACTTCGGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCAGCAATTTTCCAAAC
ATTCCATGCTCGGGAAATTGCATCATTTGATCTAAATAGTTTTCCATTTTGTAAACAAGTTTTGG
TTTGTGAATTAAAATCTTATTTACGTGAGAAATTTTATCCCTTGATTCTAGGATGAACTTACGAA
CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTC
CTTCCAACAATGTTTCGAACATTCCATCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTGTC
ATTTTGTAAATAAGTTTTGTTCTTTGAATTAAAAACTTTA
Found at i:33050275 original size:647 final size:645
Alignment explanation
Indices: 33049075--33050636 Score: 2092
Period size: 647 Copynumber: 2.4 Consensus size: 645
33049065 GTTGTCTCTT
* * * * * *
33049075 GGACGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAACATT
1 GGACGAACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAATATT
* * * ** * * * * *
33049140 CAAAATGTTCCATTCCTTCCAGTAATTTTTCAAACATTCCATGCTCGGGAAATTGTATCATTTGG
66 CAAGACGATCCATTCCTTCCAACAATATTTCAAACATTCCATCCTCGGGAAATAGCATCATTTGA
* * * * * * *
33049205 TCTAAGTAGTTTTCCATTTTGTAAATAGGTTTTGGTT-TGTGAA-TTAAAATCCTGTTTACGTGA
131 TCTAAATAGTTTT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTTAAAA-CTTATATACGTGA
* * * * * *
33049268 GAATT-TTTATCCCTTGATTTTAGGACGAACTTAT-GAACTTGTCAAACATTTACGCGTTCTTTT
193 GAATTGTTTCTCTCTTGGTTTTTGGATGAACTT-TCGAACTTGTCAAAC-TTTACGAGTTCTTTT
* **
33049331 ATAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCA
256 ATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCA
* * * * *
33049396 TCCTCGGGAAATCGCATCATTTGATCTAAATAGTTTGTCATTTTGTAAATAAGTTTTGTTCTTTG
321 TCCTCGGGAAATCGCATCATTTCATCGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATG
* * * * *
33049461 AATTAAAAACTTCTATACGTGAGAATTGTTTCGCTCCTGGTTCTTCGACGAACTTTCGAACTAGT
386 AATTAAAAACTTATATACGTGAGAATAGTTCCGCTCCTGGTTCTTCGACGAACTTCCAAACTAGT
* *
33049526 CAAACTTTTACTAGTACTTTTCTAACTTCAGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCC
451 CAAACTTTTACGAGTACTTTTATAACTTCAGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCC
* * * * *
33049591 AGCAATTTTCCGAGCATGGAATGCTCGGAAAATTGCATCATTTGGTCTATGTAGTTTTCCATTTT
516 AGCAATTTTCCGAACATGCAATACTCGGAAAATTGCATCATTTGGTCTAAGTAGCTTTCCATTTT
* * *
33049656 GTAAACAAGTTTTGGTTTGTGAATTAAAAT-CGTATTTACGTGAGAAATTTTATCCCTTAATTCT
581 GTAAACAAGTTTTGGATTGTGAATTAAAATAC-TATTTACGTAAGAAATTTTATACCTTAATTCT
33049720 A
645 A
* * * * *
33049721 GGATGAACTTACGAACTTGTTAAACTTTTACGCGCTCTTTTATAACTTTGATTCCTTATAGTATT
1 GGACGAACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAATATT
* * *
33049786 CAAGACGATCCATTCCTTCCAACAATGTTTCGAACATTCCATCCTCGGGAAATCGCATCATTTGA
66 CAAGACGATCCATTCCTTCCAACAATATTTCAAACATTCCATCCTCGGGAAATAGCATCATTTGA
*
33049851 TCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTTAAAACTTATATATGTGAGA
131 TCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGTTCTTTGAATTTAAAACTTATATACGTGAGA
33049916 ATTGTTTCTCTCTTGGTTTTTGGATGAACTTTCGAACTTGTCAAACTTGTACGAGTTCTTTTATA
195 ATTGTTTCTCTCTTGGTTTTTGGATGAACTTTCGAACTTGTCAAACTT-TACGAGTTCTTTTATA
** * ** * *
33049981 ACTTCGGTTCCTTAAAACATTCAAGGTGATCCATTCCTTCTAGTAA-GTTTCCGAACATTCCATG
259 ACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATG-TTCCAAACATTCCATC
*
33050045 CTCGGGAAATTGCATCATTTCATCGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATGAA
323 CTCGGGAAATCGCATCATTTCATCGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATGAA
* * * * * * * *
33050110 TTACAAACTTATTTACGTGAGAATAGTTCCTCTCTTGTTTCTTGGATGAACTTCCAAACTTGTCA
388 TTAAAAACTTATATACGTGAGAATAGTTCCGCTCCTGGTTCTTCGACGAACTTCCAAACTAGTCA
* * * * *
33050175 AATTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTTCAG
453 AACTTTTACGAGTACTTTTATAACTTCAGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCAG
* * * * *
33050240 TAATTTTCTGAACATTCCATACTCGGGAAATTGCATCATTTGGTCTAAGTAGCTTTCCATTTTGT
518 CAATTTTCCGAACATGCAATACTCGGAAAATTGCATCATTTGGTCTAAGTAGCTTTCCATTTTGT
* * *
33050305 AAATAAGTTTTGGATTGTGAATTAAAATACTATTTACGTAAGAATTTTTATACCTTGATTCTA
583 AAACAAGTTTTGGATTGTGAATTAAAATACTATTTACGTAAGAAATTTTATACCTTAATTCTA
* * *
33050368 GGACGAACTTAAGAACTTGCCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCATATAATATT
1 GGACGAACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAATATT
* *
33050433 CAAGACGATCCATTCCTTCCAACAATATTCCAAACATTCCATCCTCGGGAAATAACATCATTTGA
66 CAAGACGATCCATTCCTTCCAACAATATTTCAAACATTCCATCCTCGGGAAATAGCATCATTTGA
*
33050498 TCTAAATAGTTTTTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGA
131 TCTAAATAG-TTTTCATTTTGTAAACAAGTTTTGTTCTTTGAATTTAAAACTTATATACGTGAGA
* *
33050563 ATTGTTTCTCTCTTGGTTCTTAGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATA
195 ATTGTTTCTCTCTTGGTTTTTGGATGAACTTTCGAACTTGTCAAAC-TTTACGAGTTCTTTTATA
*
33050628 ACTTTGGTT
259 ACTTCGGTT
33050637 ATTAAATGTG
Statistics
Matches: 800, Mismatches: 106, Indels: 19
0.86 0.11 0.02
Matches are distributed among these distances:
645 3 0.00
646 159 0.20
647 632 0.79
648 6 0.01
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (645 bp):
GGACGAACTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAATATT
CAAGACGATCCATTCCTTCCAACAATATTTCAAACATTCCATCCTCGGGAAATAGCATCATTTGA
TCTAAATAGTTTTCATTTTGTAAACAAGTTTTGTTCTTTGAATTTAAAACTTATATACGTGAGAA
TTGTTTCTCTCTTGGTTTTTGGATGAACTTTCGAACTTGTCAAACTTTACGAGTTCTTTTATAAC
TTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTC
GGGAAATCGCATCATTTCATCGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATGAATTA
AAAACTTATATACGTGAGAATAGTTCCGCTCCTGGTTCTTCGACGAACTTCCAAACTAGTCAAAC
TTTTACGAGTACTTTTATAACTTCAGTTCCTTAAAACATTCAAGAAGATCCATTCCTTCCAGCAA
TTTTCCGAACATGCAATACTCGGAAAATTGCATCATTTGGTCTAAGTAGCTTTCCATTTTGTAAA
CAAGTTTTGGATTGTGAATTAAAATACTATTTACGTAAGAAATTTTATACCTTAATTCTA
Found at i:33050723 original size:39 final size:39
Alignment explanation
Indices: 33050677--33050775 Score: 162
Period size: 39 Copynumber: 2.5 Consensus size: 39
33050667 TTAAATAGGG
33050677 TTTTAATGTGTCTTAGTTTGATACATATTTAATAGTTGT
1 TTTTAATGTGTCTTAGTTTGATACATATTTAATAGTTGT
* *
33050716 TTTTAATGTGTCTTATTTTGGTACATATTTAATAGTTGT
1 TTTTAATGTGTCTTAGTTTGATACATATTTAATAGTTGT
* *
33050755 TTTTAAGGTGTCTAAGTTTGA
1 TTTTAATGTGTCTTAGTTTGA
33050776 GACAAATTAA
Statistics
Matches: 54, Mismatches: 6, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
39 54 1.00
ACGTcount: A:0.24, C:0.05, G:0.17, T:0.54
Consensus pattern (39 bp):
TTTTAATGTGTCTTAGTTTGATACATATTTAATAGTTGT
Found at i:33050857 original size:32 final size:32
Alignment explanation
Indices: 33050821--33050883 Score: 90
Period size: 32 Copynumber: 2.0 Consensus size: 32
33050811 AGTCGAAATT
* *
33050821 AATTAACTGATTAATGTGTTTCAGGTACATGC
1 AATTAACTGATTAATATATTTCAGGTACATGC
* *
33050853 AATTAGCTGATTAATATATTTTAGGTACATG
1 AATTAACTGATTAATATATTTCAGGTACATG
33050884 TATGGATGGC
Statistics
Matches: 27, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
32 27 1.00
ACGTcount: A:0.33, C:0.10, G:0.17, T:0.40
Consensus pattern (32 bp):
AATTAACTGATTAATATATTTCAGGTACATGC
Found at i:33051993 original size:21 final size:23
Alignment explanation
Indices: 33051969--33052013 Score: 58
Period size: 23 Copynumber: 2.0 Consensus size: 23
33051959 AGAAGTGCAA
*
33051969 AGTTT-GAAA-CATTAAAAAAAG
1 AGTTTCGAAAGCATAAAAAAAAG
*
33051990 AGTTTCGAAAGTATAAAAAAAAG
1 AGTTTCGAAAGCATAAAAAAAAG
33052013 A
1 A
33052014 AGGCTAGTTT
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
21 5 0.25
22 4 0.20
23 11 0.55
ACGTcount: A:0.58, C:0.04, G:0.16, T:0.22
Consensus pattern (23 bp):
AGTTTCGAAAGCATAAAAAAAAG
Found at i:33054081 original size:19 final size:21
Alignment explanation
Indices: 33054054--33054121 Score: 52
Period size: 20 Copynumber: 3.2 Consensus size: 21
33054044 TGAGAATGAA
*
33054054 AAAGAAAAGAAAATTGAAAA-
1 AAAGAAAAGAAAAATGAAAAC
33054074 AAAG-AAAGCAAAAATGAGAGAAC
1 AAAGAAAAG-AAAAATGA-A-AAC
* * *
33054097 AAAGCAAAG-AAAGTGAAAAG
1 AAAGAAAAGAAAAATGAAAAC
33054117 AAAGA
1 AAAGA
33054122 GAGAAAAGAA
Statistics
Matches: 39, Mismatches: 4, Indels: 10
0.74 0.08 0.19
Matches are distributed among these distances:
19 4 0.10
20 17 0.44
21 2 0.05
22 8 0.21
23 4 0.10
24 4 0.10
ACGTcount: A:0.69, C:0.04, G:0.21, T:0.06
Consensus pattern (21 bp):
AAAGAAAAGAAAAATGAAAAC
Found at i:33054129 original size:13 final size:14
Alignment explanation
Indices: 33054110--33054148 Score: 53
Period size: 13 Copynumber: 2.9 Consensus size: 14
33054100 GCAAAGAAAG
33054110 TGAAAAGAAAGAGA
1 TGAAAAGAAAGAGA
*
33054124 -GAAAAGAAAAAGA
1 TGAAAAGAAAGAGA
*
33054137 TGAAAAGGAAGA
1 TGAAAAGAAAGA
33054149 AAAAGATGAA
Statistics
Matches: 21, Mismatches: 3, Indels: 2
0.81 0.12 0.08
Matches are distributed among these distances:
13 12 0.57
14 9 0.43
ACGTcount: A:0.67, C:0.00, G:0.28, T:0.05
Consensus pattern (14 bp):
TGAAAAGAAAGAGA
Found at i:33054141 original size:9 final size:9
Alignment explanation
Indices: 33054127--33054172 Score: 56
Period size: 9 Copynumber: 5.1 Consensus size: 9
33054117 AAAGAGAGAA
33054127 AAGAAAAAG
1 AAGAAAAAG
* *
33054136 ATGAAAAGG
1 AAGAAAAAG
33054145 AAGAAAAAG
1 AAGAAAAAG
* *
33054154 ATGAAAAGG
1 AAGAAAAAG
33054163 AAGAAAAAG
1 AAGAAAAAG
33054172 A
1 A
33054173 GATAGAAAAA
Statistics
Matches: 29, Mismatches: 8, Indels: 0
0.78 0.22 0.00
Matches are distributed among these distances:
9 29 1.00
ACGTcount: A:0.70, C:0.00, G:0.26, T:0.04
Consensus pattern (9 bp):
AAGAAAAAG
Found at i:33054148 original size:18 final size:18
Alignment explanation
Indices: 33054127--33054172 Score: 92
Period size: 18 Copynumber: 2.6 Consensus size: 18
33054117 AAAGAGAGAA
33054127 AAGAAAAAGATGAAAAGG
1 AAGAAAAAGATGAAAAGG
33054145 AAGAAAAAGATGAAAAGG
1 AAGAAAAAGATGAAAAGG
33054163 AAGAAAAAGA
1 AAGAAAAAGA
33054173 GATAGAAAAA
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
18 28 1.00
ACGTcount: A:0.70, C:0.00, G:0.26, T:0.04
Consensus pattern (18 bp):
AAGAAAAAGATGAAAAGG
Found at i:33057386 original size:37 final size:38
Alignment explanation
Indices: 33057279--33057375 Score: 133
Period size: 39 Copynumber: 2.5 Consensus size: 38
33057269 TTAAATAGGG
33057279 TTTACTGTGTCTTAGTTTGATACATATTTAATAGTTGTT
1 TTTA-TGTGTCTTAGTTTGATACATATTTAATAGTTGTT
* *
33057318 TTTAATGTGTCCTATTTTGATACATATTTAATAGTTG-T
1 TTT-ATGTGTCTTAGTTTGATACATATTTAATAGTTGTT
*
33057356 TTTATGTGTGTTAAGTTTGA
1 TTTATGTGTCTT-AGTTTGA
33057376 GACAAATTAA
Statistics
Matches: 51, Mismatches: 5, Indels: 5
0.84 0.08 0.08
Matches are distributed among these distances:
37 7 0.14
38 10 0.20
39 33 0.65
40 1 0.02
ACGTcount: A:0.24, C:0.06, G:0.16, T:0.54
Consensus pattern (38 bp):
TTTATGTGTCTTAGTTTGATACATATTTAATAGTTGTT
Found at i:33058785 original size:215 final size:216
Alignment explanation
Indices: 33058417--33095684 Score: 27866
Period size: 216 Copynumber: 172.0 Consensus size: 216
33058407 TCGTATCAGT
* * * * * *
33058417 ATTCAAGACAATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGG-AATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33058481 TGGTCT-AATAG-TTGTCATTTTGTAAACAAG-TTTGTTCTTTGAATTAAAAACTTATATACGTA
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* *
33058543 AGAATTATTTCTCTCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33058608 ATAACTTC-ATTTCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* ** *
33058628 ATTCAAGATGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33058693 TGATCTAAATAGTTTGTCATTTTTCTAAACAAGTTTTGGTCTTTGAATAAAAAACTTATATA-GA
66 TGGTCTAAATAGTTTGTCA-TTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACG-
* * * * *
33058757 T-AGAATTGTTTCTCTCTTGGTTCTTGGATGAAC-ATCCAACTTGTCAAACTTTTATGAGTCCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
*
33058820 TTATAACTTCGGTTCCTTAAAAC
194 TTATAACTTCGATTCCTTAAAAC
* * * * * *
33058843 ATTCAAGACGATCCATTCCATCCA-CAATTTTTTCGAACATCCCATGC-CCGGAAATTGTATCAA
1 ATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * * *
33058906 TTGGTCTAAGTTGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTAC
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATAC
* * * * * *
33058969 GTGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAAC-TTTACAAGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
33059032 TTTATAACTTCGATTCCTTAAAAC
193 TTTATAACTTCGATTCCTTAAAAC
* *
33059056 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCACGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33059121 TTGTCTAAGAT-GTTT-TCCATTTTGT-AA-AAGGTTTGGT-TTGTGAA-TAAAATCCTATTTAC
66 TGGTCTAA-ATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAA-ACT-TATA-
* * ** * * * * *
33059180 TAC-TGAGAATT-TTTATCCCTTGACTCTAGGAAGAACATACAAACTTGTCAAACTTTTACGCA-
125 TACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AG
* * **
33059242 TTCTTTTATAACTTTGATTCCTTATAGT
189 TTCTTTTATAACTTCGATTCCTTAAAAC
* ** * * *
33059270 ATTCAAGAAGATCCATTCCTTCCAAAAATGTTTCCAAACATTCCATCCTCAGGAAATTGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAAT-TTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * *
33059335 TTGGTCTAAAAAGTTTGTCATTTTGTAAACAAGTTTTGTTCCTTGAGTTAAAAACTTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
*
33059400 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAAATTTTACGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33059465 TATAACTT-TAGTTCCTTAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* ** **
33059487 ATTCAAGACGATCCATTCCATCCAGCAATTTTCCGAACATTCCATGCTCGAAAAACCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* ** *
33059552 TCGTCTAAATTTTGTTGTCATTTTGTAAACAAGTTTTGGTCTTTG-ATT-AAAACTTATAT-TGT
66 TGGTCTAAATAGT-TTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * *
33059614 GAGAATTGTTTCTCT-TTCGGTTCTTGGATGAAC-ATCCAACTTGTCAAACTTTTTCGAGTCCTT
130 GAGAATTGTTTCTCTCTT-GGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* *
33059677 TTATAACTTTGGTTCCTT-AAAC
194 TTATAACTTCGATTCCTTAAAAC
* ** *
33059699 ATTCAAGACGATCCATTCCTTCCATCAATTTTTTGAACATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33059764 TGGTCTAAGTAGTTTTTCCATTATGTAAACAAGTTTTGGT-TTGTGAATTTAAATCATATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * *
33059828 TGAAAATT-TTTATCCCTTGATTCTAGGATGAACTTACAAACTTGTCAAACTTTTACGAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* **
33059892 TTATAACTTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * * * *
33059915 ATTCAAGACGATCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTC-GGAAATCGTAACATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33059979 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTCCTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* *
33060043 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33060108 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * *
33060129 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAAAATTCTATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33060194 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAG-TTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * *
33060256 TGATAGTTGTTT-TCCCTTGATTCTAGGAC-AAGCTTACGAACTTGTCAAACTTTTACGCGTTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAA-CTTTCGAACTTGTCAAACTTTTACGAGTTCT
* **
33060319 TTTATAACTTCGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * *
33060343 ATTCAAGACGATCCATTTCTTCGTA-CAATGTTCCAAACATTCCATCCTCGGGAAATTGCATCAT
1 ATTCAAGACGATCCATTCCTTC-CAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * *
33060407 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACCTATATACTT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
33060472 GAGAATTGTTTCTCTCTT-GTTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTACGAG-T-TT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTT
*
33060533 TTATAACTT-TAGTTCCTTAAAAC
194 TTATAACTTCGA-TTCCTTAAAAC
* ** * ** *
33060556 ATTCAAGACGATCCATTCCATCCAGCAATTTTTTGAACATTCCATGCTTGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33060621 TGG-CCATATAGTTT-TCATTTTGTAAACAAGTTTTGGGTCTTTGAATTAAAAACATATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GGTCTTTGAATTAAAAACTTATATACGT
* * ** *
33060684 GAGAATTGTTTC-CATCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTATAAGTCCTT
130 GAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
*
33060748 TTATAACTTCGGTTCCTTAAAAC
194 TTATAACTTCGATTCCTTAAAAC
* * * *
33060771 ATTCAAGACGATCCATTCCTTCTAGCAATTTTTCGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
** * * * *
33060836 TGGTCTAGGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * ** * * * *
33060899 TGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACGAACTTGTCAAACCTTCACGCGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * **
33060963 TTATAACTTCGATTCCGTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * * * **
33060986 ATTCAAGACAATTCATTCCGTCCAACAATGTTCCAAACATT-CATCCTCAGGAAACAGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33061050 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33061115 AGAATTGTTTCTATCTTGGTTCTTGGACGAACTTTCGAACTTGCCAAACTTTTACGAGTTCTATT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33061180 ATAACTTC-AGTTCCATAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * ** *
33061201 ATTCAAGACGATCCATTCCTTCTAGCAA-TTTCCAAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33061265 TGGTCTAAATAGCTTGTCATTTTGTAAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * * *
33061330 GAGAATTGTTTCTCGCTCGGTTCCTGGATGAACATCCGAACTTGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33061395 TATAA-TTTGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * * *
33061416 ATTC-AGACGATCCATTCCTTCTAGTAATTTTTCAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33061480 T-GTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * * * * *
33061542 TAATAATT-TTTGTCCCTTGATTCTAGGACGAGCTTACGAATTTATCAAACTTTTACGCGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * **
33061606 TTACAACTTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * ** * * * * *
33061629 ATTCAAGACGATCCATTTCTTCGAATAATGTTCCAAACAATCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33061694 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33061759 AGAATTGTTTTCTCTCTTGGCTCTTGGACGAACTTTCGAACTTGTTAACCTTTTACGAGTTCTTT
131 AGAATTG-TTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33061824 TAT-ACTTC-AGTTCCATAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* * * ** *
33061845 ACTCAAGACGATCCATTCCTTCCAGTAATTTTTCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33061910 TGGT-TCAAATAGTTTGTCATCTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATATAGGT
66 TGGTCT-AAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * *
33061974 GAGAATTGTTTCTCTC-TGGCTCCTGTACGAACTTTCGAACTTGTCAAACATTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33062038 TATAACTTCGGTTCCTTAGAAC
195 TATAACTTCGATTCCTTAAAAC
** * * *
33062060 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTTGAAAATTCCATGATCGGGAAATTACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33062125 TGGTCTAAGTAGTTAT-TAATTTTGAAAACAAGTTTTGGTTTTTGAATTAAAATCCTATTTACGT
66 TGGTCTAAATAGTT-TGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * *
33062189 AAGAATT-TTATC-C-CTTGATTCTAGGACAAACTTACGAACTTGTCAAACTTTAACGCA-TTCT
130 GAGAATTGTT-TCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCT
* * * * **
33062250 TTTATCACTTTGATTCTTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * *
33062274 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATCCCATCCTCGGGAAATTGCATTA-T
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33062338 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * *
33062403 AGAATTGTTTCTCTCTGGGTTCTTAGATGAACTTCCGAACTTGTCAAACTTTTAAGTGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33062468 ATAACTTC-AGTTCCATAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * * * * ** *
33062489 AATCAAGACGATCCATTCCTTCTACCAATTTTTCGGACATTCCATGCTCGACAAATTGCATTATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33062554 TGTTCTAAATA-TTTGTTATTTTGTAAACAAATTTTGGTCCTTCAATTAAAAACTTTTATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * * *
33062618 AGAATTGTTTCTCACTCGGTTCTTGGACGAACTTCCAAACTTGTCAAACATTTACAAGTTCTTTA
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33062683 ATAACTACGGTTCCCTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * * *
33062704 ATTCAAGGCGATCCATTCCTTCCAGCAATTTTCTGAACATTCAATGCACGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33062769 TGGTCTAAGTAGTTT-TCCATTTTCTAAACAAGTTTTGGT-TTGTGAATCAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * *** * * * ** * *
33062832 TGATAATT-TTTATCACTAAATTCTAGGATGAGCTAACGAACTTGTCAAACTTTTACGCGTTCGT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * **
33062896 TTATAACTTCTATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * ** *
33062919 ATTGAAGACGATCCATTTCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCACATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33062984 TGGT-TAACTAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33063048 AGAAAAT-TTTCTCTCTGGGTTCCTGGACGACTTTCACTTTC-AACTTGTCAAACTTTTAGGAGT
131 AG-AATTGTTTCTCTCTTGGTTCTTGGACGA-----ACTTTCGAACTTGTCAAACTTTTACGAGT
*
33063111 TCTTTTATAACTTCGGTTCCTTAAAAC
190 TCTTTTATAACTTCGATTCCTTAAAAC
* * * ** *
33063138 GTTCAAGACGTTCCATTCCTTCCAACAATTTTCTAAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33063203 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * *
33063266 TGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTACGAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * **
33063330 TTATGACTTCGATT-CTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* ** * * * ** *
33063352 ATTCAAGATGATCCATTCCTTCCAATAATGTTCCAAACATTCCAT-CATCAGGAAATCACCTCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGC-TCGGGAAATTGCATCAT
* * *
33063416 TTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTGTTGTTCTTTGAATTAAAAACTTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * *
33063481 GAGAATTGTTTATCTCTAGGTTCTTGGACAAACTTTTGAACTTGTCAAACATTGATC-AGTTCTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA-CGAGTTCTT
* *
33063545 TTACAACTTC-ATTTCCTTAAAAT
194 TTATAACTTCGA-TTCCTTAAAAC
* * * * *** * *
33063568 ATTCAAGATGATCCATTCCTTCCAGTAATTTTTCAAACATTCCATGCTCAACAAATCGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33063633 TGGTCTAAATAGTTTGTCGTTTTGTAAAAAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33063698 AGAATTGTTTCTCTCTTAGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33063763 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * *
33063784 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33063849 TGGTCTAAGTAGTTAGTCATTTTGTAAACAACTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * **
33063914 AGAATTGTTTCTCTCTGGGTTCTTGGACGAACTTTCGAACTTGTCAACCTTTTATAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33063979 ACAACTTC-ATTTCCTTAACAT
196 ATAACTTCGA-TTCCTTAAAAC
* * * * * ** *
33064000 ATTCAAGATGATCCATTCATTCAAGCAATTTTTCAAACATTCCATGCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33064065 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33064130 AGAATTGTTTCCCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33064195 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * *
33064216 ATTCAAGACGATCCATTCCTTCCAGCAATTTAT-CGAATATTCCATGCTTGGGAAATTGTATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTT-TCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * *
33064280 TTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATGCATTAAAAACTTATATAGGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * *
33064345 GAGAATTATTTCTCGT-TCGGTTCTTGGACAAACTTCCGAACTTGTCAAACCTTTACAAGTTCTT
130 GAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
*
33064409 TTATAACTTCGGTTCCTTAAAAC
194 TTATAACTTCGATTCCTTAAAAC
* * ** *
33064432 ATTCAAGACGATCCACTCCTTCCAGTAATTTTCTAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33064497 TGGTCTAAGTAGTTT-TCCATTTTGTAACCAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * * *
33064560 TTAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTATGCGTTCCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* **
33064624 TTATAACTTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * *
33064647 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33064712 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33064777 CGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
33064842 ATAACTTC-AGTTCCTTAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * ** *
33064863 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTCTGAACATTCCGTGCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33064927 TGGCCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * ** *
33064991 AGAATTGTTTCCCTCTTAGTTCTTGGATGAACTTTCGAACTTGTTAAACTTTTATAAGTCCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33065056 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * *
33065077 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33065142 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATT-AAAATTCTATTTAC
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACT-TATATAC
* * * * ** * * * *
33065204 ATGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACAAACTTGTCAAACTTTTATGCGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* * * **
33065268 TTTGTAACTTTGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* ** * * * * * **
33065292 ATTCAAGATGATCCATTCCAACCAACAATGTTCCAAACATT-CATCCTTGGG-AATCACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33065355 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33065420 AGAATTGTTTCTTTCTTGGTCCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTTTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33065485 ATAACTTC-AGTTCCTTCAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* ** *
33065506 ATTCAAGACGA-CCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33065570 TGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTGTTTGAATTAAAAACTTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * *
33065635 GAGAATTGTTTCTCGCTAGGTTCTTGGACGAAATTTCGAACTTGTCAAAATTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33065700 TATAACTTCGGTTCCTTAAAAG
195 TATAACTTCGATTCCTTAAAAC
* * *
33065722 ATTCAAGATGATCCATCCATTCCTTCCAGCAATTTTCTGAAAATTCCATGCTCGGGAAATTGCAT
1 ATTC-A-A-GA-CGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCAT
* *
33065787 CATTTGGTCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATATT
62 CATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATA
* * * * * * *
33065851 GGTGCGAATTGTTTCCCTCTTGGTTCTTGGATGAACTTTCGAAGTTCTCAAACTTTTA-GAAGTC
127 CGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTT
*
33065915 CTTTTATAACTTCGGTTCCTTAAAAC
191 CTTTTATAACTTCGATTCCTTAAAAC
* * *
33065941 ATTGAAGACGATCCATTCCTTCCAGCAATTTTCCGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* ** * * * * *
33066006 TTGTCTAGGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGGGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * ** * * *
33066069 TGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACGAACTTATCAAACTTTTACGCGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * * **
33066133 TTACAACTTTGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33066156 ATTCAAGACGATCCATTTCTTCGAACAATGTTCCAAACAATCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33066221 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
*
33066286 AGAATTGTTTCTCTCTTGGCTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* *
33066351 ATAACTTC-AGTTCCATATAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * ** *
33066372 ACTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33066437 TGGT-TCAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATATAGGT
66 TGGTCT-AAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * *
33066501 GAGAATTGTTTCTCTCTTGGCTCTTGGACGAACTTCCGAACTTGTCAAACATTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33066566 TATAACTTCGGTTCCTTAGAAC
195 TATAACTTCGATTCCTTAAAAC
* ** * * *
33066588 ATTCAAGACGATCTATTCCTTCCAGCAATTTTTTGAAAATTCCATGATCGGGAAATTACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33066653 TGGTCTAAGTAG-TTATCAATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAATAC-TATTTACG
66 TGGTCTAAATAGTTTGTC-ATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAA-ACTTATATACG
* * * * * * * * *
33066716 TAAGAATT-TTTATCCCTTGATTCTAGGACAAACTTACGGACTTGTCAAACTTTAACGCA-TTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCT
* * * **
33066779 TTTATAACTTTGATTCTTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * *
33066803 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATCCCATCCTCGGGAAATTGCATTATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33066868 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * * *
33066933 AGAATTGTTTCTCTCTGGGTTCTTAGATGAACTTCCGAACATGTCAAACTTTTAAGTGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
33066998 ATAACTTC-AGTTCCTTAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * * * ** *
33067019 AATCAAGACGATCCATTCCTTCTACCAATTTTCCGGACATTCCATGCTCGACAAATTGCATTATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33067084 TGTTCTAAATAGTTTGTTATTTTGTAAACAAATTTTGGTCCTTCAATTAAAAACTTTTATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33067149 AGAATTGTTTCTCTCTCGGTTCTTGGACGAACTTCCGAACTTCCGAACTTGTCAAACATTTACAA
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAAC-T------TT-CGAACTTGTCAAACTTTTACGA
* * * *
33067214 GTTCTTTAATAACTACGGTTCCCTAAAAC
188 GTTCTTTTATAACTTCGATTCCTTAAAAC
* * *
33067243 ATTCAAGGCGATCCATTCCTTCCAGCAATTTTCTGAACATTCAATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33067308 TGGTCTAAGTAGTTT-TCCATTTTCTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * *** * * ** * * *
33067371 TGATAATT-TTTATCGCTAAATTCTAGGATGAACTAACGAACTTGTCAAACTTTTGCGCGTTCGT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * * **
33067435 TTATAACTTCTATTGCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * * ** *
33067458 ATTGAAGATGATCCATTTCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCACATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33067523 TGGT-TAACTAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33067587 AGAAAAT-TTTCTCTCTGGGTTCCTGGACGAACTTTCAAACTTGTCAAACTTTTAGGAGTTCTTT
131 AG-AATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33067651 TATAACTTCGGTTCCTTAAAA-
195 TATAACTTCGATTCCTTAAAAC
* * ** *
33067672 AGTTCAAGACGTTCCATTCCTTCCAACAATTTTCTAAACATTCCATGCTCGAGAAATTGCATCAT
1 A-TTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * * * *
33067737 TTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTAAATTAAAATCCTATTTAT
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATAC
* * * * * *
33067800 GTGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTACGCGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* **
33067864 TTTATAACTTCGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* ** * * ** *
33067888 ATTCAAGATGATCCATTCCTTCCAATAATGTTCCAAACATTCCAT-CGTCGGGAAATCACCTCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGC-TCGGGAAATTGCATCAT
* * *
33067952 TTGGTCTAACTAGTTTGCCATTTTGTAAACAAGTGTTT-TTCTTTGAATTAAAAACTTATATACG
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGT-TTTGGTCTTTGAATTAAAAACTTATATACG
* * * * *
33068016 TGAGAATTATTTATCTCTAGGTTCTTGGACAAACTTTTGAACTTGTCAAACTTTTATC-AGTTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA-CGAGTTCT
* *
33068080 TTTACAACTTC-ATTTCCTTAAAAT
193 TTTATAACTTCGA-TTCCTTAAAAC
* * * * *** * *
33068104 ATTCAAGATGATCCATTCCTTCCAGTAATTTTTCAAACATTCCATGCTCAACAAATCGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
** * * *
33068169 TGGTCTAAATAGTTTGTTGTTTTGTAAAAAAGTTTTGGTCTTTGAATTAAAAACTTATGTAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33068234 AGAATTGTTTCTCTCTTAGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33068299 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
** * *
33068320 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTTGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33068385 TGGTCTAAGTAGTTAGTCATTTTGTAAACAATTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * **
33068450 AGAATTGTTTCTCTCTGGGTTCTTGGACGAACTTTCGAACTTGTCAACCTTTTATAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33068515 ACAACTTC-ATTTCCTTAACAT
196 ATAACTTCGA-TTCCTTAAAAC
* * * * * ** *
33068536 ATTCAAGATGATCCATTCATTCAAGCAATTTTTCAAACATTCCATGCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33068601 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33068665 AGAATTGTTTCCCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33068730 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* *
33068751 ATTCAAGACGATCCATTCCTTCCAGCAATTTAT-CGAATATTCCATGCTCGGGAAATTGTATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTT-TCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * *
33068815 TTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATGCATTAAAAACTTATATAGGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * *
33068880 GAGAATTATTTCTCGT-TCGGTTCTTGGACAAACTTCCGAACTTGTC-AACCTTTACAAGTTCTT
130 GAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
*
33068943 TTATAACTTCGGTTCCTTAAAAC
194 TTATAACTTCGATTCCTTAAAAC
* * ** * *
33068966 ATTCAAGACGATCCACTCCTTCCAGTAATTTTCTAAAAATTCCATGCTAGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33069031 TGGTCTAAGTAGTTT-TCCATTTTGTAACCAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * * *
33069094 TTAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTATGCGTTCCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* **
33069158 TTATAACTTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * *
33069181 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33069246 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33069311 CGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
33069376 ATAACTTC-AGTTCCTTAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * * ** *
33069397 ATTCAAGACGAT-CATTCCTTCCAGTAATTTTCTGAACATTCCGTGCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33069461 TGGCCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * ** *
33069525 AGAATTGTTTCCCTCTTAGTTCTTGGATGAACTTTCGAACTTGTTAAACTTTTATAAGTCCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33069590 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * *
33069611 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33069676 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATT-AAAATTCTATTTAC
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACT-TATATAC
* * * * ** * * * * *
33069738 ATGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACAAACTTGTTAAACTTTTATGCGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* * * **
33069802 TTTGTAACTTTGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* ** * * * * * **
33069826 ATTCAAGATGATCCATTCCAACCAACAATGTTCCAAACATT-CATCCT-TGGAAATCACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33069889 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33069954 AGAATTGTTTCTTTCTTGGTCCTTGGACGAACTTCCGAACTTGTCAATCTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33070019 ATAACTTC-AGTTCCTTCAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * ** *
33070040 ATTCAAGACGA-CCATTCCTTTCAGCAATTTTTCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33070104 TGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTGTTTAAATTAAAAACTTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * *
33070169 GAGAATTGTTTCTCGCTAGGTTCTTGGACGAAATTCCGAACTTGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33070234 TATAACTTCGGTTCCTTAAAAG
195 TATAACTTCGATTCCTTAAAAC
* * *
33070256 ATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAAAATTCCATGCTC-GGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* **
33070320 TGGTCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATATTGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33070384 AGAATTGTTTCCCTCTTGGTTCTTGGATGAACTTTCGAAGTTCTCAAACTTTTA-GAAGTCCTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCTTT
*
33070448 TATAACTTCGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * * *
33070470 ATTGAAGACGATCCATTCCTTCCGGTAATTTTCCGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
** * * * * * *
33070535 TGGTCTAGGTAGTTT-TCCATTTTG-AAACATGTTTTGGT-TTGGGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * ** * * * *
33070597 TGAG-ATTTTTTATGC-CTTGATTCTAAGACGAACTTACAAACTTGTCAAACTTTTATGCGTTCT
129 TGAGAATTGTTTCT-CTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* * **
33070660 TTTGTAACTTCGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* ** * * * * * *
33070684 ATTCAAGATGATCCATTCCAACCAACAATGTTCCAAACATT-CATCCTTGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33070748 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33070813 AGAATTGTTTCTTTCTTGGTCCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33070878 ATAACTTC-AGTTCCTTCAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* ** * *
33070899 ATTCAAGACGA-CCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGACAAATGGCATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33070963 TGGTCTTAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTGTTTGAATTAAAAACTTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * *
33071028 GAGAATTGTTTCTCGCTAGGTTCTT-GACGAAATTCCGAACTTGTCAAAATTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * *
33071092 TATAACTTTGGTTCCTTAAAAG
195 TATAACTTCGATTCCTTAAAAC
* * *
33071114 ATTCAAGATGATCCATTCCTTCCAGCAATTTTCTGAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* **
33071179 TGGTCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTTTGAATT-AAAACATATATTGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33071242 AGAATTGTTTCCCTCTTGGTTCTTGGATGAACTTTCGAAGTTGTCAAACTTTTA-GAAGTCCTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCTTT
*
33071306 TATAACTTCGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * *
33071328 ATTGAAGATGATCCATTCCTTCCAGCAATTTTCCGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* ** * * * * *
33071393 TTGTCTAGGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGGGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * ** * *
33071456 TGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACGAACTTATCAAACTTTTACGCA-TTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCT
* **
33071519 TTTATAACTTCGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* ** * * * * *
33071543 ATTAAAGACGATCCATTCCTTCCAAAAATGTTCCAAACATT-CATCCTTGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33071607 TGATCCAAATAGTTTGTCATTTTGGAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33071672 AGAATAGTTTCTTTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTCCGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
33071737 ATAACTTC-AGTTCCTTAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* ** * * * ** *
33071758 ATTCAAGATGAT-CATTCCTTCCAGTGATTTTTCGAATATTCCATGCTAGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33071822 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33071887 AGAATTGTTTCCCCCTCGGTTCTTGGACGAAC-TTCTGAACATGTCAAACTTTTACAAGTTCTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTT
33071951 TATAACTTCGATTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * * * *
33071973 ATTCAAGACTATCCATTCCTTCCAGCAATTTTTCGAATATTCTATTCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33072038 TGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGCATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * *
33072103 AGAATTGTTTCTCGCTCGGTTCTTGGAAGAACTTCCGAACTTGTCAAACTTTCACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33072168 ATAACTTTGATTCCTAAAAAG
196 ATAACTTCGATTCCTTAAAAC
* * ** *
33072189 ATTCAAGATGATCCATTCCTT-TAGCAATTTTTTGAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33072253 TGGTGTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTCAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
** * * * * *
33072316 TGAGAATT-TTTAACCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTA-TATGCATT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGA-G--TT
* * **
33072379 -TTTTGATAACTTCAATTCCTTATAGT
191 CTTTT-ATAACTTCGATTCCTTAAAAC
* * * * * *
33072405 GTTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATT-CATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * ** *
33072469 TGATCCAAATGGTTTTGTCATTTTGTAAAGAAGTTTTATTCTTTGAATCAAAAACTTATATACGT
66 TGGTCTAAATAG-TTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
*
33072534 GCGAATTGTTTCTCTCTTGGTTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTACGAGTTCTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTT
33072598 TTATAACTTC-AGTTCCTTAAAAC
194 TTATAACTTCGA-TTCCTTAAAAC
* ** * *
33072621 ATTCAAGACAAT-CATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGACAAATCGCATCTTT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33072685 TGGTCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTCTGAATTAAAAACATATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * ** *
33072749 AGAATTGTTTCCCACTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTATAAGTCCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33072814 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * * *
33072835 ATTCAAGACGATCCATTCCTTCCAGTAACTTTCCAAAAATTCCATGCTCGGGAAATTGCAT-AGT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCA-T
* * * * * ** * *
33072899 TTGGTCTAAGTAGTTTTTCCATTTTGTAAAGAAGTTTCGGT-TTGAGAATTAAAGTCCTATTTAC
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATAC
* * * * * *
33072963 GTGATAATT-TTATC-C-CTTGATTCTAGGA-TAAGCTTACGAACTTGTCAAACTTTTACGCGTT
128 GTGAGAATTGTT-TCTCTCTTGGTTCTTGGACGAA-CTTTCGAACTTGTCAAACTTTTACGAGTT
* *
33073024 CTTTTATAACTTCGACTCC-TAATAC
191 CTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33073049 TATTAAAGACGATCCATTTCTTCGAACAATGTTCCTAACATTCCATCCTCGGGAAATCGCATCAT
1 -ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* *
33073114 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * *
33073179 GAGAATTGTTTCTCTCTTGGCTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGCTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33073244 TATAACTTC-AGTTCCATAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* ** ** *
33073266 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTATATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33073331 TGGTCTATATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33073396 AGAATTGTTTCTCTCGCTAGGTTCTTGGACGAAATTCCGAACTTGTCAAACTTTTACAAGTTTTT
131 AGAATTGTTTCTCT--CTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
**
33073461 TTATAACTTC-AGTTCCAGAAAAC
194 TTATAACTTCGA-TTCCTTAAAAC
* * * ** *
33073484 ATTCAAGATGATCCATTCCTTCTAGCAATTTTTCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33073549 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTCGAATTAAGAACTTATATAAGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33073614 AGAATTGTTTCTCACTCGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33073679 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
** * * * *
33073700 ATTCAAGACGATCCATTCCTTCCTTCAATTTTCTGAAAATTCCATGATCGGGAAATTACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33073765 TGGTCTAAGTAGTTAT-CCGTTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTAT-T-CG
66 TGGTCTAAATAGTT-TGTCATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * *
33073826 AGATAATT-TTTATCCCTTGATT-TTAGGACGAACTTACGAACTTGTCAAACTTTTAC-ACATTC
129 TGAGAATTGTTTCTCTCTTGGTTCTT-GGACGAACTTTCGAACTTGTCAAACTTTTACGA-GTTC
* **
33073888 TTTTATAACTTCGATTCCTTATAGT
192 TTTTATAACTTCGATTCCTTAAAAC
* * * * * ** *
33073913 ATTCAAGACGATCCATTCTTTCCAACAATGTTCCAAACATTCCATCCTCTTGAAATTGCATCTTT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33073978 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33074043 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCATACTTTTAAGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
33074108 ATAACTTC-AGTTCCTTAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * * * ** **
33074129 AATCAAGACGATCCATTTCTTCTAGCAATTTTTCGAACATTCCATGCTCGACAAATCACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33074194 TGTTCTAAATAGTTTGTTATTTTGTAAAAAAGTTTTGGTCCTTGAATTAAAAATTTATATAAGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33074259 AGAATTGTTTCTCACTCT-ATTCTTGGACGAGC-TTCTGAACTTGTCAAACATTTAC-ATGTTCT
131 AGAATTGTTTCTCTCT-TGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGA-GTTCT
* *
33074321 TTTATAACTACGGTTCCTTAAAAC
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * * *
33074345 ATTCAAGGCAATCCGTTCCTTCCGGCAATTTTTCGAACATTCAATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* ** * * * * * *
33074410 TGGTGTATGTAGTTTTTCATTTTGTAACCAAGTTTTGGT-TTGTAAATTAAAATCCTATTTACGT
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACGT
* * * * ** ** * *
33074474 G-GTAATTTTTAAATAAGTAGTTTTCCATTCCTTCCA-GCAATGTTTCGACATTCCATGCTCGAC
130 GAG-AATTGTT---T--CT-CTCTT-GGTT-CTTGGACG-AA-CTTTCGA-A---CTTG-TC-A-
* ** * * *** * * * *
33074537 AAATTGCATC-ATTTGGTCCAAAAAGTTTG--TCCTTTTGTAAAAA
177 AACTTTTA-CGAGTT-CTTTTATAACTTCGATTCC---T-TAAAAC
*** * ** ** ***** ** ** ** * * * *** *
33074580 AGTTTTGGTCTTTGAATTAAAAAC-TTATATAGGTGAGAATTATTTC-T-CTCTTGGTTCTTGGA
1 A-TTCAAGACGATCCATTCCTTCCAGCA-AT-TTTCCGAA-CATTCCATGCTC-GGGAAATTGCA
* * * * * * ** * ** ***
33074642 TGAACTTCGGAACATGTCAA-ACTTT-TACAAGTTCTTTTATAACTTCG-ATT-CCCTAAAACAT
61 T-CA-TTTGG----TCTAAATAGTTTGT-C-A-TT-TTGTA-AAC-AAGTTTTGGTCTTTGA-AT
* * * * * ** * ** * * * *
33074703 TCAAGAC-TATCCATTCCTTCCAGCAA-T-TTTCAGAATATTCCATGCTCGGA-AAATTGTATC-
113 TAAAAACTTAT--A-TACGT-GAG-AATTGTTTC--TCTCTT-GGTTCTTGGACGAACT-T-TCG
* * * * * * *
33074763 ATCTGGTCTAAGTAGTTTGT-C-A-TT-TTGTA-AACAAGTTTTGGTCTTTGCACTAAAAAC
168 AACTTGTC-AA--ACTTT-TACGAGTTCTTTTATAAC-----TTCG--ATT-C-CTTAAAAC
* ** ** * ** ** * *
33074820 TTATAT-AGGA-GA-GAATTGTTTTCTC-GC-----TCGGTTC-TTGGATGAACTTC-TGAACTT
1 --AT-TCAAGACGATCCATT-CCTTC-CAGCAATTTTCCGAACATTCCATG--C-TCGGGAAATT
* * * * ** * * ** * *
33074874 GTCA-AACTT--T-TACA-AG--T-TC-TTTTAT-AACTTCGGTTT--CCTTAAAACATTCAAGA
58 G-CATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC-AAGTTTTGGTCTT-TGA-ATTAAAAA
* * * * **** ** * ** * **
33074927 C-GATCCATTCCTTCTAGCAATT-TTTCGAAAATTGCATCATTTGGTCTAAGTAGTTTTCCATTT
119 CTTAT--A-TACGT-GAG-AATTGTTTC-TCTCTTGGTTC--TTGG---ACG-AACTTTCGAACT
* * * * * *
33074990 TGT-AAACAAGTTTT--G-GTT-TGTGAATTA-AAATCCTATTTACTTGATA-
172 TGTCAAAC---TTTTACGAGTTCT-T---TTATAACTTCGA-TTCCTTAAAAC
*** * ** * * ** * * * ** * *** **
33075036 ATT----TTTATCCCTTGATTCTAGGACGAGCTTACGAACTTGTCAAACTTTTACGCGTTCTTTT
1 ATTCAAGACGATCCATTCCTTCCA-G-CAATTTTCCGAACAT-TC-CA-TGCT-CGGGAAATTGC
* * * * * **** * * * ** ** **
33075097 ATAACTTCGATTCCT-TATAGTAT-TCAAGACG--ATCCATTTCTTCGAACAATG--TTCCAAAC
60 ATCA-TTTG-GT-CTAAATAGTTTGTCATTTTGTAAACAAGTT-TT-GGTCTTTGAATTAAAAAC
** * *** * * ** ** **
33075156 ATTCCAT-CCTCGAGAAATTGCAAC-AT-TTGG-TC-T-AAATAGTTTGTC-ATTTTGT-AAAC-
120 -TTATATACGT-GAG-AATTGTTTCTCTCTTGGTTCTTGGACGAACTT-TCGAACTTGTCAAACT
* * * *
33075212 ---A--AGTT-TTGT-T--CTTTGAAT--TAAAAAC
181 TTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* ** ** * ** * * **
33075237 -TT-ATATACG-TGAGAATTGTTTCTC-TCTTGGTTCTTGGACGAAC-TTCCGA-ACT-GTCAAA
1 ATTCA-AGACGAT--CCATTCCTTC-CAGC--AATT-TT--CCGAACATTCC-ATGCTCGGGAAA
** * * ** * * * * **
33075295 CTTTTA-CA--AGTTCTTTTATCACTTCGGT--TCTTGAAAAC-A-TTCAAGACGATCCATTCCT
56 -TTGCATCATTTGGTC-TAAAT-AGTT-TGTCATTTTGTAAACAAGTT-TTG--G-T-C--T--T
** * *** * * * * * * * * *
33075353 TCCAGTAATTTTCTGAATATTCCATGCTCGGGAAATTGTATC-AT-TAGG-TC-T--AAGTAGTT
108 TGAATTAA-AAACT-TATA-T--ACG-T-GAG-AATTGTTTCTCTCTTGGTTCTTGGACGAACTT
** * * * * ** *** * **
33075412 T-GTCATTTTGT-AAACAAGTTTA-G-GTCTACGCATTAAAAACTTATATAAGTGAGAATTG
165 TCG--AACTTGTCAAAC--TTTTACGAGT-T---CTTTTATAACTTCGATTCCTTA-AA-AC
* ** * * * * * * * * * * *****
33075470 TTTCTCGCTCGGTTC-TTGGACGAACTT-CTG-AACTTGT-CAAACTTTTACAAGTTCTTTTTAT
1 ATTCAAG-ACGATCCATT---C---CTTCCAGCAA-TTTTCCGAAC-ATTCCATGCTCGGGAAAT
** * *** ** ** * ** * ** * **
33075531 AACCTCAGTTCCATAAAACATTCAAG-ACGATCCATTCCTT-TCAGTAATTTTTCGAACATTCCA
57 TGCATCA-TTTGGTCTAA-A-T--AGTTTG-T-CATT--TTGTAAACAAGTTTT-GGTCTTTGAA
* ** * * * * * ** * *
33075594 TGCTCGACAAATGGCTTCAT-TTGGTCTA-AATAGTTTGT-TATT--TT-GTAAAC-AAGTTTTG
112 T--T--A-AAA--ACTT-ATATACGT-GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCG
** * * * * ** * *
33075652 GTCTTTGAATTAAAAACTTATATAGGTGAGAATT-GTTTCTCGC-TCGATTTCTTGGACGAAC
168 AAC-TTG---T-CAAACTT-T-TA--CGAG--TTCTTTTATAACTTCGATTCCTT--A-AAAC
* * ** * *** ** ** * ***
33075713 -TTC-TGAACTTGTTAAACTT--TTACAAGTTCTTTT-ATAAC-TTCGGTTC-CTTAAAACATTC
1 ATTCAAG-AC--GATCCA-TTCCTT-CCAGCAATTTTCCGAACATTCCATGCTC-GGGAA-ATT-
*** * * * * ** * * * *
33075771 AAGACGATCCATTCCTTC-CAGTAATTTTTCGAATATTCCATGCTCGAGAAATTGT-ATCATTTG
58 --G-C-AT-CATTTGGTCTAAATAGTTTGTC--AT-TT---TG-TAAACAAGTTTTGGTC-TTTG
** ** * * ** ** * ** *
33075834 GTTTAAGTAGTT-TGTCATTTTGTA-AACAAGTTT-TAGTCTAT-G--CATT--AAAAACTTATA
110 AATTAAAAACTTATAT-A-CGTG-AGAA-TTGTTTCT-CTCT-TGGTTC-TTGGACGAACTT-TC
* * * * * ** * * *
33075891 TAA---GTGAGAATTATTTCTCGCTCGATTCTTGGATGAACTTCCGA-ACTTGTCAAAC
167 GAACTTGTCA-AACT-TTT-ACG--AG-TTCTTTTAT-AACTT-CGATTCCT-TAAAAC
* * * * * ** * ** * * *
33075946 TTTTCAAAGTTCTTTCATAACTTTGGTTCCTTA-AAACATTCAAGACGATCCATTCC-TCCTTCA
1 -ATTC-AAG-AC---GAT-CCATTCCTTCC--AGCAATTTTC----CGA-ACATTCCATGC-TCG
* * * * * * *
33076009 GCAATTTTTCGAAT-ATTCCATGCTCGAGAA-A--TTGCATCATTTGGTCTAAGTAGTTTTCCA-
51 GGAA--ATT-GCATCATT---TGGTCTA-AATAGTTTG--TCATTT--TGTAA--A-----CAAG
* ** * ** **** * * * * * *
33076069 TTTTTGTAAACAAGTTTTGGTTTGTGAATTAAAATCCTATTTACGTGATAGTTTTTATCCCTTGA
98 TTTTGGT---C----TTT-GAAT-T-AA--AAACTTATATACGTGAGA-ATTGTTTCTCTCTTGG
* * * * * *
33076134 TTCTAGGACGAACTTACGAACTTGTCAAACTTTTACGGGTTCTTTTGTAAATTCGATTCCTTATA
150 TTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAA
**
33076199 GT
215 AC
* * * * *
33076201 ATTCAAGACGATCCA-TCCTTCCAAC-ATGTTCCAAACATT-CATCCTC-GGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33076262 TGATCCAAATAGTTTGTCATTCTGTAAAGAAGTTTTGTTCTTTGAA-TCAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* *
33076326 AAAATTGTTTCTTTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
33076391 ATAACTTC-AGTTCCTTAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * ** *
33076412 ATTCAAGGCGAT-CATTCCTTCCAGCAAATTTT-CGAACACTCCATGCTCGACAAATGGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGC-AATTTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * *
33076475 TTGGTCTAACTAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAACTTATATAGG
65 TTGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACG
* * * * *
33076540 TGAGAATTGTTTCTCGCTGGCTGATTATTGAACGAAC-TTCTGAACTTGTCAAACTTTGT-CAAG
129 TGAGAATTGTTTCTCTCT---TGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTT-TACGAG
* * *
33076603 TTCTTTTATAAGTTAGGTTCCCTTAAAAC
189 TTCTTTTATAACTTCGATT-CCTTAAAAC
* * * *
33076632 ATTCAAGGCAATCCATTCCTTCCAGCAATTTTCCAAAAATTCCATGCTC-GGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33076696 TGGCCTAAGTAGTTT-TCCATTTTGTAAAACAAGTTTTGGT-TTGTGAATTAAAATCTTATTTAC
66 TGGTCTAAATAGTTTGT-CATTTTGT-AAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATAC
* * * * * * *
33076759 GTGATAATT-TTATC-C-CTTGATTCTAGGACGAGCTTACGAACTTGTCAAAATTTTACGCGTTC
128 GTGAGAATTGTT-TCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTC
* **
33076821 TTTTATAACTTCGATTCCTTATAGT
192 TTTTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33076846 ATTCAAGATGATCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33076911 TGGTCTAAATAGTTTGTCATTTTGCAAACAAG-TTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * *
33076975 AGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAAATTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33077040 ATAACTTC-AGTTCCATAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * *
33077061 ATTCAAGACGATCCATTCCTTCAAGCAATTTTCCAAACATTCCATGCT--GGACAAATGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGA-AATTGCATCAT
*
33077124 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAAACTTATATAGG
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATT-AAAAACTTATATACG
* * * *
33077189 TGAGAATTG--TCTCGCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* *
33077252 TTATAACTT-AAGTTCCCTAAAAC
194 TTATAACTTCGA-TTCCTTAAAAC
* * * *
33077275 ATTCAAGACGATCCATTCCTTCCAGTAATTTTTCAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33077340 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * ** *
33077403 AGAGAATT-TTTATCCCTTGATTCTAGGTTGAACTTACGAACTTGTCAAACTTTTACGCA-TTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCT
** **
33077466 TTTATAACTTCGA-TCCTTCCAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * **
33077489 ATTGAAGACGATCCATTCCTTCCAACAA-TTTCCAAACATTCCATCCTCTTGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33077553 TGGTCTAAATAGTTTGTCATTTTGCAAAC-AGTTTTGTTCTTTGAATTAAAAACTTATATACCTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * *
33077617 GGAATTCTTTCTCTCTGGGTTCTTGGACTAAC-TTCTGAACTTGTAAAACTTTTAAGAGTTC-TT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTT
33077680 TATAACTTC-AGTTCCTTAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* * * * ** *
33077702 AATCAAGACGATCCATTTCTTTCTAGCAATTTTCCGAACATTCCATGCTTGACAAATCGCATCAT
1 ATTCAAGACGATCCA-TTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * *
33077767 TTGTTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCCTTGAATTAAAAACTTATATAGGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * *
33077832 GAGAATTGTTTCTCACTCT-GTTCTTGGACGAGC-TTCAAAACTTGTCAAACATTTAC-AGGTTA
130 GAGAATTGTTTCTCTCT-TGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGA-GTTC
* *
33077894 TTTTATAACTACGGTTCCTCCTTAAAAC
192 TTTTATAACTTC-GAT--TCCTTAAAAC
* * * *
33077922 ATTCAAGGCAATCCATTCCTTCCAGCAATTTTTCGAACATTCAATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* ** * *
33077987 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAGTCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * ** *** * *
33078050 TGATAAATT-TTTATCTAAGTAGTTTTTCCATTCCTTCCAGCAATGTTTCGACATTCCATGCTCG
129 TGA-GAATTGTTTCTCT--CT--TGGTT-C-TT--GGAC-G-AA-CTTTCGA-A---CTTG-TC-
* ** * ** ** * * * *
33078114 AAAAATTGCATC-ATTTGGTCCAAATAGTTTG--TCCTTTTGTAAAC
176 -AAACTTTTA-CGAGTTCTTTTATA-ACTTCGATTCC--TT-AAAAC
* * * ** ** * ** ** * * * ***
33078158 AAGTT--TG-TG-T-CTTTAAATTAAAACTTATATAGGTGAGAATTATTTC-T-CTCTTGGTTCT
1 -A-TTCAAGACGATCCATT-CCTTCCAGC--A-AT-TTTCCGAA-CATTCCATGCTC-GGGAAAT
* * ** ** * * ** * *
33078216 TGGATGAACT--TCCGAACA---TGTCAAACTTT-T--ACAAGTTCTTTTATAACTTCGATTCCT
57 TGCATCATTTGGTCTAAATAGTTTGTC--ATTTTGTAAACAAG-T-TTTGGT--CTTTGAAT--T
* * ** ** * ** * *
33078273 TAAAACATTCA-AGAC--GATCATTCCTTC-CAGCAATT--TTC-T-GAATATTCCATGCTCGGG
114 AAAAAC-TT-ATATACGTGAGAATTGTTTCTC-TC--TTGGTTCTTGGACGA--AC-T-TTC--G
* * * * * * * **
33078330 AAATTGT-ATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTG-GT-CTT--TGC
168 AACTTGTCA-AACTT--T-TACG-AG--T-TC-TTTTAT-AAC----TTCGATTCCTTAAAAC
* ** *** * * * * * *
33078388 ATT-AA-A-AATTTATATAGGT-GAG-AATTGTGTCTCG--C--TCGATTCTTCGATGAACTTCC
1 ATTCAAGACGATCCAT-TCCTTCCAGCAATT-T-TC-CGAACATTCCATGC-TCG-GGAAATTGC
* * * * * ** *
33078444 A-AACTT-GTC-AAACT--TTT-ACAAGTTCTTTTATAAC----TTCGGTTCCTTAAAACATTCA
60 ATCATTTGGTCTAAA-TAGTTTGTC-A-TT-TTGTA-AACAAGTTTTGG-T-CTT-TGA-ATTAA
* * * * * **** ** * * *
33078499 AGAC-GATCCATTCCTTCAAGCAATT-TTTCGAAAATTCCATGCTCGG--GAA-ATTC-AATCAT
116 AAACTTAT--A-TACGT-GAG-AATTGTTTC-TCTCTT-GGTTCTTGGACGAACTTTCGAA-C--
* * ** ***
33078558 TTGGTCTAAGTAGTTTTTAC--GTT-TTGTA-AAC-AAG-TT--TTGGTGA-
171 TT-GTC-AA--A-CTTTTACGAGTTCTTTTATAACTTCGATTCCTT-AAAAC
* * * **** * * *** *
33078601 ATT-AA-A--ATCCTATTTACGT-GAG-AATTTTTATCCCTTGATTCTAGGACGAACTTACGAAC
1 ATTCAAGACGATCC-A-TTCCTTCCAGCAA--TTT-TCCGAACATTC---CATG--CTCGGGAAA
* ** * * * * ** ** * *
33078660 TTGTCAAACATTTATGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAG--ACGATCCATT
56 TTG-C-ATCA-TT-TG-G-TC-TAAAT-AGTTTG--TCATT-TTGTAAACAAGTTTTGGT-CTTT
** ** *** *** **** * *
33078723 -CCTT-CCAAC--A-AT--GTTCCAA-ACATTCATC-CTTGGGAAATCG-C-ATCATTTGATCCA
109 GAATTAAAAACTTATATACGTGAGAATTGTTTC-TCTCTTGGTTCTTGGACGA--ACTT--T-C-
* * * * *** * * * *
33078777 AATAGTTTGTC--ATTTTGTA-AAGAAGTTTTGT--CTTTGAAT-C-AAAAAC
167 GA-A-CTTGTCAAACTTT-TACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
** *** * ** * * * * **
33078823 GTATATACGTGA-GAATTTTTTTCTTCTTG--GTTCTTGGACGAAC-TTCCGA-ACTTGTCAAAC
1 --AT-T-CAAGACG-ATCCATTCCTTCCAGCAATT-TT--CCGAACATTCC-ATGCTCGGGAAA-
** * * ** * * * * * * * ** ***
33078883 TTTTATGA-GTCCTTTATA-ACTTCAGTTCCTTATG-ACATTCAAGACGATCATTCCTTCTAGCA
56 TTGCATCATTTGGTCTAAATAGTT-TG-TCATTTTGTA-A-ACAAG--TTTTGGT-CTT-T-G-A
* * ** * * * * * ** **
33078945 ATTTTTCGAACAC-TCCATGC-TCGACAAATG--GCATCAT-TTGG-TC-T-AAATAGTTTGTC-
111 A---TT-AAAAACTTATATACGT-GAGAATTGTTTC-TC-TCTTGGTTCTTGGACGAACTT-TCG
** * * *** ** * **
33079001 ATTTTGTAAAACAAGTTTT--G-G-TCTTTGAATTAAAAACGTATATAGGTGAGAATT
168 AACTTGTCAAAC---TTTTACGAGTTCTTT-TA-TAACTTCG-AT-T-CCTTA-AAAC
* * ** * * * ** ** *** **
33079055 ATTC---TCG-CCCGATT-CTTGGA-CGAACTTT-CGAACTTGTCAAACTTTTACAAGTTCTTTT
1 ATTCAAGACGATCC-ATTCCTTCCAGC-AATTTTCCGAACAT-TC-CA-TGCT-CGGGAAATTGC
* * ** ** ** * * * ** *
33079113 ATAACTTAGGTTCCTTAAA-A-CAT-TCA--AGGCGATCCA-TTCCTTCCAG-CATTTTCA-GAA
60 ATCA-TTTGG-T-C-TAAATAGTTTGTCATTTTGTAAACAAGTT--TT--GGTC-TTTGAATTAA
* * * * ** * * * ** * **
33079170 AATC-CATGCT-CGGGA-AATTGCATC-AT-TTGG--CCT--AAGTAGTTTTCCATTTTGT-AAA
116 AAACTTAT-ATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACG-AACTTTCGAACTTGTCAAA
* * * * * * *
33079225 CAAGTTTT--G-GTT-TGTGAATTA-AAATCCTATTTACGTGATAAT
179 C---TTTTACGAGTTCT-T---TTATAACTTCGA-TT-CCTTAAAAC
* * *** * ** * * ** ** * * * ***
33079267 TTTTATCCCTTGATTCTAGGACGAGCTTAC-G-AACTTGTCAAAATTTTACACGTTCTTTATAAT
1 ATTCAAGAC--GA-TCCA-TTC---CTTCCAGCAA-TTTTCCGAACATTCCATGCTCGGGA-AAT
* * * ** * * ***** * **
33079330 TTCGATTCATTATAGTATTCA-AG-ATGATCCATTTCT-TCGAACAATGTTCCAAACATTCCATC
57 TGC-A-TCATT-TGGTCTAAATAGTTTG-T-CATTT-TGT-AAACAA-GTTTTGGTCTTTGAAT-
* * ** ** * * * * ** * * **
33079392 CTCGGGAAATCGCATCATTTGGTCTA-AATAGTTTGTCAT-TT--TGC--AAAC-AAGTTTTGGT
113 -T---AAAAACTTAT-A-TACGT-GAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACTTTCGAA
* * * * ** *
33079450 CTTTGAATTAAAACTTATATAGGTGAGAATT-GTTTCTCGC-TCGATT-CTTGGACGAAC
170 C-TTG---TCAAACTT-T-TA--CGAG--TTCTTTTATAACTTCGATTCCTT--A-AAAC
* ** ** *** * ***
33079507 -TTC-CGAACTTG-T-CA-AACTTTTA-CAAGTTCTTTTATAAC-TT-CA-GTTCCATAAACATT
1 ATTCAAG-AC--GATCCATTCCTTCCAGCAA--T-TTTCCGAACATTCCATGCT-CGGGAA-ATT
*** * ** * ** *
33079563 CAAGACGATCCATTCCTTC-AAGCA-ATTTTCCAAACATTCCATGCTGGACAA---ATGGCATCA
58 ---G-C-AT-CATTTGGTCTAA--ATAGTTT---GTCATT--TTG-TAAACAAGTTTTGG--TC-
* ** * *** * ** * * ** **
33079623 TTTG-GTCTAAATAGTTTGTCATTTTTTA-AACAAGTTT-TGGTCTTTG-AATT--AAAAACTTA
106 TTTGAAT-TAAA-AACTTAT-ATACGTGAGAA-TTGTTTCT-CTCTTGGTTCTTGGACGAACTT-
** ** ** * ** * * * * *
33079682 T--ATAGGTGAGAATTGTTTCTTGCTTGA-TTCTTGGACGAACTTCGA-ACTTGTCAAGC
165 TCGA-ACTTGTCAA--ACTT-TTAC--GAGTTCTTTTA-TAACTTCGATTCCT-TAAAAC
* * * * * ** * *** * * *
33079738 TTTTACAAGTTCTTTTATAACTGAGGTTCCCTAAAAC-ATTCAAGGCGATCCATTCC-TTC-CAG
1 -ATT-CAAG-AC---GAT--C-CA--TTCCTTCCAGCAATT--TTCCGA-ACATTCCATGCTCGG
* * * * * *** * ***** **
33079800 CAATTTTCCAAACATTCAATGCTCGGGA-A--TTGCATCATTTGGTCTTTGTAGTTTTCCAT-TT
52 GAA-ATTGC-ATCATT---TGGTCTAAATAGTTTG--TCATTTTGT-AAACAAGTTTT-GGTCTT
* ** * **** * * **
33079861 TG---TAAACAAGTT-T-TGATTTGTGAATTAAACCATC-CTAT--TTACGT-GA-TAA-TTTTT
108 TGAATTAAA-AACTTATAT-ACGTGAGAATTGTTTC-TCTCT-TGGTT-CTTGGACGAACTTTCG
* * * ** * * * *
33079915 ATCCCTAGATTCTAGGACGAGCTTACGA--ACTTGTTA-AACTTTTACGCGTTCGTTTATAAC
168 A--ACTTG--TC-A-AAC--TTTTACGAGTTCTT-TTATAAC--TT-CG-ATTC-CTTAAAAC
* * * ** ** **** * * ** *
33079975 -TTC--TA--TTCCTTATAGTATGAAG-AGATCCATTTCTTCCCA--CAATGTTC-CAAACATTC
1 ATTCAAGACGATCCAT-TCCT-TCCAGCA-AT---TTTCCGAACATTCCATGCTCGGGAA-ATTG
* ** ** * ** *
33080031 CATCCTCGGGAAATC-GCATAATTTGGTCTAACTAGTTTTGTCATTTTGTAA-ACAAGTTTTGT-
59 CATCATTTGG---TCTAAATAGTTT-G--T--C-A-TTTTGT-A------AACA-AGTTTTGGTC
** * * ** *** * * * * **
33080093 TCTTTGAATTAAAAACT-TATATACGTGAGAAT-TGTT-TCTCTCTGGGT-TCTTG--GACGAAC
106 T-TTGAATTAAAAACTTATATACGTGAGA-ATTGT-TTCTCTCT-TGGTTCT-TGGACGA--ACT
* * *
33080152 TTCGAACTTGTCAAACTTTTATGAGTTCTTTTACAACTTC-ATTTCCTTAAAAT
164 TTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * **
33080205 GTTCAAGATGATCCATTCCTTCCAGCAATTTTTCG-ACATTCCATGCTCGACAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33080269 TGGTCCAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACGTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33080334 AGAATTGTTTCTCTCTCTTGGTTTCTTGGATGAACTTCCGAACATGTCAGACTTTTACAAGTTCT
131 AGAATTG-TT-TCTCTCTTGG-TTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
*
33080399 TTTATAACTTCGGTTCCTT-AAAC
193 TTTATAACTTCGATTCCTTAAAAC
* * **
33080422 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGTGTCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * **
33080487 TGGTCTAAGTAGTTTGTCATTTTGT-AACTAGTTTTTTTTCTTTGAATTAAAAACTTATATACGT
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAG-TTTTGGTCTTTGAATTAAAAACTTATATACGT
* * *
33080551 GAGAATTGTTTCTCTCTGGGTTCTTGGACGAACTTTCGAACGTGTCAAACTTTTATGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33080616 TACAACTTC-ATTTCCTTAAAAT
195 TATAACTTCGA-TTCCTTAAAAC
*
33080638 ATTCAAGATGATCCATTCCTTCCAGCAAATTTT-CG-ACATTCCATGCTC--GACAATTGCATCA
1 ATTCAAGACGATCCATTCCTTCCAGC-AATTTTCCGAACATTCCATGCTCGGGA-AATTGCATCA
* * * *
33080699 TTTGGTCCAAATAGTTTGTCATTTTGT-AACAACTTTTGGTCTTTGAATTAAAAACGTATATAGG
64 TTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACG
* * * *
33080763 TGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
*
33080828 TTATAACTTCGGTTCCTTAAAAC
194 TTATAACTTCGATTCCTTAAAAC
* * *
33080851 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33080916 TGGTCTAATTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGCATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * * *
33080981 AGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCAAACTTGTCAAACTCTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33081046 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * *
33081067 ATTCAAGACGATCCATTTCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33081132 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * *
33081195 TGAGAATTTTTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACATTTACGCGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* *
33081260 TTATAACTTCGATTCCTTATAAT
194 TTATAACTTCGATTCCTTAAAAC
* * * * **
33081283 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATT-CATCCT-GGGAAATCACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33081346 TGATC-CAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACGTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
*
33081410 AGAATTGTTTTTCTTTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
131 AGAATTG--TTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
*
33081475 TCATAACTTC-AGTTCCTTAAAAC
194 TTATAACTTCGA-TTCCTTAAAAC
* ** * ** *
33081498 ATTCAAGACGAT-CATTCCTTCTAGCAATTTTTTGAACACTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33081562 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTCAATTAAAAAATTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* *
33081627 AGAATTGTTTCTCGC-TGGATTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTGT-CAAGTTCT
131 AGAATTGTTTCTCTCTTGG-TTCTTGGACGAACTTTC-GAACTTGTCAAACTTT-TACGAGTTCT
* * *
33081689 TTTATAACTTAGGTTTCTTAAAAC
193 TTTATAACTTCGATTCCTTAAAAC
* * * * *
33081713 ATTCAAGTC-ATCCATTCCTTCCAGTAATTTTCCAAAAATTCCATGCTCGGTAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33081777 TGGTCTAAGTAGTTT-TCCATTCTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * * *
33081840 TGATAATT-TTTATCCCTTGATTCTAGGACGAGCTTAT-GAACTTGTCAAAATTTTACGCGTTCC
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTT-TCGAACTTGTCAAACTTTTACGAGTTCT
* **
33081903 TTTATAACTTCGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * * * * * *
33081927 ATTCAAGACGATCCATTTCTTCGAACTATGTTCCAAACATTCCATCCTCGGGAAATCGTAACATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33081992 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATT-AAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33082056 AGAATCGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* *
33082121 ATAAATTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * * * *
33082142 ATTCAAGAGGATCCATTCCTTCCAGCAATTTTCTGAATATTCTATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33082207 TGGACTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATGCATTAAAAACTTATATAAGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * * * *
33082272 AGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCGAACTTGCCAAACCTTTACAAGTTCTTTC
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* *
33082337 ATAACTTTGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * * *
33082358 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAATATTCCATGCTCGAGAAATTGGATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33082423 TGGTTTAAGTAGTTT-TCCATTTTCTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * * **
33082486 TGATAGTT-TTTATCCCTTGATTCTAGGATGAACTTACGAACTTGTCAAACTTTTACGCTTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* **
33082550 TTATAACTTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * *
33082573 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATT-CATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33082637 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATGCGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * *
33082702 AGAATTGTTTCTTTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGATCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33082767 ATAACTTC-AGTTCCTCAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * * * * * ** *
33082788 ATTCGAGACGAT-CATTCCTTCTAGCAATTTTTCGGACACTCCATGCTTGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33082852 TGATCTAAATAGTTTGTCATTTTGAAAAACAAGTTTTGGTCTTTGAATTAAGAACTTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTG-TAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * *
33082917 GAGAATTGTTTCTCGCTCGATTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33082982 TATAACTTAGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * *
33083004 ATTCAAGGCGATCCATTCCTTCCACCAATTTTCTGAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33083069 TGGT-TAAAGTAGTTT-TCCATTTTGCAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTAC
66 TGGTCTAAA-TAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATAC
* * ** * * * *
33083131 GTGATAATT-TTTAT-TCCTTCATTCTAGGACGAGCTTACGAACTTGTCAAAATTTTAC-ACGTT
128 GTGAGAATTGTTTCTCT-CTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGA-GTT
* **
33083193 CTTTTATAACTTCGATTCCTTATAGT
191 CTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * * *
33083219 ATTGAAGATGATCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33083284 TGGTCTAAATAGTTTGTCATTTTGCAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33083349 AGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33083414 ATAACTTC-AGTTCCATAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * * * *
33083435 ATTCAAGACGATCAATTCCTTCAAGCAATTTTCCAAACATTCCATGC-CGGACAAATGGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGG-GAAATTGCATCAT
* *
33083499 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTGTTTGAATT-AAAACTTATATAGGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * *
33083563 GAGAATTG-TTATCGCTTGATTCTTGGACGAACTTCCGAACCTGTCAAACTTTTATGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * *
33083627 TACAACTTC-ATTTCTTTAAAAT
195 TATAACTTCGA-TTCCTTAAAAC
* * * **
33083649 GTTCAAGATGATCCATTCCTTCCAGCAATTTTTCG-ACATTCCATGCTCGACAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33083713 TGGTCCT-AATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACGTATATAGGT
66 TGGT-CTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * *
33083777 GAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33083842 TATAACTTCGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* ** * *
33083864 ATTCAAGATGATCCATTCCTTCCAGCAATTTTTTGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33083929 TGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGCATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * * *
33083994 AGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCAAACTTGTCAAACTCTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33084059 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* *
33084080 ATTCAAGACGATCCATTCCCTTCCAGCAATTTTCTGAATATTCCATGCTC-GGAAATTGCATCAT
1 ATTCAAGACGATCCATT-CCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * *
33084144 TTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTAC
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATAC
* * * * * * *
33084207 GTGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACATTTACGCGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* **
33084271 TTTATAACTTCGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * *
33084295 ATTC-AGATGATCCATCCTTCCTTCCA-CAATGTTCC-AAAATT-CATCTCTCGGGAAATT-CAT
1 ATTCAAGACGATCCA---TTCCTTCCAGCAATTTTCCGAACATTCCAT-GCTCGGGAAATTGCA-
* * *** *
33084355 TTGAATATTTTGAT-TCAAAT-GTTT-TCAATTTATGT-TTTAAG--TT--TCTTT-TATTCAAA
61 -T---CA-TTTGGTCT-AAATAGTTTGTC-ATTT-TGTAAACAAGTTTTGGTCTTTGAATT-AAA
* * *
33084411 AACGTATA-ACGTGAGAATTATTTCTTTCTTGGTT-TGTGACGAACGAGACTTTCGAACTTGTC-
117 AACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCT-TG--G-ACGA-ACTTTCGAACTTGTCA
*
33084473 -ACTTTTACGAGTTCTTTCATAACTTC-AGTTCCTTAAAAC
177 AACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * ** *
33084512 ATTCAAGACGAT-CATTCCTTCTAGCAATTTTTCGAACACTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33084576 TGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAAATTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * *
33084641 GAGAATTGTTTCTCGC-TGGATTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTTCAAGTTCT
130 GAGAATTGTTTCTCTCTTGG-TTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCT
* *
33084704 TTTATAACTTAGGTTCCTTAAAAC
193 TTTATAACTTCGATTCCTTAAAAC
* * * *
33084728 ATTCAAGGCAATCCATTCCTTCCAGCAATTTTCCAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33084793 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTCTGTGAATTAAAATCCTATTTACGT
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * * * * *
33084857 GATAATT-TTTATCCCTTGATTCTAGGACGAGCTTAT-GAACTTGTCAAAATTTTACGCGTTCCT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTT-TCGAACTTGTCAAACTTTTACGAGTTCTT
* **
33084920 TTATAACTTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33084943 ATTCAAGACGATACATTTCTTCGAACAATGTTCC-AACATTCCATCCTCGGGAAATCGCAACATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
*
33085007 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATT-AAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* *
33085071 AGAATCGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTC
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33085136 ATAACTTC-AGTTCCTTAAAAG
196 ATAACTTCGA-TTCCTTAAAAC
* * * ** *
33085157 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTCCTTGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33085221 TGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAAATTACATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * *
33085286 TAGAATTGTTTCTCGC-TGGATTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTTCAAGTTCT
130 GAGAATTGTTTCTCTCTTGG-TTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCT
* *
33085349 TTTATAACTTAGGTTCCTTAAAAC
193 TTTATAACTTCGATTCCTTAAAAC
* * * * *
33085373 ATTCAAGGCAATCCATTCCTTCCAACAATTTTCCAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33085438 TGGTCTAAGTAGTTT-TCCATTTAGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTAGG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * *
33085501 TGATAATT-TTTATC-CTTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTAACGCGTTCT
129 TGAGAATTGTTTCTCTC-TTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* **
33085564 TTTATAACTTCGATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * * ** *
33085588 ATTCAAGATGATCCATTCCTTCCAACAATGTTCCAAATATT-CATCCTCGGGAAATCACATCAGT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * ** *
33085652 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTTGTTCTTTGAATCGAAAACCT-TATACGT
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAG-TTTTGGTCTTTGAATTAAAAACTTATATACGT
* *
33085716 GAGAATTGTTTCTTTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTATGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33085781 CATAACTTC-AGTTCCTTAAAAG
195 TATAACTTCGA-TTCCTTAAAAC
* * * ** *
33085803 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTCCTTGCTCGTCAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33085867 TGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAAATTACATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * *
33085932 TAGAATTGTTTCTCGC-TGGATTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTTCAAGTTCT
130 GAGAATTGTTTCTCTCTTGG-TTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCT
* *
33085995 TTTATAACTTAGGTTCCTTAAAAC
193 TTTATAACTTCGATTCCTTAAAAC
* * * * *
33086019 ATTCAAGGCAATCCATTCCTTCCAACAATTTTCCAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33086084 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTAGG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * *
33086147 TGATAATT-TTTATC-CTTTGATCCTAGGACGAGCTTACGAACTTGTCAAACTTTTACGCGTTCT
129 TGAGAATTGTTTCTCTC-TTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* * **
33086210 TTTATAACTTCAATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33086234 ATTCAAGACGATCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTTGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33086299 TGGTCTAAATAGTTTCTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGCG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* *
33086364 AGAATTGTTTCTCTCTTGGTTCTTGGACGAGCTTTCGAACTTGTCAAACTTTTACAAGTTCATTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTC-TTT
*
33086429 TATAACTTC-AGTTCCATAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* ** *
33086451 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCC-AACATTCCATGCTTGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33086515 TGGTCTCAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * *
33086580 AGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTG
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* *
33086645 ATAACTTAGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * * * * * *
33086666 TTTCAAGGCGATCCATTCCTTCAAGCAATTTTTCAAACATTCAATGCTTGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33086731 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TAGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCT-TTGAATTAAAAACTTATATACG
* * * * * * * * *
33086794 TGATAATT-TTTATC-CTAGATTCTAGGATGAGCTTACGAACTTGTCAAACTTTTACGCGTT-TG
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT-
* * * * **
33086856 TTTATCACTTCTATTTCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * * * * *
33086880 ATTGAAGACGATCCATTTCTTCAAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33086945 TGGTCTAACTAGTTTGTCATTTTGTAAACAAGTTTTGCTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33087010 AGAAAAT-TTTCTCTCTGGGTTCTTGGACGAACTTTCAAACTTGTCAAACTTTTAGGAGTTCTTT
131 AG-AATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33087074 TATAACTTCGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * * *
33087096 GTTCAAGACGTTCCATTCCTTCCAACAATTTTCTGAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33087161 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * *
33087224 TGAGAATT-TTATC-C-CTTGATTCTAGGACGAACTTAT-GAACTTATCAAACTTTTACGCA-TT
129 TGAGAATTGTT-TCTCTCTTGGTTCTTGGACGAACTT-TCGAACTTGTCAAACTTTTACG-AGTT
* **
33087284 CTTTTATAACTTCGATTCCTTATAGT
191 CTTTTATAACTTCGATTCCTTAAAAC
* * * * *
33087310 GTTCAAGACGATCCATTCCTTCCAAC-ATTGTTCCAAACATTCCATCCTCGGGAAATTGTATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATT-TTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * * * *
33087374 TTGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATGCGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* ** *
33087439 GAGAATTATTTCTCTCTTGGTTCTTGGAATAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
33087504 TATAACTTC-AGTTCCTTAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
** *
33087526 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33087590 TGGTCTACATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAACTTAAATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* *
33087655 GAGAATTGTTTC-CCCTCGGTTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTACGAGTTCTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTT
* *
33087718 TCATAACTTC-AGTTCCTTAAAAG
194 TTATAACTTCGA-TTCCTTAAAAC
* * * * ** *
33087741 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTCCTTGCTTGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33087805 TGGTCTAAATAGTTTGTCATTTTGTAATACAAGTTTTGGTCTTTCAATTAAAAAATTACATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGTAA-ACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * *
33087870 TAGAATTGTTTCTCGC-TGGATTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTTCAAGTTCT
130 GAGAATTGTTTCTCTCTTGG-TTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCT
* *
33087933 TTTATAACTTAGGTTCCTTAAAAC
193 TTTATAACTTCGATTCCTTAAAAC
* * * *
33087957 ATTCAAGGCAATCCATTCCTTCCAACAATTTTCC-AAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33088021 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTCTGTGAATTAAAATCCTATTTAGGT
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * * * *
33088085 GATAATT-TTTATC-CTTTGATTCTAGGACGAGCTTACGAACTTGGCAAACTTTTACGCGTTCTT
130 GAGAATTGTTTCTCTC-TTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * **
33088148 TTATAACTTCAATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * *
33088171 ATTCAAGACGATCTATTTCTTCGAACAATGTTCCAAACATTCCATCCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33088236 TGGTCTAAATAGTTTCTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGCG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* *
33088301 AGAATTGTTTCTCTCTTGGTTCTTGGACGAGCTTTCGAACTTGTCAAACTTTTACAAGTTCATTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTC-TTT
*
33088366 TATAACTTC-AGTTCCATAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* * ** *
33088388 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTTCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33088453 TGGTCTCAATAGTTTCTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33088518 AGAATTGTTTCTCGCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* *
33088583 ATAACTTAGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * * * * *
33088604 TTTCAAGGCGATCCATTCCTTCAAGCAATTTTTCAAACATTCAATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33088669 TGGTCTAAGTAGTTT-TCCATTTT-TAAACAAGTTTTGGT-TAGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCT-TTGAATTAAAAACTTATATACG
* * * * * * * * * * * *
33088731 TGATAATTTTTTATCCCTAGATTCTAGGATGAGCTTACGAACTTGTCAAACTTTTACGTGTTTGT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAG-TTCT
* * * * **
33088796 TTTATCACTTCTATTTCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * * * * ** *
33088820 ATTGAAGACGATCCATTTCGT-CAACAATGTTCCAAACATTCTATCCTC-GGAAATCACATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33088883 TGGTCTAACTAGTTTGTCATTTTGTAAACAAGTTTTGCTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33088948 AGAAAAT-TTTCTCTCTGGGTTCTTGGACGAACTTTCAAACTTGTCAAACTTTTAGGAGTTCTTT
131 AG-AATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33089012 TATAACTTCGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * *
33089034 GTTCAAGACGTTCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33089099 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * *
33089162 TGAGAATT-TCTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTACGCGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* **
33089226 TTATAACTTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * *
33089249 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33089314 TGGTCTAAATAGTTTCTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33089379 AGAATTGTTTCTCTCTCTGGTTCTTGGAAGAACGTCCGAACTTGTCAAACTTTTAAGAGTTCTTT
131 AGAATTGTTTCTCTCT-TGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* *
33089444 TATAACTTC-AGTTCGTTAAAAT
195 TATAACTTCGA-TTCCTTAAAAC
* * * ** *
33089466 AATCAAGACGATCCATTCCTTCTAGCAATTTTCTGAACATTCCATGCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33089531 TGTTCTAAATAGTTTGTTACTTTGTACACAAGTTTTGGTCCTTGAATTAAAACCTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * * *
33089596 AGAATTATTT-TGCACTCGATTCTTGGACGAAC-TTCTGAACTAGTCAAACATTTACAAGTTCTT
131 AGAATTGTTTCT-CTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTT
*
33089659 TTATAACTTCGGTTCCTTAAAAC
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * *
33089682 GTTCAAGACAATCCATTCCTTCCAGGAATTTTCTGAATATTCCATGCTCGGGAAATTGTATTATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33089747 TGGTTTAAGTTGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGCATTAAACACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * **
33089812 AGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACTTGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* **
33089877 ATAGCTTTAATTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* ** * *
33089898 ATTCAGGACGATCCATTCCTTCCAGCAATTTTTTGAAAATTCCATGCTCCGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33089963 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTATG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * * * * *
33090026 TGATAATT-TTTATCCCTAGATTCTAGGATGAGCTTACGAACTTGTCAAACTTTTACGCGTTCAT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * **
33090090 TTATAACTTCTATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * * * * *
33090113 ATTGAAGACGATCCATTTCTTCCAACAATGTTCCAAACATTCCATCCTCAGGAAATCGCATAACT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33090178 TGGTCTAACTAGTTTGTCATTTCGTAAACAAGTTTTGTTCTTGGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * ** * * *
33090243 AGAA-AGTTTTCTCTCTGGGTTCTTGGATAAACTTTCAAATTTGTCAAACTTTTAGGAGTTCTTT
131 AGAATTG-TTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33090307 TATAACTTCGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * *
33090329 ATTCAAGATGTTCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33090394 TGGTCTAAGTAGTTT-TCCATTTTCTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * *
33090457 TGAGAATT-TTTATCCCTTGATTCTAGGA-GAACTTACGAACTTGTCAAACTTTTAAGCGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* ****
33090520 TTATAACTTCGATGCCTTATCGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * **
33090543 ATTCAAGACGATCCATTCCTTCCAAC-TTTGTTCCAAACATTCCATCCTCGGGAAATCACATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATT-TTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * * * * * *
33090607 TTGATCCATATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATGAAACACTTATATGCGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* *
33090672 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
33090737 TATAACTTC-AGTTCCTTAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
** *
33090759 ATTCAAGACGAT-CATTCCTTCCAGC-ATTTTCCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33090822 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTGTTTGAAGTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * * *
33090887 AGAATTGTTTCTCGCTCGATTCTTGGACGAAATTTTGAACTTTTTCACTTCTCAAACTTTTACAA
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCG-A-------ACTTGTCAAACTTTTACGA
* *
33090952 GTTCTTTTATAACTTC-AGTTTCATAAAAC
188 GTTCTTTTATAACTTCGA-TTCCTTAAAAC
*
33090981 ATTCAAGACGATCCATTCCTTTCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33091046 TGGTCTCAATAGTTT-TGCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * ** * * * *
33091109 TGATAATT-TTTATCCCTAGATTCGAGGACGAGCTTACAAACTTGTCAAACTTTTAC-ACGTTCG
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGA-GTTCT
* * **
33091172 TTTATAACTTCTATTCCTTATAGT
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * * *
33091196 ATTCAAGACGATCCATTTCTTCCAACAATGTTCCAAACATTCCATCCTCAGGAAATTGCATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * **
33091261 TGGTCTAACTGGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATTGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * *
33091326 AGAATTGTTTCTCTCTGGGTTATTGGACGAACTTTCAAACTTGTCAAACTTTTCCGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* *
33091391 ATAACTTTGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * * *
33091412 GTTCAAGACGTTCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33091477 TGGTCTAAGTAATTT-TCCATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAATCCTATTTACGT
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * ** *
33091541 GAGAATT-TTTATCCCTTGATTCTAGGAAAAACTTACGAACTTGTCAAACTTTTAC-ACGTTCTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGA-GTTCTT
* * **
33091604 TTATAGCTTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * ** * * *
33091627 GTTCAAGACGATCCAATCCTTCCAAAAATGTT-CGAAACATTCCATCCTC-GGAAATTACATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCG-AACATTCCATGCTCGGGAAATTGCATCAT
* * * * *
33091690 TTGATCCAAATAGTTTGTCATTTTGTAAAGAAG-TTTGTTCTTTGAATCAAAAACTTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
*
33091754 GAGAATTGTTTCTCTCTTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTT
130 GAGAATTGTTTCTCTC-TTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
33091819 TTATAACTTC-AGTTCCTTAAAAC
194 TTATAACTTCGA-TTCCTTAAAAC
** ** *
33091842 ATTCAAGACGATCCATTCCTTCCAGCAATTTTATGAACATTCCATGCTCGTCAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33091907 TGGTCTATATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * ** *
33091972 AGAATTGTTTCTCGCTCGATTCTTGGA-TAAAGTTCTGAACTTGTCAAACCTTTAC-ATGTTCTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGA-GTTCTT
33092035 TTATAACTTCTG-TTCCTTAAAAC
194 TTATAACTTC-GATTCCTTAAAAC
* * *
33092058 ATTCAAGACAATCCATTCCTTCCAGCAATTTTCCGAACATTCCATACTCGGGAAATTGCATCGTT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33092123 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTATGCT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * * * * *
33092186 TGATAATT-TTTAT-TCCCTGATTCTAGGACGAGCTTAC-AAATTGTCAAACTTTTACGCA-TTT
129 TGAGAATTGTTTCTCT-CTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTC
* * **
33092247 TTTTA-AACTTCTATTCCTTATAGT
192 TTTTATAACTTCGATTCCTTAAAAC
* * * * * * * * *
33092271 ATTCAAGATGATCCATTTCTTCGAAC-ATTGTTGCAAACATTCCATCCTCGGGAAATCGTATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATT-TTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * * *
33092335 TTGGTCTAAATAGTTTGTCACTTTGTAAATAAGTTTTGTTCTTTTAATTAAAAACTTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * *
33092400 GAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACGAGTTGTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
33092465 TATAACTTC-AGTTCCTTAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* * * *
33092487 ATTCAAGATGAT-CATTCCTTCCAGCAATTTTCCGAACA-T-CAT--TTGGTCTAAA-T--A--G
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGG--GAAATTGCATCA
** *
33092542 TTT-GTC---AT--TTTGT-A------AACA-AGTTTT-GGTCTTTGAATTAAAAACTTATATAG
64 TTTGGTCTAAATAGTTTGTCATTTTGTAA-ACAAGTTTTGGTCTTTGAATTAAAAACTTATATAC
* * * * * * *
33092592 GTGAGAATTGTTTCTCGCTCT-GTTGTTGGATGAACTTCCAAACCTGTCAAACTTTTACGAGTTA
128 GTGAGAATTGTTTCTCTCT-TGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTC
*
33092656 TTTTATAACTTC-AGTTCCTTAAACC
192 TTTTATAACTTCGA-TTCCTTAAAAC
* * * * * ** *
33092681 ATTCAAGACTATCCATTCCATCCAGTAATTTTTCGAACATTCCATTCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33092746 TGGCCTAAATAGTTTGTCATTTCGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33092811 AGAATTGTTTGC-CTCTTGGTTCTTGGATGAACTTCCAAATTTGTCAAACTTTTACAAGTTCTTT
131 AGAATTGTTT-CTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33092875 TATAACTTCGGTTCCTTAAAAC
195 TATAACTTCGATTCCTTAAAAC
* * * * *
33092897 ATTCAAGACGATCCATTCCATCTAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33092962 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * *
33093025 TTAGAATT-TTTATCCCTTGATTCTCGGACGAACTTAT-GAACTTGTCAAACTTTTACGTGTTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTT-TCGAACTTGTCAAACTTTTACGAGTTCT
*
33093088 TTTATAACTTCGATTCCTT-ATAC
193 TTTATAACTTCGATTCCTTAAAAC
* * * * * *
33093111 AATTCAAGATGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCAT
1 -ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
** ** * * * *
33093176 TTTATCCCAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAAATTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * *
33093241 AAGAATTGTTTCTCCCTTGGTTCTTGGACGAACTTCCGAACTCGTCAAACTTTTACGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
33093306 TATAACTTC-AGTTCCTTAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* *** ** *
33093328 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAACAAAAGGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33093392 TGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* ** * * * * *
33093457 AGAATTATTTCTCGATCGGTTCTTGGATGAACTTCCGAACTTCTCAAACTTTTACAAGTTC-TTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
33093521 -TAACTTCGATTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
** *
33093541 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTTGAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33093606 TGGTC-AAGTGGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTACAATCCTAGT-TAA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTA-TATAC
* * * * * * *
33093667 GTTAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACAAACTTGTCAAACTTTTACGCA-TTC
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTC
* * * **
33093730 TTTTTTAACTTCGATTCGTTATAGT
192 TTTTATAACTTCGATTCCTTAAAAC
* * * **
33093755 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCAACCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33093820 TGGTCTAAATAGTTTGTCATTTCGTAAACAAGTTTTGTTCTTTGAGTTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * * * *
33093885 AGAATTGTTTCTCACTAGATTCTTGGATGAACTTTCAAACTTGTCAAACTTTTACAAGTTCTTGT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
33093950 ATAACTTC-AGTTCCTTAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * * ** * * *
33093971 ATTCAAGATGATCCATTCCATCCAACAATTTTTTGAACATTCCATTCTCGGCAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* *
33094036 TGGTCTAAAGAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTCTATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * **
33094101 AGAATTGTTTCTCTCTGGGTTCTTGGACGAACTTTCAAACTTGTCAAACTTTTACGAGGCCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33094166 ATAACTTCGGTTCCTTAAAAC
196 ATAACTTCGATTCCTTAAAAC
* * *
33094187 ATTCAAGATGATCCATTCCTTCCATCAATTTTCCGAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33094252 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAATTTTTTGT-TTGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACG
* * * * * *
33094315 TGAGAATT-TTTATC-CATTGATTCTAGGACGAACTTACGAACTTGTCTAACATTTACGCA-TTC
129 TGAGAATTGTTTCTCTC-TTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTC
* * **
33094377 TTTTATAACTACGATTCCTTATAGT
192 TTTTATAACTTCGATTCCTTAAAAC
* * * **
33094402 ATTCAAGATGATCCATTCCTTCCAAG-AATGTTCCAAACATTCCAT-CGTCGGGAAATCACATCA
1 ATTCAAGACGATCCATTCCTTCC-AGCAATTTTCCGAACATTCCATGC-TCGGGAAATTGCATCA
* *
33094465 TTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACA
64 TTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACG
* * * *
33094530 TGAGAATTGTTTCTCTCTGGGTTCTTGGACTACCTTTCGAAGTTGTCAAACTTTTACGAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
*
33094595 TTATAACTTCGGTTCCTTAAAAC
194 TTATAACTTCGATTCCTTAAAAC
* * * *
33094618 ATTCAAGACGATCCATTCCTTCTAGCAATTTTTCGAACATTCCATGCTCGAGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
** * * * *
33094683 TCATCGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTATAAACTTATTTACATG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * ** *
33094748 AGAATAGTTTCTCTC-TGTTTCTTGGACAAACTACCAAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33094812 ATAACTT-TAGTTCCTTAAAAC
196 ATAACTTCGA-TTCCTTAAAAC
* * * * *
33094833 ATTCAAGACAATCCATTCCTTCCTGCAATTTTTCGAACATTCCATGCTCGAGAAATTGAATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33094898 TGGTGTAAGTAGTTT-TCCATTTTATAAACAAGTTTTGGT-TATGAATTAAAATCCTATTTACGT
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
* * * * * * * *
33094961 GAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAAGTTTTCAAAGTTTTACGCA-TTCTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCTT
* * **
33095024 TTATAAATTCGATTCCTTATAGT
194 TTATAACTTCGATTCCTTAAAAC
* * * * * * *
33095047 ATTCAAGATGATCCATTCTTTCCAACAATGTTT-CGAACATTCCATCCTCGAGAAATCGCATCGT
1 ATTCAAGACGATCCATTCCTTCCAGCAAT-TTTCCGAACATTCCATGCTCGGGAAATTGCATCAT
* * *
33095111 TTGATCTAAATAGTTTGTCAATTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGT
*
33095176 GAGAATTGTTTCCCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
33095241 TATAACTTC-AGTTCCTTAAAAC
195 TATAACTTCGA-TTCCTTAAAAC
* * * * **
33095263 ATTCAAGACGATCCATTCCTTCAAGCAATTTTCCAAAGATTCCATGCTCGAGAAATCACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
** * * * *
33095328 TCATCGAAAGAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTACAAACTTATTTACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33095393 AGAATAGTTTCTCTCTTGTTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33095458 ATAACTTCGGA-TCCTTAAAAT
196 ATAACTTC-GATTCCTTAAAAC
* *
33095479 ATTCAAGACGA-CCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTC-GGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33095542 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTAT-TCAC
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATAT-AC
* * * * * * * * * * *
33095604 GTGAGAATT-TTTATCCCTTGATTCTAGGATGATCTTACGAACTTGTCTAACATTTATGCGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
33095668 TTTATAACTTCGATTCC
193 TTTATAACTTCGATTCC
33095685 AAGGCACCAA
Statistics
Matches: 29573, Mismatches: 5845, Indels: 3276
0.76 0.15 0.08
Matches are distributed among these distances:
194 114 0.00
195 30 0.00
196 2 0.00
197 7 0.00
198 3 0.00
199 7 0.00
200 12 0.00
201 2 0.00
202 14 0.00
203 12 0.00
204 3 0.00
205 8 0.00
206 7 0.00
207 5 0.00
208 15 0.00
209 7 0.00
210 6 0.00
211 186 0.01
212 369 0.01
213 1724 0.06
214 4627 0.16
215 8853 0.30
216 9009 0.30
217 1355 0.05
218 474 0.02
219 454 0.02
220 234 0.01
221 137 0.00
222 116 0.00
223 109 0.00
224 311 0.01
225 59 0.00
226 52 0.00
227 31 0.00
228 37 0.00
229 56 0.00
230 48 0.00
231 63 0.00
232 63 0.00
233 116 0.00
234 73 0.00
235 88 0.00
236 94 0.00
237 99 0.00
238 85 0.00
239 64 0.00
240 38 0.00
241 29 0.00
242 40 0.00
243 38 0.00
244 36 0.00
245 27 0.00
246 20 0.00
247 16 0.00
248 12 0.00
249 3 0.00
250 3 0.00
251 1 0.00
252 1 0.00
253 3 0.00
254 6 0.00
255 8 0.00
256 7 0.00
257 9 0.00
258 9 0.00
259 5 0.00
260 7 0.00
261 9 0.00
262 3 0.00
263 3 0.00
ACGTcount: A:0.28, C:0.19, G:0.14, T:0.39
Consensus pattern (216 bp):
ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTG
AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
ATAACTTCGATTCCTTAAAAC
Found at i:33061203 original size:430 final size:431
Alignment explanation
Indices: 33058417--33095684 Score: 29056
Period size: 431 Copynumber: 86.0 Consensus size: 431
33058407 TCGTATCAGT
* * * * *
33058417 ATTCAAGACAATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGG-AATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
*
33058481 TGGTCT-AATAG-TTGTCATTTTGTAAACAAG-TTTGTTCTTTGAATTAAAAACTTATATACGTA
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* *
33058543 AGAATTATTTCTCTCTTGGTTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33058608 ATAACTTCA-TTTCTTAAAACATTCAAGATGATCCATTCCTTCCAGCAATTTTCCGAACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** * * *
33058672 TGCTCGACAAATGGCATCATTTGATCTAAATAGTTTGTCATTTTTCTAAACAAGTTTTGGTCTTT
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCA-TTTTGTAAACAAGTTTTGGT-TTT
* * * * * *
33058737 GAATAAAAAACTTATATA-GAT-AGAATTGTTTCTCTCTTGGTTCTTGGATGAACAT-CCAACTT
324 GAATTAAAAACTTATATACG-TGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTT
* * *
33058799 GTCAAACTTTTATGAGTCCTTTTATAACTTCGGTTCCTTAAAAC
388 GTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * *
33058843 ATTCAAGACGATCCATTCCATCCA-CAATTTTTTCGAACATCCCATGC-CCGGAAATTGTATCAA
1 ATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * * * * *
33058906 TTGGTCTAAGTTGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTAC
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATAC
* * * * * *
33058969 GTGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAAC-TTTACAAGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
33059032 TTTATAACTTC-GATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCTGAACA
193 TTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACA
* * *
33059095 TTCCATGCACGGGAAATTGCATCATTTTGTCTAAGAT-GTTT-TCCATTTTGT-AA-AAGGTTTG
256 TTCCATGCTCGGGAAATTGCATCATTTGGTCTAA-ATAGTTTGT-CATTTTGTAAACAAGTTTTG
* * * * * * *
33059156 GTTTGTGAA-TAAAATCCTATTTACTAC-TGAGAATT-TTTATCCCTTGACTCTAGGAAGAACAT
319 GTTT-TGAATTAAAA-ACT-TATA-TACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTT
* * * **
33059218 ACAAACTTGTCAAACTTTTACGCA-TTCTTTTATAACTTTGATTCCTTATAGT
380 ACGAACTTGTCAAACTTTTACG-AGTTCTTTTATAACTTCGATTCCTTAAAAC
* ** * *
33059270 ATTCAAGAAGATCCATTCCTTCCAAAAATGTTTCCAAACATTCCATCCTCAGGAAATTGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAAT-TTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * *
33059335 TTGGTCTAAAAAGTTTGTCATTTTGTAAACAAGTTTTGTTCCTTGAGTTAAAAACTTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
*
33059400 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAAATTTTACGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * *
33059465 TATAACTTTAGTTCCTTAAAACATTCAAGACGATCCATTCCATCCAGCAATTTTCCGAACATTCC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
** ** * **
33059530 ATGCTCGAAAAACCGCATCATTTCGTCTAAATTTTGTTGTCATTTTGTAAACAAGTTTTGGTCTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGT-TTGTCATTTTGTAAACAAGTTTTGGT-TT
* * * * * *
33059595 TG-ATT-AAAACTTATAT-TGTGAGAATTGTTTCT-CTTTCGGTTCTTGGATGAACAT-CCAACT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTT-GATTCTTGGACGAACTTACGAACT
* * * *
33059655 TGTCAAACTTTTTCGAGTCCTTTTATAACTTTGGTTCCTT-AAAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* *** *
33059699 ATTCAAGACGATCCATTCCTTCCATCAATTTTTTGAACATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * * *
33059764 TGGTCTAAGTAGTTTTTCCATTATGTAAACAAGTTTTGGTT-TGTGAATTTAAATCATATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * * * * *
33059828 TGAAAATT-TTTATCCCTTGATTCTAGGATGAACTTACAAACTTGTCAAACTTTTACGAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* ** * * * * * *
33059892 TTATAACTTC-GATTCCTTATAGTATTCAAGACGATCCATTTCTTCGAACAATGTTCCAAACATT
194 TTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
* * * * *
33059956 CCATCCTC-GGAAATCGTAACATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTCC
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* * *
33060019 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACT
322 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* *
33060084 TGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* *
33060129 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAAA-ATTCTATGCTCGGGAAATTGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * * * * *
33060193 TTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTGGTT-TGTGAATTAAAATCCTATTTACG
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACG
* * * * * * *
33060256 TGATAGTTGTTT-TCCCTTGATTCTAGGAC-AAGCTTACGAACTTGTCAAACTTTTACGCGTTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAA-CTTTCGAACTTGTCAAACTTTTACGAGTTCT
* ** * * * * *
33060319 TTTATAACTTC-GATTCCTTATAGTATTCAAGACGATCCATTTCTTCGTA-CAATGTTCCAAACA
193 TTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTC-CAGCAATTTTTCGAACA
* *
33060382 TTCCATCCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTT
256 TTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT
* * *
33060447 CTTTGAATTAAAAACCTATATACTTGAGAATTGTTTCTCTCTTG-TTCTTGGACGAACTT-CTGA
321 -TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTAC-GA
*
33060510 ACTTGTCAAACTTTTACGAG-T-TTTTATAACTT-TAGTTCCTTAAAAC
384 ACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* *** * ** *
33060556 ATTCAAGACGATCCATTCCATCCAGCAATTTTTTGAACATTCCATGCTTGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33060621 TGG-CCATATAGTTT-TCATTTTGTAAACAAGTTTTGGGTCTTTGAATTAAAAACATATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACGT
* * ** *
33060684 GAGAATTGTTTC-CATCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTATAAGTCCTT
130 GAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * *
33060748 TTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCTAGCAATTTTTCGAATATTC
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTC
* **
33060813 CATGCTCGGGAAATTGTATCATTTGGTCTAGGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT
* * * * * **
33060877 GTGAATTAAAATCCTATTTACATGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACGAACT
323 -TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* * * * * **
33060941 TGTCAAACCTTCACGCGTTCTTTTATAACTTCGATTCCGTATAGT
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * **
33060986 ATTCAAGACAATTCATTCCGTCCAACAATGTTCCAAACATT-CATCCTCAGGAAACAGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33061050 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * *
33061115 AGAATTGTTTCTATCTTGGTTCTTGGACGAACTTTCGAACTTGCCAAACTTTTACGAGTTCTATT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * *
33061180 ATAACTTCAGTTCCATAAAACATTCAAGACGATCCATTCCTTCTAGCAA-TTTCCAAACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** * *
33061244 TGCTCGACAAATGGCATCATTTGGTCTAAATAGCTTGTCATTTTGTAAAACAAGTTTTGGTCTTT
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGT-TTT
* * * * * * * *
33061309 GAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGGTTCCTGGATGAACATCCGAACTTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * *
33061374 TCAAACTTTTACAAGTTCTTTTATAA-TTTGGTTCCTTAAAAC
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * *
33061416 ATTC-AGACGATCCATTCCTTCTAGTAATTTTTCAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33061480 T-GTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * * * * * * * *
33061542 TAATAATT-TTTGTCCCTTGATTCTAGGACGAGCTTACGAATTTATCAAACTTTTACGCGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * ** * * ** * * * *
33061606 TTACAACTTC-GATTCCTTATAGTATTCAAGACGATCCATTTCTTCGAATAATGTTCCAAACAAT
194 TTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
* * *
33061670 CCATCCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* ** *
33061735 TTGAATTAAAAACTTATATACGTGAGAATTGTTTTCTCTCTTGGCTCTTGGACGAACTTTCGAAC
322 TTGAATTAAAAACTTATATACGTGAGAATTG-TTTCTCCCTTGATTCTTGGACGAACTTACGAAC
* * *
33061800 TTGTTAACCTTTTACGAGTTCTTTTAT-ACTTC-AGTTCCATAAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * * ** *
33061845 ACTCAAGACGATCCATTCCTTCCAGTAATTTTTCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33061910 TGGT-TCAAATAGTTTGTCATCTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATATAGGT
66 TGGTCT-AAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * * *
33061974 GAGAATTGTTTCTCTC-TGGCTCCTGTACGAACTTTCGAACTTGTCAAACATTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * *
33062038 TATAACTTCGGTTCCTTAGAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTTGAAAATTCC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
* * * * *
33062103 ATGATCGGGAAATTACATCATTTGGTCTAAGTAGTTAT-TAATTTTGAAAACAAGTTTTGGTTTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTT-TGTCATTTTGTAAACAAGTTTTGG-TTT
* * * * * * *
33062167 TGAATTAAAATCCTATTTACGTAAGAA-T-TTTATCCCTTGATTCTAGGACAAACTTACGAACTT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTT
* * * * * **
33062230 GTCAAACTTTAACGCA-TTCTTTTATCACTTTGATTCTTTATAGT
388 GTCAAACTTTTACG-AGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * *
33062274 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATCCCATCCTCGGGAAATTGCATTA-T
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
33062338 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * * *
33062403 AGAATTGTTTCTCTCTGGGTTCTTAGATGAACTTCCGAACTTGTCAAACTTTTAAGTGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * * *
33062468 ATAACTTCAGTTCCATAAAACAATCAAGACGATCCATTCCTTCTACCAATTTTTCGGACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** * * * * * *
33062533 TGCTCGACAAATTGCATTATTTGTTCTAAATA-TTTGTTATTTTGTAAACAAATTTTGGTCCTTC
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTTG
* * * * * * *
33062597 AATTAAAAACTTTTATAGGTGAGAATTGTTTCTCACTCGGTTCTTGGACGAACTTCCAAACTTGT
325 AATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGT
* * * * * *
33062662 CAAACATTTACAAGTTCTTTAATAACTACGGTTCCCTAAAAC
390 CAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* ** * *
33062704 ATTCAAGGCGATCCATTCCTTCCAGCAATTTTCTGAACATTCAATGCACGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33062769 TGGTCTAAGTAGTTT-TCCATTTTCTAAACAAGTTTTGGTT-TGTGAATCAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * *** * * * ** * *
33062832 TGATAATT-TTTATCACTAAATTCTAGGATGAGCTAACGAACTTGTCAAACTTTTACGCGTTCGT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* ** * * * * * *
33062896 TTATAACTTCTA-TTCCTTATAGTATTGAAGACGATCCATTTCTTCCAACAATGTTCCAAACATT
194 TTATAACTTC-AGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
* ** * * *
33062960 CCATCCTCGGGAAATCACATAATTTGGT-TAACTAGTTTGTCATTTTGTAAACAAGTTTTGTTCT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* * * * *
33063024 TTGAATTAAAAACTTATATACGTGAGAAAAT-TTTCTCTCTGGGTTCCTGGACG-ACTTTCACTT
322 TTGAATTAAAAACTTATATACGTGAG-AATTGTTTCTCCCTTGATTCTTGGACGAAC-TT-AC--
* * *
33063087 TCAACTTGTCAAACTTTTAGGAGTTCTTTTATAACTTCGGTTCCTTAAAAC
382 -GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * *
33063138 GTTCAAGACGTTCCATTCCTTCCAACAATTTTCTAAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33063203 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * *
33063266 TGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTACGAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * ** * ** * * *
33063330 TTATGACTTC-GATT-CTTATAGTATTCAAGATGATCCATTCCTTCCAATAATGTTCCAAACATT
194 TTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
* ** * * * *
33063393 CCAT-CATCAGGAAATCACCTCATTTGGTCTAAATAGTTTGCCATTTTGTAAACAAGTGTTGTTC
258 CCATGC-TCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-
* * * * * **
33063457 TTTGAATTAAAAACTTATATACGTGAGAATTGTTTATCTCTAGGTTCTTGGACAAACTTTTGAAC
321 TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAAC
* * * *
33063522 TTGTCAAACATTGATC-AGTTCTTTTACAACTTC-ATTTCCTTAAAAT
386 TTGTCAAACTTTTA-CGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * *** * *
33063568 ATTCAAGATGATCCATTCCTTCCAGTAATTTTTCAAACATTCCATGCTCAACAAATCGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33063633 TGGTCTAAATAGTTTGTCGTTTTGTAAAAAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33063698 AGAATTGTTTCTCTCTTAGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* *
33063763 ATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAATATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
* * * * *
33063828 TGCTCGGGAAATTGTATCATTTGGTCTAAGTAGTTAGTCATTTTGTAAACAACTTTTGTTCTTTG
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTTG
* * * *
33063893 AATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTGGGTTCTTGGACGAACTTTCGAACTTGT
325 AATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGT
* ** * * *
33063958 CAACCTTTTATAAGTTCTTTTACAACTTC-ATTTCCTTAACAT
390 CAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * * ** *
33064000 ATTCAAGATGATCCATTCATTCAAGCAATTTTTCAAACATTCCATGCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* *
33064065 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33064130 AGAATTGTTTCCCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33064195 ATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTATCGAATATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
* * * *
33064260 TGCTTGGGAAATTGTATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATG
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTTG
* * * * * * *
33064325 CATTAAAAACTTATATAGGTGAGAATTATTTCT-CGTTCGGTTCTTGGACAAACTTCCGAACTTG
325 AATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTT-GATTCTTGGACGAACTTACGAACTTG
* * *
33064389 TCAAACCTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAAC
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * *
33064432 ATTCAAGACGATCCACTCCTTCCAGTAATTTTCTAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33064497 TGGTCTAAGTAGTTT-TCCATTTTGTAACCAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * * * * * *
33064560 TTAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTATGCGTTCCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* ** * * * *
33064624 TTATAACTTC-GATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATT
194 TTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
* * * * * *
33064688 CCATCCTCGGGAAATCGCATCATTTGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* * * * * *
33064753 TTGAATCAAAAACTTATATACGTGCGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACT
322 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
33064818 TGTCAAACTTTTACGAGTTCTTTTATAACTTC-AGTTCCTTAAAAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
** * ** *
33064863 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTCTGAACATTCCGTGCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33064927 TGGCCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * ** *
33064991 AGAATTGTTTCCCTCTTAGTTCTTGGATGAACTTTCGAACTTGTTAAACTTTTATAAGTCCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* *
33065056 ATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCTGAATATTCC
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTCC
* *
33065120 ATGCTCGGGAAATTGTATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTG
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT-
* * * * ** *
33065184 TGAATT-AAAATTCTATTTACATGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACAAACT
323 TGAATTAAAAACT-TATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* * * * * **
33065247 TGTCAAACTTTTATGCGTTCTTTTGTAACTTTGATTCCTTATAGT
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* ** * * * * **
33065292 ATTCAAGATGATCCATTCCAACCAACAATGTTCCAAACATT-CATCCTTGGG-AATCACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33065355 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * *
33065420 AGAATTGTTTCTTTCTTGGTCCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAGTTTTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33065485 ATAACTTCAGTTCCTTCAAACATTCAAGACGA-CCATTCCTTCCAGCAATTTTTCGAACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** *
33065549 TGCTCGACAAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTGTTT
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGT-TTT
* * * * * *
33065614 GAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTAGGTTCTTGGACGAAATTTCGAACTTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * * *
33065679 TCAAAATTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAAG
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* *
33065722 ATTCAAGATGATCCATCCATTCCTTCCAGCAATTTTCTGAAA-ATTCCATGCTCGGGAAATTGCA
1 ATTC-A-A-GA-CGATCCATTCCTTCCAGCAATTTTC-CAAACATTCCATGCTCGGGAAATTGCA
* *
33065786 TCATTTGGTCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACATATAT
61 TCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATAT
** * * * * *
33065850 TGGTGCGAATTGTTTCCCTCTTGGTTCTTGGATGAACTTTCGAAGTTCTCAAACTTTTA-GAAGT
126 ACGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGT
* * * * *
33065914 CCTTTTATAACTTCGGTTCCTTAAAACATTGAAGACGATCCATTCCTTCCAGCAATTTTCCGAAT
190 TCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAAC
* * **
33065979 ATTCCATGCTCGGGAAATTGTATCATTTTGTCTAGGTAGTTT-TCCATTTTGTAAACAAGTTTTG
255 ATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTG
* * * * * * **
33066043 GTTTGGGAATTAAAATCCTATTTACATGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACG
319 GTTT-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACG
* * * * * **
33066107 AACTTATCAAACTTTTACGCGTTCTTTTACAACTTTGATTCCTTATAGT
383 AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * *
33066156 ATTCAAGACGATCCATTTCTTCGAACAATGTTCCAAACAATCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
33066221 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
*
33066286 AGAATTGTTTCTCTCTTGGCTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33066351 ATAACTTCAGTTCCATATAACACTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** *
33066416 TGCTCGACAAATGGCATCATTTGGT-TCAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTT
261 TGCTCGGGAAATTGCATCATTTGGTCT-AAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * ** *
33066480 GAATTAAAAACATATATAGGTGAGAATTGTTTCTCTCTTGGCTCTTGGACGAACTTCCGAACTTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * * *
33066545 TCAAACATTTACAAGTTCTTTTATAACTTCGGTTCCTTAGAAC
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* ** * *
33066588 ATTCAAGACGATCTATTCCTTCCAGCAATTTTTTGAAA-ATTCCATGATCGGGAAATTACATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * *
33066652 TTGGTCTAAGTAG-TTATCAATTTTGTAAACAAGTTTTGGTT-TTTGAATTAAAATAC-TATTTA
65 TTGGTCTAAATAGTTTGTC-ATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAA-ACTTATATA
* * * * * * * * *
33066714 CGTAAGAATT-TTTATCCCTTGATTCTAGGACAAACTTACGGACTTGTCAAACTTTAACGCA-TT
127 CGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTT
* * * ** * * * *
33066777 CTTTTATAACTT-TGATTCTTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAAC
191 CTTTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAAC
* * * *
33066841 ATCCCATCCTCGGGAAATTGCATTATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGT
255 ATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGG
* * * * * *
33066906 TCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTGGGTTCTTAGATGAACTTCCGA
320 T-TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGA
* * *
33066971 ACATGTCAAACTTTTAAGTGTTCTTTTATAACTTC-AGTTCCTTAAAAC
384 ACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * ** ** *
33067019 AATCAAGACGATCCATTCCTTCTACCAATTTTCCGGACATTCCATGCTCGACAAATTGCATTATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * * *
33067084 TGTTCTAAATAGTTTGTTATTTTGTAAACAAATTTTGGTCCTTCAATTAAAAACTTTTATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * *
33067149 AGAATTGTTTCTCTCTCGGTTCTTGGACGAACTTCCGAACTTCCGAACTTGTCAAACATTTACAA
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAAC-T------TT-CGAACTTGTCAAACTTTTACGA
* * * * *
33067214 GTTCTTTAATAACTACGGTTCCCTAAAACATTCAAGGCGATCCATTCCTTCCAGCAA-TTTTCTG
188 GTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-G
* * *
33067278 AACATTCAATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTCTAAACAAGTT
252 AACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTT
* * * * * * ** * * *
33067342 TTGGTTTGTGAATTAAAATCCTATTTACGTGATAATT-TTTATCGCTAAATTCTAGGATGAACTA
316 TTGGTTT-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTT
* * * * * * **
33067406 ACGAACTTGTCAAACTTTTGCGCGTTCGTTTATAACTTCTATTGCTTATAGT
380 ACGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * ** *
33067458 ATTGAAGATGATCCATTTCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCACATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
*
33067523 TGGT-TAACTAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33067587 AGAAAAT-TTTCTCTCTGGGTTCCTGGACGAACTTTCAAACTTGTCAAACTTTTAGGAGTTCTTT
131 AG-AATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * *
33067651 TATAACTTCGGTTCCTTAAAA-AGTTCAAGACGTTCCATTCCTTCCAACAA-TTTTCTAAACATT
195 TATAACTTCAGTTCCTTAAAACA-TTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATT
* *
33067714 CCATGCTCGAGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTT
* * * * * * *
33067778 TGTAAATTAAAATCCTATTTATGTGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAAC
322 T-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAAC
* * **
33067842 TTGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGT
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* ** * ** *
33067888 ATTCAAGATGATCCATTCCTTCCAATAATGTTCCAAACATTCCAT-CGTCGGGAAATCACCTCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGC-TCGGGAAATTGCATCAT
* *
33067952 TTGGTCTAACTAGTTTGCCATTTTGTAAACAAGTGTTT-TTCTTTGAATTAAAAACTTATATACG
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGT-TTTGTTCTTTGAATTAAAAACTTATATACG
* * * * *
33068016 TGAGAATTATTTATCTCTAGGTTCTTGGACAAACTTTTGAACTTGTCAAACTTTTATC-AGTTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTA-CGAGTTCT
* * * * * *
33068080 TTTACAACTTCATTTCCTTAAAATATTCAAGATGATCCATTCCTTCCAGTAATTTTTCAAACATT
193 TTTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
*** * * ** *
33068145 CCATGCTCAACAAATCGTATCATTTGGTCTAAATAGTTTGTTGTTTTGTAAAAAAGTTTTGGTCT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* * * * *
33068210 TTGAATTAAAAACTTATGTAGGTGAGAATTGTTTCTCTCTT-AGTTCTTGGATGAACTTCCGAAC
322 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGA-TTCTTGGACGAACTTACGAAC
* * *
33068274 ATGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
*** * *
33068320 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTTGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33068385 TGGTCTAAGTAGTTAGTCATTTTGTAAACAATTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * **
33068450 AGAATTGTTTCTCTCTGGGTTCTTGGACGAACTTTCGAACTTGTCAACCTTTTATAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * * * * * *
33068515 ACAACTTCATTTCCTTAACATATTCAAGATGATCCATTCATTCAAGCAATTTTTCAAACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** *
33068580 TGCTCGACAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTCTTTG
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTTG
* * * * *
33068644 AATTAAAAACTTATATAGGTGAGAATTGTTTC-CCTCTTGGTTCTTGGATGAACTTCCGAACATG
325 AATTAAAAACTTATATACGTGAGAATTGTTTCTCC-CTTGATTCTTGGACGAACTTACGAACTTG
* *
33068708 TCAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAAC
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * *
33068751 ATTCAAGACGATCCATTCCTTCCAGCAATTTAT-CGAATATTCCATGCTCGGGAAATTGTATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTT-TCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * * * *
33068815 TTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTATGCATTAAAAACTTATATAGGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * * * *
33068880 GAGAATTATTTCTCGT-TCGGTTCTTGGACAAACTTCCGAACTTGTC-AACCTTTACAAGTTCTT
130 GAGAATTGTTTCTC-TCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * * * *
33068943 TTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCACTCCTTCCAGTAA-TTTTCTAAAAATT
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATT
* * *
33069007 CCATGCTAGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAACCAAGTTTTGGTT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTT
* * * * * *
33069071 TGTGAATTAAAATCCTATTTACGTTAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAAC
322 T-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAAC
* * * * **
33069135 TTGTCAAACTTTTATGCGTTCCTTTATAACTTCGATTCCTTATAGT
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * *
33069181 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33069246 TGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * *
33069311 CGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
*
33069376 ATAACTTCAGTTCCTTAAAACATTCAAGACGAT-CATTCCTTCCAGTAA-TTTTCTGAACATTCC
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTCC
* ** * *
33069439 GTGCTCGACAAATCGCATCATTTGGCCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * *
33069503 GAATTAAAAACATATATAGGTGAGAATTGTTTC-CCTCTT-AGTTCTTGGATGAACTTTCGAACT
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCC-CTTGA-TTCTTGGACGAACTTACGAACT
* ** * *
33069566 TGTTAAACTTTTATAAGTCCTTTTATAACTTCGGTTCCTTAAAAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
** * *
33069611 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33069676 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATT-AAAATTCTATTTAC
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACT-TATATAC
* * * * ** * * * * *
33069738 ATGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACAAACTTGTTAAACTTTTATGCGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* * * ** * ** * * * *
33069802 TTTGTAACTT-TGATTCCTTATAGTATTCAAGATGATCCATTCCAACCAACAATGTTCCAAACAT
193 TTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
* * ** * * * *
33069866 T-CATCCT-TGGAAATCACATCATTTGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTC
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-
* ** * * *
33069929 TTTGAATCAAAAACTTATATACGTGAGAATTGTTTCTTTCTTGGTCCTTGGACGAACTTCCGAAC
321 TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAAC
* *
33069994 TTGTCAATCTTTTACGAGTTCTTTTATAACTTC-AGTTCCTTCAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * ** *
33070040 ATTCAAGACGA-CCATTCCTTTCAGCAATTTTTCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33070104 TGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTGTTTAAATTAAAAACTTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * * *
33070169 GAGAATTGTTTCTCGCTAGGTTCTTGGACGAAATTCCGAACTTGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * *
33070234 TATAACTTCGGTTCCTTAAAAGATTCAAGATGATCCATTCCTTCCAGCAA-TTTTCTGAAAATTC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTC
33070298 CATGCTC-GGAAATTGCATCATTTGGTCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TT
* ** * * * *
33070361 TGAATTAAAAACATATATTGGTGAGAATTGTTTC-CCTCTTGGTTCTTGGATGAACTTTCGAAGT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCC-CTTGATTCTTGGACGAACTTACGAACT
* * *
33070425 TCTCAAACTTTTA-GAAGTCCTTTTATAACTTCGGTTCCTTAAAAC
387 TGTCAAACTTTTACG-AGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * *
33070470 ATTGAAGACGATCCATTCCTTCCGGTAATTTTCCGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
** * ** * * * *
33070535 TGGTCTAGGTAGTTT-TCCATTTTG-AAACATGTTTTGGTT-TGGGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * ** * * * *
33070597 TGAG-ATTTTTTATGC-CTTGATTCTAAGACGAACTTACAAACTTGTCAAACTTTTATGCGTTCT
129 TGAGAATTGTTTCT-CTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* * ** * ** * * * *
33070660 TTTGTAACTTC-GATTCCTTATAGTATTCAAGATGATCCATTCCAACCAACAATGTTCCAAACAT
193 TTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
* * * * * * *
33070724 T-CATCCTTGGGAAATCGCATCATTTGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTC
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-
* ** * * *
33070788 TTTGAATCAAAAACTTATATACGTGAGAATTGTTTCTTTCTTGGTCCTTGGACGAACTTCCGAAC
321 TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAAC
*
33070853 TTGTCAAACTTTTACGAGTTCTTTTATAACTTC-AGTTCCTTCAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * ** * *
33070899 ATTCAAGACGA-CCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGACAAATGGCATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33070963 TGGTCTTAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTGTTTGAATTAAAAACTTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * * * *
33071028 GAGAATTGTTTCTCGCTAGGTTCTT-GACGAAATTCCGAACTTGTCAAAATTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
** * * *
33071092 TATAACTTTGGTTCCTTAAAAGATTCAAGATGATCCATTCCTTCCAGCAA-TTTTCTGAAAATTC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTC
33071156 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TT
* ** * * * *
33071220 TGAATT-AAAACATATATTGGTGAGAATTGTTTC-CCTCTTGGTTCTTGGATGAACTTTCGAAGT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCC-CTTGATTCTTGGACGAACTTACGAACT
* *
33071283 TGTCAAACTTTTA-GAAGTCCTTTTATAACTTCGGTTCCTTAAAAC
387 TGTCAAACTTTTACG-AGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * *
33071328 ATTGAAGATGATCCATTCCTTCCAGCAATTTTCCGAATATTCCATGCTCGGGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* ** ** * * * *
33071393 TTGTCTAGGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGGGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * ** * *
33071456 TGAGAATT-TTTATCCCTTGATTCTAAGACGAACTTACGAACTTATCAAACTTTTACGCA-TTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCT
* ** * ** * * *
33071519 TTTATAACTTC-GATTCCTTATAGTATTAAAGACGATCCATTCCTTCCAAAAATGTTCCAAACAT
193 TTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
* * * * * * * *
33071583 T-CATCCTTGGGAAATCGCATCATTTGATCCAAATAGTTTGTCATTTTGGAAAGAAGTTTTGTTC
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-
* * ** * *
33071647 TTTGAATCAAAAACTTATATACGTGAGAATAGTTTCTTTCTTGGTTCTTGGACGAACTTCCGAAC
321 TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAAC
*
33071712 TTGTCAAACTTTTCCGAGTTCTTTTATAACTTC-AGTTCCTTAAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* ** * * * * ** *
33071758 ATTCAAGATGAT-CATTCCTTCCAGTGATTTTTCGAATATTCCATGCTAGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* *
33071822 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33071887 AGAATTGTTTCCCCCTCGGTTCTTGGACGAAC-TTCTGAACATGTCAAACTTTTACAAGTTCTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTT
* *
33071951 TATAACTTC-GATTCCTTAAAACATTCAAGACTATCCATTCCTTCCAGCAATTTTTCGAATATTC
195 TATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTC
* * * *
33072015 TATTCTCGGGAAATTGTATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TT
* * * * * * *
33072080 TGCATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGGTTCTTGGAAGAACTTCCGAACTT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTT
* * * * *
33072145 GTCAAACTTTCACAAGTTCTTTTATAACTTTGATTCCTAAAAAG
388 GTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * **
33072189 ATTCAAGATGATCCATTCCTT-TAGCAATTTTTTGAAA-ATTCCATGCTCGGGAAATTGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * * * * * *
33072252 TTGGTGTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTCAATTAAAATCCTATTTAC
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATAC
** * * * * *
33072315 GTGAGAATT-TTTAACCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTTA-TATGCAT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGA-G--T
* * *** * * * *
33072378 T-TTTTGATAACTTCAATTCCTTATAGTGTTCAAGACGATCCATTCCTTCCAACAATGTTCCAAA
190 TCTTTT-ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAA
* * * * * *
33072442 CATT-CATCCTCGGGAAATCGCATCATTTGATCCAAATGGTTTTGTCATTTTGTAAAGAAGTTTT
254 CATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAG-TTTGTCATTTTGTAAACAAGTTTT
** * * * *
33072506 ATTCTTTGAATCAAAAACTTATATACGTGCGAATTGTTTCTCTCTTGGTTCTTGGACGAACTT-C
318 GGT-TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTAC
33072570 TGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-AGTTCCTTAAAAC
382 -GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * ** * *
33072621 ATTCAAGACAAT-CATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGACAAATCGCATCTTT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33072685 TGGTCTAAATAGTTT-TCATTTTGTAAACAAGTTTTGGTCTCTGAATTAAAAACATATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * ** *
33072749 AGAATTGTTTCCCACTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTATAAGTCCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * * * *
33072814 ATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGTAACTTTCCAAAAATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
* * * *
33072879 TGCTCGGGAAATTGCAT-AGTTTGGTCTAAGTAGTTTTTCCATTTTGTAAAGAAGTTTCGGTTTG
261 TGCTCGGGAAATTGCATCA-TTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT-
* ** * * * * * *
33072943 AGAATTAAAGTCCTATTTACGTGATAA-T-TTTATCCCTTGATTCTAGGA-TAAGCTTACGAACT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAA-CTTACGAACT
* * *
33073005 TGTCAAACTTTTACGCGTTCTTTTATAACTTCGACTCC-TAATAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33073049 TATTAAAGACGATCCATTTCTTCGAACAATGTTCCTAACATTCCATCCTCGGGAAATCGCATCAT
1 -ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
*
33073114 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATATGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * *
33073179 GAGAATTGTTTCTCTCTTGGCTCTTGGATGAACTTTCGAACTTGTCAAACTTTTACGAGCTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * **
33073244 TATAACTTCAGTTCCATAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTAT
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
** * *
33073309 ATGCTCGACAAATGGCATCATTTGGTCTATATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * *
33073374 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCGCTAGGTTCTTGGACGAAATTCCGAACT
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTC-C-CTTGATTCTTGGACGAACTTACGAACT
* * **
33073439 TGTCAAACTTTTACAAGTTTTTTTATAACTTC-AGTTCCAGAAAAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * * ** *
33073484 ATTCAAGATGATCCATTCCTTCTAGCAATTTTTCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33073549 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTCGAATTAAGAACTTATATAAGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33073614 AGAATTGTTTCTCACTCGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* ** *
33073679 ATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCTTCAA-TTTTCTGAAAATTCC
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTCC
* * * * *
33073743 ATGATCGGGAAATTACATCATTTGGTCTAAGTAGTTAT-CCGTTTTGTAAACAAGTTTTGGTTTG
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTT-TGTCATTTTGTAAACAAGTTTTGGTTT-
* * * * *
33073807 TGAATTAAAATCCTAT-T-CGAGATAATT-TTTATCCCTTGATT-TTAGGACGAACTTACGAACT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTT-GGACGAACTTACGAACT
* * **
33073868 TGTCAAACTTTTAC-ACATTCTTTTATAACTTCGATTCCTTATAGT
387 TGTCAAACTTTTACGA-GTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * ** *
33073913 ATTCAAGACGATCCATTCTTTCCAACAATGTTCCAAACATTCCATCCTCTTGAAATTGCATCTTT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
33073978 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * *
33074043 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCATACTTTTAAGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33074108 ATAACTTCAGTTCCTTAAAACAATCAAGACGATCCATTTCTTCTAGCAATTTTTCGAACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** ** * * * *
33074173 TGCTCGACAAATCACATCATTTGTTCTAAATAGTTTGTTATTTTGTAAAAAAGTTTTGGTCCTTG
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTTG
* * * *
33074238 AATTAAAAATTTATATAAGTGAGAATTGTTTCTCACTCT-ATTCTTGGACGAGCTT-CTGAACTT
325 AATTAAAAACTTATATACGTGAGAATTGTTTCTCCCT-TGATTCTTGGACGAACTTAC-GAACTT
* * *
33074301 GTCAAACATTTAC-ATGTTCTTTTATAACTACGGTTCCTTAAAAC
388 GTCAAACTTTTACGA-GTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33074345 ATTCAAGGCAATCCGTTCCTTCCGGCAATTTTTCGAACATTCAATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* ** * * * * * * *
33074410 TGGTGTATGTAGTTTTTCATTTTGTAACCAAGTTTTGGTT-TGTAAATTAAAATCCTATTTACGT
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACGT
* * * * ** ** * *
33074474 G-GTAATTTTTAAATAAGTAGTTTTCCATTCCTTCCA-GCAATGTTTCGACATTCCATGCTCGAC
130 GAG-AATTGTT---T--CT-CTCTT-GGTT-CTTGGACG-AA-CTTTCGA-A---CTTG-TC-A-
* ** * * *** * * * * *** * *
33074537 AAATTGCATC-ATTTGGTCCAAAAAGTT-TG-TCCTTTTGTAAAAAAGTTTTGGTCTTTGAATTA
177 AACTTTTA-CGAGTT-CTTTTATAACTTCAGTTCC---T-TAAAACA-TTCAAGAC---G-A-TC
* ** * ** * *** ** * * * * *
33074599 AAAACTTATATAGGTGAGAATTATTTCTCTC-TT-GGTTCTTGGATGAACTTCGGAACA--T-GT
230 CATTCCT-TCCA---G-CAATT-TTTCGAACATTCCATGCTCGG--GAAATT-GCATCATTTGGT
* * ** * *** *** * *
33074659 C-AAACT--TTT-ACAAGTTCTTTTATAACTTCG-ATTCCCTAAAACATTCAAGAC-TATCCATT
286 CTAAA-TAGTTTGTC-A-TT-TTGTA-AAC-AAGTTTTGGTTTTGA-ATTAAAAACTTAT--A-T
* * * **** * * * * * * * *
33074718 CCTTCCAGCAA-T-TTTCAGAATATTCCATGCTCGGA-AAATTGTATC-ATCTGGTCTAAGTAGT
341 ACGT-GAG-AATTGTTTC--TCCCTT-GATTCTTGGACGAACT-TA-CGAACTTGTC-AA--ACT
* * * *
33074779 TTGT-C-A-TT-TTGTA-AACAAGTTTTGGTCTTTGCACTAAAAAC
396 TT-TACGAGTTCTTTTATAAC-----TTCG--ATT-C-CTTAAAAC
* ** ** **** ** * *
33074820 TTATAT-AGGA-GA-GAATTGTTTTCTC-GC-----TCGGTTC-TTGGATGAACTTC-TGAACTT
1 --AT-TCAAGACGATCCATT-CCTTC-CAGCAATTTTCCAAACATTCCATG--C-TCGGGAAATT
* * * * ** ** * *
33074874 GTCA-AACTT--T-TACA-AG--T-TC-TTTTAT-AAC---TTCGGTTTCCTTAAAACATTCAAG
58 G-CATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTG-TT-CTT-TGA-ATTAAAA
* * * * **** ** * ** * **
33074926 AC-GATCCATTCCTTCTAGCAATT-TTTCGAAAATTGCATCATTTGGTCTAAGTAGTTTTCCATT
118 ACTTAT--A-TACGT-GAG-AATTGTTTC-TCTCTTGGTTC--TTGG---ACG-AACTTTCGAAC
* * * * * ** * ***
33074989 TTGT-AAACAAGTTTT--G-GTT-TGTGAATTA-AAATCCTATTTACTTGATAATTTTTATCCCT
171 TTGTCAAAC---TTTTACGAGTTCT-T---TTATAACTTC-AGTTCCTT-AAAACATTCAAGAC-
* ** * * * * ** * ***
33075048 TGATTCTAGGACGAGCTTAC-G-AACTTGTCAAAC-TTTTACGCGTTCTTTTATAACTT-CGATT
226 -GA-TCCA-TTC---CTTCCAGCAATTTTTCGAACATTCCATGC--TC-GGGA-AA-TTGC-A-T
* * * * * * * * ****** ** *
33075109 CCTTATAGTATTCAAGACG-AT-CCATTTCT-TCGAACAATGTTCCAAACATTCCATCCTCGAGA
278 CATT-TGGT-CTAAATA-GTTTGTCATTT-TGT-AAACAA-GTT-TTGGTTTTGAAT--T--AAA
* ** * * * ** **
33075171 AA-TTGCAACATTTGGTCTA-AATAGTTTGTCATTTTGTAAACAAGTT-TTGTTCTTTGAA-TTA
332 AACTT---ATA-TACGT-GAGAATTGTTTCTC-CCTTG------A-TTCTTGGAC---GAACTTA
** * * * ** * * *
33075232 AAAACTTATATACGTGAGAATTGTTTCTCTCTTG-GTTCTTGGACGAACTTCCGA--ACTGTCAA
381 CGAAC---T-T--GTCA-AA--CTTT-T-AC--GAGTTCTTTTA-TAACTT-CGATTCCT-TAAA
33075294 AC
430 AC
* * * * ** * ** * **
33075296 TTTTACAAGTTCTTTTAT-CACTTCGGTTCTTGAAAACATT-CAAGACGA-TCCATTCCTTCCAG
1 -ATT-CAAG-AC---GATCCA-TTC-CTTCCAG-CAATTTTCCAA-AC-ATTCCA-TGC-TCGGG
* *
33075358 TAATTTTCTGAATATTCCATGCTCGGGAAATTGTATCATTAGGTCTAAGTAGTTTGTCATTTTGT
53 AAATT----G-------CA---TC----------AT--TT-GGTCTAAATAGTTTGTCATTTTGT
* * ** * * * *
33075423 AAACAAGTTTAGGTCTACGCATTAAAAACTTATATAAGTGAGAATTGTTTCTCGCTCGGTTCTTG
91 AAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTG
* * *
33075488 GACGAAC-TTCTGAACTTGTCAAACTTTTACAAGTTCTTTTTATAACCTCAGTTCCATAAAACAT
156 GACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTC-TTTTATAACTTCAGTTCCTTAAAACAT
* * ** * *
33075552 TCAAGACGATCCATTCCTTTCAGTAATTTTTCGAACATTCCATGCTCGACAAATGGCTTCATTTG
219 TCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCGGGAAATTGCATCATTTG
* *
33075617 GTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAG
284 GTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTTGAATTAAAAACTTATATACGTGAG
* * * *
33075682 AATTGTTTCTCGCTCGATTTCTTGGACGAACTT-CTGAACTTGTTAAACTTTTACAAGTTCTTTT
348 AATTGTTTCTCCCTTGA-TTCTTGGACGAACTTAC-GAACTTGTCAAACTTTTACGAGTTCTTTT
*
33075746 ATAACTTCGGTTCCTTAAAAC
411 ATAACTTCGATTCCTTAAAAC
* * * * * *
33075767 ATTCAAGACGATCCATTCCTTCCAGTAATTTTTCGAATATTCCATGCTCGAGAAATTGTATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33075832 TGGTTTAAGTAGTTTGTCATTTTGTAAACAAGTTTTAG-TCTATGCATTAAAAACTTATATAAGT
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACGT
* * * * * * *
33075896 GAGAATTATTTCTCGCTCGATTCTTGGATGAACTTCCGAACTTGTCAAACTTTT-CAAAGTTCTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTAC-GAGTTCTT
* ** * *
33075960 TCATAACTTTGGTTCCTTAAAACATTCAAGACGATCCATTCCTCCTTCAGCAATTTTTCGAATAT
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCT--TCCAGCAATTTTTCGAACAT
* *
33076025 TCCATGCTCGAGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTTGTAAACAAGTTTTGG
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CA-TTTTGTAAACAAGTTTTGG
* * * * * * *
33076089 TTTGTGAATTAAAATCCTATTTACGTGATAGTT-TTTATCCCTTGATTCTAGGACGAACTTACGA
320 TTT-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGA
* * * * **
33076153 ACTTGTCAAACTTTTACGGGTTCTTTTGTAAATTCGATTCCTTATAGT
384 ACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * *
33076201 ATTCAAGACGATCCA-TCCTTCCAAC-ATGTTCCAAACATT-CATCCTC-GGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33076262 TGATCCAAATAGTTTGTCATTCTGTAAAGAAGTTTTGTTCTTTGAA-TCAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* *
33076326 AAAATTGTTTCTTTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33076391 ATAACTTCAGTTCCTTAAAACATTCAAGGCGAT-CATTCCTTCCAGCAAATTTTCGAACACTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** * *
33076455 TGCTCGACAAATGGCATCATTTGGTCTAACTAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTT
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGT-TTT
* * * * *
33076520 CAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTGGCTGATTATTGAACGAACTT-CTGAA
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCT---TGATTCTTGGACGAACTTAC-GAA
* * * *
33076584 CTTGTCAAACTTTGT-CAAGTTCTTTTATAAGTTAGGTTCCCTTAAAAC
385 CTTGTCAAACTTT-TACGAGTTCTTTTATAACTTCGATT-CCTTAAAAC
* * *
33076632 ATTCAAGGCAATCCATTCCTTCCAGCAATTTTCCAAAAATTCCATGCTC-GGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33076696 TGGCCTAAGTAGTTT-TCCATTTTGTAAAACAAGTTTTGGTT-TGTGAATTAAAATCTTATTTAC
66 TGGTCTAAATAGTTTGT-CATTTTGT-AAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATAC
* * * * * * *
33076759 GTGATAATT-TTATC-C-CTTGATTCTAGGACGAGCTTACGAACTTGTCAAAATTTTACGCGTTC
128 GTGAGAATTGTT-TCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTC
* ** * * * * * * *
33076821 TTTTATAACTTC-GATTCCTTATAGTATTCAAGATGATCCATTTCTTCGAACAATGTTCCAAACA
192 TTTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACA
* * *
33076885 TTCCATCCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGCAAACAAG-TTTGGT
256 TTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT
* * * *
33076949 CTTTGAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAA
321 -TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAA
* * *
33077014 ATTGTCAAACTTTTACAAGTTCTTTTATAACTTC-AGTTCCATAAAAC
385 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* *
33077061 ATTCAAGACGATCCATTCCTTCAAGCAATTTTCCAAACATTCCATGCT--GGACAAATGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGA-AATTGCATCAT
* *
33077124 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAAACTTATATAGG
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATT-AAAAACTTATATACG
* * * *
33077189 TGAGAATTG--TCTCGCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * * * *
33077252 TTATAACTTAAGTTCCCTAAAACATTCAAGACGATCCATTCCTTCCAGTAATTTTTCAAAAATTC
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTC
*
33077317 CATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT
* * * * * * **
33077381 GTGAATTAAAATCCTATTTACGAGAGAATT-TTTATCCCTTGATTCTAGGTTGAACTTACGAACT
323 -TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
** **
33077445 TGTCAAACTTTTACGCA-TTCTTTTATAACTTCGA-TCCTTCCAGT
387 TGTCAAACTTTTACG-AGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * **
33077489 ATTGAAGACGATCCATTCCTTCCAACAA-TTTCCAAACATTCCATCCTCTTGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* *
33077553 TGGTCTAAATAGTTTGTCATTTTGCAAAC-AGTTTTGTTCTTTGAATTAAAAACTTATATACCTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * * *
33077617 GGAATTCTTTCTCTCTGGGTTCTTGGACTAAC-TTCTGAACTTGTAAAACTTTTAAGAGTTC-TT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTT
* * * *
33077680 TATAACTTCAGTTCCTTAAAACAATCAAGACGATCCATTTCTTTCTAGCAATTTTCCGAACATTC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCA-TTCCTTCCAGCAATTTTTCGAACATTC
* ** * * * *
33077745 CATGCTTGACAAATCGCATCATTTGTTCTAAATAGTTTGTTATTTTGTAAACAAGTTTTGGTCCT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TT
* * * *
33077810 TGAATTAAAAACTTATATAGGTGAGAATTGTTTCTCACTCTG-TTCTTGGACGAGCTT-CAAAAC
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCT-TGATTCTTGGACGAACTTAC-GAAC
* * * *
33077873 TTGTCAAACATTTAC-AGGTTATTTTATAACTACGGTTCCTCCTTAAAAC
386 TTGTCAAACTTTTACGA-GTTCTTTTATAACTTC-GAT--TCCTTAAAAC
* * * * *
33077922 ATTCAAGGCAATCCATTCCTTCCAGCAATTTTTCGAACATTCAATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * ** * *
33077987 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAGTCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * ** *** * *
33078050 TGATAAATT-TTTATCTAAGTAGTTTTTCCATTCCTTCCAGCAATGTTTCGACATTCCATGCTCG
129 TGA-GAATTGTTTCTCT--CT--TGGTT-C-TT--GGAC-G-AA-CTTTCGA-A---CTTG-TC-
* ** * ** ** * * * * *** * ** **
33078114 AAAAATTGCATC-ATTTGGTCCAAATAGTT-TG-TCCTTTTGTAAACAAGTTTGTGTCTTTAAAT
176 -AAACTTTTA-CGAGTTCTTTTATA-ACTTCAGTTCC--TT-AAAAC-A-TTCAAGACGATCCAT
* ** * *** ** * * * * *
33078176 TAAAACTTATATAGGTGAGAATTATTTCTCTC-TT-GGTTCTTGGATGAACTTCCGAACA--T-G
233 T----CCT-TCCA---G-CAATT-TTTCGAACATTCCATGCTCGG--GAAATTGC-ATCATTTGG
* * ** * ** *** * * *
33078236 TC-AAACT--TTT-ACAAGTTCTTTTATAACTTCG-ATTCCTTAAAACATTCAAGAC-GATCATT
285 TCTAAA-TAGTTTGTC-A-TT-TTGTA-AAC-AAGTTTTGGTTTTGA-ATTAAAAACTTAT-A-T
* * * *** * ** * *
33078295 CCTTCCAGCAA-T-TTTCT-GAAT-ATTCCATGCTCGGGAAATT--GTATCATTTGGTCTAAGTA
341 ACGT-GAG-AATTGTTTCTCCCTTGATT-CTTGGAC--GAACTTACG-A--ACTT-GTC-AA--A
* * * * **
33078354 GTTTGT-C-A-TT-TTGTA-AACAAGTTTTG-GT-CTT--TGC
394 CTTT-TACGAGTTCTTTTATAAC----TTCGATTCCTTAAAAC
* ** *** * * * * * * *
33078388 ATT-AA-A-AATTTATATAGGT-GAG-AATTGTGTCTC--GC--TCGATTCTTCGATGAACTTCC
1 ATTCAAGACGATCCAT-TCCTTCCAGCAATT-T-TC-CAAACATTCCATGC-TCG-GGAAATTGC
* * * * ** ** *
33078444 A-AACTT-GTC-AAACT--TTT-ACAAGTTCTTTTATAAC---TTCGGTTCCTTAAAACATTCAA
60 ATCATTTGGTCTAAA-TAGTTTGTC-A-TT-TTGTA-AACAAGTTTTGTT-CTT-TGA-ATTAAA
* * * * * **** ** * * *
33078500 GAC-GATCCATTCCTTCAAGCAATT-TTTCGAAAATTCCATGCTCGG--GAA-ATTC-AATCATT
117 AACTTAT--A-TACGT-GAG-AATTGTTTC-TCTCTT-GGTTCTTGGACGAACTTTCGAA-C--T
* * * ***
33078559 TGGTCTAAGTAGTTTTTAC--GTT-TTGTA-AAC--AAGTT--TTGGTGA-ATT-AA-A--ATCC
172 T-GTC-AA--A-CTTTTACGAGTTCTTTTATAACTTCAGTTCCTT-AAAACATTCAAGACGATCC
* * * * * * * * * * *
33078611 TATTTACGT-GAG-AATTTTT--ATCCCTT-GATTCTAGGACGAACTTACGA--ACTT-GTC-AA
231 -A-TTCCTTCCAGCAATTTTTCGA-ACATTCCATGCTCGG--GAAATTGC-ATCATTTGGTCTAA
* * * * ** * ** * * * * * * * *
33078667 ACA-TTTATGCGTTCTTTTATAACTTCG-ATTCCTTATAGTATTCAAGAC-GATCCATTCCTTCC
290 ATAGTTTGT-CATT-TTGTA-AAC-AAGTTTTGGTT-TTGAATTAAAAACTTAT--A-TACGT-G
* * ** * * * * * *
33078729 A-ACAATGTTCCAAACATTCATCCTTGG--GAA-AT-CGCATCATTTGATCCAAA-TAGTTTGTC
346 AGA-ATTGTTTC-TCCCTTGATTCTTGGACGAACTTACG-A--ACTTG-T-CAAACT--TTT-AC
* * * * * * *
33078788 -A-TT-TTGTAAAGAAGTT--TTGTCTTTGAATC
401 GAGTTCTT-T-TATAACTTCGAT-TCCTTAAAAC
* * * * *** * * * *
33078817 A---AAAACG-T--ATATACGT-GAG-AATTTT--TTTC-TT-CTTGGTTCTTGGACGAACTTCC
1 ATTCAAGACGATCCAT-TCCTTCCAGCAATTTTCCAAACATTCCAT-G--CTCGG--GAAATTGC
* * * * ** *
33078870 GA--ACTT-GTC-AAACT--TTTATGAGTCCTT-TATAAC---TTCAGTTCCTTATGACATTCAA
60 -ATCATTTGGTCTAAA-TAGTTTGTCA-T-TTTGTA-AACAAGTTTTGTT-CTT-TGA-ATTAAA
* * * * * * * *** * * * ** *
33078925 GAC-GATCATTCCTTCTAGCAATT-TTTCGAACACTCCATGC-TCGAC-AAATGGC-ATCATTTG
117 AACTTAT-A-TACGT-GAG-AATTGTTTC--TCTCTTGGTTCTTGGACGAACTTTCGA--ACTT-
* * * ** * ** * *
33078985 GTCTAAA-TAGTTTGTC-A-TT-TTGTAAAACAAGTTTTGGT-CTT-TGA-ATTAAAAACG-T--
173 GTC-AAACT--TTT-ACGAGTTCTTTTATAAC---TTCAGTTCCTTAAAACATTCAAGACGATCC
*** * ** * ** * * *
33079040 ATATAGGT-GAG-AATTATTCTCGCCCGATT-CTTGGAC--GAACTTTCGA--ACTT-GTC-AAA
231 AT-TCCTTCCAGCAATT-TT-TCGAAC-ATTCCATGCTCGGGAAATTGC-ATCATTTGGTCTAAA
* * * * ** *** * ** * * *
33079096 CT--TTT-ACAAGTTCTTTTATAACTTAG-GTTCCTTAAAACATTCAAGGC-GATCCATTCCTTC
291 -TAGTTTGTC-A-TT-TTGTA-AAC-AAGTTTTGGTTTTGA-ATTAAAAACTTAT--A-TACGT-
* * **** ** * * * * * * * *
33079156 CAGCA-T-TTTCAGAAAATCCATGCTCGG--GAAATTGC-ATCATTTGGCCTAAGTAGTTTT-CC
345 GAGAATTGTTTC--TCCCTTGATTCTTGGACGAACTTACGA--ACTT-GTC-AA--ACTTTTACG
* ** * ** ***
33079215 A-TT-TTGTA-AAC-AAGTTTTGGTTTGTGA-
402 AGTTCTTTTATAACTTCG-ATT-CCTTAAAAC
* ** * * ** * * * * ** *
33079242 ATT-AA-A--ATCCTATT--TACGTGATAATTTT-TATCCCTT-GATTCTAGGACGAGCTTACGA
1 ATTCAAGACGATCC-ATTCCTTCCAG-CAATTTTCCAAACATTCCATGCTCGG--GAAATTGC-A
* ** * ** * * * * *
33079299 --ACTT-GTC-AAA-A-TTT-TACACGTTCTTTATAA-TTTCGATTCATTATAGTATTCAAGA-T
61 TCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTG-TTC-TT-T-GAATTAAAAACT
* * * * * *** ** * * * *
33079355 GATCCATTTCTTCGA-ACAATGTTCCAAACATTCCATCCTCGG--GAA--ATCGCATCATTTGGT
121 TAT--A-TACGT-GAGA-ATTGTTTCTCTC-TT-GGTTCTTGGACGAACTTTCG-A--ACTT-GT
* ** ** * ** * *
33079415 CTAAA-TAGTTTGTC-A-TT-TTGCA-AACAAGTTTTGGT-CTT-TGA-ATT-AAAAC--T-TAT
175 C-AAACT--TTT-ACGAGTTCTTTTATAAC---TTCAGTTCCTTAAAACATTCAAGACGATCCAT
*** * * ** * * * * * *
33079468 ATAGGT-GAG-AATTGTTTC--TCGCTCGATTCTTGGACGAACTTCCGA--ACTT-GTC-AAACT
233 -TCCTTCCAGCAATT-TTTCGAACATTCCATGCTCGG--GAAATTGC-ATCATTTGGTCTAAA-T
* * ** ** * * * * *
33079525 --TTT-ACAAGTTCTTTTATAAC----TTCAGTTCCATAAACATTCAAGAC-GATCCATTCCTTC
292 AGTTTGTC-A-TT-TTGTA-AACAAGTTTTGGTT---TTGA-ATTAAAAACTTAT--A-TACGT-
* * ** * * * * ** * *
33079582 AAGCAATT-TTCCAAACATTCCATGC-TGGAC-AAATGGC-ATCATTTGGTCTAAA-TAGTTTGT
345 GAG-AATTGTTTC-TCCCTT-GATTCTTGGACGAACTTACGA--ACTT-GTC-AAACT--TTT-A
* * * *
33079642 C-A-TT-TTTTA-AACAAGTTTTG-GTCTTTGAATTAAAA
400 CGAGTTCTTTTATAAC----TTCGATTCCTT--A--AAAC
* ** ** ** ** * * * * * * ** *
33079677 ACTTATATAGGTGA-GAATTGTTTCTTGCTTGATTCTTGGACGAAC-TTCGA-ACTTGTCAAGCT
1 A-TT-CA-AGACGATCCATTCCTTCCAGC--AATT-TT--CCAAACATTCCATGCTCGGGAA-AT
** ** * * ** * *** * *** * *** *
33079739 TTTA-CAAGTTCTTTTATAACTGAGGTTCCCTAAAACAT-TCAAGGCGATCCATTCCTTCCAGCA
57 TGCATC-A-TT-TGGTCTAAAT-A-GTT-TGT-CATTTTGTAAACAAGTTTTGTT-CTT--TG-A
** * * ** * * * * *
33079802 ATTTTCCAAACATTCA-ATGC-TCGGGAATTGCATC-AT-TTGG-TCTTTGTA-G--TTTTCCAT
111 A--TTAAAAAC-TT-ATATACGT-GAGAATTGTTTCTCTCTTGGTTC-TTGGACGAACTTTCGAA
* * * * * * * * * ** * ***
33079859 TTTGT-AAACAAGTTTT--GATTTGTGAATTA-AACCATCCTATTTACGTGATAATTTTTATCCC
170 CTTGTCAAAC---TTTTACGAGTTCT--TTTATAA-C-TTC-AGTT-CCTTAAAACATTCAAGAC
* ** * * * ** * **
33079920 TAGATTCTAGGACGAGCTTAC-G-AACTTGTT-AAAC-TTTTACGCGTTCGTTTATAACTT-CTA
226 --GA-TCCA-TTC---CTTCCAGCAA-TTTTTCGAACATTCCATGC--TCG-GGA-AA-TTGC-A
* * * * * ** * ** ***
33079980 TTCCTTATAGTATGAAGAGATCCA-TTTCTTCCCACAATGTTCCAAAC-A-TTCCATCCTCGGGA
277 -TCATT-TGGTCT--A-A-AT--AGTTT-GT----C-ATTTTGTAAACAAGTT--TTGGTTTTG-
** * * * * ** * ** *
33080042 AATCGCATAATTTGGTCTAAC-T-AGTTTTGTCATTTTGTAAACAAGTTTTG-TTCTTTGAATTA
325 AAT-TAAAAACTT-ATAT-ACGTGAGAATTG----TTTCT---C---CCTTGATTC-TTG---GA
** * * ** ** * * ** * * * *
33080104 AAAACTTA-TATACGTGAGAATTGTTTCTCTCTGGGTTCTTGGACGAACTTCGA-ACTTGTCAAA
373 CGAACTTACGA-ACTTGTCAA-ACTTT-T-AC-GAGTTCTTTTA-TAACTTCGATTCCT-TAAAA
33080167 C
431 C
* * * * * *
33080168 TTTTATGAGTTCTTTTACAACTTCATTTCCTTAAAATGTTCAAGATGATCCATTCCTTCCAGCAA
1 ATTCA--AG-------ACGA-TCCA-TTCC--------TTC--CA-G--CAATT--TTCCA--AA
** ** *
33080233 TTTTTCGACATTCCATGCTCGACAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGTAAAC
38 -CATTC--CA-T----GCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC
* * * *
33080298 AACTTTTGGTCTTTGAATTAAAAACGTATATAGGTGAGAATTGTTTCTCTCTCTTGGTTTCTTGG
95 AAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTG-TT-TCTCTCTTGG-TTCTTGG
* * * * * *
33080363 ATGAACTTCCGAACATGTCAGACTTTTACAAGTTCTTTTATAACTTCGGTTCCTT-AAACATTCA
157 ACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCA
* **
33080427 AGACGATCCATTCCTTCCAGCAA-TTTTCTGAATATTCCATGCTCGGGAAATTGTGTCATTTGGT
222 AGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTCCATGCTCGGGAAATTGCATCATTTGGT
* * **
33080491 CTAAGTAGTTTGTCATTTTGT-AACTAGTTTTTTTTCTTTGAATTAAAAACTTATATACGTGAGA
286 CTAAATAGTTTGTCATTTTGTAAACAAG-TTTTGGT-TTTGAATTAAAAACTTATATACGTGAGA
* * * * * * *
33080555 ATTGTTTCTCTCTGGGTTCTTGGACGAACTTTCGAACGTGTCAAACTTTTATGAGTTCTTTTACA
349 ATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTTACGAGTTCTTTTATA
*
33080620 ACTTC-ATTTCCTTAAAAT
414 ACTTCGA-TTCCTTAAAAC
* *
33080638 ATTCAAGATGATCCATTCCTTCCAGCAAATTTT-C-GACATTCCATGCTC--GACAATTGCATCA
1 ATTCAAGACGATCCATTCCTTCCAGC-AATTTTCCAAACATTCCATGCTCGGGA-AATTGCATCA
* * * * *
33080699 TTTGGTCCAAATAGTTTGTCATTTTGT-AACAACTTTTGGTCTTTGAATTAAAAACGTATATAGG
64 TTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACG
* * * *
33080763 TGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* *
33080828 TTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCTGAATATT
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATT
* *
33080892 CCATGCTCGGGAAATTGTATCATTTGGTCTAATTAGTTTGTCATTTTGTAAACAAGTTTTGGTCT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* * * * * * * *
33080957 TTGCATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCAAACT
322 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* * *
33081022 TGTCAAACTCTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* ** *
33081067 ATTCAAGACGATCCATTTCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33081132 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * * * * *
33081195 TGAGAATTTTTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACATTTACGCGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * * * * *
33081260 TTATAACTTC-GATTCCTTATAATATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATT
194 TTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
* ** * * * *
33081324 -CATCCT-GGGAAATCACATCATTTGATC-CAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* * ** * *
33081386 TTGAATCAAAAACGTATATACGTGAGAATTGTTTTTCTTTCTTGGTTCTTGGACGAACTTTCGAA
322 TTGAATTAAAAACTTATATACGTGAGAATTG--TTTCTCCCTTGATTCTTGGACGAACTTACGAA
*
33081451 CTTGTCAAACTTTTACGAGTTCTTTCATAACTTC-AGTTCCTTAAAAC
385 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* *** * ** *
33081498 ATTCAAGACGAT-CATTCCTTCTAGCAATTTTTTGAACACTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33081562 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTCAATTAAAAAATTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* *
33081627 AGAATTGTTTCTCGC-TGGATTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTGT-CAAGTTCT
131 AGAATTGTTTCTCTCTTGG-TTCTTGGACGAACTTTC-GAACTTGTCAAACTTT-TACGAGTTCT
* * * * * *
33081689 TTTATAACTT-AGGTTTCTTAAAACATTCAAGTC-ATCCATTCCTTCCAGTAATTTTCCAAAAAT
193 TTTATAACTTCA-GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
* * *
33081752 TCCATGCTCGGTAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTCTGTAAACAAGTTTTGGT
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGT
* * * * * * * *
33081816 TTGTGAATTAAAATCCTATTTACGTGATAATT-TTTATCCCTTGATTCTAGGACGAGCTTATGAA
321 TT-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAA
* * * * **
33081880 CTTGTCAAAATTTTACGCGTTCCTTTATAACTTCGATTCCTTATAGT
385 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * * *
33081927 ATTCAAGACGATCCATTTCTTCGAACTATGTTCCAAACATTCCATCCTCGGGAAATCGTAACATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
33081992 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATT-AAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * *
33082056 AGAATCGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * * *
33082121 ATAAATTCGGTTCCTTAAAACATTCAAGAGGATCCATTCCTTCCAGCAA-TTTTCTGAATATTCT
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTCC
* * * *
33082185 ATGCTCGGGAAATTGTATCATTTGGACTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTAT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * * * * *
33082250 GCATTAAAAACTTATATAAGTGAGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCGAACTTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * * * * *
33082315 CCAAACCTTTACAAGTTCTTTCATAACTTTGGTTCCTTAAAAC
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * *
33082358 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAATATTCCATGCTCGAGAAATTGGATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33082423 TGGTTTAAGTAGTTT-TCCATTTTCTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * * * * * **
33082486 TGATAGTT-TTTATCCCTTGATTCTAGGATGAACTTACGAACTTGTCAAACTTTTACGCTTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* ** * * * *
33082550 TTATAACTTC-GATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATT
194 TTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
* * * * * *
33082614 -CATCCTCGGGAAATCGCATCATTTGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* * ** * *
33082678 TTGAATCAAAAACTTATATGCGTGAGAATTGTTTCTTTCTTGGTTCTTGGACGAACTTCCGAACT
322 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* *
33082743 TGTCAAACTTTTACGAGATCTTTTATAACTTC-AGTTCCTCAAAAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * ** * * ** *
33082788 ATTCGAGACGAT-CATTCCTTCTAGCAATTTTTCGGACACTCCATGCTTGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33082852 TGATCTAAATAGTTTGTCATTTTGAAAAACAAGTTTTGGTCTTTGAATTAAGAACTTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTG-TAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * *
33082917 GAGAATTGTTTCTCGCTCGATTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * *
33082982 TATAACTT-AGGTTCCTTAAAACATTCAAGGCGATCCATTCCTTCCACCAA-TTTTCTGAAAATT
195 TATAACTTCA-GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATT
*
33083045 CCATGCTCGGGAAATTGCATCATTTGGT-TAAAGTAGTTT-TCCATTTTGCAAACAAGTTTTGGT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAA-TAGTTTGT-CATTTTGTAAACAAGTTTTGGT
* * * * * * * * *
33083108 TTGTGAATTAAAATCCTATTTACGTGATAATT-TTTATTCCTTCATTCTAGGACGAGCTTACGAA
321 TT-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAA
* * **
33083172 CTTGTCAAAATTTTAC-ACGTTCTTTTATAACTTCGATTCCTTATAGT
385 CTTGTCAAACTTTTACGA-GTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33083219 ATTGAAGATGATCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33083284 TGGTCTAAATAGTTTGTCATTTTGCAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33083349 AGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * * *
33083414 ATAACTTCAGTTCCATAAAACATTCAAGACGATCAATTCCTTCAAGCAATTTTCCAAACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
* *
33083479 TGC-CGGACAAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTGTTT
261 TGCTCGG-GAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * * *
33083543 GAATT-AAAACTTATATAGGTGAGAATTG-TTATCGCTTGATTCTTGGACGAACTTCCGAACCTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * * *
33083606 TCAAACTTTTATGAGTTCTTTTACAACTTC-ATTTCTTTAAAAT
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * * **
33083649 GTTCAAGATGATCCATTCCTTCCAGCAATTTTTC-GACATTCCATGCTCGACAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33083713 TGGTCCT-AATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACGTATATAGGT
66 TGGT-CTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * *
33083777 GAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * *
33083842 TATAACTTCGGTTCCTTAAAACATTCAAGATGATCCATTCCTTCCAGCAATTTTTTGAATATTCC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
* *
33083907 ATGCTCGGGAAATTGTATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * * * * * *
33083972 GCATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCAAACTTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * *
33084037 TCAAACTCTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAAC
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
** *
33084080 ATTCAAGACGATCCATTCCCTTCCAGCAATTTTCTGAATATTCCATGCTC-GGAAATTGCATCAT
1 ATTCAAGACGATCCATT-CCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * * * *
33084144 TTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTAC
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATAC
* * * * * * *
33084207 GTGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACATTTACGCGTTCT
128 GTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* ** * * *
33084271 TTTATAACTTC-GATTCCTTATAGTATTC-AGATGATCCATCCTTCCTTCCA-CAA-TGTTCCAA
193 TTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCA---TTCCTTCCAGCAATTTTTCGAA
* * * * *
33084332 AATT-CATCTCTCGGGAAATT-CATTTGAATATTTTGAT-TCAAAT-GTTT-TCAATTTATGT-T
254 CATTCCAT-GCTCGGGAAATTGCA--T---CA-TTTGGTCT-AAATAGTTTGTC-ATTT-TGTAA
** * * * ** *
33084391 TTAAG-TTT-CTTTT--ATTCAAAAACGTATA-ACGTGAGAATTATTTCTTTCTTGGTT-TGTGA
309 ACAAGTTTTGGTTTTGAATT-AAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCT-TG-
* *
33084450 CGAACGAGACTTTCGAACTTGTC--ACTTTTACGAGTTCTTTCATAACTTC-AGTTCCTTAAAAC
371 -G-ACGA-ACTTACGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * * ** *
33084512 ATTCAAGACGAT-CATTCCTTCTAGCAATTTTTCGAACACTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33084576 TGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAAATTATATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * *
33084641 GAGAATTGTTTCTCGC-TGGATTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTTCAAGTTCT
130 GAGAATTGTTTCTCTCTTGG-TTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCT
* * * * *
33084704 TTTATAACTT-AGGTTCCTTAAAACATTCAAGGCAATCCATTCCTTCCAGCAATTTTCCAAAAAT
193 TTTATAACTTCA-GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
*
33084768 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGT
* * * * * * * * *
33084832 CTGTGAATTAAAATCCTATTTACGTGATAATT-TTTATCCCTTGATTCTAGGACGAGCTTATGAA
321 -TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAA
* * * * **
33084896 CTTGTCAAAATTTTACGCGTTCCTTTATAACTTCGATTCCTTATAGT
385 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33084943 ATTCAAGACGATACATTTCTTCGAACAATGTTCC-AACATTCCATCCTCGGGAAATCGCAACATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
33085007 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATT-AAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* *
33085071 AGAATCGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTC
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33085136 ATAACTTCAGTTCCTTAAAAGATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTCCT
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
** *
33085200 TGCTCGACAAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTT
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGGT-TTT
* * * * * * *
33085265 CAATTAAAAAATTACATAGGTTAGAATTGTTTCTCGCTGGATTCTTGGACGAACTT-CTGAACTT
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTAC-GAACTT
* * * *
33085329 GTCAAACTTTTTCAAGTTCTTTTATAACTTAGGTTCCTTAAAAC
388 GTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * *
33085373 ATTCAAGGCAATCCATTCCTTCCAACAATTTTCCAAAAATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33085438 TGGTCTAAGTAGTTT-TCCATTTAGTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTAGG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * * * *
33085501 TGATAATT-TTTATC-CTTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTTAACGCGTTCT
129 TGAGAATTGTTTCTCTC-TTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT
* ** * * * * * *
33085564 TTTATAACTTC-GATTCCTTATAGTATTCAAGATGATCCATTCCTTCCAACAATGTTCCAAATAT
193 TTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
* ** * * * * *
33085628 T-CATCCTCGGGAAATCACATCAGTTGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTTGTT
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAG-TTTTGGT
** * ** * *
33085692 CTTTGAATCGAAAACCT-TATACGTGAGAATTGTTTCTTTCTTGGTTCTTGGACGAACTTTCGAA
321 -TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAA
* * *
33085756 CTTGTCAAACTTTTATGAGTTCTTTCATAACTTC-AGTTCCTTAAAAG
385 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * * ** *
33085803 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTCCTTGCTCGTCAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33085867 TGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAAATTACATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * *
33085932 TAGAATTGTTTCTCGC-TGGATTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTTCAAGTTCT
130 GAGAATTGTTTCTCTCTTGG-TTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCT
* * * * * *
33085995 TTTATAACTT-AGGTTCCTTAAAACATTCAAGGCAATCCATTCCTTCCAACAATTTTCCAAAAAT
193 TTTATAACTTCA-GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
*
33086059 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGT
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGT
* * * * * * * * * *
33086123 TTGTGAATTAAAATCCTATTTAGGTGATAATT-TTTATCCTTTGATCCTAGGACGAGCTTACGAA
321 TT-TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAA
* * * **
33086187 CTTGTCAAACTTTTACGCGTTCTTTTATAACTTCAATTCCTTATAGT
385 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * *
33086234 ATTCAAGACGATCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTTGGGAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* *
33086299 TGGTCTAAATAGTTTCTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGCG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* *
33086364 AGAATTGTTTCTCTCTTGGTTCTTGGACGAGCTTTCGAACTTGTCAAACTTTTACAAGTTCATTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTC-TTT
* *
33086429 TATAACTTCAGTTCCATAAAACATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCCAACATTCC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
* ** * *
33086493 ATGCTTGACAAATGGCATCATTTGGTCTCAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * *
33086558 GAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAACTTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * * *
33086623 TCAAACTTTTACAAGTTCTTTGATAACTTAGGTTCCTTAAAAC
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * *
33086666 TTTCAAGGCGATCCATTCCTTCAAGCAATTTTTCAAACATTCAATGCTTGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* ** * * *
33086731 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-AGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * * * * * *
33086794 TGATAATT-TTTATC-CTAGATTCTAGGATGAGCTTACGAACTTGTCAAACTTTTACGCGTT-TG
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT-
* * * ** * * * * * * *
33086856 TTTATCACTTCTA-TTTCTTATAGTATTGAAGACGATCCATTTCTTCAAACAATGTTCCAAACAT
193 TTTATAACTTC-AGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
* * * * *
33086920 TCCATCCTCGGGAAATCGCATAATTTGGTCTAACTAGTTTGTCATTTTGTAAACAAGTTTTGCTC
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-
* * * * * *
33086985 TTTGAATTAAAAACTTATATACGTGAGAAAAT-TTTCTCTCTGGGTTCTTGGACGAACTTTCAAA
321 TTTGAATTAAAAACTTATATACGTGAG-AATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAA
* *
33087049 CTTGTCAAACTTTTAGGAGTTCTTTTATAACTTCGGTTCCTTAAAAC
385 CTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * ** *
33087096 GTTCAAGACGTTCCATTCCTTCCAACAATTTTCTGAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33087161 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * *
33087224 TGAGAATT-TTATC-C-CTTGATTCTAGGACGAACTTAT-GAACTTATCAAACTTTTACGCA-TT
129 TGAGAATTGTT-TCTCTCTTGGTTCTTGGACGAACTT-TCGAACTTGTCAAACTTTTACG-AGTT
* *** * * *
33087284 CTTTTATAACTTC-GATTCCTTATAGTGTTCAAGACGATCCATTCCTTCCAAC-ATTGTTCCAAA
191 CTTTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATT-TTTCGAA
* * * * *
33087347 CATTCCATCCTCGGGAAATTGTATCATTTGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTTG
254 CATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTG
* * * * * * ** *
33087412 TTCTTTGAATCAAAAACTTATATGCGTGAGAATTATTTCTCTCTTGGTTCTTGGAATAACTTCCG
319 GT-TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACG
33087477 AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-AGTTCCTTAAAAC
383 AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* ** *
33087526 ATTCAAGACGAT-CATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33087590 TGGTCTACATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAACTTAAATAGGT
66 TGGTCTAAATAGTTTGTCATTTTGT-AAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* *
33087655 GAGAATTGTTTC-CCCTCGGTTCTTGGACGAAC-TTCTGAACTTGTCAAACTTTTACGAGTTCTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGAGTTCTT
* * *
33087718 TCATAACTTCAGTTCCTTAAAAGATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTC
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTC
* * ** *
33087782 CTTGCTTGACAAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAATACAAGTTTTGGTCT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAA-ACAAGTTTTGGT-T
* * * * * * *
33087847 TTCAATTAAAAAATTACATAGGTTAGAATTGTTTCTCGCTGGATTCTTGGACGAACTT-CTGAAC
322 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTAC-GAAC
* * * *
33087911 TTGTCAAACTTTTTCAAGTTCTTTTATAACTTAGGTTCCTTAAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * *
33087957 ATTCAAGGCAATCCATTCCTTCCAACAATTTTCCAAA-ATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33088021 TGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTCTGTGAATTAAAATCCTATTTAGGT
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * * * * * *
33088085 GATAATT-TTTATC-CTTTGATTCTAGGACGAGCTTACGAACTTGGCAAACTTTTACGCGTTCTT
130 GAGAATTGTTTCTCTC-TTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* * ** * * * * * * *
33088148 TTATAACTTCAATTCCTTATAGTATTCAAGACGATCTATTTCTTCGAACAATGTTCCAAACATTC
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTC
* * *
33088213 CATCCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTCTCATTTTGTAAACAAGTTTTGTTCTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TT
* * * * *
33088278 TGAATTAAAAACTTATATACGCGAGAATTGTTTCTCTCTTGGTTCTTGGACGAGCTTTCGAACTT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTT
* *
33088343 GTCAAACTTTTACAAGTTCATTTTATAACTTC-AGTTCCATAAAAC
388 GTCAAACTTTTACGAGTTC-TTTTATAACTTCGA-TTCCTTAAAAC
* ** *
33088388 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTTCATGCTCGACAAATGGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33088453 TGGTCTCAATAGTTTCTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * *
33088518 AGAATTGTTTCTCGCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * * *
33088583 ATAACTT-AGGTTCCTTAAAACTTTCAAGGCGATCCATTCCTTCAAGCAATTTTTCAAACATTCA
196 ATAACTTCA-GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
* *
33088647 ATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTT-TAAACAAGTTTTGGTTAG
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTT-T
* * * * * * * * * *
33088710 TGAATTAAAATCCTATTTACGTGATAATTTTTTATCCCTAGATTCTAGGATGAGCTTACGAACTT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTT
* * * * * * **
33088775 GTCAAACTTTTACGTGTTTGTTTTATCACTTCTATTTCTTATAGT
388 GTCAAACTTTTACGAG-TTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * ** *
33088820 ATTGAAGACGATCCATTTCGT-CAACAATGTTCCAAACATTCTATCCTC-GGAAATCACATAATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* *
33088883 TGGTCTAACTAGTTTGTCATTTTGTAAACAAGTTTTGCTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * *
33088948 AGAAAAT-TTTCTCTCTGGGTTCTTGGACGAACTTTCAAACTTGTCAAACTTTTAGGAGTTCTTT
131 AG-AATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * *
33089012 TATAACTTCGGTTCCTTAAAACGTTCAAGACGTTCCATTCCTTCCAGCAA-TTTTCTGAACATTC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTC
* *
33089076 CATGCTCGAGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT
* * * * * *
33089140 GTGAATTAAAATCCTATTTACGTGAGAATT-TCTATCCCTTGATTCTAGGACGAACTTACGAACT
323 -TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* * **
33089204 TGTCAAACTTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGT
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * *
33089249 ATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
*
33089314 TGGTCTAAATAGTTTCTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * *
33089379 AGAATTGTTTCTCTCTCTGGTTCTTGGAAGAACGTCCGAACTTGTCAAACTTTTAAGAGTTCTTT
131 AGAATTGTTTCTCTCT-TGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * *
33089444 TATAACTTCAGTTCGTTAAAATAATCAAGACGATCCATTCCTTCTAGCAA-TTTTCTGAACATTC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTC
** * * * * * *
33089508 CATGCTCGACAAATCGCATCATTTGTTCTAAATAGTTTGTTACTTTGTACACAAGTTTTGGTCCT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TT
* * * * *
33089573 TGAATTAAAACCTTATATAGGTGAGAATTATTT-TGCACTCGATTCTTGGACGAACTT-CTGAAC
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCT-CCCTTGATTCTTGGACGAACTTAC-GAAC
* * * *
33089636 TAGTCAAACATTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * ** * * *
33089682 GTTCAAGACAATCCATTCCTTCCAGGAATTTTCTGAATATTCCATGCTCGGGAAATTGTATTATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * *
33089747 TGGTTTAAGTTGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGCATTAAACACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * **
33089812 AGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACTTGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * * * *
33089877 ATAGCTTTAATTCCTTAAAACATTCAGGACGATCCATTCCTTCCAGCAATTTTTTGAAAATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
* *
33089942 TGCTCCGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGT
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT-T
* * * * * * * * * *
33090006 GAATTAAAATCCTATTTATGTGATAATT-TTTATCCCTAGATTCTAGGATGAGCTTACGAACTTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * * * **
33090070 TCAAACTTTTACGCGTTCATTTATAACTTCTATTCCTTATAGT
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * * *
33090113 ATTGAAGACGATCCATTTCTTCCAACAATGTTCCAAACATTCCATCCTCAGGAAATCGCATAACT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33090178 TGGTCTAACTAGTTTGTCATTTCGTAAACAAGTTTTGTTCTTGGAATTAAAAACTTATATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * ** * * *
33090243 AGAA-AGTTTTCTCTCTGGGTTCTTGGATAAACTTTCAAATTTGTCAAACTTTTAGGAGTTCTTT
131 AGAATTG-TTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * *
33090307 TATAACTTCGGTTCCTTAAAACATTCAAGATGTTCCATTCCTTCCAGCAA-TTTTCTGAACATTC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTC
* * *
33090371 CATGCTCGAGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTCTAAACAAGTTTTGGTTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT
* * * * *
33090435 GTGAATTAAAATCCTATTTACGTGAGAATT-TTTATCCCTTGATTCTAGGA-GAACTTACGAACT
323 -TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* * * ****
33090498 TGTCAAACTTTTAAGCGTTCTTTTATAACTTCGATGCCTTATCGT
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * **
33090543 ATTCAAGACGATCCATTCCTTCCAAC-TTTGTTCCAAACATTCCATCCTCGGGAAATCACATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATT-TTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * * * * * *
33090607 TTGATCCATATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATGAAACACTTATATGCGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* *
33090672 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33090737 TATAACTTCAGTTCCTTAAAACATTCAAGACGAT-CATTCCTTCCAGC-ATTTTCCGAACATTCC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
** *
33090800 ATGCTCGACAAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTGTTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * *
33090865 GAAGTAAAAACTTATATACGTGAGAATTGTTTCTCGCTCGATTCTTGGACGAAATTTTGAACTTT
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACG-AA-CTT--AC---
** * * * *
33090930 TTCACTTCTCAAACTTTTACAAGTTCTTTTATAACTTC-AGTTTCATAAAAC
382 -GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* *
33090981 ATTCAAGACGATCCATTCCTTTCAGCAATTTTCCGAACATTCCATGCTCGGGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * *
33091046 TGGTCTCAATAGTTT-TGCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAATCCTATTTACA
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * * ** * * * *
33091109 TGATAATT-TTTATCCCTAGATTCGAGGACGAGCTTACAAACTTGTCAAACTTTTAC-ACGTTCG
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGA-GTTCT
* ** * * * * *
33091172 TTTATAACTTCTA-TTCCTTATAGTATTCAAGACGATCCATTTCTTCCAACAATGTTCCAAACAT
193 TTTATAACTTC-AGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACAT
* * * * * *
33091236 TCCATCCTCAGGAAATTGCATAATTTGGTCTAACTGGTTTGTCATTTTGTAAACAAGTTTTGTTC
257 TCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-
** * * * * * *
33091301 TTTGAATTAAAAACTTATATTGGTGAGAATTGTTTCTCTCTGGGTTATTGGACGAACTTTCAAAC
321 TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAAC
* * *
33091366 TTGTCAAACTTTTCCGAGTTCTTTTATAACTTTGGTTCCTTAAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * ** *
33091412 GTTCAAGACGTTCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGAGAAATTGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * *
33091477 TGGTCTAAGTAATTT-TCCATTTTGTAAACAAGTTTTGGTT-TTTGAATTAAAATCCTATTTACG
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTATATACG
* * * * ** *
33091540 TGAGAATT-TTTATCCCTTGATTCTAGGAAAAACTTACGAACTTGTCAAACTTTTAC-ACGTTCT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGA-GTTCT
* * *** * * * *
33091603 TTTATAGCTTC-GATTCCTTATAGTGTTCAAGACGATCCAATCCTTCCA-AAAATGTTCGAAACA
193 TTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCG-AACA
* * * * * *
33091666 TTCCATCCTC-GGAAATTACATCATTTGATCCAAATAGTTTGTCATTTTGTAAAGAAG-TTTGTT
256 TTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT
* * * *
33091729 CTTTGAATCAAAAACTTATATACGTGAGAATTGTTTCTCTCTTTGGTTCTTGGACGAACTTCCGA
321 -TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTC-CCTTGATTCTTGGACGAACTTACGA
33091794 ACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-AGTTCCTTAAAAC
384 ACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
*** ** *
33091842 ATTCAAGACGATCCATTCCTTCCAGCAATTTTATGAACATTCCATGCTCGTCAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33091907 TGGTCTATATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * ** *
33091972 AGAATTGTTTCTCGCTCGATTCTTGGA-TAAAGTTCTGAACTTGTCAAACCTTTAC-ATGTTCTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTC-GAACTTGTCAAACTTTTACGA-GTTCTT
* * *
33092035 TTATAACTTCTGTTCCTTAAAACATTCAAGACAATCCATTCCTTCCAGCAATTTTCCGAACATTC
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTC
* * * * *
33092100 CATACTCGGGAAATTGCATCGTTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTATGCTTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT
* * * * * * * *
33092164 GTGAATTAAAATCCTATTTACGTGATAATT-TTTATTCCC-TGATTCTAGGACGAGCTTAC-AAA
323 -TGAATTAAAAACTTATATACGTGAGAATTGTTT-CTCCCTTGATTCTTGGACGAACTTACGAAC
* * * **
33092226 TTGTCAAACTTTTACGCA-TTTTTTTA-AACTTCTATTCCTTATAGT
386 TTGTCAAACTTTTACG-AGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * * * * *
33092271 ATTCAAGATGATCCATTTCTTCGAAC-ATTGTTGCAAACATTCCATCCTCGGGAAATCGTATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAATT-TTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * *
33092335 TTGGTCTAAATAGTTTGTCACTTTGTAAATAAGTTTTGTTCTTTTAATTAAAAACTTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * *
33092400 GAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACGAGTTGTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
*
33092465 TATAACTTCAGTTCCTTAAAACATTCAAGATGAT-CATTCCTTCCAGCAA----T------TT--
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
33092517 -T-C-C--G-AA---CATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * * * * * *
33092573 GAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCTG-TTGTTGGATGAACTTCCAAACCT
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCT-TGATTCTTGGACGAACTTACGAACTT
* *
33092637 GTCAAACTTTTACGAGTTATTTTATAACTTC-AGTTCCTTAAACC
388 GTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * * * * ** *
33092681 ATTCAAGACTATCCATTCCATCCAGTAATTTTTCGAACATTCCATTCTCGACAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * *
33092746 TGGCCTAAATAGTTTGTCATTTCGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33092811 AGAATTGTTTGC-CTCTTGGTTCTTGGATGAACTTCCAAATTTGTCAAACTTTTACAAGTTCTTT
131 AGAATTGTTT-CTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
* * * *
33092875 TATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCATCTAGCAA-TTTTCTGAATATTC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTC
* *
33092939 CATGCTCGGGAAATTGTATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT
* * * * * * * *
33093003 GTGAATTAAAATCCTATTTACATTAGAATT-TTTATCCCTTGATTCTCGGACGAACTTATGAACT
323 -TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* *
33093067 TGTCAAACTTTTACGTGTTCTTTTATAACTTCGATTCCTT-ATAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
* * * * *
33093111 AATTCAAGATGATCCATTCCTTCCAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATCAT
1 -ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
** ** * * *
33093176 TTTATCCCAATAGTTTGTCATTTTGTAAAGAAGTTTTGTTCTTTGAATCAAAAAATTATATACGT
65 TTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * *
33093241 AAGAATTGTTTCTCCCTTGGTTCTTGGACGAACTTCCGAACTCGTCAAACTTTTACGAGTTCTTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTT
33093306 TATAACTTCAGTTCCTTAAAACATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACATTCC
195 TATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCC
*** ** * *
33093370 ATGCTCAACAAAAGGTATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTT
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTT
* * ** * * * * *
33093435 GAATTAAAAACTTATATAGGTGAGAATTATTTCTCGATCGGTTCTTGGATGAACTTCCGAACTTC
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
*
33093500 TCAAACTTTTACAAGTTC-TTT-TAACTTCGATTCCTTAAAAC
389 TCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
**
33093541 ATTCAAGACGATCCATTCCTTCCAGCAATTTTTTGAAA-ATTCCATGCTCGGGAAATTGCATCAT
1 ATTCAAGACGATCCATTCCTTCCAGCAA-TTTTCCAAACATTCCATGCTCGGGAAATTGCATCAT
* * * * * *
33093605 TTGGTC-AAGTGGTTT-TCCATTTTGTAAACAAGTTTTGGTT-TGTGAATTACAATCCTAGT-TA
65 TTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTT-GTTCTTTGAATTAAAAACTTA-TATA
* * * * * * * *
33093666 AGTTAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACAAACTTGTCAAACTTTTACGCA-TT
127 CGTGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTT
* * * ** * * * *
33093729 CTTTTTTAACTTC-GATTCGTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAAC
191 CTTTTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAAC
** * *
33093793 ATTCCAACCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTCGTAAACAAGTTTTGT
255 ATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGG
* * * * * *
33093858 TCTTTGAGTTAAAAACTTATATACGTGAGAATTGTTTCTCACTAGATTCTTGGATGAACTTTCAA
320 T-TTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGA
* *
33093923 ACTTGTCAAACTTTTACAAGTTCTTGTATAACTTC-AGTTCCTTAAAAC
384 ACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * *** * * *
33093971 ATTCAAGATGATCCATTCCATCCAACAATTTTTTGAACATTCCATTCTCGGCAAATCGCATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * *
33094036 TGGTCTAAAGAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTCTATACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * **
33094101 AGAATTGTTTCTCTCTGGGTTCTTGGACGAACTTTCAAACTTGTCAAACTTTTACGAGGCCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * * *
33094166 ATAACTTCGGTTCCTTAAAACATTCAAGATGATCCATTCCTTCCATCAATTTTCCGAACATTCCA
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
* * * *
33094231 TGCTCGAGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAATTTTTTGTTTGT
261 TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT-T
* * * * * *
33094295 GAATTAAAATCCTATTTACGTGAGAATT-TTTATCCATTGATTCTAGGACGAACTTACGAACTTG
324 GAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTG
* * * * **
33094359 TCTAACATTTACGCA-TTCTTTTATAACTACGATTCCTTATAGT
389 TCAAACTTTTACG-AGTTCTTTTATAACTTCGATTCCTTAAAAC
* * **
33094402 ATTCAAGATGATCCATTCCTTCCAAG-AATGTTCCAAACATTCCAT-CGTCGGGAAATCACATCA
1 ATTCAAGACGATCCATTCCTTCC-AGCAATTTTCCAAACATTCCATGC-TCGGGAAATTGCATCA
*
33094465 TTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACA
64 TTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACG
* * * *
33094530 TGAGAATTGTTTCTCTCTGGGTTCTTGGACTACCTTTCGAAGTTGTCAAACTTTTACGAGTTCTT
129 TGAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTT
* *
33094595 TTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCTAGCAATTTTTCGAACATTC
194 TTATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTC
* * ** *
33094660 CATGCTCGAGAAATCGCATCATTTCATCGAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTT
259 CATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-TT
* * * * * * * *
33094725 TGAATTATAAACTTATTTACATGAGAATAGTTTCTCTC-TGTTTCTTGGACAAAC-TACCAAACT
323 TGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTA-CGAACT
*
33094788 TGTCAAACTTTTACGAGTTCTTTTATAACTT-TAGTTCCTTAAAAC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * * * *
33094833 ATTCAAGACAATCCATTCCTTCCTGCAATTTTTCGAACATTCCATGCTCGAGAAATTGAATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
* * * * * * * *
33094898 TGGTGTAAGTAGTTT-TCCATTTTATAAACAAGTTTTGGT-TATGAATTAAAATCCTATTTACGT
66 TGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGT
* * * * * * * *
33094961 GAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAAGTTTTCAAAGTTTTACGCA-TTCTT
130 GAGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACG-AGTTCTT
* * ** * * * *
33095024 TTATAAATTC-GATTCCTTATAGTATTCAAGATGATCCATTCTTTCCAACAATGTTTCGAACATT
194 TTATAACTTCAG-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATT
* * * * * * *
33095088 CCATCCTCGAGAAATCGCATCGTTTGATCTAAATAGTTTGTCAATTTGTAAACAAGTTTTGTTCT
258 CCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGT-T
* *
33095153 TTGAATTAAAAACTTATATACGTGAGAATTGTTTC-CCTCTTGGTTCTTGGACGAACTTTCGAAC
322 TTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCC-CTTGATTCTTGGACGAACTTACGAAC
33095217 TTGTCAAACTTTTACGAGTTCTTTTATAACTTC-AGTTCCTTAAAAC
386 TTGTCAAACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAAC
* * * **
33095263 ATTCAAGACGATCCATTCCTTCAAGCAATTTTCCAAAGATTCCATGCTCGAGAAATCACATCATT
1 ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
** * * * * *
33095328 TCATCGAAAGAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTACAAACTTATTTACGTG
66 TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
* * * * *
33095393 AGAATAGTTTCTCTCTTGTTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTT
131 AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
* * *
33095458 ATAACTTCGGATCCTTAAAATATTCAAGACGA-CCATTCCTTCCAGCAA-TTTTCTGAACATTCC
196 ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTC-GAACATTCC
* *
33095521 ATGCTC-GGAAATTGTATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTG
260 ATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACAAGTTTTGGTTT-
* * * * * *
33095584 TGAATTAAAATCCTAT-TCACGTGAGAATT-TTTATCCCTTGATTCTAGGATGATCTTACGAACT
323 TGAATTAAAAACTTATAT-ACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACT
* * * *
33095647 TGTCTAACATTTATGCGTTCTTTTATAACTTCGATTCC
387 TGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCC
33095685 AAGGCACCAA
Statistics
Matches: 29965, Mismatches: 5366, Indels: 3019
0.78 0.14 0.08
Matches are distributed among these distances:
407 67 0.00
408 19 0.00
409 27 0.00
410 212 0.01
411 18 0.00
413 1 0.00
414 2 0.00
415 1 0.00
418 2 0.00
420 1 0.00
421 2 0.00
422 5 0.00
423 16 0.00
424 54 0.00
425 104 0.00
426 364 0.01
427 678 0.02
428 2303 0.08
429 4591 0.15
430 6460 0.22
431 6630 0.22
432 3713 0.12
433 767 0.03
434 1146 0.04
435 384 0.01
436 179 0.01
437 85 0.00
438 239 0.01
439 249 0.01
440 160 0.01
441 11 0.00
442 7 0.00
443 4 0.00
444 9 0.00
445 10 0.00
446 11 0.00
447 22 0.00
448 14 0.00
449 16 0.00
450 15 0.00
451 28 0.00
452 16 0.00
453 25 0.00
454 12 0.00
455 26 0.00
456 28 0.00
457 19 0.00
458 29 0.00
459 25 0.00
460 27 0.00
461 57 0.00
462 55 0.00
463 48 0.00
464 45 0.00
465 65 0.00
466 49 0.00
467 43 0.00
468 29 0.00
469 20 0.00
470 37 0.00
471 35 0.00
472 23 0.00
473 16 0.00
474 8 0.00
475 31 0.00
476 16 0.00
477 16 0.00
478 10 0.00
479 7 0.00
480 5 0.00
481 7 0.00
482 11 0.00
483 14 0.00
484 16 0.00
485 11 0.00
486 8 0.00
487 3 0.00
488 21 0.00
489 18 0.00
490 11 0.00
491 12 0.00
492 17 0.00
493 7 0.00
494 12 0.00
495 10 0.00
496 6 0.00
497 3 0.00
498 4 0.00
499 11 0.00
500 17 0.00
501 12 0.00
502 6 0.00
503 3 0.00
504 11 0.00
505 9 0.00
506 7 0.00
507 15 0.00
508 13 0.00
509 15 0.00
510 10 0.00
511 12 0.00
512 21 0.00
513 20 0.00
514 18 0.00
515 27 0.00
516 10 0.00
517 15 0.00
518 9 0.00
519 7 0.00
520 12 0.00
521 10 0.00
522 10 0.00
523 3 0.00
524 12 0.00
525 5 0.00
526 2 0.00
527 1 0.00
528 3 0.00
ACGTcount: A:0.28, C:0.19, G:0.14, T:0.39
Consensus pattern (431 bp):
ATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATT
TGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTG
AGAATTGTTTCTCTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTT
ATAACTTCAGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTCGAACATTCCA
TGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTTTTGA
ATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTC
AAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAAC
Found at i:33076728 original size:646 final size:645
Alignment explanation
Indices: 33074497--33095684 Score: 17272
Period size: 646 Copynumber: 32.6 Consensus size: 645
33074487 TAAGTAGTTT
* * *
33074497 TCCATTCCTTCCAGCAATGTTTCG-ACATTCCATGCTCGACAAATTGCATCATTTGGTCCAAAAA
1 TCCATTCCTTCCAGCAAT-TTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * *
33074561 GTTTGTCCTTTTGTAAAAAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTATTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * * * *
33074626 TCTCTTGGTTCTTGGATGAACTTCGGAACATGTCAAACTTTTACAAGTTCTTTTATAACTTCGAT
130 TCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* * * *
33074691 TCCCTAAAACATTCAAGACTATCCATTCCTTCCAGCAATTTTCAGAATATTCCATGCTCGGAAAA
195 TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGG-AAA
* * * *
33074756 TTGTATCATCTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTT-TGCACTAAAAAC
259 TTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAAAC
* * * * * *
33074820 TTATATAGGAGAGAATTGTTTTCTCGCTCGGTTCTTGGATGAACTT-CTGAACTTGTCAAACTTT
323 TTATATACGTGAGAATTG-TTTCTCCCTTGATTCTTGGACGAACTTAC-GAACTTGTCAAACTTT
* * * *
33074884 TACAAGTTCTTTTATAACTTCGGTTTCCTTAAAACATTCAAGACGATCCATTCCTTCTAGCAA--
386 TACGAGTTCTTTTATAACTTC-GATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATT
* *
33074947 -T-------TT---T--TC-GAAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAAC
450 TTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAAC
* * * * * * * * *
33074997 AAGTTTTGGTT-TGTGAATTAAAATCCTATTTACTTGATAATT-TTTATCCCTTGATTCTAGGAC
514 AAGTTTT-GTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGAC
* * * * **
33075060 GAGCTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTC-GATTCCTTATAGTATTCAA
577 GAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAG-TTCCTTAAAACATTCAA
33075124 GACGA
641 GACGA
* * * * * * *
33075129 TCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTCGAGAAATTGCAACATTTGGTCTAAATA
1 TCCATTCCTTCCAGCAAT-TTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
*
33075194 GTTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * *
33075259 TCTCTTGGTTCTTGGACGAACTTCCGAAC-TGTCAAACTTTTACAAGTTCTTTTATCACTTCGGT
130 TCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* * *
33075323 T-CTTGAAAACATTCAAGACGATCCATTCCTTCCAGTAATTTTCTGAATATTCCATGCTCGGGAA
195 TCCTT-AAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-GGAA
* * * * ** *
33075387 ATTGTATCATTAGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTAGGTCTACGCATTAAAAAC
258 ATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAAC
* * * *
33075452 TTATATAAGTGAGAATTGTTTCTCGCTCGGTTCTTGGACGAACTT-CTGAACTTGTCAAACTTTT
323 TTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTAC-GAACTTGTCAAACTTTT
* * * * **
33075516 ACAAGTTCTTTTTATAACCTC-AGTTCCATAAAACATTCAAGACGATCCATTCCTTTCAGTAATT
387 ACGAGTTC-TTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATT
* * ** * * *
33075580 TTTCGAACATTCCATGCTCGACAAATGGCTTCATTTGGTCTAAATAGTTTGTTATTTTGTAAACA
450 TTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACA
* * *
33075645 AGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGATTTCTTGGACG
515 AGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGA-TTCTTGGACG
* * *
33075710 AAC-TTCTGAACTTGTTAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAG
578 AACTTTC-GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAG
33075774 ACGA
642 ACGA
* * * * *
33075778 TCCATTCCTTCCAGTAATTTTTCGAATATTCCATGCTCGAGAAATTGTATCATTTGGTTTAAGTA
1 TCCATTCCTTCCAGCAA-TTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * * *
33075843 GTTTGTCATTTTGTAAACAAGTTTTAGTCTATGCATTAAAAACTTATATAAGTGAGAATTATTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * * * * *
33075908 TCGCTCGATTCTTGGATGAACTTCCGAACTTGTCAAACTTTT-CAAAGTTCTTTCATAACTTTGG
130 TCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTAC-AAGTTCTTTTATAACTTCGG
* * *
33075972 TTCCTTAAAACATTCAAGACGATCCATTCCTCCTTCAGCAATTTTTCGAATATTCCATGCTCGAG
194 TTCCTTAAAACATTCAAGACGATCCATTCCT--TCCAGCAATTTTCCGAACATTCCATGCTCG-G
33076037 AAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTTGTAAACAAGTTTTGGTTTGTGAATTAA
256 AAATTGCATCATTTGGTCTAAGTAGTTTGT-CA-TTTTGTAAACAAGTTTTGGTTTGTGAATTAA
* * * * * * *
33076101 AATCCTATTTACGTGATAGTT-TTTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACT
319 AAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACT
* * * * **
33076165 TTTACGGGTTCTTTTGTAAATTCGATTCCTTATAGTATTCAAGACGATCCA-TCCTTCCAAC-AT
384 TTTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAAT
* * * * * * *
33076228 GTTCCAAACATT-CATCCTC-GGAAATCGCATCATTTGATCCAAATAGTTTGTCATTCTGTAAAG
449 TTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC
* * ** *
33076291 AAGTTTTGTTCTTTGAATCAAAACTTATATACGTGAAAATTGTTTCTTTCTTGGTTCTTGGACGA
514 AAGTTTTGTTCTTTGAATAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACGA
*
33076356 ACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGGC
579 ACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGAC
33076421 GA
644 GA
* * * *
33076423 T-CATTCCTTCCAGCAAATTTTCGAACACTCCATGCTCGACAAATGGCATCATTTGGTCTAACTA
1 TCCATTCCTTCCAGC-AATTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* *
33076487 GTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAACTTATATAGGTGAGAATTGTTT
65 GTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
* * * *
33076552 CTCGCTGGCTGATTATTGAACGAACTTCTGAACTTGTCAAACTTTGT-CAAGTTCTTTTATAAGT
129 CTCTCT---TGATTCTTGGACGAACTTCTGAACTTGTCAAACTTT-TACAAGTTCTTTTATAACT
* * * * *
33076616 TAGGTTCCCTTAAAACATTCAAGGCAATCCATTCCTTCCAGCAATTTTCCAAAAATTCCATGCTC
190 TCGGTT-CCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC
*
33076681 GGAAATTGCATCATTTGGCCTAAGTAGTTT-TCCATTTTGTAAAACAAGTTTTGGTTTGTGAATT
254 GGAAATTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGT-AAACAAGTTTTGGTTTGTGAATT
* * * * * *
33076745 AAAATCTTATTTACGTGATAA-T-TTTATCCCTTGATTCTAGGACGAGCTTACGAACTTGTCAAA
317 AAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAA
* * * ** * * *
33076808 ATTTTACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGATGATCCATTTCTTCGAACA
382 CTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACA
* * * *
33076873 ATGTTCCAAACATTCCATCCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGCAA
447 ATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAA
* * *
33076938 ACAAG-TTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGATTCTTGGA
512 ACAAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGA
* * * *
33077002 CGAACTTCCGAAATTGTCAAACTTTTACAAGTTCTTTTATAACTTCAGTTCCATAAAACATTCAA
576 CGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAA
33077067 GACGA
641 GACGA
* * * *
33077072 TCCATTCCTTCAAGCAATTTTCCAAACATTCCATGCTGGACAAA-TGCATCATTTGGTCTAAATA
1 TCCATTCCTTCCAGCAATTTT-CGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
*
33077136 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAAACTTATATAGGTGAGAATTG--T
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATT-AAAAACTTATATACGTGAGAATTGTTT
* * **
33077199 CTCGCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTAAG
129 CTCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGG
* * * * *
33077264 TTCCCTAAAACATTCAAGACGATCCATTCCTTCCAGTAATTTTTCAAAAATTCCATGCTCGGGAA
194 TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-GGAA
*
33077329 ATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAT
258 ATTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAA
* * * * * **
33077393 CCTATTTACGAGAGAATT-TTTATCCCTTGATTCTAGGTTGAACTTACGAACTTGTCAAACTTTT
322 CTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTT
** ** *
33077457 ACGCA-TTCTTTTATAACTTCGA-TCCTTCCAGTATTGAAGACGATCCATTCCTTCCAACAA-TT
387 ACG-AGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATTT
* ** *
33077519 TCCAAACATTCCATCCTCTTGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGCAAAC-A
451 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* * * * * * *
33077583 GTTTTGTTCTTTGAATTAAAAACTTATATACCTGGGAATTCTTTCTCTCTGGGTTCTTGGACTAA
516 GTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACGAA
* * *
33077648 C-TTCTGAACTTGTAAAACTTTTAAGAGTTC-TTTATAACTTCAGTTCCTTAAAACAATCAAGAC
580 CTTTC-GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGAC
33077711 GA
644 GA
* * * * * *
33077713 TCCATTTCTTTCTAGCAATTTTCCGAACATTCCATGCTTGACAAATCGCATCATTTGTTCTAAAT
1 TCCA-TTCCTTCCAGCAATTTT-CGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAAT
* * *
33077778 AGTTTGTTATTTTGTAAACAAGTTTTGGTCCTTGAATTAAAAACTTATATAGGTGAGAATTGTTT
64 AGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
* * ** * * * *
33077843 CTCACTCTG-TTCTTGGACGAGCTTCAAAACTTGTCAAACATTTACAGGTTATTTTATAACTACG
129 CTCTCT-TGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
* * * *
33077907 GTTCCTCCTTAAAACATTCAAGGCAATCCATTCCTTCCAGCAATTTTTCGAACATTCAATGCTCG
193 G-T--TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-
33077972 GGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGTGAATTA
254 GGAAATTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTA
** * * * * *** * * ** *** * *
33078036 AAGTCCTATTTACGTGATAAATTTTTATCTAAGTAG-TTTTTCCA-TTCCTTCCAGCAA-TGTTT
318 AAAACTTATATACGTGA-GAATTGTT-TCTCCCTTGATTCTTGGACGAACTTAC-G-AACT-TGT
* * * * ** * * * **** * **
33078098 C-GAC-ATT-CCA-TGC-TCGAAAAATT-GCA-TCATTTGGTCCA--AATAGTTTG-TCC-TT--
378 CAAACTTTTACGAGTTCTTTTATAACTTCG-ATTC-CTTAAAACATTCA-AG-ACGATCCATTCC
** * * ** * * *
33078150 TTGTAAACAAGTTTGTGTCTTTAAATTAAAACTTATATAGGT-GAGAATTATTTC-TC-TCTTGG
439 TT-CCAACAA--TT-T-TC----CA--AACA-TTCCAT-GCTCGGGAA--ATTGCATCAT-TTGG
*** * * * * *
33078212 TTCTTGGATGAACTTCCGAACATGTCAAACTTT-T--ACAAGTTCTTTTATAACTTCGATTCCTT
488 -TC-T--A--AA--T---AGTTTGTC--ATTTTGTAAACAAGTT-TTGT-T--CTTTGA---ATA
* ** ** ** * *
33078274 AAAACATTCA-AGAC--GATCATTCCTTC-CAGCAATT--TTC-T-GAATATTCCATGCTCGGGA
533 AAAAC-TT-ATATACGTGAGAATTGTTTCTC-GC--TTGATTCTTGGACGA--AC-T-TTC--GA
* * * * * ** * **
33078331 AATTGT-ATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGT-CTT--TGCATT-
587 ACTTGTCA-AACTT--T-TACG-AG--T-TC-TTTTAT-AAC---TTCAGTTCCTTAAAACATTC
*
33078391 AA-A-AA
639 AAGACGA
** *** * * ** * * * * * *
33078396 TTTATATAGGT-GAG-AATTGTGTC--TCGCTCGATTCTTCGATGAACTTCCA-AACTT-GTC-A
1 TCCAT-TCCTTCCAGCAATT-T-TCGAACATTCCATGC-TCGA-GAAATTGCATCATTTGGTCTA
* * * ** * * *
33078454 AACT--TTT-ACAAGTTCTTTTATAAC----TTCGGTTCCTTAAAACATTCAAGAC-GATCCATT
61 AA-TAGTTTGTC-A-TT-TTGTA-AACAAGTTTTGG-T-CTT-TGA-ATTAAAAACTTAT--A-T
* * * **** * * * *
33078511 CCTTCAAGCAATT-TTTCGAAAATTCCATGCTCGG--GAAATTC--AATCATTTGGTCTAAGTAG
114 ACGT-GAG-AATTGTTTC-TCTCTT-GATTCTTGGACGAACTTCTGAA-C--TT-GTC-AA--A-
* * ** *** * * *
33078571 TTTTTAC--GTT-TTGTA-AAC--AAGTT--TTGGTGA-ATT-AA-A--ATCCTATTTACGT-GA
167 CTTTTACAAGTTCTTTTATAACTTCGGTTCCTT-AAAACATTCAAGACGATCC-A-TTCCTTCCA
* * * * * * * * ** * *
33078622 G-AATTTT--TATCCCTT-GATTCTAGGACGAACTTACGA--ACTT-GTC-AAACA-TTTATGCG
229 GCAATTTTCCGA-ACATTCCATGCTCGGA--AA-TTGC-ATCATTTGGTCTAAGTAGTTTGT-CA
* ** * ** * * * * * * *
33078678 TTCTTTTATAACTTCG-ATTCCTTATAGT--ATTCAAGAC-GATCCATTCCTTCCA-ACAATGTT
288 TT-TTGTA-AAC-AAGTTTTGGTT-T-GTGAATTAAAAACTTAT--A-TACGT-GAGA-ATTGTT
* ** * * * * * *
33078738 CCAAACATTCATCCTTGG--GAA-AT-CGCATCATTTGATCCAAA-TAGTTTGTC-A-TT-TTGT
343 TC-TCCCTTGATTCTTGGACGAACTTACG-A--ACTTG-T-CAAACT--TTT-ACGAGTTCTT-T
* * * * * * * * * * *** ** * **
33078795 AAAGAAGTT--TTGTCTTTGAATCA---AAAACGTAT--ATACGTGAGAA-TTTTTTTC-TTC-T
398 -TATAACTTCGAT-TCCTTAAAACATTCAAGACG-ATCCATTCCTTCCAACAATTTTCCAAACAT
** * * * * * * * *
33078850 T-GGTTCTTGGACGAACTTCCGA--ACTT-GTC-AAACT--TTTATGAGTCCTT-TATAAC---T
460 TCCATGCTCGG--GAAATTGC-ATCATTTGGTCTAAA-TAGTTTGTCA-T-TTTGTA-AACAAGT
** * * * * * * * * ** *
33078904 TCAGTTCCTTATGACATTCAAGAC-GATCATTCCTTCTAGCAATT-TTTCGAACACTCCATGC-T
518 TTTGTT-CTT-TGA-A-TAAAAACTTAT-A-TACGT-GAG-AATTGTTTC--TCGCTTGATTCTT
* * ** * * * * ** *
33078966 CGAC-AAATGGC-ATCATTTGGTCTAAA-TAGTTTGTC-A-TT-TTGTAAAACAAGTTTTGGT-C
573 GGACGAACTTTCGA--ACTT-GTC-AAACT--TTT-ACGAGTTCTTTTATAAC---TTCAGTTCC
** * *
33079024 TT-TGA-ATTAAAAACG-
628 TTAAAACATTCAAGACGA
*** * ** * * * *
33079039 T--ATATAGGT-GAG-AATTATTCTCGCCCGATT-C-T--TGGACGAACTTTCGA--ACTT-GTC
1 TCCAT-TCCTTCCAGCAA-T-TT-TCGAAC-ATTCCATGCTCGA-GAAATTGC-ATCATTTGGTC
* * * ** * ** *
33079093 -AAACT--TTT-ACAAGTTCTTTTATAAC----TTAGGTTCCTTAAAACATTCAAGGC-GATCCA
59 TAAA-TAGTTTGTC-A-TT-TTGTA-AACAAGTTTTGG-T-CTT-TGA-ATTAAAAACTTAT--A
* * * * **** ** * * * * * * *
33079149 TTCCTTCCAGCA-T-TTTCAGAAAATCCATGCTCGG--GAAATTGCAT-CATTTGGCCTAAGTAG
113 -TACGT-GAGAATTGTTTC--TCTCTTGATTCTTGGACGAACTT-C-TGAACTT-GTC-AA--AC
* * * ** * * * *
33079209 TTTT-CCA-TT-TTGTA-AACAAGTTTTGGTTTGTGAATTAAAATCCTATTTACG-TGAT-AATT
168 TTTTACAAGTTCTTTTATAAC----TTCGG--T-T-CCTTAAAA--C-ATTCAAGACGATCCATT
** **** * * * * * ** * * *
33079268 TTTATCCCTTGATTCT-AGGACGAGCTTACGAACTTG-TC-AAAATTTTA-CA--CGTTCTTTA-
222 CCT-TCCAGCAATTTTCCGAAC-A--TT-C---CATGCTCGGAAATTGCATCATTTGGTC-TAAG
* * ** ** * ** **
33079326 TAATTTCGATTCATTATAGTATTCAAGATGATCCATTTCTTCGAACAATGTTCCAAACATTCCAT
278 TAGTTT-G--TCATT-TTGTAAACAAG-T--T---TTGGTTTG-TGAA--TTAAAAAC-TT--AT
* * ** *** * * ** **
33079391 CCT-CGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATT-TTGCAAAC-AAGTTTTGGTCTT
327 -ATACGTG--A--G-A--A-TT-GT-T-TCTCCCTTG--ATTCTTG--GACGAACTTACGAAC-T
* * * * *
33079453 TGAATTAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAACTTG
375 TG---TCAAACTT-T-TA--CGAG--TTCTTT-T--AT--A-ACTT---CG-A-TT-C---C-T-
* * * * * * ** *
33079518 TCAAACTTTTACAAGTTCTTTTAT-AACTTCAGTTCCATA-AACATT-CAAGACGA-TCCATTCC
414 TAAAAC-ATT-CAAG-AC---GATCCA-TTC-CTTCCA-ACAATTTTCCAA-AC-ATTCCA-TGC
* * * *
33079579 TTCAAGCAATTTTCCAAACATTCCATGCTGGACAAATGGCATCATTTGGTCTAAATAGTTTGTCA
467 -TC-GGGAA-ATT----GCA---------------------TCATTTGGTCTAAATAGTTTGTCA
* * * *
33079644 TTTTTTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTGTTTCTTGCTTGA
504 TTTTGTAAACAAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGA
* * * *
33079709 TTCTTGGACGAAC-TTCGAACTTGTCAAGCTTTTACAAGTTCTTTTATAAC-TGAGGTTCCCTAA
568 TTCTTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCA-GTTCCTTAA
*
33079772 AACATTCAAGGCGA
632 AACATTCAAGACGA
* * * ***
33079786 TCCATTCCTTCCAGCAATTTTCCAAACATTCAATGCTCG-GGAATTGCATCATTTGGTCTTTGTA
1 TCCATTCCTTCCAGCAATTTT-CGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * * *
33079850 GTTT-TCCATTTTGTAAACAAGTTTTGAT-TTGTGAATTAAACCATCCTATTTACGTGATAATT-
65 GTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAA--AACTTATATACGTGAGAATTG
* * * * * * ** *
33079912 TTTATCCCTAGATTCTAGGACGAGCTTAC-GAACTTGTTAAACTTTTACGCGTTCGTTTATAACT
126 TTTCTCTCTTGATTCTTGGACGAACTT-CTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACT
** * ** * * * * *
33079976 TCTATTCCTTATAGTA-TGAAGA-GATCCATTTCTTCCCA-CAATGTTCCAAACATTCCATCCTC
190 TCGGTTCCTTAAAACATTCAAGACGATCCATTCCTT-CCAGCAATTTTCCGAACATTCCATGCTC
* * * *
33080038 GGGAAATCGCATAATTTGGTCTAACTAGTTTTGTCATTTTGTAAACAAGTTTT-GTTCTTTGAAT
254 -GGAAATTGCATCATTTGGTCTAAGTAG-TTTGTCATTTTGTAAACAAGTTTTGGTT-TGTGAAT
* * *
33080102 TAAAAACTTATATACGTGAGAATTGTTTCTCTCTGGGTTCTTGGACGAACTT-CGAACTTGTCAA
316 TAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAA
* * ** * *
33080166 ACTTTTATGAGTTCTTTTACAACTTC-ATTTCCTTAAAATGTTCAAGATGATCCATTCCTTCCAG
381 ACTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAA
* * ** *
33080230 CAATTTTTC-GACATTCCATGCTCGACAAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGT
445 CAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGT
* * * * * *
33080294 AAACAACTTTTGGTCTTTGAATTAAAAACGTATATAGGTGAGAATTGTTTCTCTCTCTTGGTTTC
510 AAACAAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTG-TT-TCTCGCTT-GATTC
* * * * * *
33080359 TTGGATGAACTTCCGAACATGTCAGACTTTTACAAGTTCTTTTATAACTTCGGTTCCTT-AAACA
571 TTGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACA
33080423 TTCAAGACGA
636 TTCAAGACGA
* * ** *
33080433 TCCATTCCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGTGTCATTTGGTCTAAGTA
1 TCCATTCCTTCCAGCAATTTTC-GAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* **
33080498 GTTTGTCATTTTGT-AACTAGTTTTTTTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
65 GTTTGTCATTTTGTAAACAAG-TTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
* * * ** * *
33080562 CTCTCTGGGTTCTTGGACGAACTT-TCGAACGTGTCAAACTTTTATGAGTTCTTTTACAACTTCA
129 CTCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
* * *
33080626 TTTCCTTAAAATATTCAAGATGATCCATTCCTTCCAGCAAATTTT-CG-ACATTCCATGCTC-GA
193 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGC-AATTTTCCGAACATTCCATGCTCGGA
* * *
33080688 CAATTGCATCATTTGGTCCAAATAGTTTGTCATTTTGT-AACAACTTTTGGTCTT-TGAATTAAA
257 -AATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAA
* * * * * * *
33080751 AACGTATATAGGTGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTT
320 AACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTT
* * *
33080816 TTACAAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATT
385 TTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATT
** * * *
33080881 TTCTGAATATTCCATGCTCGGGAAATTGTATCATTTGGTCTAATTAGTTTGTCATTTTGTAAACA
450 TTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACA
* * * * * *
33080946 AGTTTTGGTCTTTGCATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGGTTCTTGGATGA
515 AGTTTTGTTCTTTG-AATAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACGA
* * * * *
33081011 ACTTCCAAACTTGTCAAACTCTTACAAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGAC
579 ACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGAC
33081076 GA
644 GA
* * * *
33081078 TCCATTTCTTCCAGCAATTTTCTGAATATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTA
1 TCCATTCCTTCCAGCAATTTTC-GAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * *
33081143 GTTT-TCCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACGTGAGAATTTTT
65 GTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACGTGAGAATTGTT
* * * * **
33081206 TATCCCTTGATTCTAGGACGAACTTAC-GAACTTGTCAAACATTTACGCGTTCTTTTATAACTTC
128 TCTCTCTTGATTCTTGGACGAACTT-CTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTC
* * * * * * * *
33081270 GATTCCTTATAATATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATT-CATCCTGGGA
192 GGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGA
** * * * * *
33081334 AATCACATCATTTGATCCAA-TAGTTTGTCATTTTGTAAAGAAGTTTT-GTTCTTTGAATCAAAA
257 AATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAA
* ** * *
33081397 ACGTATATACGTGAGAATTGTTTTTCTTTCTTGGTTCTTGGACGAACTTTCGAACTTGTCAAACT
321 ACTTATATACGTGAGAATTG--TTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACT
* * *
33081462 TTTACGAGTTCTTTCATAACTTC-AGTTCCTTAAAACATTCAAGACGAT-CATTCCTTCTAGCAA
384 TTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAA
*** * ** *
33081525 TTTTTTGAACACTCCATGCTCGACAAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAA
448 TTTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAA
* * * * *
33081590 CAAGTTTTGGTCTTTCAATTAAAAAATTATATAGGTGAGAATTGTTTCTCGCTGGATTCTTGGAC
513 CAAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGAC
* *
33081655 GAAC-TTCTGAACTTGTCAAACTTTGT-CAAGTTCTTTTATAACTT-AGGTTTCTTAAAACATTC
577 GAACTTTC-GAACTTGTCAAACTTT-TACGAGTTCTTTTATAACTTCA-GTTCCTTAAAACATTC
*
33081717 AAGTC-A
639 AAGACGA
* * * *
33081723 TCCATTCCTTCCAGTAATTTTCCAAAAATTCCATGCTCG-GTAAATTGCATCATTTGGTCTAAGT
1 TCCATTCCTTCCAGCAATTTT-CGAACATTCCATGCTCGAG-AAATTGCATCATTTGGTCTAAAT
* * * * *
33081787 AGTTT-TCCATTCTGTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACGTGATAATT-T
64 AGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACGTGAGAATTGT
* * * * * * ** *
33081849 TTATCCCTTGATTCTAGGACGAGCTTATGAACTTGTCAAAATTTTACGCGTTCCTTTATAACTTC
127 TTCTCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTC
* * ** * * * * * * *
33081914 GATTCCTTATAGTATTCAAGACGATCCATTTCTTCGAACTATGTTCCAAACATTCCATCCTCGGG
192 GGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-GG
* * * * *
33081979 AAATCGTAACATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT-GTTCTTTGAATT-AA
256 AAATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAA
* * * *
33082042 AACTTATATACGTGAGAATCGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTT
320 AACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTT
* * * * *
33082107 TTACAAGTTCTTTTATAAATTCGGTTCCTTAAAACATTCAAGAGGATCCATTCCTTCCAGCAATT
385 TTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATT
** * * * * *
33082172 TTCTGAATATTCTATGCTCGGGAAATTGTATCATTTGGACTAAGTAGTTTGTCATTTTGTAAACA
450 TTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACA
* * * * * * *
33082237 AGTTTTGGTCTATGCATTAAAAACTTATATAAGTGAGAATTGTTTCTCGCTCGGTTCTTGGATGA
515 AGTTTTGTTCTTTG-AATAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACGA
* * * * * **
33082302 ACTTCCGAACTTGCCAAACCTTTACAAGTTCTTTCATAACTTTGGTTCCTTAAAACATTCAAGAC
579 ACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGAC
33082367 GA
644 GA
* * * *
33082369 TCCATTCCTTCCAGCAATTTTTCGAATATTCCATGCTCGAGAAATTGGATCATTTGGTTTAAGTA
1 TCCATTCCTTCCAGCAA-TTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * * * *
33082434 GTTT-TCCATTTTCTAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACGTGATAGTT-TT
65 GTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACGTGAGAATTGTT
* * * * ***
33082496 TATCCCTTGATTCTAGGATGAACTTAC-GAACTTGTCAAACTTTTACGCTTTCTTTTATAACTTC
128 TCTCTCTTGATTCTTGGACGAACTT-CTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTC
* * ** * * * *
33082560 GATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGTTCCAAACATT-CATCCTCGGG
192 GGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-GG
* * * * * * *
33082624 AAATCGCATCATTTGATCCAAATAGTTTGTCATTTTGTAAAGAAGTTTT-GTTCTTTGAATCAAA
256 AAATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAA
* ** * *
33082688 AACTTATATGCGTGAGAATTGTTTCTTTCTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTT
320 AACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTT
* * * * *
33082753 TTACGAGATCTTTTATAACTTC-AGTTCCTCAAAACATTCGAGACGAT-CATTCCTTCTAGCAAT
385 TTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAAT
* ** * * ** * * *
33082816 TTTTCGGACACTCCATGCTTGACAAATGGCATCATTTGATCTAAATAGTTTGTCATTTTGAAAAA
449 TTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTG-TAAA
* * * *
33082881 CAAGTTTTGGTCTTTGAATTAAGAACTTATATAGGTGAGAATTGTTTCTCGCTCGATTCTTGGAC
513 CAAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGAC
*
33082946 GAACTTTCGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTT-AGGTTCCTTAAAACATTCAA
577 GAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCA-GTTCCTTAAAACATTCAA
*
33083010 GGCGA
641 GACGA
* * *
33083015 TCCATTCCTTCCACCAATTTTCTGAAAATTCCATGCTCGGGAAATTGCATCATTTGGT-TAAAGT
1 TCCATTCCTTCCAGCAATTTTC-GAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAA-T
* * * * *
33083079 AGTTT-TCCATTTTGCAAACAAGTTTTGGT-TTGTGAATTAAAATCCTATTTACGTGATAATT-T
64 AGTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACGTGAGAATTGT
* * * * * *
33083141 TTAT-TCCTTCATTCTAGGACGAGCTTAC-GAACTTGTCAAAATTTTACACGTTCTTTTATAACT
127 TTCTCT-CTTGATTCTTGGACGAACTT-CTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACT
* * ** * * * * * * * *
33083204 TCGATTCCTTATAGTATTGAAGATGATCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTCG
190 TCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-
* * *
33083269 GGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTGCAAACAAGTTTTGGTCTT-TGAATTA
254 GGAAATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTGTGAATTA
* * * *
33083333 AAAACTTATATAGGTGAGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAACTTGTCAAAC
318 AAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAAC
* * *
33083398 TTTTACAAGTTCTTTTATAACTTC-AGTTCCATAAAACATTCAAGACGATCAATTCCTT-CAAGC
383 TTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAA-C
* *
33083461 AATTTTCCAAACATTCCATGC-CGGACAAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGT
446 AATTTTCCAAACATTCCATGCTCGG-GAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGT
* * * * *
33083525 AAACAAGTTTTGGTGTTTGAATTAAAACTTATATAGGTGAGAATTG-TTATCGCTTGATTCTTGG
510 AAACAAGTTTTGTTCTTTGAATAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGG
* * * * * * **
33083589 ACGAACTTCCGAACCTGTCAAACTTTTATGAGTTCTTTTACAACTTCATTTCTTTAAAATGTTCA
575 ACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCA
*
33083654 AGATGA
640 AGACGA
*
33083660 TCCATTCCTTCCAGCAATTTTTCG-ACATTCCATGCTCGACAAATTGCATCATTTGGTCCT-AAT
1 TCCATTCCTTCCAGCAA-TTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGT-CTAAAT
* * *
33083723 AGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACGTATATAGGTGAGAATTGTTT
64 AGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
* * * *
33083788 CTCTCTTGGTTCTTGGATGAACTTCCGAACATGTCAAACTTTTACAAGTTCTTTTATAACTTCGG
129 CTCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGG
* ** *
33083853 TTCCTTAAAACATTCAAGATGATCCATTCCTTCCAGCAATTTTTTGAATATTCCATGCTCGGGAA
194 TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-GGAA
* *
33083918 ATTGTATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTCTT-TGCATTAAAAA
258 ATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAAA
* * * * * * * *
33083982 CTTATATAGGTGAGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCAAACTTGTCAAACTCTT
322 CTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTT
* * *
33084047 ACAAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCCTTCCAGCAATTT
387 ACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATT-CCTTCCAACAATTT
** * *
33084112 TCTGAATATTCCATGCTC-GGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACA
451 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACA
* * * * * * *
33084175 AGTTTTGGTT-TGTGAATTAAAATCCTATTTACGTGAGAATT-TTTATCCCTTGATTCTAGGACG
515 AGTTTT-GTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACG
* * * * **
33084238 AACTTACGAACTTGTCAAACATTTACGCGTTCTTTTATAACTTC-GATTCCTTATAGTATTC-AG
578 AACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAG-TTCCTTAAAACATTCAAG
*
33084301 ATGA
642 ACGA
* * * * * *
33084305 TCCATCCTTCCTTCCA-CAATGTTCCAAAATT-CATCTCTCGGGAAATT-CATTTGAATATTTTG
1 TCCA---TTCCTTCCAGCAATTTTCGAACATTCCAT-GCTCGAGAAATTGCA--T---CA-TTTG
* *** * *
33084367 AT-TCAAAT-GTTT-TCAATTTATGT-TTTAAG--TT--TCTTT-TATTCAAAAACGTATA-ACG
56 GTCT-AAATAGTTTGTC-ATTT-TGTAAACAAGTTTTGGTCTTTGAATT-AAAAACTTATATACG
* * * *
33084422 TGAGAATTATTTCTTTCTTGGTT-TGTGACGAACGAGACTT-TCGAACTTGTC--ACTTTTACGA
117 TGAGAATTGTTTCTCTCTTGATTCT-TG--G-ACGA-ACTTCT-GAACTTGTCAAACTTTTACAA
* * * *
33084483 GTTCTTTCATAACTTCAGTTCCTTAAAACATTCAAGACGAT-CATTCCTTCTAGCAATTTTTCGA
176 GTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGA
* * * *
33084547 ACACTCCATGCTCGACAAATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTT
241 ACATTCCATGCTCG-GAAATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGT-AAACAAGTTT
* * * * *
33084612 TGGTCTT-TCAATTAAAAAATTATATAGGTGAGAATTGTTTCTCGCTGGATTCTTGGACGAACTT
304 TGGT-TTGTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTT
* * * * * *
33084676 -CTGAACTTGTCAAACTTTTTCAAGTTCTTTTATAACTTAGGTTCCTTAAAACATTCAAGGCAAT
368 AC-GAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGAT
* * *
33084740 CCATTCCTTCCAGCAATTTTCCAAAAATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAG
432 CCATTCCTTCCAACAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAG
* * * * * * *
33084805 TTT-TCCATTTTGTAAACAAGTTTTGGTCTGTGAATTAAAATCCTATTTACGTGATAATT-TTTA
497 TTTGT-CATTTTGTAAACAAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTC
* * * * * *
33084868 TCCCTTGATTCTAGGACGAGCTTAT-GAACTTGTCAAAATTTTACGCGTTCCTTTATAACTTC-G
560 TCGCTTGATTCTTGGACGAACTT-TCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAG
* **
33084931 ATTCCTTATAGTATTCAAGACGA
624 -TTCCTTAAAACATTCAAGACGA
* * * * * * * * * *
33084954 TACATTTCTTCGAACAATGTTCCAACATTCCATCCTCGGGAAATCGCAACATTTGGTCTAAATAG
1 TCCATTCCTTCCAGCAATTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATAG
* *
33085019 TTTGTCATTTTGTAAACAAGTTTTGTTCTTTGAATT-AAAACTTATATACGTGAGAATCGTTTCT
66 TTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCT
* * * *
33085083 CTCTTGGTTCTTGGACGAACTT-TCGAACTTGTCAAACTTTTACGAGTTCTTTCATAACTTCAGT
131 CTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* * * * *
33085147 TCCTTAAAAGATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTCCTTGCTCGACAAA
195 TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GAAA
* * *
33085211 TGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTT-TCAATTAAAAA
259 TTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGT-AAACAAGTTTTGGT-TTGTGAATTAAAAA
* * * * * *
33085275 ATTACATAGGTTAGAATTGTTTCTCGCTGGATTCTTGGACGAACTT-CTGAACTTGTCAAACTTT
322 CTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTAC-GAACTTGTCAAACTTT
* * * * * *
33085339 TTCAAGTTCTTTTATAACTTAGGTTCCTTAAAACATTCAAGGCAATCCATTCCTTCCAACAATTT
386 TACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATTT
* * *
33085404 TCCAAAAATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTAGTAAACA
451 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACA
* * * * * * * *
33085468 AGTTTTGGTT-TGTGAATTAAAATCCTATTTAGGTGATAATT-TTTATC-CTTTGATTCTAGGAC
515 AGTTTT-GTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGC-TTGATTCTTGGAC
* * * * **
33085530 GAACTTACGAACTTGTCAAACTTTAACGCGTTCTTTTATAACTTC-GATTCCTTATAGTATTCAA
577 GAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAG-TTCCTTAAAACATTCAA
*
33085594 GATGA
641 GACGA
* * * * * * ** * * *
33085599 TCCATTCCTTCCAACAATGTTCCAA-ATATTCATCCTCGGGAAATCACATCAGTTGATCCAAATA
1 TCCATTCCTTCCAGCAATTTTCGAACAT-TCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * ** *
33085663 GTTTGTCATTTTGTAAAGAAGTTTTTGTTCTTTGAATCGAAAACCT-TATACGTGAGAATTGTTT
65 GTTTGTCATTTTGTAAACAAG-TTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
* * ** * *
33085727 CTTTCTTGGTTCTTGGACGAACTT-TCGAACTTGTCAAACTTTTATGAGTTCTTTCATAACTTCA
129 CTCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
* * * * *
33085791 GTTCCTTAAAAGATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTCCTTGCTCGTCA
193 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GA
* * *
33085855 AATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAACAAGTTTTGGTCTT-TCAATTAAA
257 AATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGT-AAACAAGTTTTGGT-TTGTGAATTAAA
* * * * * *
33085919 AAATTACATAGGTTAGAATTGTTTCTCGCTGGATTCTTGGACGAACTT-CTGAACTTGTCAAACT
320 AACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTAC-GAACTTGTCAAACT
* * * * * *
33085983 TTTTCAAGTTCTTTTATAACTTAGGTTCCTTAAAACATTCAAGGCAATCCATTCCTTCCAACAAT
384 TTTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAAT
* *
33086048 TTTCCAAAAATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAA
449 TTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAA
* * * * * * * * *
33086112 CAAGTTTTGGTT-TGTGAATTAAAATCCTATTTAGGTGATAATT-TTTATC-CTTTGATCCTAGG
513 CAAGTTTT-GTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGC-TTGATTCTTGG
* * * * * **
33086174 ACGAGCTTACGAACTTGTCAAACTTTTACGCGTTCTTTTATAACTTCAATTCCTTATAGTATTCA
575 ACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCA
33086239 AGACGA
640 AGACGA
* * * * * * * * *
33086245 TCCATTTCTTCGAACAATGTTCCAAACATTCCATCCTTGGGAAATCGCATCATTTGGTCTAAATA
1 TCCATTCCTTCCAGCAAT-TTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * *
33086310 GTTTCTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGCGAGAATTGTTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * *
33086375 TCTCTTGGTTCTTGGACGAGCTT-TCGAACTTGTCAAACTTTTACAAGTTCATTTTATAACTTCA
130 TCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTC-TTTTATAACTTCG
* * *
33086439 GTTCCATAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCC-AACATTCCATGCTTGACA
193 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GA
*
33086503 AATGGCATCATTTGGTCTCAA-TAGTTTGTCATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAA
257 AATTGCATCATTTGGTCT-AAGTAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAA
* * * *
33086566 AACTTATATAGGTGAGAATTGTTTCTCGCTCGATTCTTGGACGAACTTCCGAACTTGTCAAACTT
320 AACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTT
* * * * * *
33086631 TTACAAGTTCTTTGATAACTTAGGTTCCTTAAAACTTTCAAGGCGATCCATTCCTT-CAAGCAAT
385 TTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAA-CAAT
* * * *
33086695 TTTTCAAACATTCAATGCTTGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAA
449 TTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAA
** * * * * * * *
33086759 CAAGTTTTGGTT-AGTGAATTAAAATCCTATTTACGTGATAATT-TTTATC-CTAGATTCTAGGA
513 CAAGTTTT-GTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGA
* * * * * * * ** *
33086821 TGAGCTTACGAACTTGTCAAACTTTTACGCGTT-TGTTTATCACTTCTA-TTTCTTATAGTATTG
576 CGAACTTTCGAACTTGTCAAACTTTTACGAGTTCT-TTTATAACTTC-AGTTCCTTAAAACATTC
33086884 AAGACGA
639 AAGACGA
* * * * * * * * * *
33086891 TCCATTTCTTCAAACAATGTTCCAAACATTCCATCCTCGGGAAATCGCATAATTTGGTCTAACTA
1 TCCATTCCTTCCAGCAAT-TTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* *
33086956 GTTTGTCATTTTGTAAACAAGTTTTGCTCTTTGAATTAAAAACTTATATACGTGAGAAAAT-TTT
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAG-AATTGTTT
* * * **
33087020 CTCTCTGGGTTCTTGGACGAACTT-TCAAACTTGTCAAACTTTTAGGAGTTCTTTTATAACTTCG
129 CTCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
* * * *
33087084 GTTCCTTAAAACGTTCAAGACGTTCCATTCCTTCCAACAATTTTCTGAACATTCCATGCTCGAGA
193 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GA
33087149 AATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAA
257 AATTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAA
* * * * * * *
33087213 TCCTATTTACGTGAGAA-T-TTTATCCCTTGATTCTAGGACGAACTTATGAACTTATCAAACTTT
321 ACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTT
* ***
33087276 TACGCA-TTCTTTTATAACTTCGATTCCTTATAGTGTTCAAGACGATCCATTCCTTCCAAC-ATT
386 TACG-AGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATT
* * * * *
33087339 GTTCCAAACATTCCATCCTCGGGAAATTGTATCATTTGATCCAAATAGTTTGTCATTTTGTAAAG
450 -TTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC
* * * * **
33087404 AAGTTTTGTTCTTTGAATCAAAAACTTATATGCGTGAGAATTATTTCTCTCTTGGTTCTTGGAAT
514 AAGTTTTGTTCTTTGAAT-AAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACG
*
33087469 AACTTCCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGA
578 AACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGA
33087534 CGA
643 CGA
* * *
33087537 T-CATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGACAAATGGCATCATTTGGTCTACATA
1 TCCATTCCTTCCAGCAATTTT-CGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * *
33087601 GTTTGTCATTTTGTAAAACAAGTTTTGGTCTTTCAATTAAAAACTTAAATAGGTGAGAATTGTTT
65 GTTTGTCATTTTGT-AAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
* * * * * *
33087666 C-CCCTCGGTTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACGAGTTCTTTCATAACTTCAG
129 CTCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGG
* * * * * *
33087730 TTCCTTAAAAGATTCAAGACGAT-CATTCCTTCCAGCAATTTTTCGAACACTCCTTGCTTGACAA
194 TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GAA
* * *
33087794 ATGGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAATACAAGTTTTGGTCTT-TCAATTAAAA
258 ATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAA-ACAAGTTTTGGT-TTGTGAATTAAAA
* * * * * *
33087858 AATTACATAGGTTAGAATTGTTTCTCGCTGGATTCTTGGACGAACTT-CTGAACTTGTCAAACTT
321 ACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTAC-GAACTTGTCAAACTT
* * * * * *
33087922 TTTCAAGTTCTTTTATAACTTAGGTTCCTTAAAACATTCAAGGCAATCCATTCCTTCCAACAATT
385 TTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATT
*
33087987 TTCCAAA-ATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAAC
450 TTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAAC
* * * * * * * * *
33088050 AAGTTTTGGTCTGTGAATTAAAATCCTATTTAGGTGATAATT-TTTATC-CTTTGATTCTAGGAC
514 AAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGC-TTGATTCTTGGAC
* * * * * * **
33088113 GAGCTTACGAACTTGGCAAACTTTTACGCGTTCTTTTATAACTTCAATTCCTTATAGTATTCAAG
577 GAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAG
33088178 ACGA
642 ACGA
* * * * * * * *
33088182 TCTATTTCTTCGAACAATGTTCCAAACATTCCATCCTCGGGAAATTGCATCATTTGGTCTAAATA
1 TCCATTCCTTCCAGCAAT-TTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * *
33088247 GTTTCTCATTTTGTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATACGCGAGAATTGTTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * *
33088312 TCTCTTGGTTCTTGGACGAGCTT-TCGAACTTGTCAAACTTTTACAAGTTCATTTTATAACTTCA
130 TCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTC-TTTTATAACTTCG
* * * *
33088376 GTTCCATAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCAAACATTTCATGCTCGACA
193 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GA
* *
33088441 AATGGCATCATTTGGTCTCAA-TAGTTTCTCATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAA
257 AATTGCATCATTTGGTCT-AAGTAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAA
* * *
33088504 AACTTATATAGGTGAGAATTGTTTCTCGCTTGATTCTTGGACGAACTTCCGAACTTGTCAAACTT
320 AACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTT
* * * * *
33088569 TTACAAGTTCTTTTATAACTTAGGTTCCTTAAAACTTTCAAGGCGATCCATTCCTT-CAAGCAAT
385 TTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAA-CAAT
* * *
33088633 TTTTCAAACATTCAATGCTCGGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTT-TAAA
449 TTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAA
** * * * * * * * * *
33088696 CAAGTTTTGGTT-AGTGAATTAAAATCCTATTTACGTGATAATTTTTTATCCCTAGATTCTAGGA
513 CAAGTTTT-GTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGA
* * * * * * * * ** *
33088760 TGAGCTTACGAACTTGTCAAACTTTTACGTGTTTGTTTTATCACTTCTA-TTTCTTATAGTATTG
576 CGAACTTTCGAACTTGTCAAACTTTTACGAG-TTCTTTTATAACTTC-AGTTCCTTAAAACATTC
33088824 AAGACGA
639 AAGACGA
* * * * * * * ** * *
33088831 TCCATTTCGT-CAACAATGTTCCAAACATTCTATCCTCG-GAAATCACATAATTTGGTCTAACTA
1 TCCATTCCTTCCAGCAAT-TTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* *
33088894 GTTTGTCATTTTGTAAACAAGTTTTGCTCTTTGAATTAAAAACTTATATACGTGAGAAAAT-TTT
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAG-AATTGTTT
* * * **
33088958 CTCTCTGGGTTCTTGGACGAACTT-TCAAACTTGTCAAACTTTTAGGAGTTCTTTTATAACTTCG
129 CTCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
* * *
33089022 GTTCCTTAAAACGTTCAAGACGTTCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGAGA
193 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GA
33089087 AATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAA
257 AATTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAA
* * * * * *
33089151 TCCTATTTACGTGAGAATT-TCTATCCCTTGATTCTAGGACGAACTTACGAACTTGTCAAACTTT
321 ACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTT
* * ** *
33089215 TACGCGTTCTTTTATAACTTCGATTCCTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGT
386 TACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATTT
* *
33089280 TCCAAACATTCCATCCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTCTCATTTTGTAAACAA
451 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* * *
33089345 GTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCTCTCTCTGGTTCTTGGAAGA
516 GTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCT-TGATTCTTGGACGA
* * * * * *
33089410 ACGTCCGAACTTGTCAAACTTTTAAGAGTTCTTTTATAACTTCAGTTCGTTAAAATAATCAAGAC
579 ACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGAC
33089475 GA
644 GA
* * * *
33089477 TCCATTCCTTCTAGCAATTTTCTGAACATTCCATGCTCGACAAATCGCATCATTTGTTCTAAATA
1 TCCATTCCTTCCAGCAATTTTC-GAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * * * * *
33089542 GTTTGTTACTTTGTACACAAGTTTTGGTCCTTGAATTAAAACCTTATATAGGTGAGAATTATTT-
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * * *
33089606 TGCACTCGATTCTTGGACGAACTTCTGAACTAGTCAAACATTTACAAGTTCTTTTATAACTTCGG
130 T-CTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGG
* * * * *
33089671 TTCCTTAAAACGTTCAAGACAATCCATTCCTTCCAGGAATTTTCTGAATATTCCATGCTCGGGAA
194 TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-GGAA
* * * * * *
33089736 ATTGTATTATTTGGTTTAAGTTGTTTGTCATTTTGTAAACAAGTTTTGGTCTT-TGCATTAAACA
258 ATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGT-TTGTGAATTAAAAA
* * * * * *
33089800 CTTATATAGGTGAGAATTGTTTCTCGCTCGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTT
322 CTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTT
** * ** * *
33089865 ACTTGTTCTTTTATAGCTTTAATTCCTTAAAACATTCAGGACGATCCATTCCTTCCAGCAATTTT
387 ACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAA-TTT
** * *
33089930 TTGAAA-ATTCCATGCTCCGGAAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACA
451 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGT-CATTTTGTAAACA
* * * * * * * * * * *
33089993 AGTTTTGGTT-TGTGAATTAAAATCCTATTTATGTGATAATT-TTTATCCCTAGATTCTAGGATG
515 AGTTTT-GTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACG
* * * * * ** *
33090056 AGCTTACGAACTTGTCAAACTTTTACGCGTTCATTTATAACTTCTA-TTCCTTATAGTATTGAAG
578 AACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTC-AGTTCCTTAAAACATTCAAG
33090120 ACGA
642 ACGA
* * * * * * * * *
33090124 TCCATTTCTTCCAACAATGTTCCAAACATTCCATCCTC-AGGAAATCGCATAACTTGGTCTAACT
1 TCCATTCCTTCCAGCAAT-TTTCGAACATTCCATGCTCGA-GAAATTGCATCATTTGGTCTAAAT
* * * *
33090188 AGTTTGTCATTTCGTAAACAAGTTTTGTTCTTGGAATTAAAAACTTATATACGTGAGAA-AGTTT
64 AGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTG-TT
* * ** * * **
33090252 TCTCTCTGGGTTCTTGGATAAACTT-TCAAATTTGTCAAACTTTTAGGAGTTCTTTTATAACTTC
128 TCTCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTC
* * *
33090316 GGTTCCTTAAAACATTCAAGATGTTCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGAG
192 GGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-G
*
33090381 AAATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTCTAAACAAGTTTTGGTTTGTGAATTAAA
256 AAATTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAA
* * * * *
33090445 ATCCTATTTACGTGAGAATT-TTTATCCCTTGATTCTAGGA-GAACTTACGAACTTGTCAAACTT
320 AACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTT
* * * **** *
33090508 TTAAGCGTTCTTTTATAACTTCGATGCCTTATCGTATTCAAGACGATCCATTCCTTCCAAC-TTT
385 TTACGAGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATT
* ** * * * *
33090572 GTTCCAAACATTCCATCCTCGGGAAATCACATCATTTGATCCATATAGTTTGTCATTTTGTAAAG
450 -TTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC
* * * *
33090637 AAGTTTTGTTCTTTGAATGAAACACTTATATGCGTGAGAATTGTTTCTCTCTTGGTTCTTGGACG
514 AAGTTTTGTTCTTTGAAT-AAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACG
* *
33090702 AACTTCCGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGA
578 AACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGA
33090767 CGA
643 CGA
* *
33090770 T-CATTCCTTCCAGC-ATTTTCCGAACATTCCATGCTCGACAAATGGCATCATTTGGTCTAAATA
1 TCCATTCCTTCCAGCAATTTT-CGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* *
33090833 GTTTGTCATTTTGTAAACAAGTTTTGGTGTTTGAAGTAAAAACTTATATACGTGAGAATTGTTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * * * *
33090898 TCGCTCGATTCTTGGACGAAATTTTGAACTTTTTCACTTCTCAAACTTTTACAAGTTCTTTTATA
130 TCTCTTGATTCTTGGACGAACTTCTG-A-------ACTTGTCAAACTTTTACAAGTTCTTTTATA
* * * *
33090963 ACTTCAGTTTCATAAAACATTCAAGACGATCCATTCCTTTCAGCAATTTTCCGAACATTCCATGC
187 ACTTCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGC
33091028 TCGGGAAATTGCATCATTTGGTCTCAA-TAGTTT-TGCATTTTGTAAACAAGTTTTGGTTTGTGA
252 TC-GGAAATTGCATCATTTGGTCT-AAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGA
* * * * * * * ** * *
33091091 ATTAAAATCCTATTTACATGATAATT-TTTATCCCTAGATTCGAGGACGAGCTTACAAACTTGTC
314 ATTAAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTC
* * * ** *
33091155 AAACTTTTAC-ACGTTCGTTTATAACTTCTATTCCTTATAGTATTCAAGACGATCCATTTCTTCC
379 AAACTTTTACGA-GTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCC
* * * * * *
33091219 AACAATGTTCCAAACATTCCATCCTCAGGAAATTGCATAATTTGGTCTAACTGGTTTGTCATTTT
443 AACAATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTT
** * * * *
33091284 GTAAACAAGTTTTGTTCTTTGAATTAAAAACTTATATTGGTGAGAATTGTTTCTCTCTGGGTTAT
508 GTAAACAAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCT
* * ** *
33091349 TGGACGAACTTTCAAACTTGTCAAACTTTTCCGAGTTCTTTTATAACTTTGGTTCCTTAAAACGT
572 TGGACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACAT
*
33091414 TCAAGACGT
637 TCAAGACGA
*
33091423 TCCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAGTA
1 TCCATTCCTTCCAGCAATTTTC-GAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * * *
33091488 ATTT-TCCATTTTGTAAACAAGTTTTGGTTTTTGAATTAAAATCCTATTTACGTGAGAATT-TTT
65 GTTTGT-CATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
* * * ** * *
33091551 ATCCCTTGATTCTAGGAAAAACTTAC-GAACTTGTCAAACTTTTACACGTTCTTTTATAGCTTCG
129 CTCTCTTGATTCTTGGACGAACTT-CTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
* * *** * ** * *
33091615 ATTCCTTATAGTGTTCAAGACGATCCAATCCTTCCAAAAATGTT-CGAAACATTCCATCCTCGGA
193 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCG-AACATTCCATGCTCGGA
* * * * * * *
33091679 AATTACATCATTTGATCCAAATAGTTTGTCATTTTGTAAAGAAG-TTT-GTTCTTTGAATCAAAA
257 AATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TGTGAATTAAAA
* * *
33091742 ACTTATATACGTGAGAATTGTTTCTCTCTTTGGTTCTTGGACGAACTTCCGAACTTGTCAAACTT
321 ACTTATATACGTGAGAATTGTTTCTC-CCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTT
*
33091807 TTACGAGTTCTTTTATAACTTC-AGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAAT
385 TTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAAT
*** ** * *
33091871 TTTATGAACATTCCATGCTCGTCAAATCGCATCATTTGGTCTATATAGTTTGTCATTTTGTAAAC
449 TTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC
* * * *
33091936 AAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCGATTCTTGGA-T
514 AAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACG
** * *
33092000 AAAGTTCTGAACTTGTCAAACCTTTAC-ATGTTCTTTTATAACTTCTGTTCCTTAAAACATTCAA
578 AACTTTC-GAACTTGTCAAACTTTTACGA-GTTCTTTTATAACTTCAGTTCCTTAAAACATTCAA
*
33092064 GACAA
641 GACGA
* * * *
33092069 TCCATTCCTTCCAGCAATTTTCCGAACATTCCATACTCGGGAAATTGCATCGTTTGGTCTAAGTA
1 TCCATTCCTTCCAGCAATTTT-CGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * * * *
33092134 GTTT-TCCATTTTGTAAACAAGTTATGCT-TTGTGAATTAAAATCCTATTTACGTGATAATT-TT
65 GTTTGT-CATTTTGTAAACAAGTTTTGGTCTT-TGAATTAAAAACTTATATACGTGAGAATTGTT
* * * * * * *
33092196 TAT-TCCCTGATTCTAGGACGAGCTTAC--AAATTGTCAAACTTTTACGCA-TTTTTTTA-AACT
128 TCTCT-CTTGATTCTTGGACGAACTT-CTGAACTTGTCAAACTTTTAC-AAGTTCTTTTATAACT
** * ** * * * * * * *
33092256 TCTATTCCTTATAGTATTCAAGATGATCCATTTCTTCGAAC-ATTGTTGCAAACATTCCATCCTC
190 TCGGTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATT-TTCCGAACATTCCATGCTC
* * * * * * *
33092320 GGGAAATCGTATCATTTGGTCTAAATAGTTTGTCACTTTGTAAATAAGTTTT-GTTCTTTTAATT
254 -GGAAATTGCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTT-TGTGAATT
* * * *
33092384 AAAAACTTATATACGTGAGAATTGTTTCTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAA
317 AAAAACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAA
* * *
33092449 CTTTTACGAGTTGTTTTATAACTTC-AGTTCCTTAAAACATTCAAGATGAT-CATTCCTTCCAGC
382 CTTTTACGAGTTCTTTTATAACTTCGA-TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAAC
33092512 AA---T-------TT---T-C-C--G-AA---CATCATTTGGTCTAAATAGTTTGTCATTTTGTA
446 AATTTTCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTA
* * *
33092556 AACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTGTTTCTCGCTCTG-TTGTTG
511 AACAAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCT-TGATTCTTG
* * * * * *
33092620 GATGAACTTCCAAACCTGTCAAACTTTTACGAGTTATTTTATAACTTCAGTTCCTTAAACCATTC
574 GACGAACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTC
*
33092685 AAGACTA
639 AAGACGA
* * * * * *
33092692 TCCATTCCATCCAGTAATTTTTCGAACATTCCATTCTCGACAAATCGCATCATTTGGCCTAAATA
1 TCCATTCCTTCCAGCAA-TTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* *
33092757 GTTTGTCATTTCGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTGTTTG
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT-
* * ** *
33092822 C-CTCTTGGTTCTTGGATGAACTTCCAAATTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGG
129 CTCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGG
* * * *
33092886 TTCCTTAAAACATTCAAGACGATCCATTCCATCTAGCAATTTTCTGAATATTCCATGCTCGGGAA
194 TTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-GGAA
* *
33092951 ATTGTATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAT
258 ATTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAA
* * * * * * *
33093015 CCTATTTACATTAGAATT-TTTATCCCTTGATTCTCGGACGAACTTATGAACTTGTCAAACTTTT
322 CTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTT
* * * *
33093079 ACGTGTTCTTTTATAACTTCGATTCCTT-ATACAATTCAAGATGATCCATTCCTTCCAACAATGT
387 ACGAGTTCTTTTATAACTTCGATTCCTTAAAAC-ATTCAAGACGATCCATTCCTTCCAACAATTT
* * ** ** *
33093143 TCCAAACATTCCATCCTCGGGAAATCGCATCATTTTATCCCAATAGTTTGTCATTTTGTAAAGAA
451 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* * * *
33093208 GTTTTGTTCTTTGAATCAAAAAATTATATACGTAAGAATTGTTTCTCCCTTGGTTCTTGGACGAA
516 GTTTTGTTCTTTGAAT-AAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACGAA
* *
33093273 CTTCCGAACTCGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACG
580 CTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACG
33093338 A
645 A
* * ** *
33093339 T-CATTCCTTCCAGCAATTTTTCGAACATTCCATGCTCAACAAAAGGTATCATTTGGTCTAAATA
1 TCCATTCCTTCCAGCAA-TTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * *
33093403 GTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATATAGGTGAGAATTATTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
** * * * * * *
33093468 TCGATCGGTTCTTGGATGAACTTCCGAACTTCTCAAACTTTTACAAGTTC-TTT-TAACTTCGAT
130 TCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
** *
33093531 TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTTTGAAAATTCCATGCTCGGGAAA
195 TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTC-GGAAA
* * *
33093596 TTGCATCATTTGGTC-AAGTGGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGTGAATTACAATC
259 TTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAAC
* * * * * *
33093659 CTAGT-TAAGTTAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACAAACTTGTCAAACTTTT
323 TTA-TATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTT
* * * ** *
33093722 ACGCA-TTCTTTTTTAACTTCGATTCGTTATAGTATTCAAGACGATCCATTCCTTCCAACAATGT
387 ACG-AGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATTT
** *
33093786 TCCAAACATTCCAACCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTCGTAAACAA
451 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* * * *
33093851 GTTTTGTTCTTTGAGTTAAAAACTTATATACGTGAGAATTGTTTCTCACTAGATTCTTGGATGAA
516 GTTTTGTTCTTTGA-ATAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACGAA
* * * *
33093916 CTTTCAAACTTGTCAAACTTTTACAAGTTCTTGTATAACTTCAGTTCCTTAAAACATTCAAGATG
580 CTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACG
33093981 A
645 A
* * * * * *
33093982 TCCATTCCATCCAACAATTTTTTGAACATTCCATTCTCG-GCAAATCGCATCATTTGGTCTAAAG
1 TCCATTCCTTCCAGCAA-TTTTCGAACATTCCATGCTCGAG-AAATTGCATCATTTGGTCTAAAT
*
33094046 AGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTCTATACGTGAGAATTGTTT
64 AGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTT
* * * * **
33094111 CTCTCTGGGTTCTTGGACGAACTT-TCAAACTTGTCAAACTTTTACGAGGCCTTTTATAACTTCG
129 CTCTCTTGATTCTTGGACGAACTTCT-GAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCG
* *
33094175 GTTCCTTAAAACATTCAAGATGATCCATTCCTTCCATCAATTTTCCGAACATTCCATGCTCGAGA
193 GTTCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GA
* *
33094240 AATTGCATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAATTTTTTGTTTGTGAATTAAAA
257 AATTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAA
* * * * * * * *
33094304 TCCTATTTACGTGAGAATT-TTTATCCATTGATTCTAGGACGAACTTACGAACTTGTCTAACATT
321 ACTTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTT
* * ** * * *
33094368 TACGCA-TTCTTTTATAACTACGATTCCTTATAGTATTCAAGATGATCCATTCCTTCCAAGAATG
386 TACG-AGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATT
**
33094432 TTCCAAACATTCCAT-CGTCGGGAAATCACATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC
450 TTCCAAACATTCCATGC-TCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAAC
* * * * *
33094496 AAGTTTTGTTCTTTGAATTAAAAACTTATATACATGAGAATTGTTTCTCTCTGGGTTCTTGGACT
514 AAGTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACG
* * *
33094561 ACCTTTCGAAGTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAACATTCAAGA
578 AACTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGA
33094626 CGA
643 CGA
* * ** *
33094629 TCCATTCCTTCTAGCAATTTTTCGAACATTCCATGCTCGAGAAATCGCATCATTTCATCGAAATA
1 TCCATTCCTTCCAGCAA-TTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * * *
33094694 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTATAAACTTATTTACATGAGAATAGTTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * * ** * **
33094759 TCTC-TGTTTCTTGGACAAACTACCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTTAGT
130 TCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* * *
33094823 TCCTTAAAACATTCAAGACAATCCATTCCTTCCTGCAATTTTTCGAACATTCCATGCTCGAGAAA
195 TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCG-GAAA
* * * * *
33094888 TTGAATCATTTGGTGTAAGTAGTTT-TCCATTTTATAAACAAGTTTTGG-TTATGAATTAAAATC
259 TTGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAAC
* * * * * * *
33094951 CTATTTACGTGAGAATT-TTTATCCCTTGATTCTAGGACGAACTTACGAAGTTTTCAAAGTTTTA
323 TTATATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTTA
* * ** * *
33095015 CGCA-TTCTTTTATAAATTCGATTCCTTATAGTATTCAAGATGATCCATTCTTTCCAACAATGTT
388 CG-AGTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAAT-TT
* * * * * * *
33095079 T-CGAACATTCCATCCTCGAGAAATCGCATCGTTTGATCTAAATAGTTTGTCAATTTGTAAACAA
451 TCCAAACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAA
* * *
33095143 GTTTTGTTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCCCTCTTGGTTCTTGGACGAA
516 GTTTTGTTCTTTGAA-TAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACGAA
33095208 CTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACG
580 CTTTCGAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACG
33095273 A
645 A
* * * ** ** * *
33095274 TCCATTCCTTCAAGCAATTTTCCAAAGATTCCATGCTCGAGAAATCACATCATTTCATCGAAAGA
1 TCCATTCCTTCCAGCAATTTT-CGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATA
* * *
33095339 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTACAAACTTATTTACGTGAGAATAGTTTC
65 GTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTC
* * ** * *
33095404 TCTCTTGTTTCTTGGATGAACTTCCAAACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCGGA
130 TCTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGT
* *
33095469 TCCTTAAAATATTCAAGACGA-CCATTCCTTCCAGCAATTTTCTGAACATTCCATGCTCGGAAAT
195 TCCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGAAAT
* * *
33095533 TGTATCATTTGGTCTAAGTAGTTT-TCCATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAATCC
260 TGCATCATTTGGTCTAAGTAGTTTGT-CATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAACT
* * * * * *
33095597 TAT-TCACGTGAGAATT-TTTATCCCTTGATTCTAGGATGATCTTACGAACTTGTCTAACATTTA
324 TATAT-ACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTTA
* *
33095660 TGCGTTCTTTTATAACTTCGATTCC
388 CGAGTTCTTTTATAACTTCGATTCC
33095685 AAGGCACCAA
Statistics
Matches: 17349, Mismatches: 2370, Indels: 1661
0.81 0.11 0.08
Matches are distributed among these distances:
623 245 0.01
624 35 0.00
625 101 0.01
626 136 0.01
627 6 0.00
629 2 0.00
630 1 0.00
631 92 0.01
632 190 0.01
633 124 0.01
634 3 0.00
636 3 0.00
637 14 0.00
638 31 0.00
639 9 0.00
640 81 0.00
641 79 0.00
642 220 0.01
643 566 0.03
644 1473 0.08
645 3416 0.20
646 3845 0.22
647 2847 0.16
648 1198 0.07
649 746 0.04
650 144 0.01
651 50 0.00
652 313 0.02
653 299 0.02
654 46 0.00
655 116 0.01
656 7 0.00
657 10 0.00
658 9 0.00
659 7 0.00
660 3 0.00
661 7 0.00
662 4 0.00
663 1 0.00
664 4 0.00
665 4 0.00
666 14 0.00
667 12 0.00
668 6 0.00
669 13 0.00
670 8 0.00
671 14 0.00
672 27 0.00
673 31 0.00
674 38 0.00
675 31 0.00
676 31 0.00
677 15 0.00
678 13 0.00
679 25 0.00
680 28 0.00
681 34 0.00
682 23 0.00
683 26 0.00
684 19 0.00
685 18 0.00
686 18 0.00
687 10 0.00
688 6 0.00
689 6 0.00
690 8 0.00
691 2 0.00
692 3 0.00
693 1 0.00
694 1 0.00
695 2 0.00
697 1 0.00
698 5 0.00
700 4 0.00
701 1 0.00
702 4 0.00
703 1 0.00
704 7 0.00
706 1 0.00
707 7 0.00
708 4 0.00
709 6 0.00
710 3 0.00
711 3 0.00
712 3 0.00
713 3 0.00
714 2 0.00
715 3 0.00
716 1 0.00
717 3 0.00
718 5 0.00
719 3 0.00
720 2 0.00
721 2 0.00
722 5 0.00
723 4 0.00
724 5 0.00
725 7 0.00
727 5 0.00
728 3 0.00
731 3 0.00
732 2 0.00
733 1 0.00
734 14 0.00
735 8 0.00
736 2 0.00
737 17 0.00
738 13 0.00
741 4 0.00
742 2 0.00
743 4 0.00
744 6 0.00
745 12 0.00
746 19 0.00
747 17 0.00
748 27 0.00
749 28 0.00
750 30 0.00
751 30 0.00
752 14 0.00
753 15 0.00
754 8 0.00
ACGTcount: A:0.28, C:0.19, G:0.14, T:0.39
Consensus pattern (645 bp):
TCCATTCCTTCCAGCAATTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAATAG
TTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTATATACGTGAGAATTGTTTCT
CTCTTGATTCTTGGACGAACTTCTGAACTTGTCAAACTTTTACAAGTTCTTTTATAACTTCGGTT
CCTTAAAACATTCAAGACGATCCATTCCTTCCAGCAATTTTCCGAACATTCCATGCTCGGAAATT
GCATCATTTGGTCTAAGTAGTTTGTCATTTTGTAAACAAGTTTTGGTTTGTGAATTAAAAACTTA
TATACGTGAGAATTGTTTCTCCCTTGATTCTTGGACGAACTTACGAACTTGTCAAACTTTTACGA
GTTCTTTTATAACTTCGATTCCTTAAAACATTCAAGACGATCCATTCCTTCCAACAATTTTCCAA
ACATTCCATGCTCGGGAAATTGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTT
GTTCTTTGAATAAAAACTTATATACGTGAGAATTGTTTCTCGCTTGATTCTTGGACGAACTTTCG
AACTTGTCAAACTTTTACGAGTTCTTTTATAACTTCAGTTCCTTAAAACATTCAAGACGA
Found at i:33095811 original size:33 final size:33
Alignment explanation
Indices: 33095774--33095852 Score: 131
Period size: 33 Copynumber: 2.4 Consensus size: 33
33095764 ATGAAAGGCA
* *
33095774 CTAAGGTACCGATGGTCCTGCACCACCATCGGC
1 CTAAGTTACCGATGGTCCTGCACCACCATCGAC
*
33095807 CTAAGTTACCGATGGTCCTGTACCACCATCGAC
1 CTAAGTTACCGATGGTCCTGCACCACCATCGAC
33095840 CTAAGTTACCGAT
1 CTAAGTTACCGAT
33095853 TGTGTTCAAT
Statistics
Matches: 43, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
33 43 1.00
ACGTcount: A:0.24, C:0.33, G:0.20, T:0.23
Consensus pattern (33 bp):
CTAAGTTACCGATGGTCCTGCACCACCATCGAC
Found at i:33095982 original size:86 final size:86
Alignment explanation
Indices: 33095815--33096514 Score: 651
Period size: 86 Copynumber: 8.2 Consensus size: 86
33095805 GCCTAAGTTA
* * * * * * *
33095815 CCGATGGTCCTGTACCACCATCGACCTAAGTTACCGATTGTGTTCAATGCCCCCGCACATCCAAG
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCGTACATCCAAG
* *
33095880 GCACGAAGGTACCGATGCTTC
66 GCACCAAGGTATCGATGCTTC
* * * *
33095901 CCGATAGTCCTGCACCACCATCAACCTAAGTTACCGATGGTGTCCGATGCTCCCGTACATGCAAG
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCGTACATCCAAG
** * *
33095966 AAACCCAGGTGTCGATGCTTC
66 GCACCAAGGTATCGATGCTTC
* * * * * *
33095987 CCGATGGTCCCGCAACACCATCGACCTACGTTGCCAAT--AGTCCGGTGCTCCCAG-ACATCCAA
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCC-GTACATCCAA
* * *
33096049 GGTACCAAGGTATCGATACTGC
65 GGCACCAAGGTATCGATGCTTC
* * * ** * * *
33096071 CCCATGGTTCCGCACCACCATCGGCCTAAGTTGTCGATGGTGTTCGATGCTCTCGTACATACAAG
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCGTACATCCAAG
**
33096136 GCACCAAGGTCCCGATGCTTC
66 GCACCAAGGTATCGATGCTTC
* * * ***
33096157 CCGATGGTCCCACACCACCATCGACCTAAGTTATCGATGGTGTTCGATGCTCCTACACATCCAAG
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCGTACATCCAAG
* *
33096222 GCACCAAGGTGTCGAT-ATTGGC
66 GCACCAAGGTATCGATGCTT--C
* * * * * *
33096244 CC-ATGGTCTCGTACCACCATCGACCTAAGTTACCGATTGTGTTCGATTCTCTCGTACATCCAAG
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCGTACATCCAAG
* * *
33096308 GCACAAAGGTGTCGATAG-TTT
66 GCACCAAGGTATCGAT-GCTTC
* * * * * * * *
33096329 CCGATGGTCCCGTACCACAATCGACCCATGTTATCGATGGTTTCTGATGCTCCCGCACATCCAAG
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCGTACATCCAAG
*
33096394 GCACCAAGGTACCGATGCTTC
66 GCACCAAGGTATCGATGCTTC
* * * * *
33096415 CCGATGGTCCCGTACCACCATTGGCCTAAGTTACC-AGTGGTGTCCGATGCCCCCGTACAACCAA
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGA-TGGTGTCCGATGCTCCCGTACATCCAA
* **
33096479 GGCACCAGGGTGCCGATGCTAT-
65 GGCACCAAGGTATCGATGCT-TC
*
33096501 CCGATGCTCCCGCA
1 CCGATGGTCCCGCA
33096515 TATCCAAGGC
Statistics
Matches: 498, Mismatches: 104, Indels: 24
0.80 0.17 0.04
Matches are distributed among these distances:
84 66 0.13
85 8 0.02
86 418 0.84
87 6 0.01
ACGTcount: A:0.23, C:0.33, G:0.22, T:0.23
Consensus pattern (86 bp):
CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCGTACATCCAAG
GCACCAAGGTATCGATGCTTC
Found at i:33096410 original size:43 final size:43
Alignment explanation
Indices: 33096363--33096585 Score: 173
Period size: 43 Copynumber: 5.2 Consensus size: 43
33096353 CCCATGTTAT
* * *
33096363 CGATGGTTTCTGATGCTCCCGCACATCCAAGGCACCAAGGTAC
1 CGATGCTTTCCGATGCTCCCGTACATCCAAGGCACCAAGGTAC
* * * * *
33096406 CGATGCTTCCCGATGGTCCCGTACCA-CCATTGGC-CTAAGTTAC
1 CGATGCTTTCCGATGCTCCCGTA-CATCCA-AGGCACCAAGGTAC
* * * * * *
33096449 C-AGTGGTGTCCGATGCCCCCGTACAACCAAGGCACCAGGGTGC
1 CGA-TGCTTTCCGATGCTCCCGTACATCCAAGGCACCAAGGTAC
* * * *
33096492 CGATGCTATCCGATGCTCCCGCATATCCAAGGCACCAAGCTAC
1 CGATGCTTTCCGATGCTCCCGTACATCCAAGGCACCAAGGTAC
* ** * * * *
33096535 CAATATTTTTCGATGCTTCCGTACATCCAAGGTACCAAGGTGC
1 CGATGCTTTCCGATGCTCCCGTACATCCAAGGCACCAAGGTAC
33096578 CGATGCTT
1 CGATGCTT
33096586 CTCAATAGTG
Statistics
Matches: 133, Mismatches: 41, Indels: 12
0.72 0.22 0.06
Matches are distributed among these distances:
42 6 0.05
43 121 0.91
44 6 0.05
ACGTcount: A:0.22, C:0.33, G:0.22, T:0.22
Consensus pattern (43 bp):
CGATGCTTTCCGATGCTCCCGTACATCCAAGGCACCAAGGTAC
Found at i:33096796 original size:86 final size:84
Alignment explanation
Indices: 33096666--33097046 Score: 331
Period size: 86 Copynumber: 4.6 Consensus size: 84
33096656 CCAATATTGG
* *
33096666 CCTAAGTTACCGATGGTG-CTCGAT-TCTCTCGCACATTCAAGGCACCAAGGTACCGATGCTTCC
1 CCTAAGTTACTGATGGTGTCT-GATGT-TCTCGCACATCCAAGGCACCAAGGTACCGATGCTTCC
33096729 ATATGGTCCCGTACCACCATCGA
64 -TATGGTCCCG-ACCACCATCGA
* * * * *
33096752 CCTAAGTTACTGATGGTGTCTGATGTTCTCGCATATCGAAGGCACCAAGGTGCCGTTG-GTCCTA
1 CCTAAGTTACTGATGGTGTCTGATGTTCTCGCACATCCAAGGCACCAAGGTACCGATGCTTCCTA
* * *
33096816 ------C-ACTATCATCGG
66 TGGTCCCGACCACCATCGA
* ** *
33096828 CCTAAGTTACCGATGGTGTCTGATGCCCTCGCACATCCAAGGCACCAAGGTACCGATGCTTCTCG
1 CCTAAGTTACTGATGGTGTCTGATGTTCTCGCACATCCAAGGCACCAAGGTACCGATGCTTC-CT
* *
33096893 ATGGTCTCGCACCTCCATCGA
65 ATGGTCCCG-ACCACCATCGA
* * * **
33096914 CCTAAGTTTCTGATGGTGT-TCAATGCTT-TCGTACATCCAAGGCACCAAGGTGTCGATGCTTCC
1 CCTAAGTTACTGATGGTGTCT-GATG-TTCTCGCACATCCAAGGCACCAAGGTACCGATGCTT-C
* * *
33096977 CAATGGTCCCGAACCACCACCGG
63 CTATGGTCCCG-ACCACCATCGA
* *
33097000 CCTAAGTTACTGACGGTGTC-GATGCTC-CAGCACATCCAAGGCACCAA
1 CCTAAGTTACTGATGGTGTCTGATGTTCTC-GCACATCCAAGGCACCAA
33097047 AGTGCCAATG
Statistics
Matches: 235, Mismatches: 42, Indels: 37
0.75 0.13 0.12
Matches are distributed among these distances:
76 59 0.25
77 2 0.01
78 3 0.01
84 5 0.02
85 24 0.10
86 138 0.59
87 4 0.02
ACGTcount: A:0.23, C:0.31, G:0.22, T:0.25
Consensus pattern (84 bp):
CCTAAGTTACTGATGGTGTCTGATGTTCTCGCACATCCAAGGCACCAAGGTACCGATGCTTCCTA
TGGTCCCGACCACCATCGA
Found at i:33096958 original size:162 final size:162
Alignment explanation
Indices: 33096664--33096965 Score: 432
Period size: 162 Copynumber: 1.9 Consensus size: 162
33096654 TACCAATATT
* * *
33096664 GGCCTAAGTTACCGATGGTGCTCGATTCTCTCGCACATTCAAGGCACCAAGGTACCGATGCTTCC
1 GGCCTAAGTTACCGATGGTGCTCGATGCCCTCGCACATCCAAGGCACCAAGGTACCGATGCTTCC
* * * * *
33096729 ATATGGTCCCGTACCACCATCGACCTAAGTTACTGATGGTGTCTGATGTTCTCGCATATCGAAGG
66 AGATGGTCCCGCACCACCATCGACCTAAGTTACTGATGGTGTCTAATGTTCTCGCACATCCAAGG
33096794 CACCAAGGTGCCGTTGGTCCTACACTATCATC
131 CACCAAGGTGCCGTTGGTCCTACACTATCATC
33096826 GGCCTAAGTTACCGATGGTG-TCTGATGCCCTCGCACATCCAAGGCACCAAGGTACCGATGCTTC
1 GGCCTAAGTTACCGATGGTGCTC-GATGCCCTCGCACATCCAAGGCACCAAGGTACCGATGCTTC
* * * *
33096890 TC-GATGGTCTCGCACCTCCATCGACCTAAGTTTCTGATGGTGT-TCAATGCTT-TCGTACATCC
65 -CAGATGGTCCCGCACCACCATCGACCTAAGTTACTGATGGTGTCT-AATG-TTCTCGCACATCC
33096952 AAGGCACCAAGGTG
127 AAGGCACCAAGGTG
33096966 TCGATGCTTC
Statistics
Matches: 124, Mismatches: 12, Indels: 8
0.86 0.08 0.06
Matches are distributed among these distances:
161 3 0.02
162 118 0.95
163 3 0.02
ACGTcount: A:0.22, C:0.29, G:0.23, T:0.26
Consensus pattern (162 bp):
GGCCTAAGTTACCGATGGTGCTCGATGCCCTCGCACATCCAAGGCACCAAGGTACCGATGCTTCC
AGATGGTCCCGCACCACCATCGACCTAAGTTACTGATGGTGTCTAATGTTCTCGCACATCCAAGG
CACCAAGGTGCCGTTGGTCCTACACTATCATC
Found at i:33097605 original size:86 final size:85
Alignment explanation
Indices: 33097460--33098482 Score: 799
Period size: 86 Copynumber: 12.2 Consensus size: 85
33097450 ACCATCGACT
* * * * *
33097460 GATGGTGTCTGATTCTCTCGCACATGCAAGGCACCAAGGTGACGATGCTTCCCGATGGTCCTGTA
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCTTCCC-ATGGTCCTGCA
* *
33097525 CCACCATCGGCCTAGGTTATC
65 CCACCATCGGCCTAAGTTACC
* * * * *
33097546 GATGGTGTCGGATGCTCTCGTAAATCCAAGGCACCAAGGTGTCGATACTGGCCCATGGT-CTCGC
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCT-TCCCATGGTCCT-GC
33097610 ACCACCATCGGCCTAAGTTACC
64 ACCACCATCGGCCTAAGTTACC
* * * * *
33097632 GATGGTGTTCGATGCTCCCGTACATGCAAGGCACCAAGGT-TCCGATGCTTCTCGATGGTCC-GC
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGT-CGATGCTTC-CCATGGTCCTGC
* *
33097695 ACCATCATCGGCCTAAGTTACT
64 ACCACCATCGGCCTAAGTTACC
* * * * * *
33097717 GATGGCGTCTGATGCTCTCGCACATCCAGGGCACCAAGGTGTCGATACTGCCCCATGATCCTGCA
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCT-TCCCATGGTCCTGCA
* *
33097782 CCACCAACAGCCTAAGTTACC
65 CCACCATCGGCCTAAGTTACC
* * * ** * * *
33097803 GATGGTGTCCGTTGCTCTCGCACAT-AAAGGCATCAAGGTACCAATGGTTCCCCATTGTTCC-GC
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCTT-CCCA-TGGTCCTGC
*
33097866 ACACACTATCGGCCTAAGTTACC
64 AC-CACCATCGGCCTAAGTTACC
* * * * * * *
33097889 AATGGTATCTGATGCTGC-CGCTA-ATACAAGGCACCAAGGTGTCGATACTACCTGATGGTCCTG
1 GATGGTGTCCGATGCT-CTCGC-ACATCCAAGGCACCAAGGTGTCGATGCTTCC-CATGGTCCTG
* * *
33097952 CACCACCATTGACCTAAGTTATC
63 CACCACCATCGGCCTAAGTTACC
* * * * * ** *
33097975 GATGGTATCCGATTCTCTCGTACATCCAAGTCACGAAGGTACCGATG-GTCCCA------T--AC
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCTTCCCATGGTCCTGCAC
* * ** *
33098031 CACTATCGACCTAAGTGGCA
66 CACCATCGGCCTAAGTTACC
* * *
33098051 GATGGTGTCCAATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCATCCCAATGGTCCCGCA
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCTTCCC-ATGGTCCTGCA
33098116 CCACCATCGGCCTAAGTTACC
65 CCACCATCGGCCTAAGTTACC
* * * ** *
33098137 GATGGTGTCTGATGCTCCCACACATCCAAGGCATGAAGGTG-CTGATGCTTCCCGATGGTCCCGC
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTC-GATGCTTCCC-ATGGTCCTGC
* * ** * **
33098201 ACCATCACCAACTTAAGTTGTC
64 ACCACCATCGGCCTAAGTTACC
* * * *
33098223 GATGGTGTTCGATGCTCTCGCACATCCAAGGCACCAATGAGTCGATGTTTCCCGATGGTCCTGCA
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCTTCCC-ATGGTCCTGCA
*
33098288 CCACCATCGACCTAAGTTACC
65 CCACCATCGGCCTAAGTTACC
* * **
33098309 GATGGTGTCCAATGCTCTCGCACAT--------CCAA-G-G-CGATGCTTCCCGATAGTCCCACA
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCTTCCC-ATGGTCCTGCA
* *
33098363 CCACCACCGGCCTAAGTTATC
65 CCACCATCGGCCTAAGTTACC
* * * *
33098384 GATGGTGTTCGATGCTCCCGCACATCCAAGGCACCAAGATG-CTGATGCTTCCCGATGGTCCCGC
1 GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTC-GATGCTTCCC-ATGGTCCTGC
* * * * * *
33098448 ACCTCCTTTGACCTAAGATGCC
64 ACCACCATCGGCCTAAGTTACC
*
33098470 GATAGTGTCCGAT
1 GATGGTGTCCGAT
33098483 TGTGTCCGAT
Statistics
Matches: 736, Mismatches: 160, Indels: 82
0.75 0.16 0.08
Matches are distributed among these distances:
75 59 0.08
76 56 0.08
77 5 0.01
78 6 0.01
83 4 0.01
84 1 0.00
85 102 0.14
86 475 0.65
87 28 0.04
ACGTcount: A:0.23, C:0.31, G:0.23, T:0.24
Consensus pattern (85 bp):
GATGGTGTCCGATGCTCTCGCACATCCAAGGCACCAAGGTGTCGATGCTTCCCATGGTCCTGCAC
CACCATCGGCCTAAGTTACC
Found at i:33098351 original size:75 final size:75
Alignment explanation
Indices: 33098265--33098415 Score: 212
Period size: 75 Copynumber: 2.0 Consensus size: 75
33098255 ACCAATGAGT
* * ** * *
33098265 CGATGTTTCCCGATGGTCCTGCACCACCATCGACCTAAGTTACCGATGGTGTCCAATGCTCTCGC
1 CGATGCTTCCCGATAGTCCCACACCACCACCGACCTAAGTTACCGATGGTGTCCAATGCTCCCGC
33098330 ACATCCAAGG
66 ACATCCAAGG
* * * *
33098340 CGATGCTTCCCGATAGTCCCACACCACCACCGGCCTAAGTTATCGATGGTGTTCGATGCTCCCGC
1 CGATGCTTCCCGATAGTCCCACACCACCACCGACCTAAGTTACCGATGGTGTCCAATGCTCCCGC
33098405 ACATCCAAGG
66 ACATCCAAGG
33098415 C
1 C
33098416 ACCAAGATGC
Statistics
Matches: 66, Mismatches: 10, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
75 66 1.00
ACGTcount: A:0.21, C:0.35, G:0.21, T:0.23
Consensus pattern (75 bp):
CGATGCTTCCCGATAGTCCCACACCACCACCGACCTAAGTTACCGATGGTGTCCAATGCTCCCGC
ACATCCAAGG
Found at i:33098463 original size:161 final size:161
Alignment explanation
Indices: 33098180--33098479 Score: 424
Period size: 161 Copynumber: 1.9 Consensus size: 161
33098170 TGAAGGTGCT
* * * * * *
33098180 GATGCTTCCCGATGGTCCCGCACCATCACCAACTTAAGTTGTCGATGGTGTTCGATGCTCTCGCA
1 GATGCTTCCCGATAGTCCCACACCACCACCAACCTAAGTTATCGATGGTGTTCGATGCTCCCGCA
* * *
33098245 CATCCAAGGCACCAATGAGTCGATGTTTCCCGATGGTCCTGCACCACCATCGACCTAAGTTACCG
66 CATCCAAGGCACCAATGAGTCGATGCTTCCCGATGGTCCCGCACCACCATCGACCTAAGATACCG
*
33098310 ATGGTGTCCAATGCTCTCGCACATCCAAGGC
131 ATAGTGTCCAATGCTCTCGCACATCCAAGGC
**
33098341 GATGCTTCCCGATAGTCCCACACCACCACCGGCCTAAGTTATCGATGGTGTTCGATGCTCCCGCA
1 GATGCTTCCCGATAGTCCCACACCACCACCAACCTAAGTTATCGATGGTGTTCGATGCTCCCGCA
* * * *
33098406 CATCCAAGGCACCAA-GA-TGCTGATGCTTCCCGATGGTCCCGCACCTCCTTTGACCTAAGATGC
66 CATCCAAGGCACCAATGAGT-C-GATGCTTCCCGATGGTCCCGCACCACCATCGACCTAAGATAC
33098469 CGATAGTGTCC
129 CGATAGTGTCC
33098480 GATTGTGTCC
Statistics
Matches: 121, Mismatches: 16, Indels: 4
0.86 0.11 0.03
Matches are distributed among these distances:
159 1 0.01
160 3 0.02
161 117 0.97
ACGTcount: A:0.21, C:0.33, G:0.22, T:0.24
Consensus pattern (161 bp):
GATGCTTCCCGATAGTCCCACACCACCACCAACCTAAGTTATCGATGGTGTTCGATGCTCCCGCA
CATCCAAGGCACCAATGAGTCGATGCTTCCCGATGGTCCCGCACCACCATCGACCTAAGATACCG
ATAGTGTCCAATGCTCTCGCACATCCAAGGC
Found at i:33098680 original size:15 final size:15
Alignment explanation
Indices: 33098660--33098688 Score: 58
Period size: 15 Copynumber: 1.9 Consensus size: 15
33098650 GTTAATAATA
33098660 ATAATTATTATTATT
1 ATAATTATTATTATT
33098675 ATAATTATTATTAT
1 ATAATTATTATTAT
33098689 AATGGAATTA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 14 1.00
ACGTcount: A:0.41, C:0.00, G:0.00, T:0.59
Consensus pattern (15 bp):
ATAATTATTATTATT
Found at i:33098683 original size:12 final size:12
Alignment explanation
Indices: 33098666--33098691 Score: 52
Period size: 12 Copynumber: 2.2 Consensus size: 12
33098656 AATAATAATT
33098666 ATTATTATTATA
1 ATTATTATTATA
33098678 ATTATTATTATA
1 ATTATTATTATA
33098690 AT
1 AT
33098692 GGAATTAAAT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 14 1.00
ACGTcount: A:0.42, C:0.00, G:0.00, T:0.58
Consensus pattern (12 bp):
ATTATTATTATA
Found at i:33106127 original size:43 final size:43
Alignment explanation
Indices: 33106063--33106550 Score: 323
Period size: 43 Copynumber: 11.6 Consensus size: 43
33106053 TGGCTACATT
* * * *
33106063 TCCAAGGCAGCAAGGTACCGATTGTGTCTGATGCTCCTGCACT
1 TCCAAGGCACCAAGGTGCCGATGGTGTCTGATGCTCCTGCACA
* * *
33106106 TCCAAGGCACCAAGGTGCCGATGGTGT-TCGACGCT-GTCGCATA
1 TCCAAGGCACCAAGGTGCCGATGGTGTCT-GATGCTCCT-GCACA
* * *
33106149 TACAAGGCACCAA--T--AG-T-GT-TC-GATGCTGCCT-CATA
1 TCCAAGGCACCAAGGTGCCGATGGTGTCTGATGCT-CCTGCACA
* * *
33106184 T-CAAGGTACCAAGGTGCCGATGCT-TCTTGATGCTCCCGCACA
1 TCCAAGGCACCAAGGTGCCGATGGTGTC-TGATGCTCCTGCACA
* * * * * * *
33106226 TCCAAGGTACTAAGGTACTGGTGGTGTCCGATGCTCCTGAACA
1 TCCAAGGCACCAAGGTGCCGATGGTGTCTGATGCTCCTGCACA
* * * * *
33106269 TCCAAGGCACCAAGGTACCGGTAGTGTCTGATTCTCCCGCACA
1 TCCAAGGCACCAAGGTGCCGATGGTGTCTGATGCTCCTGCACA
* * * *
33106312 TCCAAGACACCAAGGTGGTCGGTGGTGTCTGATGCT-C-GCCCA
1 TCCAAGGCACCAAGGT-GCCGATGGTGTCTGATGCTCCTGCACA
* * * * *
33106354 TATCAAGGCACAAAGGTGTCGATGGTGTAC-AATGCTCCCGCACA
1 T-CCAAGGCACCAAGGTGCCGATGGTGT-CTGATGCTCCTGCACA
* ** **
33106398 TCCAAGGCACCAAGATGCCGATGGTGTCCAACACTGCC-GCACA
1 TCCAAGGCACCAAGGTGCCGATGGTGTCTGATGCT-CCTGCACA
* * * * *
33106441 TCC-ACGCACCAAGGTGCCAATAGTGTCCGATGCTCCAGCACA
1 TCCAAGGCACCAAGGTGCCGATGGTGTCTGATGCTCCTGCACA
* *
33106483 TCCAAGGCACCAAAGTGCC-AGTGGGGTCTGATGCTGCC-GCACA
1 TCCAAGGCACCAAGGTGCCGA-TGGTGTCTGATGCT-CCTGCACA
*
33106526 TCCAAGGCACCAAGGTACCGATGGT
1 TCCAAGGCACCAAGGTGCCGATGGT
33106551 CCCACGCCAC
Statistics
Matches: 352, Mismatches: 65, Indels: 56
0.74 0.14 0.12
Matches are distributed among these distances:
34 10 0.03
35 10 0.03
36 2 0.01
37 3 0.01
38 2 0.01
39 2 0.01
40 3 0.01
41 5 0.01
42 66 0.19
43 222 0.63
44 27 0.08
ACGTcount: A:0.24, C:0.29, G:0.26, T:0.21
Consensus pattern (43 bp):
TCCAAGGCACCAAGGTGCCGATGGTGTCTGATGCTCCTGCACA
Found at i:33106195 original size:34 final size:35
Alignment explanation
Indices: 33106129--33106195 Score: 91
Period size: 35 Copynumber: 1.9 Consensus size: 35
33106119 GGTGCCGATG
*
33106129 GTGTTCGACGCTGTCGCATATACAAGGCACCAATA
1 GTGTTCGACGCTGCCGCATATACAAGGCACCAATA
* * *
33106164 GTGTTCGATGCTGCCTCATAT-CAAGGTACCAA
1 GTGTTCGACGCTGCCGCATATACAAGGCACCAA
33106196 GGTGCCGATG
Statistics
Matches: 28, Mismatches: 4, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
34 10 0.36
35 18 0.64
ACGTcount: A:0.27, C:0.25, G:0.22, T:0.25
Consensus pattern (35 bp):
GTGTTCGACGCTGCCGCATATACAAGGCACCAATA
Found at i:33106593 original size:76 final size:74
Alignment explanation
Indices: 33106508--33106666 Score: 183
Period size: 76 Copynumber: 2.1 Consensus size: 74
33106498 TGCCAGTGGG
* * * *
33106508 GTCTGATGCTGCCGCACATCCAAGGCACCAAGGTACCGATGGTCCCACGCCACCATCGACCTAAG
1 GTCTGATGCTCCCGCACATACAAGGCACCAAGAT-CCGATGGTCCCACACCACCATCGACCT-AG
33106573 TTACTAATGGT
64 TTACTAATGGT
* * * * * * *
33106584 GTCTGATGCTCCCGCTCATACAAGGTACCAAGATGCGATGGTCTCGCACCACCTTCGGCCTAGTT
1 GTCTGATGCTCCCGCACATACAAGGCACCAAGATCCGATGGTCCCACACCACCATCGACCTAGTT
*
33106649 ACTAGTGGT
66 ACTAATGGT
*
33106658 GTCCGATGC
1 GTCTGATGC
33106667 CCTCACACGA
Statistics
Matches: 70, Mismatches: 13, Indels: 2
0.82 0.15 0.02
Matches are distributed among these distances:
74 20 0.29
75 21 0.30
76 29 0.41
ACGTcount: A:0.22, C:0.31, G:0.24, T:0.23
Consensus pattern (74 bp):
GTCTGATGCTCCCGCACATACAAGGCACCAAGATCCGATGGTCCCACACCACCATCGACCTAGTT
ACTAATGGT
Found at i:33108135 original size:43 final size:43
Alignment explanation
Indices: 33108067--33109376 Score: 830
Period size: 43 Copynumber: 30.6 Consensus size: 43
33108057 AATGATAAAC
* *
33108067 CTCCCGCACATCCAAGGCACTAAGGTACCGGTGGTGTCCGAGG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * *
33108110 CTCCTGCACATCCAAGGCACCAAGGTACCGATGCT-TCTCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTC-CGATG
* * *
33108153 CTCTCGCATATCCAAGGCACCAAGGTACCGGTGGTGTTCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* ** * *
33108196 CTCGCTTACATCCAAGGCACCAAGGTGCCGGTGGTGTCTGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
*** * ***** *
33108239 CAT-ATTCACATCCAAGGTACCAAGGTGTTATTGGTGTTCGATG
1 C-TCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * * * *
33108282 CTCCCGTACATCCAAGGTACCAAGATGCCAGTGGTGTTCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * * * * * *
33108325 CTCCTGCATATCTAAGGTACCAAGGTATCGAT-GTGTCCTATA
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * * * *
33108367 CTCCCACACATCCAAGACACCAAGGTGCCGATGGTTTTCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * *
33108410 CTACCGCACATCCAAGGCACCAAGATACCAGTGGTGTCTGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * * *
33108453 CTCCCACATATCCAAGGCACTAAGGTACCGGTAGTGTCCCATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * * *
33108496 CTGCCACACATCCAAGGCACCAAGTTACCGATGGTGTCCAATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * * * * *
33108539 CTCTCGCACATACAAGGTACCAAGTTATCGATGGT-TCCTAATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCC-GATG
* * ** * *
33108582 GTCCCGCACCGT-CATCG-ACCTAAGTTACAGGTGGTGTCCGATG
1 CTCCCGCA-CATCCAAGGCACC-AAGGTACCGGTGGTGTCCGATG
* * * *** * *
33108625 C-CCCTGCACATACAAGGCACAAAAGTGTTGATGGTTTCCGATG
1 CTCCC-GCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* ** ** *
33108668 GTCCCGCATCA-CCATCG-ACCTAAGACACCGGT-GTGTCTGATG
1 CTCCCGCA-CATCCAAGGCACC-AAGGTACCGGTGGTGTCCGATG
* * * * * * *
33108710 CCCCCACACAACCAAGGCACCAAAGTGCCGATGCTGTCCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * **** *
33108753 CTCCCGTACATCCAAGGCACCAAGCTATTATTGCTTGT-CGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTG-GTGTCCGATG
* *
33108796 CTCCCGCACATCCAAGGTATC---GT---GGT-GTGT--GATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* ** * * **
33108830 CTCCCGCATATCCAAGGTTCTAAGGTGCTAGTGGTGTCCTG-TG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCC-GATG
* * * ** *
33108873 TTCCCGCACATCTAAGGCAACAAGGTATTGGTGGTGTCCGAGG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * *
33108916 CTTCTGCACATCCAAGGCACCAAGGTGCCGTTGGTGTCCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
** * * *
33108959 CTGACGCACATCCAAGGCACCATGG-AGCCGATGCT-TCTCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTA-CCGGTGGTGTC-CGATG
* * *
33109002 CTCCCGCAAATCCAAGGTACCAAGGTACCGGTGGTGTCTGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * * **
33109045 CTCCAGCACATCCAAGGCACTAAGGTGCCGATGGTAACCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* *
33109088 CTCCCGCACATCAAAGGCACCAAGGTACCGGTGGTGTTCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * *
33109131 CTCCCGCATATCCAAGGTACCAAGGTACCGGTGGTGTTCGATC
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * * * *
33109174 CTCTCGTACATCCAAGGTACCAAGGTAACGGTGGTGTTCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * *
33109217 CTCCCGCATATCCAAGGTACCAAGGTACCGATGGTGTCCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* ** * *
33109260 GTCCAACACATCCAAGACCAAAAGCACCAAGGTGCCGATGGTGTCCGATG
1 CTCCCGCACATCCAAG-------GCACCAAGGTACCGGTGGTGTCCGATG
** * * * * * **
33109310 CTCCTACACATCTAAGGAACTAAGGTGCCGATAATGTCCGATG
1 CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
* * *
33109353 GTGCCGTACATCCAAGGCACCAAG
1 CTCCCGCACATCCAAGGCACCAAG
33109377 TTATCGATGC
Statistics
Matches: 974, Mismatches: 252, Indels: 82
0.74 0.19 0.06
Matches are distributed among these distances:
34 21 0.02
35 3 0.00
37 3 0.00
40 3 0.00
41 6 0.01
42 73 0.07
43 806 0.83
44 21 0.02
50 38 0.04
ACGTcount: A:0.24, C:0.29, G:0.25, T:0.22
Consensus pattern (43 bp):
CTCCCGCACATCCAAGGCACCAAGGTACCGGTGGTGTCCGATG
Found at i:33108758 original size:85 final size:86
Alignment explanation
Indices: 33108594--33108758 Score: 199
Period size: 85 Copynumber: 1.9 Consensus size: 86
33108584 CCCGCACCGT
** ** ** *
33108594 CATCGACCTAAGTTACAGGTGGTGTCCGATGCCCCTGCACATACAAGGCACAAAAGTGTTGATGG
1 CATCGACCTAAGACACAGGTGGTGTCCGATGCCCCCACACATACAAGGCACAAAAGTGCCGATGC
* *
33108659 TTTCCGATGGTCCCGCATCAC
66 TGTCCGATGCTCCCGCATCAC
* * *
33108680 CATCGACCTAAGACACCGGT-GTGTCTGATGCCCCCACACA-ACCAAGGCACCAAAGTGCCGATG
1 CATCGACCTAAGACACAGGTGGTGTCCGATGCCCCCACACATA-CAAGGCACAAAAGTGCCGATG
33108743 CTGTCCGATGCTCCCG
65 CTGTCCGATGCTCCCG
33108759 TACATCCAAG
Statistics
Matches: 66, Mismatches: 12, Indels: 3
0.81 0.15 0.04
Matches are distributed among these distances:
84 1 0.02
85 48 0.73
86 17 0.26
ACGTcount: A:0.24, C:0.32, G:0.24, T:0.20
Consensus pattern (86 bp):
CATCGACCTAAGACACAGGTGGTGTCCGATGCCCCCACACATACAAGGCACAAAAGTGCCGATGC
TGTCCGATGCTCCCGCATCAC
Found at i:33109618 original size:43 final size:43
Alignment explanation
Indices: 33109570--33109666 Score: 115
Period size: 43 Copynumber: 2.3 Consensus size: 43
33109560 ATCATACAAT
*
33109570 CAAGGCACCAAAGTGCCGATA-CTGTCCGATGCTCCCGCACATC
1 CAAGGCACCAAAGTGCCGATAGCTGT-CGATGCTCCCACACATC
* ** * *
33109613 CAAGGCACCAAGGTGTTGATAGTTGTTGATGCTCCCACACATC
1 CAAGGCACCAAAGTGCCGATAGCTGTCGATGCTCCCACACATC
*
33109656 CGAGGCACCAA
1 CAAGGCACCAA
33109667 GGTATCGAAG
Statistics
Matches: 46, Mismatches: 7, Indels: 2
0.84 0.13 0.04
Matches are distributed among these distances:
43 43 0.93
44 3 0.07
ACGTcount: A:0.27, C:0.32, G:0.23, T:0.19
Consensus pattern (43 bp):
CAAGGCACCAAAGTGCCGATAGCTGTCGATGCTCCCACACATC
Found at i:33109667 original size:43 final size:43
Alignment explanation
Indices: 33109597--33109696 Score: 130
Period size: 43 Copynumber: 2.3 Consensus size: 43
33109587 GATACTGTCC
* * * *
33109597 GATGCTCCCGCACATCCAAGGCACCAAGGTGTTGATAG-TTGTT
1 GATGCTCCCACACATCCAAGGCACCAAGGTATCGA-AGCTTCTT
*
33109640 GATGCTCCCACACATCCGAGGCACCAAGGTATCGAAGCTTCTT
1 GATGCTCCCACACATCCAAGGCACCAAGGTATCGAAGCTTCTT
*
33109683 GATGGTCCCACACA
1 GATGCTCCCACACA
33109697 AACATTGGCA
Statistics
Matches: 50, Mismatches: 6, Indels: 2
0.86 0.10 0.03
Matches are distributed among these distances:
42 2 0.04
43 48 0.96
ACGTcount: A:0.25, C:0.30, G:0.23, T:0.22
Consensus pattern (43 bp):
GATGCTCCCACACATCCAAGGCACCAAGGTATCGAAGCTTCTT
Found at i:33110077 original size:86 final size:86
Alignment explanation
Indices: 33109901--33110129 Score: 218
Period size: 86 Copynumber: 2.7 Consensus size: 86
33109891 TAAGATGTCG
* * * * * * *
33109901 ATGGTACCGCACCACCATCGATCTAAGTTACCGATTA-TGTCCGATGCTCTCGCACATCCAAGGT
1 ATGGTCCCACACCATCATCGACCTAAGTTACCGA-TAGTGTCTGATGCTCCCGCACATCCAAGGC
*
33109965 AACAAGATACCGATGCTTCTCA
65 AACAAGATACCGATACTTCTCA
* * * * * *
33109987 ATGGT-CTAGTACTATCATCGACCTAAGTTACCGATGGTGTCTAATGCTCCCGCACGTCCAAGGC
1 ATGGTCCCA-CACCATCATCGACCTAAGTTACCGATAGTGTCTGATGCTCCCGCACATCCAAGGC
* *
33110051 ACCAATG-TACCGATACTTC-CTG
65 AACAA-GATACCGATACTTCTC-A
33110073 ATGGTCCCACACCATCA-CTGACCTAAGTTACCGATAGTGT-TCGATGCTCCCGCACAT
1 ATGGTCCCACACCATCATC-GACCTAAGTTACCGATAGTGTCT-GATGCTCCCGCACAT
33110130 GTCTGAAATA
Statistics
Matches: 115, Mismatches: 21, Indels: 14
0.77 0.14 0.09
Matches are distributed among these distances:
85 5 0.04
86 107 0.93
87 3 0.03
ACGTcount: A:0.26, C:0.31, G:0.18, T:0.25
Consensus pattern (86 bp):
ATGGTCCCACACCATCATCGACCTAAGTTACCGATAGTGTCTGATGCTCCCGCACATCCAAGGCA
ACAAGATACCGATACTTCTCA
Found at i:33110692 original size:43 final size:43
Alignment explanation
Indices: 33110626--33111613 Score: 574
Period size: 43 Copynumber: 22.9 Consensus size: 43
33110616 TATTTTTAGC
* * *
33110626 CCGATGCTCCCGCACAACCAAGGCATCAAGGTGTCGATGGTAT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * *
33110669 CCGATGCTCTCGCACATCTAAGGCACCAAGCTGTCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * * * * * *
33110712 CTGAGGC-CTTCGCACAACTAAGGCACCAAGGTGCTGGTGGTGGTGT
1 CCGATGCTC-CCGCACATCCAAGGCACCAAGGTG-T--CGATGGTGT
* * * * * *
33110758 TCGAGGCTCTCGTACATCCAAGGCACTAAGGTGCCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* *
33110801 CCAATGCTACCGCACATCCAAGGCACCAAGGTGTCGATGGT-T
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * * * * *
33110843 CTCAATGCTCCCGTACATCCAAGTCACCAAAGTTTTGATGGTGT
1 C-CGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* ** * *
33110887 CCGATGCTCCCGTACATCCAAGTTATCAAGGTGTCAATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
** * ** ** *
33110930 CCGATGCTCCTACACATCCAAGGTATTAAGGTACCGATAGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* ** * *
33110973 CTGA-GACTCCCGCACATCGGAGGTACCAAGGT-ACTGATGGTGT
1 CCGATG-CTCCCGCACATCCAAGGCACCAAGGTGTC-GATGGTGT
* * ** *
33111016 CCGAGGCTCCCGCACGTCCAAGGCACCAAGGTACCGTTGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * *
33111059 CCGATGCTGCCGCACATCCAAGGCACCAAGGTG-CTGGTGGTAT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTC-GATGGTGT
* * * *
33111102 TCGATGCTCCCGCATATCCAAGGTACCAAGGTTTCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * * * * * *
33111145 CCGATGCTCCTGTATATCCAAGACACCAAAGTG-CCATTGGTTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGA-TGGTGT
* ****** * * *
33111188 TCGATGGGGTTACATATCCAAGGCACCAAGGTGCCGATAGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * *
33111231 CCGATGCTCCCACACATCCAAGGCACCAAGGTGTCGGTAGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
** * * * * *
33111274 TTGACGCTCCCGCACATCCAAGGTACTAAGTTATCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * *
33111317 TCGATGCTCCCACACATCCAAGGGACCAAGGTG-CAGATGGTTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTC-GATGG-TGT
* ** * * * ** * * *
33111361 -CGATGGTTTCGCACTAT-TATCGTC-TTAAGTTATCGGTGGTGT
1 CCGATGCTCCCGCAC-ATCCA-AGGCACCAAGGTGTCGATGGTGT
* * *
33111403 CCGACGC-CCTTGCACATCCAAGGTACCAAGGTGTCGATGGT-T
1 CCGATGCTCC-CGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * ** * *
33111445 CCCGATAG-TCCTGGACCA-CCATCG-ACCTAA-GT-TACCAGTAGTGT
1 -CCGAT-GCTCCCGCA-CATCCAAGGCACC-AAGGTGT-CGA-TGGTGT
* * * * **
33111489 TCGATGC-CCTCGCACAACCAAGGCACCAAAGTCTCGATACTGT
1 CCGATGCTCC-CGCACATCCAAGGCACCAAGGTGTCGATGGTGT
* * * *
33111532 CTGATGCTCCCTCACATCCAAGGCACCAAGCTGTCGATGCTTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATG-GTGT
* *
33111576 -CGATGCTCTCGCACATCCAAGGCACCAAGGTGCCGATG
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATG
33111614 CTTCTCGATG
Statistics
Matches: 724, Mismatches: 181, Indels: 80
0.74 0.18 0.08
Matches are distributed among these distances:
41 1 0.00
42 28 0.04
43 628 0.87
44 33 0.05
45 1 0.00
46 32 0.04
47 1 0.00
ACGTcount: A:0.23, C:0.28, G:0.25, T:0.23
Consensus pattern (43 bp):
CCGATGCTCCCGCACATCCAAGGCACCAAGGTGTCGATGGTGT
Found at i:33111614 original size:43 final size:42
Alignment explanation
Indices: 33111489--33111633 Score: 132
Period size: 43 Copynumber: 3.4 Consensus size: 42
33111479 CCAGTAGTGT
* * **
33111489 TCGATGC-CCTCGCACAACCAAGGCACCAAAGT-CTCGATACTG
1 TCGATGCTCC-CGCACATCCAAGGCACCAAGGTGC-CGATGTTG
* * *
33111531 TCTGATGCTCCCTCACATCCAAGGCACCAAGCTGTCGATGCTTG
1 TC-GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATG-TTG
* *
33111575 TCGATGCTCTCGCACATCCAAGGCACCAAGGTGCCGATGCTTC
1 TCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATG-TTG
* *
33111618 TCGATGGTCCCACACA
1 TCGATGCTCCCGCACA
33111634 AACATCTGTA
Statistics
Matches: 84, Mismatches: 15, Indels: 7
0.79 0.14 0.07
Matches are distributed among these distances:
42 2 0.02
43 76 0.90
44 6 0.07
ACGTcount: A:0.23, C:0.35, G:0.21, T:0.21
Consensus pattern (42 bp):
TCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGTTG
Found at i:33112143 original size:86 final size:85
Alignment explanation
Indices: 33111860--33112145 Score: 263
Period size: 86 Copynumber: 3.3 Consensus size: 85
33111850 CCACCGTCGG
* ** *
33111860 CCTAAGTTACCGATGGTGTCTGATGCGTC-CGCATATCCAAGATAAC-AAGATACCGATGCTTCC
1 CCTAAGTTACCGATGGTGTC-GATGC-TCTCGCACATCCAA-AGCACAAAGGTACCGATGCTTCC
* * * *
33111923 TGATGGTCCTGCACCACCATTGG
63 TGATGGTCCCGCACCATCATCGA
* * * * * * * *
33111946 TCTAAGTTACCGATGTTGCCCGATGCTGTCGCACATCCAAGGCTCAAATGTGCCGATGCTT-CTC
1 CCTAAGTTACCGATGGTG-TCGATGCTCTCGCACATCCAAAGCACAAAGGTACCGATGCTTCCT-
* *
33112010 GATGGTCCCGTACCATCATCAA
64 GATGGTCCCGCACCATCATCGA
* * * * *
33112032 CCTAAGTTACCGATTGTGTCTGATGCTCTCGCACGTCCAAAGCACCAAGGTACTGGTGCTTCCTG
1 CCTAAGTTACCGATGGTGTC-GATGCTCTCGCACATCCAAAGCACAAAGGTACCGATGCTTCCTG
*
33112097 ATGGTCCCGCACCATCACCGA
65 ATGGTCCCGCACCATCATCGA
*
33112118 CCTAAGTTACCAATGGTGTTCGATGCTC
1 CCTAAGTTACCGATGGTG-TCGATGCTC
33112146 CCGTACATGT
Statistics
Matches: 157, Mismatches: 36, Indels: 14
0.76 0.17 0.07
Matches are distributed among these distances:
85 5 0.03
86 147 0.94
87 5 0.03
ACGTcount: A:0.22, C:0.30, G:0.22, T:0.26
Consensus pattern (85 bp):
CCTAAGTTACCGATGGTGTCGATGCTCTCGCACATCCAAAGCACAAAGGTACCGATGCTTCCTGA
TGGTCCCGCACCATCATCGA
Found at i:33112748 original size:43 final size:43
Alignment explanation
Indices: 33112684--33113532 Score: 613
Period size: 43 Copynumber: 20.0 Consensus size: 43
33112674 TATTTTTAGC
* * * *
33112684 CCGATGCTCCCACACAACCAAGGCACTAAGGTGCTGATGGTTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * *
33112727 CCAATGCTCCCGCACATCCAAGGCACCAAGCTGTCGATGGTGTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGT-TT
* * ** * * * * *
33112771 -CGAGGCCCCCGTGCATTCAAAGCACCAAGGTACCGATAGTAT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * * * *
33112813 CTGAGGCTCTCGCACATCCAAGGCACCAAGGTACCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* ** *
33112856 CCAAT-CTTGTCGCACATCCAAGGCACGAAGGTGCCGATGG-TT
1 CCGATGC-TCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * * **
33112898 CTCGATGCTCTCTCACATCTAAGGCACCAAGGTTTCGATGGTGTT
1 C-CGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGT-TT
** * * * *
33112943 -CGATGCTCCTACACATCCAAGGCATCAAGGTACCGGTGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * * * *
33112985 CCGATGCTCCCGCACATCTAAGGCATCAAAGTACCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * * *
33113028 CTGATGCTCCCGTACATCCAAGGTATCAAGGTGCC----G---
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * * *
33113064 --G-TGCTCTCGCACATCCGAGGTACCAAGGTACCGATGGTGTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGT-TT
* * * *
33113105 -CGAGGCTCCCCCACATCCAAGGCACCAAAGTGCC-ATTGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGA-TGGTTT
* * *
33113147 CCGATGCTGCCGCACATCCAAGGCACCAAGGTGCCAAT-GCTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * * *
33113189 CTCGATGCTCCCGCACATCCAAGGCACCAAGGTACCGGTAGTGT
1 C-CGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * *
33113233 CAGATGCTCCTGCAAATCCAAGGCACCAAGGTGCCGATGGTGTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGT-TT
* * * ** * ** *
33113277 -CGATGCTCCCGTATATCCAAGGTAGAAAGATGCTAATGGTCT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* ** * * *
33113319 CCGATGCTCTCTTAAATCCAAGACACCAAGGTGTCGATGGTTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * * * *
33113362 TCGATGCTGCCACACATCCAAGGCACCAAGGTACCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* * *
33113405 CCGTTGCTCCCACACATCCAAGGCACCAAGGT-CACGGT-GTTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGC-CGATGGTT-T
** * * * * *
33113448 CCGATGCTGTCACACATTCAAGGCACCAAGTTACCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
* *
33113491 CCGATGCTCCCGCACATCCAAGGCATCAAAGTGCCGATGGTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTT
33113533 ATTGATGATC
Statistics
Matches: 629, Mismatches: 148, Indels: 58
0.75 0.18 0.07
Matches are distributed among these distances:
33 26 0.04
34 1 0.00
37 1 0.00
39 1 0.00
42 15 0.02
43 572 0.91
44 11 0.02
45 2 0.00
ACGTcount: A:0.24, C:0.30, G:0.24, T:0.21
Consensus pattern (43 bp):
CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTTT
Found at i:33113165 original size:205 final size:205
Alignment explanation
Indices: 33112865--33113268 Score: 483
Period size: 205 Copynumber: 2.0 Consensus size: 205
33112855 TCCAATCTTG
* * * * * * *
33112865 TCGCACATCCAAGGCACGAAGGTGCCGATGGTTCTCGATGCTCTCTCACATCTAAGGCACCAAGG
1 TCGCACATCCAAGGCACCAAGGTACCGATGGTTCTCGAGGCTCCCCCACATCCAAGGCACCAAAG
* * * * ** *
33112930 TTTCGATGGTGTTCGATGCTCCTACACATCCAAGGCATCAAGGTACCGGTGGTGTC-CGATGCTC
66 TTGCCATGGTGTCCGATGCTCCTACACATCCAAGGCACCAAGGTACCAATGCT-TCTCGATGCTC
* * * * * * * *
33112994 CCGCACATCTAAGGCATCAAAGTACCGATGGTGTCTGATGCTCCCGTACATCCAAGGTATCAAGG
130 CCGCACATCCAAGGCACCAAAGTACCGATAGTGTCAGATGCTCCCGCAAATCCAAGGCACCAAGG
33113059 TGCCGGTGCTC
195 TGCCGGTGCTC
* *
33113070 TCGCACATCCGAGGTACCAAGGTACCGATGGTGT-TCGAGGCTCCCCCACATCCAAGGCACCAAA
1 TCGCACATCCAAGGCACCAAGGTACCGATGGT-TCTCGAGGCTCCCCCACATCCAAGGCACCAAA
* *
33113134 G-TGCCATTGGTGTCCGATGCTGCC-GCACATCCAAGGCACCAAGGTGCCAATGCTTCTCGATGC
65 GTTGCCA-TGGTGTCCGATGCT-CCTACACATCCAAGGCACCAAGGTACCAATGCTTCTCGATGC
* * *
33113197 TCCCGCACATCCAAGGCACCAAGGTACCGGTAGTGTCAGATGCTCCTGCAAATCCAAGGCACCAA
128 TCCCGCACATCCAAGGCACCAAAGTACCGATAGTGTCAGATGCTCCCGCAAATCCAAGGCACCAA
33113262 GGTGCCG
193 GGTGCCG
33113269 ATGGTGTTCG
Statistics
Matches: 166, Mismatches: 29, Indels: 8
0.82 0.14 0.04
Matches are distributed among these distances:
204 5 0.03
205 158 0.95
206 3 0.02
ACGTcount: A:0.23, C:0.31, G:0.25, T:0.21
Consensus pattern (205 bp):
TCGCACATCCAAGGCACCAAGGTACCGATGGTTCTCGAGGCTCCCCCACATCCAAGGCACCAAAG
TTGCCATGGTGTCCGATGCTCCTACACATCCAAGGCACCAAGGTACCAATGCTTCTCGATGCTCC
CGCACATCCAAGGCACCAAAGTACCGATAGTGTCAGATGCTCCCGCAAATCCAAGGCACCAAGGT
GCCGGTGCTC
Found at i:33113563 original size:86 final size:86
Alignment explanation
Indices: 33113372--33113580 Score: 237
Period size: 86 Copynumber: 2.4 Consensus size: 86
33113362 TCGATGCTGC
* * * *
33113372 CACACATCCAAGGCACCAAGGTACCGATGGTGTCCGTTGCTCCCACACATCCAAGGCACCAAGGT
1 CACACATTCAAGGCACCAAGTTACCGATGGTGTCCGATGCTCCCACACATCCAAGGCACCAAAGT
* * * *
33113437 CACGGTGTTGTCCGATGCTGT
66 CACGATGTTATCCGATGATCT
* *
33113458 CACACATTCAAGGCACCAAGTTACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCATCAAAGT
1 CACACATTCAAGGCACCAAGTTACCGATGGTGTCCGATGCTCCCACACATCCAAGGCACCAAAGT
*
33113523 GC-CGATGGTTAT-TGATGATCT
66 -CACGAT-GTTATCCGATGATCT
* *
33113544 CACACCATT-ATCGGC-CCAAGTTACCAATGGTGTCCGA
1 CACA-CATTCA-AGGCACCAAGTTACCGATGGTGTCCGA
33113581 CGCCTCTACA
Statistics
Matches: 106, Mismatches: 13, Indels: 8
0.83 0.10 0.06
Matches are distributed among these distances:
86 94 0.89
87 12 0.11
ACGTcount: A:0.25, C:0.31, G:0.22, T:0.22
Consensus pattern (86 bp):
CACACATTCAAGGCACCAAGTTACCGATGGTGTCCGATGCTCCCACACATCCAAGGCACCAAAGT
CACGATGTTATCCGATGATCT
Found at i:33113981 original size:76 final size:76
Alignment explanation
Indices: 33113900--33114040 Score: 167
Period size: 76 Copynumber: 1.9 Consensus size: 76
33113890 CGATGCTCCT
* *
33113900 GCACATCCATGACACCAAGGTCCCGATGGTCCCGCAACACCATCGAT-CTAAGTTATCAATGGTG
1 GCACATCCAAGACACCAAGGTCCCGATGGTCCCGCAACACCATCG-TCCAAAGTTATCAATGGTG
33113964 TCTACTGTTCTC
65 TCTACTGTTCTC
* ** ** * * * *
33113976 GCACATCGAAGGTACCAAGGTGTCGATGGTCTCGTACCACCATCGTCCAAAGTTATCGATGGTGT
1 GCACATCCAAGACACCAAGGTCCCGATGGTCCCGCAACACCATCGTCCAAAGTTATCAATGGTGT
33114041 TTGATGCCTT
Statistics
Matches: 53, Mismatches: 11, Indels: 2
0.80 0.17 0.03
Matches are distributed among these distances:
75 1 0.02
76 52 0.98
ACGTcount: A:0.25, C:0.28, G:0.22, T:0.25
Consensus pattern (76 bp):
GCACATCCAAGACACCAAGGTCCCGATGGTCCCGCAACACCATCGTCCAAAGTTATCAATGGTGT
CTACTGTTCTC
Found at i:33114248 original size:90 final size:86
Alignment explanation
Indices: 33113998--33114319 Score: 331
Period size: 86 Copynumber: 3.7 Consensus size: 86
33113988 TACCAAGGTG
* * * * * * *
33113998 TCGATGGTCTCGTACCACCATCGTCCAAAGTTATCGATGGTGTTTGATGC-CTTCGCATATCTAA
1 TCGATGGTCTCGTACCATCATCGACCTAAGTTATCGATGGTGTCTGATGCTC-CCGCACATCCAA
* * *
33114062 GACAACAAGATACCGATGCTTC
65 GGCACCAAGGTACCGATGCTTC
* * * *
33114084 TCGATGGTCTCGGACCACCATCGGCCTAAGTTATCGATGGTGTCTGATGCTCTCGCACATCCAAG
1 TCGATGGTCTCGTACCATCATCGACCTAAGTTATCGATGGTGTCTGATGCTCCCGCACATCCAAG
* *
33114149 GCACGAAGGTACCGATGCTTT
66 GCACCAAGGTACCGATGCTTC
* * * * *
33114170 TTGATGGTGTCGTACCATCGTCGACCTAAGTTATCGATGGATGGTGTTCGATGCTCCCGCACGTC
1 TCGATGGTCTCGTACCATCATCGACCTAAGTTATCGATGG-T-GT-CT-GATGCTCCCGCACATC
33114235 CAAGGCACCAAGGTACCGATGCTTC
62 CAAGGCACCAAGGTACCGATGCTTC
* * * * * * * *
33114260 TCGATGGTCCCGTACCATCACCGACCTGAGTTACCAATAGTGTCCGATGCTCCCGAACAT
1 TCGATGGTCTCGTACCATCATCGACCTAAGTTATCGATGGTGTCTGATGCTCCCGCACAT
33114320 GTCTGAAATA
Statistics
Matches: 196, Mismatches: 35, Indels: 10
0.81 0.15 0.04
Matches are distributed among these distances:
86 120 0.61
87 2 0.01
88 4 0.02
89 2 0.01
90 68 0.35
ACGTcount: A:0.22, C:0.28, G:0.23, T:0.26
Consensus pattern (86 bp):
TCGATGGTCTCGTACCATCATCGACCTAAGTTATCGATGGTGTCTGATGCTCCCGCACATCCAAG
GCACCAAGGTACCGATGCTTC
Found at i:33114908 original size:43 final size:43
Alignment explanation
Indices: 33114851--33115584 Score: 580
Period size: 43 Copynumber: 17.1 Consensus size: 43
33114841 TTTTTAGTTT
* * **
33114851 GATGCTCCCGCACATCCCAGGCACCAAGGTGCCGATGTTGTTT
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * *
33114894 GATGCTCCCACACATCGAAGGCACCAAGGTGTCGATGGTGTCC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* *
33114937 GAGGCTCCCGGACATCCAAGGCACCAAGGTGCCTG-TGGTGTCC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCC-GATGGTGTCC
* * * * * * *
33114980 GAGGGTCTCG-ATCATCCATGGCACGAAAGTGCCGATGAT-TCTC
1 GATGCTCCCGCA-CATCCAAGGCACCAAGGTGCCGATGGTGTC-C
** * * *
33115023 GATGCTCCCGCACATTGAAGGCACTAAGGTTCCGGTGGTGTCC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * * *
33115066 GATGCTCCCGCACATCAAAGGCATCAAGGTGTCGGTGGTGTCC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * * * * *
33115109 GATGCTCTCTCACATCTATGGCACCAAGGTGTCGATAGTGTCC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* ** * * * *
33115152 GATGCTCCCGCACTTCTGAGGGACTAAGGTGTCGATGG-GTCT
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * * *
33115194 GAGGCTCCCGCACATCTAAGGCACCAAGGTGTCGATGGTGTTC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * * * *
33115237 GAGGCTCCCGTACATCCAAGGCACCAAGGTACCGATAGTGTCT
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* ** * * *
33115280 GATGCTCCCGCACATCCAAAGCTTCAAGGTACCGGTGGTGTTC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * * *** *
33115323 GATGCTCCTGCATATCCTAGGTTTCAAGGTACCGATGGTGTCC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * * * * ** * *
33115366 GATGCTCGCGTACATCTAAGACATCAAGGTTTCGATGGTTTTC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
** * * * * * *
33115409 GATGCTGTCGCACATCTAAGACAGCAAGATACCAATGGTGTCC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
** * *
33115452 GATGCTCCTACACATCGAAGGCACCAAGGTGCCGGTGGTGTCC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * * * *
33115495 -ATTGCTACTGCACATCCAAGGCACCAAGTTGTCAATGGTGTCC
1 GA-TGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
* * *
33115538 GATGCTCTCACACATCCAAGGCACCAAGGTGCTGATGGT-TCTC
1 GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTC-C
33115581 GATG
1 GATG
33115585 GTCCTTCACC
Statistics
Matches: 551, Mismatches: 130, Indels: 20
0.79 0.19 0.03
Matches are distributed among these distances:
42 43 0.08
43 503 0.91
44 5 0.01
ACGTcount: A:0.22, C:0.28, G:0.27, T:0.23
Consensus pattern (43 bp):
GATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGTCC
Found at i:33115610 original size:86 final size:86
Alignment explanation
Indices: 33115438--33115706 Score: 257
Period size: 86 Copynumber: 3.1 Consensus size: 86
33115428 GACAGCAAGA
* * * *
33115438 TACCAATGGTGTCCGATGCTCCTACACATCGAAGGCACCAAGGTGCCGGTGGTGTC-C-ATTGCT
1 TACCAATGGTGTCCGATGCTCCTACACATCCAAGGCACCAAGGTGCTGATGGT-TCTCGA-TGGT
* **
33115501 ACTGCA-CATCCAAGGCACC-AAGT
64 CCTGCACCA-CCATCG-ACCTAAGT
**
33115524 TGTCAATGGTGTCCGATGCT-CTCACACATCCAAGGCACCAAGGTGCTGATGGTTCTCGATGGTC
1 TACCAATGGTGTCCGATGCTCCT-ACACATCCAAGGCACCAAGGTGCTGATGGTTCTCGATGGTC
*
33115588 CTTCACCACCATCGACCTAAGT
65 CTGCACCACCATCGACCTAAGT
** * * *
33115610 TACCGGTAGTGTCTGATGCCCCTACACATCCAA-GCACCAAGGTG-TCGATGGTTCTCTG-TGGT
1 TACCAATGGTGTCCGATGCTCCTACACATCCAAGGCACCAAGGTGCT-GATGGTTCTC-GATGGT
* *
33115672 CCCGCACTACCATCGACCTAAGT
64 CCTGCACCACCATCGACCTAAGT
*
33115695 TACCAGTGGTGT
1 TACCAATGGTGT
33115707 TCGAGGCCCC
Statistics
Matches: 153, Mismatches: 22, Indels: 17
0.80 0.11 0.09
Matches are distributed among these distances:
84 1 0.01
85 62 0.41
86 85 0.56
87 5 0.03
ACGTcount: A:0.22, C:0.30, G:0.23, T:0.24
Consensus pattern (86 bp):
TACCAATGGTGTCCGATGCTCCTACACATCCAAGGCACCAAGGTGCTGATGGTTCTCGATGGTCC
TGCACCACCATCGACCTAAGT
Found at i:33115716 original size:85 final size:86
Alignment explanation
Indices: 33115547--33115734 Score: 231
Period size: 85 Copynumber: 2.2 Consensus size: 86
33115537 CGATGCTCTC
**
33115547 ACACATCCAAGGCACCAAGGTGCTGATGGTTCTCGATGGTCCTTCACCACCATCGACCTAAGTTA
1 ACACATCCAAGGCACCAAGGTGCTGATGGTTCTCGATGGTCCCGCACCACCATCGACCTAAGTTA
* *
33115612 CCGGTAGTGTCTGATGCCCCT
66 CCAGTAGTGTCTGAGGCCCCT
*
33115633 ACACATCCAA-GCACCAAGGTG-TCGATGGTTCTCTG-TGGTCCCGCACTACCATCGACCTAAGT
1 ACACATCCAAGGCACCAAGGTGCT-GATGGTTCTC-GATGGTCCCGCACCACCATCGACCTAAGT
* *
33115695 TACCAGTGGTGT-TCGAGGCCCCC
64 TACCAGTAGTGTCT-GAGGCCCCT
* * *
33115718 GCATAACCAAGGCACCA
1 ACACATCCAAGGCACCA
33115735 CAGTACCAAT
Statistics
Matches: 88, Mismatches: 10, Indels: 8
0.83 0.09 0.08
Matches are distributed among these distances:
84 2 0.02
85 69 0.78
86 17 0.19
ACGTcount: A:0.23, C:0.32, G:0.22, T:0.22
Consensus pattern (86 bp):
ACACATCCAAGGCACCAAGGTGCTGATGGTTCTCGATGGTCCCGCACCACCATCGACCTAAGTTA
CCAGTAGTGTCTGAGGCCCCT
Found at i:33116132 original size:43 final size:42
Alignment explanation
Indices: 33116084--33116233 Score: 97
Period size: 43 Copynumber: 3.5 Consensus size: 42
33116074 TAACAAGATG
*
33116084 TCGATGCTTTCCGATGGTCCCGCATCATCATCGGCCTAAGTTA
1 TCGATGCTTTCCGATGCTCCCGCA-CATCATCGGCCTAAGTTA
* * * * * * *
33116127 TCGATGGTGTT-CAATGCTTCCGCACATCCA-AGGCACCAAGGTG
1 TCGATGCT-TTCCGATGCTCCCGCACAT-CATCGGC-CTAAGTTA
* * * * *
33116170 TCGATGCTTCCCGATGGTCTCACACCATCATCGACCTAAGTTA
1 TCGATGCTTTCCGATGCTCCCGCA-CATCATCGGCCTAAGTTA
* * *
33116213 CCGATGGTGTCCGATGCTCCC
1 TCGATGCTTTCCGATGCTCCC
33116234 ACACTTCCAA
Statistics
Matches: 75, Mismatches: 26, Indels: 12
0.66 0.23 0.11
Matches are distributed among these distances:
42 7 0.09
43 61 0.81
44 7 0.09
ACGTcount: A:0.20, C:0.31, G:0.22, T:0.27
Consensus pattern (42 bp):
TCGATGCTTTCCGATGCTCCCGCACATCATCGGCCTAAGTTA
Found at i:33116155 original size:85 final size:86
Alignment explanation
Indices: 33116012--33116316 Score: 332
Period size: 85 Copynumber: 3.6 Consensus size: 86
33116002 CAAGGTGCCA
* * * *
33116012 ATGGTCCCGCACCACCATCGGCCTAAGTTACTA-ATGGTGTTTGATACCCCCGCACATCC-AGGT
1 ATGGTCCCGCACCATCATCGGCCTAAGTTAC-AGATGGTGTTCGATGCTCCCGCACATCCAAGGT
* *
33116075 AACAAGATGTCGATGCTTTCCG
65 ACCAAGGTGTCGATGCTTTCCG
* * * *
33116097 ATGGTCCCGCATCATCATCGGCCTAAGTTATC-GATGGTGTTCAATGCTTCCGCACATCCAAGGC
1 ATGGTCCCGCACCATCATCGGCCTAAGTTA-CAGATGGTGTTCGATGCTCCCGCACATCCAAGGT
*
33116161 ACCAAGGTGTCGATGCTTCCCG
65 ACCAAGGTGTCGATGCTTTCCG
* * * * * * * *
33116183 ATGGTCTCACACCATCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCACACTTCCAAGATA
1 ATGGTCCCGCACCATCATCGGCCTAAGTTACAGATGGTGTTCGATGCTCCCGCACATCCAAGGTA
33116248 CCAAGGTGTCGATGCTTAT--G
66 CCAAGGTGTCGATGCTT-TCCG
** * * *
33116268 ATAATCCCGCACTAGCATCGGCCTAAGTTACAGATGGTGTCCGATGCTC
1 ATGGTCCCGCACCATCATCGGCCTAAGTTACAGATGGTGTTCGATGCTC
33116317 TCGTACATGT
Statistics
Matches: 184, Mismatches: 31, Indels: 10
0.82 0.14 0.04
Matches are distributed among these distances:
85 92 0.50
86 92 0.50
ACGTcount: A:0.23, C:0.30, G:0.22, T:0.25
Consensus pattern (86 bp):
ATGGTCCCGCACCATCATCGGCCTAAGTTACAGATGGTGTTCGATGCTCCCGCACATCCAAGGTA
CCAAGGTGTCGATGCTTTCCG
Found at i:33116209 original size:86 final size:86
Alignment explanation
Indices: 33116012--33116316 Score: 281
Period size: 86 Copynumber: 3.6 Consensus size: 86
33116002 CAAGGTGCCA
* * * ** *** * *
33116012 ATGGTCCCGCACCACCATCGGCCTAAGTTACTAATGGTGTTTGATACCCCCGCACATCC-AGGTA
1 ATGGTCCCACACCATCATCGACCTAAGTTACCGATGGTGTCCAATGCTCCCGCACATCCAAGGTA
* * *
33116076 ACAAGATGTCGATGCTTTCCG
66 CCAAGGTGTCGATGCTTCCCG
* * * * * * *
33116097 ATGGTCCCGCATCATCATCGGCCTAAGTTATCGATGGTGTTCAATGCTTCCGCACATCCAAGGCA
1 ATGGTCCCACACCATCATCGACCTAAGTTACCGATGGTGTCCAATGCTCCCGCACATCCAAGGTA
33116162 CCAAGGTGTCGATGCTTCCCG
66 CCAAGGTGTCGATGCTTCCCG
* * * * *
33116183 ATGGTCTCACACCATCATCGACCTAAGTTACCGATGGTGTCCGATGCTCCCACACTTCCAAGATA
1 ATGGTCCCACACCATCATCGACCTAAGTTACCGATGGTGTCCAATGCTCCCGCACATCCAAGGTA
**
33116248 CCAAGGTGTCGATGCTT-ATG
66 CCAAGGTGTCGATGCTTCCCG
** * * * * * *
33116268 ATAATCCCGCACTAGCATCGGCCTAAGTTACAGATGGTGTCCGATGCTC
1 ATGGTCCCACACCATCATCGACCTAAGTTACCGATGGTGTCCAATGCTC
33116317 TCGTACATGT
Statistics
Matches: 183, Mismatches: 36, Indels: 2
0.83 0.16 0.01
Matches are distributed among these distances:
85 91 0.50
86 92 0.50
ACGTcount: A:0.23, C:0.30, G:0.22, T:0.25
Consensus pattern (86 bp):
ATGGTCCCACACCATCATCGACCTAAGTTACCGATGGTGTCCAATGCTCCCGCACATCCAAGGTA
CCAAGGTGTCGATGCTTCCCG
Found at i:33117197 original size:85 final size:86
Alignment explanation
Indices: 33116966--33118096 Score: 1037
Period size: 86 Copynumber: 13.2 Consensus size: 86
33116956 CTTTTTTAGC
* * * * ** *
33116966 CCGATGGTGTCCCATACTCCTGTACAAGCAAGGCACCAAGGTGCCGATGCTTCCTGATGGTCCCG
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCCG
* *
33117031 GACCACTATCGGCCTAAGTTA
66 CACCACCATCGGCCTAAGTTA
* * * * * *
33117052 CTGATGGTGTCTGATGCTCTCGCAGATGCAAGGCACCAAGGTGCCGATGCTTCCAGATGGTCCCG
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCCG
33117117 CACCACCATCGGCCTAAGTTA
66 CACCACCATCGGCCTAAGTTA
* ** * * * * *
33117138 -CAATGGTGTCCGATGCTTTCTCACATCCAAGGCACCAAGGTGTCGATACTACCCCATGGT-CCG
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCCG
* * *
33117201 TACTACCATCGACCTAAGTTA
66 CACCACCATCGGCCTAAGTTA
* * * * * * * * * *
33117222 -TGATGGTGTCCGATGCTCCCGCGCATACAAAGAACCAAGGTACCGATGCTTCTCAATGGTCTCA
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCCG
* *
33117286 CACCACCATCGCCCTAACTTA
66 CACCACCATCGGCCTAAGTTA
* * * * * **
33117307 CCGATGGTGTCCGATGCTCCCGCACAAACAAAGGACAACCGATAAGGT-ACGATACTGCCTTATG
1 CCGATGGTGTCCGATGCTCCCGCAC-ATCCAAGG-C-ACC---AAGGTGCCGATGCTTCCCGATG
* * *
33117371 GTACCACACCACCATCGGTCTAAGTTA
60 GTCCCGCACCACCATCGGCCTAAGTTA
* ** * * * *
33117398 CCAATGGTGTCCGATGCTTTCACACATCCAAGACACCAAGGTGCCGATAG-TTCTCGATGGTCTC
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGAT-GCTTCCCGATGGTCCC
*
33117462 GTACCACCATCGGCCTAAGTTA
65 GCACCACCATCGGCCTAAGTTA
* * * ** * * * * * * *
33117484 CCAATGGTGTCTGATCCTCTAGCACATCCAAGGCACCAAGGTACAGATACTGCTCGATAGTCCCA
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCCG
33117549 C-CCACCATCGGCCTAAGTTA
66 CACCACCATCGGCCTAAGTTA
* * * * * * *
33117569 CCGATGGTGTCCAATTTCTCTCGCACATCCAAGGCACGAAGGTGTCGATGGTT-CCGATGGTCTC
1 CCGATGGTGTCCGA-TGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCC
* * *
33117633 ACACCACAATTGGCCTAAGTTA
65 GCACCACCATCGGCCTAAGTTA
* * * * * * *
33117655 TCGATGGTGTCCGATGCTGCCGCACATCTAAGGTACGAAGGTG-CGATGGTTCCCGATGGTCTTC
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTC-CC
33117719 -CACCACCATCGGCCTAAGTTA
65 GCACCACCATCGGCCTAAGTTA
* * * *
33117740 CCGATGGTGTTCGATGCTCCCGCACAT-CATAGGCACCAAGGTGTCGATGCTTTCCAAT-GTCCC
1 CCGATGGTGTCCGATGCTCCCGCACATCCA-AGGCACCAAGGTGCCGATGCTTCCCGATGGTCCC
* *
33117803 GCACCATCATCGGCCTATGTTA
65 GCACCACCATCGGCCTAAGTTA
* * * * * *
33117825 CCGATAGTGTCCGATGCTCTCGCACA-CCAAGGCACCAAGGTGCCAATAGCTTTCCGATAGTCCT
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGAT-GCTTCCCGATGGTCCC
* * *
33117889 ACACCACCATCGACCTATGTTA
65 GCACCACCATCGGCCTAAGTTA
* * * * * *
33117911 CCGATGATGTCCGATGCTCCCGGACATCCAAGGCACTAAGATGCTGATGCTT-CCGATGGTCTCG
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCCG
* *
33117975 CACCACCATCGGCTTAAGTTG
66 CACCACCATCGGCCTAAGTTA
* * * *
33117996 CCAATGGTGTTCGATGCTCCCGTACATCCAAGGCACCAAGGTACCGATGCTTCCCGATGGTCCCG
1 CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCCG
* *
33118061 CACCACCATCGGCCTAAGATG
66 CACCACCATCGGCCTAAGTTA
*
33118082 CCGATGGTGTTCGAT
1 CCGATGGTGTCCGAT
33118097 TGTGTCTGAT
Statistics
Matches: 848, Mismatches: 174, Indels: 46
0.79 0.16 0.04
Matches are distributed among these distances:
84 92 0.11
85 323 0.38
86 342 0.40
87 21 0.02
88 3 0.00
89 4 0.00
90 5 0.01
91 53 0.06
92 5 0.01
ACGTcount: A:0.24, C:0.31, G:0.22, T:0.23
Consensus pattern (86 bp):
CCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCCGATGGTCCCG
CACCACCATCGGCCTAAGTTA
Found at i:33117629 original size:171 final size:170
Alignment explanation
Indices: 33116994--33118096 Score: 1029
Period size: 171 Copynumber: 6.4 Consensus size: 170
33116984 CCTGTACAAG
* * * * ** * *
33116994 CAAGGCACCAAGGTGCCGATGCTTCCTGATGGTCCCGGACCACTATCGGCCTAAGTTACTGATGG
1 CAAGGCACCAAGGT-ACGATACTGCCCGATGGTCCCACACCACCATCGGCCTAAGTTACCGATGG
* * * * *
33117059 TGTCTGATGCTCTCGCAGATGCAAGGCACCAAGGTGCCGATGCTTCCAGATGGTCCCGCACCACC
65 TGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCC-GATGGTCTCGCACCACC
* *
33117124 ATCGGCCTAAGTTA-CAATGGTGTCCGATGCTTTCTCACATC
129 ATCGGCCTAAGTTACCAATGGTGTCCGATGCTCTCGCACATC
* * * ** * * *
33117165 CAAGGCACCAAGGTGTCGATACTACCCCATGGT-CCGTACTACCATCGACCTAAGTTA-TGATGG
1 CAAGGCACCAAGGT-ACGATACTGCCCGATGGTCCCACACCACCATCGGCCTAAGTTACCGATGG
* * * * * * *
33117228 TGTCCGATGCTCCCGCGCATACAAAGAACCAAGGTACCGATGCTTCTCAATGGTCTCACACCACC
65 TGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTC-CGATGGTCTCGCACCACC
* * * * *
33117293 ATCGCCCTAACTTACCGATGGTGTCCGATGCTCCCGCACAAAC
129 ATCGGCCTAAGTTACCAATGGTGTCCGATGCTCTCGCAC-ATC
* ** * * *
33117336 AAAGGACAACCGATAAGGTACGATACTGCCTTATGGTACCACACCACCATCGGTCTAAGTTACCA
1 CAAGG-C-ACC---AAGGTACGATACTGCCCGATGGTCCCACACCACCATCGGCCTAAGTTACCG
** * * *
33117401 ATGGTGTCCGATGCTTTCACACATCCAAGACACCAAGGTGCCGATAG-TTCTCGATGGTCTCGTA
61 ATGGTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGAT-GCTTC-CGATGGTCTCGCA
* * *
33117465 CCACCATCGGCCTAAGTTACCAATGGTGTCTGATCCTCTAGCACATC
124 CCACCATCGGCCTAAGTTACCAATGGTGTCCGATGCTCTCGCACATC
* *
33117512 CAAGGCACCAAGGTACAGATACTGCTCGATAGTCCCAC-CCACCATCGGCCTAAGTTACCGATGG
1 CAAGGCACCAAGGTAC-GATACTGCCCGATGGTCCCACACCACCATCGGCCTAAGTTACCGATGG
* * * * * * * *
33117576 TGTCCAATTTCTCTCGCACATCCAAGGCACGAAGGTGTCGATGGTTCCGATGGTCTCACACCACA
65 TGTCCGA-TGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCGATGGTCTCGCACCACC
* * *
33117641 ATTGGCCTAAGTTATCGATGGTGTCCGATGCTGC-CGCACATC
129 ATCGGCCTAAGTTACCAATGGTGTCCGATGCT-CTCGCACATC
* * * * ** * *
33117683 TAAGGTACGAAGGTGCGATGGTTCCCGATGGTCTTC-CACCACCATCGGCCTAAGTTACCGATGG
1 CAAGGCACCAAGGTACGATACTGCCCGATGGTC-CCACACCACCATCGGCCTAAGTTACCGATGG
* * * * *
33117747 TGTTCGATGCTCCCGCACAT-CATAGGCACCAAGGTGTCGATGCTTTCCAAT-GTCCCGCACCAT
65 TGTCCGATGCTCCCGCACATCCA-AGGCACCAAGGTGCCGATGC-TTCCGATGGTCTCGCACCAC
* * *
33117810 CATCGGCCTATGTTACCGATAGTGTCCGATGCTCTCGCACA-C
128 CATCGGCCTAAGTTACCAATGGTGTCCGATGCTCTCGCACATC
* * ** * * * *
33117852 CAAGGCACCAAGGTGCCAATAGCTTTCCGATAGTCCTACACCACCATCGACCTATGTTACCGATG
1 CAAGGCACCAAGGT-ACGATA-CTGCCCGATGGTCCCACACCACCATCGGCCTAAGTTACCGATG
* * * * *
33117917 ATGTCCGATGCTCCCGGACATCCAAGGCACTAAGATGCTGATGCTTCCGATGGTCTCGCACCACC
64 GTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCGATGGTCTCGCACCACC
* * * * *
33117982 ATCGGCTTAAGTTGCCAATGGTGTTCGATGCTCCCGTACATC
129 ATCGGCCTAAGTTACCAATGGTGTCCGATGCTCTCGCACATC
* * * * *
33118024 CAAGGCACCAAGGTACCGATGCTTCCCGATGGTCCCGCACCACCATCGGCCTAAGATGCCGATGG
1 CAAGGCACCAAGGTA-CGATACTGCCCGATGGTCCCACACCACCATCGGCCTAAGTTACCGATGG
*
33118089 TGTTCGAT
65 TGTCCGAT
33118097 TGTGTCTGAT
Statistics
Matches: 753, Mismatches: 152, Indels: 54
0.79 0.16 0.06
Matches are distributed among these distances:
169 85 0.11
170 135 0.18
171 325 0.43
172 69 0.09
173 3 0.00
174 3 0.00
175 15 0.02
176 30 0.04
177 87 0.12
178 1 0.00
ACGTcount: A:0.24, C:0.31, G:0.22, T:0.23
Consensus pattern (170 bp):
CAAGGCACCAAGGTACGATACTGCCCGATGGTCCCACACCACCATCGGCCTAAGTTACCGATGGT
GTCCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGCTTCCGATGGTCTCGCACCACCAT
CGGCCTAAGTTACCAATGGTGTCCGATGCTCTCGCACATC
Found at i:33117788 original size:43 final size:43
Alignment explanation
Indices: 33117740--33117868 Score: 104
Period size: 42 Copynumber: 3.0 Consensus size: 43
33117730 GCCTAAGTTA
33117740 CCGATGGTGTTCGATGCTCCCGCACATCATAGGCACCAAGGTG
1 CCGATGGTGTTCGATGCTCCCGCACATCATAGGCACCAAGGTG
* * * * * * * *
33117783 TCGATGCT-TTCCAATG-TCCCGCACCATCATCGGC-CTATGTTA
1 CCGATGGTGTT-CGATGCTCCCGCA-CATCATAGGCACCAAGGTG
* * * *
33117825 CCGATAGTGTCCGATGCTCTCGCACACCA-AGGCACCAAGGTG
1 CCGATGGTGTTCGATGCTCCCGCACATCATAGGCACCAAGGTG
33117867 CC
1 CC
33117869 AATAGCTTTC
Statistics
Matches: 61, Mismatches: 20, Indels: 11
0.66 0.22 0.12
Matches are distributed among these distances:
41 3 0.05
42 32 0.52
43 26 0.43
ACGTcount: A:0.21, C:0.33, G:0.23, T:0.22
Consensus pattern (43 bp):
CCGATGGTGTTCGATGCTCCCGCACATCATAGGCACCAAGGTG
Found at i:33118086 original size:43 final size:42
Alignment explanation
Indices: 33117719--33118087 Score: 153
Period size: 43 Copynumber: 8.6 Consensus size: 42
33117709 GATGGTCTTC
* * * *
33117719 CACCACCATCGGCCTAAGTTACCGATGGTGTTCGATGCTCCCG
1 CACCACCATCGGCCTAAGTTGCCGATGCT-TCCGATGGTCCCG
* * * * * *
33117762 CA-CATCATAGGCACCAAGGTGTCGATGCTTTCCAAT-GTCCCG
1 CACCACCATCGGC-CTAAGTTGCCGATGC-TTCCGATGGTCCCG
* * * * *
33117804 CACCATCATCGGCCTATGTTACCGATAG-TGTCCGATGCTCTCG
1 CACCACCATCGGCCTAAGTTGCCGAT-GCT-TCCGATGGTCCCG
* * * * * **
33117847 CA-CACCA-AGGCACCAAGGTGCCAATAGCTTTCCGATAGTCCTA
1 CACCACCATCGGC-CTAAGTTGCCGAT-GC-TTCCGATGGTCCCG
* * * * *
33117890 CACCACCATCGACCTATGTTACCGATGATGTCCGATGCTCCCG
1 CACCACCATCGGCCTAAGTTGCCGATGCT-TCCGATGGTCCCG
* * * * *
33117933 GA-CATCCA-AGGCACTAAGATGCTGATGCTTCCGATGGTCTCG
1 CACCA-CCATCGGC-CTAAGTTGCCGATGCTTCCGATGGTCCCG
* * * * *
33117975 CACCACCATCGGCTTAAGTTGCCAATGGTGTTCGATGCTCCCG
1 CACCACCATCGGCCTAAGTTGCCGATGCT-TCCGATGGTCCCG
* * * * *
33118018 TA-CATCCA-AGGCACCAAGGTACCGATGCTTCCCGATGGTCCCG
1 CACCA-CCATCGGC-CTAAGTTGCCGATGCTT-CCGATGGTCCCG
*
33118061 CACCACCATCGGCCTAAGATGCCGATG
1 CACCACCATCGGCCTAAGTTGCCGATG
33118088 GTGTTCGATT
Statistics
Matches: 226, Mismatches: 78, Indels: 44
0.65 0.22 0.13
Matches are distributed among these distances:
41 4 0.02
42 79 0.35
43 121 0.54
44 20 0.09
45 2 0.01
ACGTcount: A:0.22, C:0.33, G:0.22, T:0.22
Consensus pattern (42 bp):
CACCACCATCGGCCTAAGTTGCCGATGCTTCCGATGGTCCCG
Found at i:33120675 original size:18 final size:17
Alignment explanation
Indices: 33120652--33120694 Score: 50
Period size: 18 Copynumber: 2.5 Consensus size: 17
33120642 TGCTTTTAAG
* *
33120652 TTTAAATTTGTTTTAAAA
1 TTTAAATTTATTCT-AAA
*
33120670 TTTAAAATTATTCTAAA
1 TTTAAATTTATTCTAAA
33120687 TTTAAATT
1 TTTAAATT
33120695 AATAATGTCC
Statistics
Matches: 21, Mismatches: 4, Indels: 1
0.81 0.15 0.04
Matches are distributed among these distances:
17 10 0.48
18 11 0.52
ACGTcount: A:0.42, C:0.02, G:0.02, T:0.53
Consensus pattern (17 bp):
TTTAAATTTATTCTAAA
Found at i:33122456 original size:29 final size:29
Alignment explanation
Indices: 33122335--33122519 Score: 162
Period size: 29 Copynumber: 6.4 Consensus size: 29
33122325 CAGAAATCAT
* * * *
33122335 ATTTTGACCCCT-AATTTTCCAAAATCAC
1 ATTTTTACCCCTGAACTTTCAAAAATTAC
* *
33122363 ATTTTGA-CCCTCGAACTTCCAAAAATTAC
1 ATTTTTACCCCT-GAACTTTCAAAAATTAC
* *
33122392 ATTTTTGCCCCCGAAC-TTCTAAAAATTAC
1 ATTTTTACCCCTGAACTTTC-AAAAATTAC
33122421 ATTTTTACCCCTGAACTTTCAAAAATTAC
1 ATTTTTACCCCTGAACTTTCAAAAATTAC
* * ** *
33122450 ATTTTTA-CCCTAAATTTTCCTCAAATGAC
1 ATTTTTACCCCTGAACTTT-CAAAAATTAC
* *
33122479 ATTTTTACCCCTAAAACTTTCTAAAATTAC
1 ATTTTTACCCCT-GAACTTTCAAAAATTAC
*
33122509 ATTTTAACCCC
1 ATTTTTACCCC
33122520 AAACTCTTTG
Statistics
Matches: 130, Mismatches: 19, Indels: 14
0.80 0.12 0.09
Matches are distributed among these distances:
27 4 0.03
28 18 0.14
29 74 0.57
30 28 0.22
31 6 0.05
ACGTcount: A:0.33, C:0.26, G:0.04, T:0.37
Consensus pattern (29 bp):
ATTTTTACCCCTGAACTTTCAAAAATTAC
Found at i:33124182 original size:17 final size:17
Alignment explanation
Indices: 33124160--33124268 Score: 103
Period size: 17 Copynumber: 6.3 Consensus size: 17
33124150 CCATTTTTTA
*
33124160 AAATTTATTTTAAGGTT
1 AAATTTATTTTAAAGTT
*
33124177 AAATTTATTTTAAATTT
1 AAATTTATTTTAAAGTT
* *
33124194 AAATTTGTTTTAAAATTT
1 AAATTTATTTT-AAAGTT
*
33124212 AAATTTAATTT-AAGTCT
1 AAATTTATTTTAAAGT-T
*
33124229 AAATTTATTTTTAAATTT
1 AAATTTA-TTTTAAAGTT
* * *
33124247 AAAATTATTCTAAATTT
1 AAATTTATTTTAAAGTT
33124264 AAATT
1 AAATT
33124269 AATAATGTCC
Statistics
Matches: 77, Mismatches: 11, Indels: 8
0.80 0.11 0.08
Matches are distributed among these distances:
16 3 0.04
17 46 0.60
18 25 0.32
19 3 0.04
ACGTcount: A:0.41, C:0.02, G:0.04, T:0.53
Consensus pattern (17 bp):
AAATTTATTTTAAAGTT
Found at i:33124194 original size:6 final size:6
Alignment explanation
Indices: 33124175--33124268 Score: 63
Period size: 6 Copynumber: 16.2 Consensus size: 6
33124165 TATTTTAAGG
* **
33124175 TTAAAT TT-ATT TTAAAT TTAAAT TT-GTT TTAAAAT TTAAAT TT-AAT
1 TTAAAT TTAAAT TTAAAT TTAAAT TTAAAT TT-AAAT TTAAAT TTAAAT
* * ** *
33124221 TTAAGT CTAAAT TTATTT TTAAAT TTAAAA TT--AT TCTAAAT TTAAAT
1 TTAAAT TTAAAT TTAAAT TTAAAT TTAAAT TTAAAT T-TAAAT TTAAAT
33124268 T
1 T
33124269 AATAATGTCC
Statistics
Matches: 65, Mismatches: 16, Indels: 14
0.68 0.17 0.15
Matches are distributed among these distances:
4 2 0.03
5 13 0.20
6 44 0.68
7 6 0.09
ACGTcount: A:0.41, C:0.02, G:0.02, T:0.54
Consensus pattern (6 bp):
TTAAAT
Found at i:33124195 original size:35 final size:34
Alignment explanation
Indices: 33124160--33124268 Score: 128
Period size: 35 Copynumber: 3.1 Consensus size: 34
33124150 CCATTTTTTA
**
33124160 AAATTTATTTTAAGGTTAAATTTATTTTAAATTT
1 AAATTTATTTTAAATTTAAATTTATTTTAAATTT
* * * *
33124194 AAATTTGTTTTAAAATTTAAATTTAATTTAAGTCT
1 AAATTTATTTT-AAATTTAAATTTATTTTAAATTT
* *
33124229 AAATTTATTTTTAAATTTAAAATTATTCTAAATTT
1 AAATTTA-TTTTAAATTTAAATTTATTTTAAATTT
33124264 AAATT
1 AAATT
33124269 AATAATGTCC
Statistics
Matches: 61, Mismatches: 12, Indels: 3
0.80 0.16 0.04
Matches are distributed among these distances:
34 10 0.16
35 47 0.77
36 4 0.07
ACGTcount: A:0.41, C:0.02, G:0.04, T:0.53
Consensus pattern (34 bp):
AAATTTATTTTAAATTTAAATTTATTTTAAATTT
Found at i:33124216 original size:52 final size:52
Alignment explanation
Indices: 33124160--33124268 Score: 150
Period size: 52 Copynumber: 2.1 Consensus size: 52
33124150 CCATTTTTTA
* * * *
33124160 AAATTTATTTTAAGGT-TAAATTTA-TTTTAAATTTAAATTTGTTTTAAAATTT
1 AAATTTAATTTAA-GTCTAAATTTATTTTTAAATTTAAAATTATTCT-AAATTT
33124212 AAATTTAATTTAAGTCTAAATTTATTTTTAAATTTAAAATTATTCTAAATTT
1 AAATTTAATTTAAGTCTAAATTTATTTTTAAATTTAAAATTATTCTAAATTT
33124264 AAATT
1 AAATT
33124269 AATAATGTCC
Statistics
Matches: 51, Mismatches: 4, Indels: 4
0.86 0.07 0.07
Matches are distributed among these distances:
51 2 0.04
52 31 0.61
53 18 0.35
ACGTcount: A:0.41, C:0.02, G:0.04, T:0.53
Consensus pattern (52 bp):
AAATTTAATTTAAGTCTAAATTTATTTTTAAATTTAAAATTATTCTAAATTT
Found at i:33124243 original size:12 final size:12
Alignment explanation
Indices: 33124155--33124248 Score: 52
Period size: 12 Copynumber: 8.0 Consensus size: 12
33124145 TAAACCCATT
33124155 TTTTAAAATTT-A
1 TTTT-AAATTTAA
**
33124167 TTTTAAGGTTAA
1 TTTTAAATTTAA
* *
33124179 ATTT-ATTTTAA
1 TTTTAAATTTAA
* *
33124190 ATTTAAATTT-G
1 TTTTAAATTTAA
33124201 TTTTAAAATTTAA
1 TTTT-AAATTTAA
*
33124214 ATTT-AATTTAA
1 TTTTAAATTTAA
* * *
33124225 GTCTAAATTTAT
1 TTTTAAATTTAA
33124237 TTTTAAATTTAA
1 TTTTAAATTTAA
33124249 AATTATTCTA
Statistics
Matches: 61, Mismatches: 16, Indels: 10
0.70 0.18 0.11
Matches are distributed among these distances:
11 25 0.41
12 33 0.54
13 3 0.05
ACGTcount: A:0.39, C:0.01, G:0.04, T:0.55
Consensus pattern (12 bp):
TTTTAAATTTAA
Found at i:33124258 original size:29 final size:29
Alignment explanation
Indices: 33124209--33124264 Score: 78
Period size: 29 Copynumber: 1.9 Consensus size: 29
33124199 TGTTTTAAAA
*
33124209 TTTAAATTTAATTTAAGTCTAAATTTATT
1 TTTAAATTTAAATTAAGTCTAAATTTATT
*
33124238 TTTAAATTTAAAATT-ATTCTAAATTTA
1 TTTAAATTT-AAATTAAGTCTAAATTTA
33124265 AATTAATAAT
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
29 20 0.83
30 4 0.17
ACGTcount: A:0.41, C:0.04, G:0.02, T:0.54
Consensus pattern (29 bp):
TTTAAATTTAAATTAAGTCTAAATTTATT
Found at i:33125994 original size:29 final size:29
Alignment explanation
Indices: 33125936--33126055 Score: 145
Period size: 29 Copynumber: 4.2 Consensus size: 29
33125926 CATAAATCAT
* * * *
33125936 ATTTTGACCC-CTAATTTTCCAAAATCAC
1 ATTTTGACCCTCGAACTTTCAAAAATTAC
33125964 ATTTTGACCCTCGAACTTTCAAAAATTAC
1 ATTTTGACCCTCGAACTTTCAAAAATTAC
* * *
33125993 ATTTTTG-CCCCCAAACTTTTAAAAATTAC
1 A-TTTTGACCCTCGAACTTTCAAAAATTAC
*
33126022 ATTTTTACCCTCGAACTTTCAAAAATTAC
1 ATTTTGACCCTCGAACTTTCAAAAATTAC
33126051 ATTTT
1 ATTTT
33126056 TGCCCCAAAT
Statistics
Matches: 78, Mismatches: 11, Indels: 5
0.83 0.12 0.05
Matches are distributed among these distances:
28 14 0.18
29 59 0.76
30 5 0.06
ACGTcount: A:0.33, C:0.24, G:0.04, T:0.38
Consensus pattern (29 bp):
ATTTTGACCCTCGAACTTTCAAAAATTAC
Found at i:33126056 original size:29 final size:29
Alignment explanation
Indices: 33125951--33126056 Score: 149
Period size: 29 Copynumber: 3.7 Consensus size: 29
33125941 GACCCCTAAT
* * *
33125951 TTTCCAAAATCACATTTTGACCCTCGAAC
1 TTTCAAAAATTACATTTTTACCCTCGAAC
* * *
33125980 TTTCAAAAATTACATTTTTGCCCCCAAAC
1 TTTCAAAAATTACATTTTTACCCTCGAAC
*
33126009 TTTTAAAAATTACATTTTTACCCTCGAAC
1 TTTCAAAAATTACATTTTTACCCTCGAAC
33126038 TTTCAAAAATTACATTTTT
1 TTTCAAAAATTACATTTTT
33126057 GCCCCAAATT
Statistics
Matches: 66, Mismatches: 11, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
29 66 1.00
ACGTcount: A:0.34, C:0.24, G:0.04, T:0.39
Consensus pattern (29 bp):
TTTCAAAAATTACATTTTTACCCTCGAAC
Found at i:33126084 original size:58 final size:57
Alignment explanation
Indices: 33125956--33126125 Score: 196
Period size: 58 Copynumber: 2.9 Consensus size: 57
33125946 CTAATTTTCC
* *
33125956 AAAATCACATTTTGACCCTCGAACTTTCAAAAATTACATTTTTGCCCCCAAACTTTTA
1 AAAATGACATTTTTACCCTCGAACTTTCAAAAATTACATTTTTG-CCCCAAACTTTTA
* * *
33126014 AAAATTACATTTTTACCCTCGAACTTTCAAAAATTACATTTTTGCCCCAAATTTTTGT
1 AAAATGACATTTTTACCCTCGAACTTTCAAAAATTACATTTTTGCCCCAAACTTTT-A
* * ** * * **
33126072 CAAATGATATTTTTACCCCTAAAACTTTCCAAAATTATATTTTAACCCCAAACT
1 AAAATGACATTTTTA-CCCTCGAACTTTCAAAAATTACATTTTTGCCCCAAACT
33126126 CTATGAAACT
Statistics
Matches: 96, Mismatches: 14, Indels: 3
0.85 0.12 0.03
Matches are distributed among these distances:
57 11 0.11
58 54 0.56
59 31 0.32
ACGTcount: A:0.35, C:0.24, G:0.04, T:0.37
Consensus pattern (57 bp):
AAAATGACATTTTTACCCTCGAACTTTCAAAAATTACATTTTTGCCCCAAACTTTTA
Found at i:33126114 original size:30 final size:30
Alignment explanation
Indices: 33125951--33126120 Score: 127
Period size: 29 Copynumber: 5.8 Consensus size: 30
33125941 GACCCCTAAT
* * *
33125951 TTTCCAAAATCACATTTTGA-CCCTCGAAC
1 TTTCCAAAATTACATTTTTACCCCTCAAAC
* *
33125980 TTTCAAAAATTACATTTTTGCCCC-CAAAC
1 TTTCCAAAATTACATTTTTACCCCTCAAAC
** *
33126009 TTTTAAAAATTACATTTTTA-CCCTCGAAC
1 TTTCCAAAATTACATTTTTACCCCTCAAAC
* * *
33126038 TTTCAAAAATTACATTTTT-GCCC-CAAATT
1 TTTCCAAAATTACATTTTTACCCCTCAAA-C
* * * *
33126067 TTTGTC-AAATGATATTTTTACCCCTAAAAC
1 TTT-CCAAAATTACATTTTTACCCCTCAAAC
* *
33126097 TTTCCAAAATTATATTTTAACCCC
1 TTTCCAAAATTACATTTTTACCCC
33126121 AAACTCTATG
Statistics
Matches: 112, Mismatches: 21, Indels: 15
0.76 0.14 0.10
Matches are distributed among these distances:
28 6 0.05
29 78 0.70
30 25 0.22
31 3 0.03
ACGTcount: A:0.34, C:0.24, G:0.04, T:0.38
Consensus pattern (30 bp):
TTTCCAAAATTACATTTTTACCCCTCAAAC
Found at i:33126568 original size:96 final size:98
Alignment explanation
Indices: 33126391--33126584 Score: 293
Period size: 96 Copynumber: 2.0 Consensus size: 98
33126381 AAAATATTTA
* *
33126391 AAATCGAGGGAATATTCCTTTATTTCGAGTTTTGAAAATTCGTGCCCTAACTTACTAGGCGTGAT
1 AAATCGAGGGAATATTCCTTTATCTCGAGTTTTGAAAATTCGTGCCCTAACTTACTAGGCGTGAC
33126456 TTTTCTTCAAACCGGGATAATCGAATAC-CTTT
66 TTTTCTTCAAACCGGGATAATCGAATACTCTTT
* * * * * *
33126488 AAATCGA-GGAATATTTCTTTATCTCGGGTTTTGGAAATTTGTGGCTTAACTTACTAGGCGTGAC
1 AAATCGAGGGAATATTCCTTTATCTCGAGTTTTGAAAATTCGTGCCCTAACTTACTAGGCGTGAC
*
33126552 TTTTCTTCAAATCGGGATAATCGAATACTCTTT
66 TTTTCTTCAAACCGGGATAATCGAATACTCTTT
33126585 TTCAAGGTTT
Statistics
Matches: 87, Mismatches: 9, Indels: 2
0.89 0.09 0.02
Matches are distributed among these distances:
96 76 0.87
97 11 0.13
ACGTcount: A:0.27, C:0.17, G:0.19, T:0.38
Consensus pattern (98 bp):
AAATCGAGGGAATATTCCTTTATCTCGAGTTTTGAAAATTCGTGCCCTAACTTACTAGGCGTGAC
TTTTCTTCAAACCGGGATAATCGAATACTCTTT
Found at i:33138106 original size:39 final size:39
Alignment explanation
Indices: 33138063--33138698 Score: 282
Period size: 39 Copynumber: 16.4 Consensus size: 39
33138053 GAAGATTCTG
*
33138063 ATCTCTTACCCTGAGCTTGGGGCAGATCACCATCAGTCA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTCA
* * * * *
33138102 ATCTCTTACCTCGATCTTGGGGTAAATTACAGCCATC---CG
1 ATCTCTTACCCCGAGCTTGGGGCAGA-T-CA-CCATCAGTCA
* * * *
33138141 ATCTCTTA-CCCGAGCTTGAGGCGGATCATCATCA-ACAA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTC-A
* * ** * * * **
33138179 ATCTCTTACCCCGATCATGGGGCAGATTGCAACCATTTG
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTCA
* * * *
33138218 ATCTCTTACCCTGACCTTAGGGCAGATCACCATCAGCCA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTCA
* * * ** * *
33138257 ATCTCTTA-CCCGATCATGGGGTAGAT-TGCAGTCATTCG
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCA-TCAGTCA
* * *
33138295 ATCTCTTACCCCGAGCTTGGGGCAGATCACCGTTAGCCA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTCA
* * * * * * * *
33138334 ATCTCTTACCCCGATCATGGGGCAAATTA-TAGCCATTCG
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCA-TCAGTCA
* *
33138373 ATCTCTTACCCCGAGCCTGAGGCAGATCACCATCAG-CTA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTC-A
* * * * * *
33138412 ATATCTTACCCCGATCATGGGGCAGATTA-CAGTCATTCG
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCA-TCAGTCA
* * ** * ** *
33138451 ATCTCTTACCCCAAGCCTAAGGCAGACCATAATCAGCCA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTCA
* * * * * *
33138490 ATCTCTTGCCCTGATCATGGGGCAGATTGTAGCCAT---TCG
1 ATCTCTTACCCCGAGCTTGGGGCAGA-T-CA-CCATCAGTCA
* *
33138529 ATCTCTTACCCCGAGCTTGGGGCAGATCACCGTCA-ACAA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTC-A
** * *
33138568 ATCTCTTACCCTAAGCTTCGGGCAGATCACCATC-GACCA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAG-TCA
* * * *
33138607 ATCTCTTACCCCGAGCCTAGGGTAGATTGCAGCCAT---TCG
1 ATCTCTTACCCCGAGCTTGGGGCAGA-T-CA-CCATCAGTCA
* * * * * * *
33138646 ATCTTTTAACCCGAGCCTAGGGCAAATCATCATCAGCCA
1 ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTCA
33138685 ATCTCTTACCCCGA
1 ATCTCTTACCCCGA
33138699 TCATGGGGTA
Statistics
Matches: 427, Mismatches: 139, Indels: 62
0.68 0.22 0.10
Matches are distributed among these distances:
35 4 0.01
36 8 0.02
37 7 0.02
38 50 0.12
39 335 0.78
40 7 0.02
41 5 0.01
42 11 0.03
ACGTcount: A:0.25, C:0.31, G:0.19, T:0.25
Consensus pattern (39 bp):
ATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGTCA
Found at i:33138337 original size:155 final size:155
Alignment explanation
Indices: 33138057--33138578 Score: 652
Period size: 155 Copynumber: 3.4 Consensus size: 155
33138047 CAGATTGAAG
* * * * *
33138057 ATTCTGATCTCTTACCCTGAGCTTGGGGCAGATCACCATCAGTCAATCTCTTACCTCGATCTTGG
1 ATTC-GATCTCTTACCCCGACCTTAGGGCAGATCACCATCAGCCAATCTCTTACC-CGATCATGG
* * * * * *
33138122 GGTAAATTACAGCCATCCGATCTCTTA-CCCGAGCTTGAGGCGGATCATCATCAACAAATCTCTT
64 GGTAGATTACAGTCATTCGATCTCTTACCCCGAGCTTGAGGCAGATCATCATCAGCCAATCTCTT
* *
33138186 ACCCCGATCATGGGGCAGATTGCAACC
129 ACCCCGATCATGGGGCAGATTGTAGCC
* *
33138213 ATTTGATCTCTTACCCTGACCTTAGGGCAGATCACCATCAGCCAATCTCTTACCCGATCATGGGG
1 ATTCGATCTCTTACCCCGACCTTAGGGCAGATCACCATCAGCCAATCTCTTACCCGATCATGGGG
* * * * *
33138278 TAGATTGCAGTCATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCGTTAGCCAATCTCTTAC
66 TAGATTACAGTCATTCGATCTCTTACCCCGAGCTTGAGGCAGATCATCATCAGCCAATCTCTTAC
* *
33138343 CCCGATCATGGGGCAAATTATAGCC
131 CCCGATCATGGGGCAGATTGTAGCC
* * *
33138368 ATTCGATCTCTTACCCCGAGCCTGA-GGCAGATCACCATCAGCTAATATCTTACCCCGATCATGG
1 ATTCGATCTCTTACCCCGA-CCTTAGGGCAGATCACCATCAGCCAATCTCTTA-CCCGATCATGG
* * * * * *
33138432 GGCAGATTACAGTCATTCGATCTCTTACCCCAAGCCTAAGGCAGACCATAATCAGCCAATCTCTT
64 GGTAGATTACAGTCATTCGATCTCTTACCCCGAGCTTGAGGCAGATCATCATCAGCCAATCTCTT
* *
33138497 GCCCTGATCATGGGGCAGATTGTAGCC
129 ACCCCGATCATGGGGCAGATTGTAGCC
* * * * *
33138524 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCGTCAACAAATCTCTTACCC
1 ATTCGATCTCTTACCCCGACCTTAGGGCAGATCACCATCAGCCAATCTCTTACCC
33138579 TAAGCTTCGG
Statistics
Matches: 315, Mismatches: 47, Indels: 9
0.85 0.13 0.02
Matches are distributed among these distances:
154 31 0.10
155 147 0.47
156 137 0.43
ACGTcount: A:0.24, C:0.30, G:0.19, T:0.26
Consensus pattern (155 bp):
ATTCGATCTCTTACCCCGACCTTAGGGCAGATCACCATCAGCCAATCTCTTACCCGATCATGGGG
TAGATTACAGTCATTCGATCTCTTACCCCGAGCTTGAGGCAGATCATCATCAGCCAATCTCTTAC
CCCGATCATGGGGCAGATTGTAGCC
Found at i:33138594 original size:78 final size:78
Alignment explanation
Indices: 33138057--33138578 Score: 625
Period size: 78 Copynumber: 6.7 Consensus size: 78
33138047 CAGATTGAAG
* * * *
33138057 ATTCTGATCTCTTACCCTGAGCTTGGGGCAGATCACCATCAGTCAATCTCTTACCTCGATCTTGG
1 ATTC-GATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGCCAATCTCTTACCCCGATCATGG
* *
33138122 GGTAAATTACAGCC
65 GGCAGATTACAGCC
* * * * * *
33138136 ATCCGATCTCTTA-CCCGAGCTTGAGGCGGATCATCATCAACAAATCTCTTACCCCGATCATGGG
1 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGCCAATCTCTTACCCCGATCATGGG
* *
33138200 GCAGATTGCAACC
66 GCAGATTACAGCC
* * * *
33138213 ATTTGATCTCTTACCCTGACCTTAGGGCAGATCACCATCAGCCAATCTCTTA-CCCGATCATGGG
1 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGCCAATCTCTTACCCCGATCATGGG
* * *
33138277 GTAGATTGCAGTC
66 GCAGATTACAGCC
* *
33138290 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCGTTAGCCAATCTCTTACCCCGATCATGGG
1 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGCCAATCTCTTACCCCGATCATGGG
* *
33138355 GCAAATTATAGCC
66 GCAGATTACAGCC
* * * *
33138368 ATTCGATCTCTTACCCCGAGCCTGAGGCAGATCACCATCAGCTAATATCTTACCCCGATCATGGG
1 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGCCAATCTCTTACCCCGATCATGGG
*
33138433 GCAGATTACAGTC
66 GCAGATTACAGCC
* * ** * ** * *
33138446 ATTCGATCTCTTACCCCAAGCCTAAGGCAGACCATAATCAGCCAATCTCTTGCCCTGATCATGGG
1 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGCCAATCTCTTACCCCGATCATGGG
**
33138511 GCAGATTGTAGCC
66 GCAGATTACAGCC
* * *
33138524 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCGTCAACAAATCTCTTACCC
1 ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGCCAATCTCTTACCC
33138579 TAAGCTTCGG
Statistics
Matches: 371, Mismatches: 70, Indels: 5
0.83 0.16 0.01
Matches are distributed among these distances:
77 130 0.35
78 238 0.64
79 3 0.01
ACGTcount: A:0.24, C:0.30, G:0.19, T:0.26
Consensus pattern (78 bp):
ATTCGATCTCTTACCCCGAGCTTGGGGCAGATCACCATCAGCCAATCTCTTACCCCGATCATGGG
GCAGATTACAGCC
Found at i:33139114 original size:17 final size:17
Alignment explanation
Indices: 33139092--33139138 Score: 76
Period size: 17 Copynumber: 2.8 Consensus size: 17
33139082 CATTTTTTTA
33139092 AAATTTATTTTAAGGTT
1 AAATTTATTTTAAGGTT
*
33139109 AAATTTATTTTAAGTTT
1 AAATTTATTTTAAGGTT
*
33139126 AAATTTGTTTTAA
1 AAATTTATTTTAA
33139139 AATTTAAAAT
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
17 28 1.00
ACGTcount: A:0.36, C:0.00, G:0.09, T:0.55
Consensus pattern (17 bp):
AAATTTATTTTAAGGTT
Found at i:33139160 original size:17 final size:17
Alignment explanation
Indices: 33139088--33139163 Score: 71
Period size: 17 Copynumber: 4.4 Consensus size: 17
33139078 AACCCATTTT
*
33139088 TTTAAAATTTATTTTAAG
1 TTTAAAA-TTATTTTAAA
* * *
33139106 GTTAAATTTATTTTAAG
1 TTTAAAATTATTTTAAA
* *
33139123 TTTAAATTTGTTTTAAAA
1 TTTAAAATTATTTT-AAA
*
33139141 TTTAAAATTATTCTAAA
1 TTTAAAATTATTTTAAA
33139158 TTTAAA
1 TTTAAA
33139164 TTAATAATGT
Statistics
Matches: 49, Mismatches: 8, Indels: 3
0.82 0.13 0.05
Matches are distributed among these distances:
17 31 0.63
18 18 0.37
ACGTcount: A:0.41, C:0.01, G:0.05, T:0.53
Consensus pattern (17 bp):
TTTAAAATTATTTTAAA
Found at i:33141118 original size:30 final size:29
Alignment explanation
Indices: 33140832--33141117 Score: 249
Period size: 29 Copynumber: 9.8 Consensus size: 29
33140822 CCTTACACTT
* * * * *
33140832 TTCC-AAAATCACCTTTTGACCCTCGAAT
1 TTCCAAAAATTACATTTTTACCCTCAAAC
*
33140860 TTCTAAAAATTTACATTTTTACCCTCAAAC
1 TTCCAAAAA-TTACATTTTTACCCTCAAAC
*
33140890 TTATCAAAAATTACATTTTTACCCTCAAAC
1 TT-CCAAAAATTACATTTTTACCCTCAAAC
*
33140920 TTCACAAAAATTAAATTTTTACCC-CTAAAC
1 TTC-CAAAAATTACATTTTTACCCTC-AAAC
* *
33140950 TTCCAAAAATTACATTTTT-CTCTCGAAC
1 TTCCAAAAATTACATTTTTACCCTCAAAC
* * *
33140978 TTCCAAAAATCACATTTTTGCCCTCTAAC
1 TTCCAAAAATTACATTTTTACCCTCAAAC
** * *
33141007 TTTTAAAAATTATATTTTTACCCTCGAAC
1 TTCCAAAAATTACATTTTTACCCTCAAAC
* * *
33141036 TTCAAAAAATTACGTTTTTACCCT-AAATT
1 TTCCAAAAATTACATTTTTACCCTCAAA-C
** * *
33141065 TTCCTCAAATGACATTTTTACCCCTAAAAC
1 TTCCAAAAATTACATTTTTA-CCCTCAAAC
*
33141095 TTTCC-AAAATTACATTTTAACCC
1 -TTCCAAAAATTACATTTTTACCC
33141118 CAAGCTCTTC
Statistics
Matches: 210, Mismatches: 37, Indels: 21
0.78 0.14 0.08
Matches are distributed among these distances:
28 28 0.13
29 89 0.42
30 81 0.39
31 12 0.06
ACGTcount: A:0.35, C:0.25, G:0.02, T:0.37
Consensus pattern (29 bp):
TTCCAAAAATTACATTTTTACCCTCAAAC
Found at i:33151893 original size:13 final size:13
Alignment explanation
Indices: 33151859--33151908 Score: 50
Period size: 14 Copynumber: 3.9 Consensus size: 13
33151849 TATCTTTTTT
*
33151859 TCTTCCTTTTCATC
1 TCTTTCTTTTC-TC
*
33151873 TTTTTCTTTTCTC
1 TCTTTCTTTTCTC
33151886 TCTTTC-TTT-TC
1 TCTTTCTTTTCTC
*
33151897 ACTTTCTTTTCT
1 TCTTTCTTTTCT
33151909 TTTTTCTCTC
Statistics
Matches: 30, Mismatches: 4, Indels: 5
0.77 0.10 0.13
Matches are distributed among these distances:
11 7 0.23
12 6 0.20
13 8 0.27
14 9 0.30
ACGTcount: A:0.04, C:0.28, G:0.00, T:0.68
Consensus pattern (13 bp):
TCTTTCTTTTCTC
Found at i:33151925 original size:23 final size:24
Alignment explanation
Indices: 33151873--33151936 Score: 69
Period size: 23 Copynumber: 2.7 Consensus size: 24
33151863 CCTTTTCATC
* *
33151873 TTTTTCTTTTCTCTCTTTCTTTTCA
1 TTTTTCTTTTCT-TTTTTCTTCTCA
*
33151898 -CTTTCTTTTCTTTTTTC-TCTCA
1 TTTTTCTTTTCTTTTTTCTTCTCA
*
33151920 TTTTTCCTTTCTTTTTT
1 TTTTTCTTTTCTTTTTT
33151937 AAATTTTCTT
Statistics
Matches: 33, Mismatches: 5, Indels: 4
0.79 0.12 0.10
Matches are distributed among these distances:
22 4 0.12
23 19 0.58
24 10 0.30
ACGTcount: A:0.03, C:0.23, G:0.00, T:0.73
Consensus pattern (24 bp):
TTTTTCTTTTCTTTTTTCTTCTCA
Found at i:33151935 original size:29 final size:30
Alignment explanation
Indices: 33151871--33151935 Score: 82
Period size: 29 Copynumber: 2.2 Consensus size: 30
33151861 TTCCTTTTCA
*
33151871 TCTTTTTCTTTTCTCTCTTTCTTTTCACTT
1 TCTTTTTCTTTTCTCTCTATCTTTTCACTT
*
33151901 TC-TTTTCTTTTTTCTCTCAT-TTTTC-CTT
1 TCTTTTTCTTTTCTCTCT-ATCTTTTCACTT
33151929 TCTTTTT
1 TCTTTTT
33151936 TAAATTTTCT
Statistics
Matches: 31, Mismatches: 2, Indels: 5
0.82 0.05 0.13
Matches are distributed among these distances:
28 5 0.16
29 23 0.74
30 3 0.10
ACGTcount: A:0.03, C:0.25, G:0.00, T:0.72
Consensus pattern (30 bp):
TCTTTTTCTTTTCTCTCTATCTTTTCACTT
Found at i:33151954 original size:11 final size:11
Alignment explanation
Indices: 33151871--33151935 Score: 51
Period size: 11 Copynumber: 5.6 Consensus size: 11
33151861 TTCCTTTTCA
33151871 TCTTTTTCTTT
1 TCTTTTTCTTT
33151882 TCTCTCTTTCTTT
1 TCT-T-TTTCTTT
**
33151895 TCACTTTCTTT
1 TCTTTTTCTTT
*
33151906 TCTTTTT-TCTC
1 TCTTTTTCT-TT
*
33151917 TCATTTTTCCTT
1 TC-TTTTTCTTT
33151929 TCTTTTT
1 TCTTTTT
33151936 TAAATTTTCT
Statistics
Matches: 42, Mismatches: 7, Indels: 10
0.71 0.12 0.17
Matches are distributed among these distances:
10 1 0.02
11 23 0.55
12 9 0.21
13 9 0.21
ACGTcount: A:0.03, C:0.25, G:0.00, T:0.72
Consensus pattern (11 bp):
TCTTTTTCTTT
Found at i:33154879 original size:10 final size:10
Alignment explanation
Indices: 33154866--33154895 Score: 51
Period size: 10 Copynumber: 3.0 Consensus size: 10
33154856 AATTAAGTAA
33154866 GGAGCTGAAT
1 GGAGCTGAAT
*
33154876 GGAGCTAAAT
1 GGAGCTGAAT
33154886 GGAGCTGAAT
1 GGAGCTGAAT
33154896 AGACTAGGCT
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
10 18 1.00
ACGTcount: A:0.33, C:0.10, G:0.37, T:0.20
Consensus pattern (10 bp):
GGAGCTGAAT
Found at i:33155537 original size:86 final size:86
Alignment explanation
Indices: 33155384--33155697 Score: 382
Period size: 86 Copynumber: 3.7 Consensus size: 86
33155374 TCAATCGACC
* *
33155384 TAAGTTACCGATGGTGTCCGATGCT-CACGCACATGCAAGGCACCAAGGTATCGATGCTTCCCGA
1 TAAGTTACCGATGGTGTCCGATGCTCCA-GCACATCCAAGGCACCAAGGTACCGATGCTTCCCGA
* *
33155448 TGGTCTCGTACCATCATCCACT
65 TGGTCCCGTACCATCATCAACT
* * * *
33155470 TAAGTTACCGATGGTGTCCGATGCTCCAGCACATCCAAGGCACCAAGGTGCCGAT-ATCGCCCTA
1 TAAGTTACCGATGGTGTCCGATGCTCCAGCACATCCAAGGCACCAAGGTACCGATGCT-TCCCGA
* * *
33155534 TGGTCGCGTACCACCATCGACT
65 TGGTCCCGTACCATCATCAACT
* * *
33155556 TAAGTTACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACTAAGGTACCGATGCTTTCCGAT
1 TAAGTTACCGATGGTGTCCGATGCTCCAGCACATCCAAGGCACCAAGGTACCGATGCTTCCCGAT
33155621 GGTCCCGTACCATCATCAACT
66 GGTCCCGTACCATCATCAACT
* * ** * * * *
33155642 TAAGTTATCGGTGGTGTTTGATGCCCCCA-CACAACCAAGACACCAAGGTGCCGATG
1 TAAGTTACCGATGGTGTCCGATG-CTCCAGCACATCCAAGGCACCAAGGTACCGATG
33155698 TTGTCCAATG
Statistics
Matches: 195, Mismatches: 29, Indels: 8
0.84 0.12 0.03
Matches are distributed among these distances:
85 1 0.01
86 188 0.96
87 6 0.03
ACGTcount: A:0.24, C:0.31, G:0.23, T:0.23
Consensus pattern (86 bp):
TAAGTTACCGATGGTGTCCGATGCTCCAGCACATCCAAGGCACCAAGGTACCGATGCTTCCCGAT
GGTCCCGTACCATCATCAACT
Found at i:33155627 original size:43 final size:43
Alignment explanation
Indices: 33155383--33155627 Score: 151
Period size: 43 Copynumber: 5.7 Consensus size: 43
33155373 ATCAATCGAC
* * *
33155383 CTAAGTTACCGATGGTGTCCGATGCTCACGCACATGCAAGGCA
1 CTAAGGTACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCA
* * * * * * **
33155426 CCAAGGTATCGATGCT-TCCCGATGGTCTCGTACCAT-C-ATCCA
1 CTAAGGTACCGATGGTGT-CCGATGCTCCCGCA-CATCCAAGGCA
* *
33155468 CTTAAGTTACCGATGGTGTCCGATGCTCCAGCACATCCAAGGCA
1 C-TAAGGTACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCA
* * * * * * * * **
33155512 CCAAGGTGCCGAT-ATCGCCCTATGGTCGCGTACCA-CCATCG-A
1 CTAAGGTACCGATGGT-GTCCGATGCTCCCGCA-CATCCAAGGCA
*
33155554 CTTAAGTTACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCA
1 C-TAAGGTACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCA
* * *
33155598 CTAAGGTACCGATGCTTTCCGATGGTCCCG
1 CTAAGGTACCGATGGTGTCCGATGCTCCCG
33155628 TACCATCATC
Statistics
Matches: 144, Mismatches: 46, Indels: 24
0.67 0.21 0.11
Matches are distributed among these distances:
42 13 0.09
43 118 0.82
44 13 0.09
ACGTcount: A:0.22, C:0.31, G:0.23, T:0.23
Consensus pattern (43 bp):
CTAAGGTACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCA
Found at i:33155688 original size:172 final size:172
Alignment explanation
Indices: 33155377--33155696 Score: 489
Period size: 172 Copynumber: 1.9 Consensus size: 172
33155367 GGCCATATCA
* *
33155377 ATCGACCTAAGTTACCGATGGTGTCCGATGCTCACGCACATGCAAGGCACCAAGGTATCGATGCT
1 ATCGACCTAAGTTACCGATGGTGTCCGATGCTCACGCACATCCAAGGCACCAAGGTACCGATGCT
* * * *
33155442 TCCCGATGGTCTCGTACCATCATCCACTTAAGTTACCGATGGTGTCCGATGCTCCAGCACATCCA
66 TCCCGATGGTCCCGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATGCCCCAGCACAACCA
*
33155507 AGGCACCAAGGTGCCGATATCGCCCTATGGTCGCGTACCACC
131 AGACACCAAGGTGCCGATATCGCCCTATGGTCGCGTACCACC
* * *
33155549 ATCGACTTAAGTTACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACTAAGGTACCGATGCT
1 ATCGACCTAAGTTACCGATGGTGTCCGATGCTCACGCACATCCAAGGCACCAAGGTACCGATGCT
* * * **
33155614 TTCCGATGGTCCCGTACCATCATCAACTTAAGTTATCGGTGGTGTTTGATGCCCCCA-CACAACC
66 TCCCGATGGTCCCGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATG-CCCCAGCACAACC
33155678 AAGACACCAAGGTGCCGAT
130 AAGACACCAAGGTGCCGAT
33155697 GTTGTCCAAT
Statistics
Matches: 132, Mismatches: 15, Indels: 2
0.89 0.10 0.01
Matches are distributed among these distances:
172 128 0.97
173 4 0.03
ACGTcount: A:0.24, C:0.31, G:0.22, T:0.23
Consensus pattern (172 bp):
ATCGACCTAAGTTACCGATGGTGTCCGATGCTCACGCACATCCAAGGCACCAAGGTACCGATGCT
TCCCGATGGTCCCGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATGCCCCAGCACAACCA
AGACACCAAGGTGCCGATATCGCCCTATGGTCGCGTACCACC
Found at i:33155739 original size:172 final size:172
Alignment explanation
Indices: 33155389--33155740 Score: 420
Period size: 172 Copynumber: 2.0 Consensus size: 172
33155379 CGACCTAAGT
* * *
33155389 TACCGATGGTGTCCGATGCTCACGCACATGCAAGGCACCAAGGTATCGATGCTTCCCGATGGTCT
1 TACCGATGGTGTCCGATGCTCACGCACATCCAAGGCACCAAGGTACCGATGCTTCCCGATGGTCC
* * * *
33155454 CGTACCATCATCCACTTAAGTTACCGATGGTGTCCGATGCTCCAGCACATCCAAGGCACCAAGGT
66 CGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATGCCCCAGCACAACCAAGACACCAAGGT
* * * * * * * * *
33155519 GCCGATATCGCCCTATGGTCGCGTACCACCATCGACTTAAGT
131 GCCGATATCGCCCAATGCTCCCGCACAAACAGCGACTCAAGC
* * *
33155561 TACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACTAAGGTACCGATGCTTTCCGATGGTCC
1 TACCGATGGTGTCCGATGCTCACGCACATCCAAGGCACCAAGGTACCGATGCTTCCCGATGGTCC
* * **
33155626 CGTACCATCATCAACTTAAGTTATCGGTGGTGTTTGATGCCCCCA-CACAACCAAGACACCAAGG
66 CGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATG-CCCCAGCACAACCAAGACACCAAGG
* * * * *
33155690 TGCCGATGTTGTCCAATGCTCCCGCACAAATAGGGTAC-CAAGC
130 TGCCGATATCGCCCAATGCTCCCGCACAAACAGCG-ACTCAAGC
33155733 TACCGATG
1 TACCGATG
33155741 CTTATTGATG
Statistics
Matches: 150, Mismatches: 28, Indels: 4
0.82 0.15 0.02
Matches are distributed among these distances:
172 144 0.96
173 6 0.04
ACGTcount: A:0.24, C:0.31, G:0.22, T:0.22
Consensus pattern (172 bp):
TACCGATGGTGTCCGATGCTCACGCACATCCAAGGCACCAAGGTACCGATGCTTCCCGATGGTCC
CGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATGCCCCAGCACAACCAAGACACCAAGGT
GCCGATATCGCCCAATGCTCCCGCACAAACAGCGACTCAAGC
Found at i:33155753 original size:172 final size:172
Alignment explanation
Indices: 33155389--33155795 Score: 417
Period size: 172 Copynumber: 2.4 Consensus size: 172
33155379 CGACCTAAGT
* * * * *
33155389 TACCGATGGTGTCCGATGCTCACGCACATGCAAGGCACCAAGGTATCGATGCTTCCCGATGGTCT
1 TACCGATGCTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTACCGATGCTTCCCGATGGTCC
* * * *
33155454 CGTACCATCATCCACTTAAGTTACCGATGGTGTCCGATGCTCCAGCACATCCAAGGCACCAAGGT
66 CGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATGCCCCAGCACAACCAAGACACCAAGGT
* * * * * * * * *
33155519 GCCGATATCGCCCTATGGTCGCGTACCACCATCGACTTAAGT
131 GCCGATATCGCCCAATGCTCCCGCACAAACAGCGACTCAAGC
* * *
33155561 TACCGATGGTGTCCGATGCTCCCGCACATCCAAGGCACTAAGGTACCGATGCTTTCCGATGGTCC
1 TACCGATGCTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTACCGATGCTTCCCGATGGTCC
* * **
33155626 CGTACCATCATCAACTTAAGTTATCGGTGGTGTTTGATGCCCCCA-CACAACCAAGACACCAAGG
66 CGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATG-CCCCAGCACAACCAAGACACCAAGG
* * * * *
33155690 TGCCGATGTTGTCCAATGCTCCCGCACAAATAGGGTAC-CAAGC
130 TGCCGATATCGCCCAATGCTCCCGCACAAACAGCG-ACTCAAGC
** ** * * *
33155733 TACCGATGCT-TATTGATGCTCCTACACATCCAAGGCATCAAGGTGCC-AGTGCTTCTCGATGGT
1 TACCGATGCTGT-CCGATGCTCCCGCACATCCAAGGCACCAAGGTACCGA-TGCTTCCCGATGGT
33155796 TCTGCACAAA
Statistics
Matches: 193, Mismatches: 38, Indels: 8
0.81 0.16 0.03
Matches are distributed among these distances:
171 2 0.01
172 185 0.96
173 6 0.03
ACGTcount: A:0.24, C:0.30, G:0.22, T:0.23
Consensus pattern (172 bp):
TACCGATGCTGTCCGATGCTCCCGCACATCCAAGGCACCAAGGTACCGATGCTTCCCGATGGTCC
CGTACCATCATCAACTTAAGTTACCGATGGTGTCCGATGCCCCAGCACAACCAAGACACCAAGGT
GCCGATATCGCCCAATGCTCCCGCACAAACAGCGACTCAAGC
Found at i:33156011 original size:86 final size:86
Alignment explanation
Indices: 33155879--33156075 Score: 222
Period size: 86 Copynumber: 2.3 Consensus size: 86
33155869 CTATGTAATC
* * * * * *
33155879 GATGGTGTTTGATGCTCCCGCACATCCAAGGCATCAAGGTGCCGATGTTTCCCGATGGT-CTCGC
1 GATGGTGTTCGATGCTTCTGCACATCCAAGGCATCAAGGTGCCGATGCTTCCCAATGATAC-CGC
*
33155943 ACCACCACCGG-CCTAAGTTATT
65 ACCACCA-CGGACCTAAGTTAGT
* *
33155965 GATGGTGTTCGATGCTTCTGCACATCCAAGGCA-CTACA-GTGTCGATGCTTCTCAATGATACCG
1 GATGGTGTTCGATGCTTCTGCACATCCAAGGCATC-A-AGGTGCCGATGCTTCCCAATGATACCG
*
33156028 CACCACCATGGACCTAAGTTAGT
64 CACCACCACGGACCTAAGTTAGT
* *
33156051 AATGGTGTTCGATGCTTTTGCACAT
1 GATGGTGTTCGATGCTTCTGCACAT
33156076 GTCTGAAATA
Statistics
Matches: 95, Mismatches: 12, Indels: 8
0.83 0.10 0.07
Matches are distributed among these distances:
85 3 0.03
86 90 0.95
87 2 0.02
ACGTcount: A:0.22, C:0.27, G:0.23, T:0.28
Consensus pattern (86 bp):
GATGGTGTTCGATGCTTCTGCACATCCAAGGCATCAAGGTGCCGATGCTTCCCAATGATACCGCA
CCACCACGGACCTAAGTTAGT
Found at i:33157062 original size:86 final size:86
Alignment explanation
Indices: 33156917--33157555 Score: 457
Period size: 86 Copynumber: 7.6 Consensus size: 86
33156907 GACGCTACCT
* * * * * * *
33156917 CACCAACATTGGCCTCAGTTATCGATGGTG-CTTAATGCTCCTGCACATCCAAGGCACCAAAGTA
1 CACCACCATCGGCCTAAGTTACCGATGGTGTC-TGATGCTCCCGCACATCCAAGGCACCAAAGTG
*
33156981 CCGATGCTTCTTGATGGTCCCG
65 CCGATGCTTCTCGATGGTCCCG
** * * * *
33157003 CACCACCGGCGGCCTAAGATACTGATGGTGTCTGATGTTCCCGCACATCGAAGGCACC-AA--G-
1 CACCACCATCGGCCTAAGTTACCGATGGTGTCTGATGCTCCCGCACATCCAAGGCACCAAAGTGC
33157064 -G-TG---C-CGATGGTCCCG
66 CGATGCTTCTCGATGGTCCCG
* * * * ** *
33157079 CACCAACATCGACCTAAGTTACCGATGGTGTCCGATGCTCTCGCACATCTGAGGCACCAAGGTGC
1 CACCACCATCGGCCTAAGTTACCGATGGTGTCTGATGCTCCCGCACATCCAAGGCACCAAAGTGC
** * **
33157144 TAATGGTTCTCGATGGTTTCG
66 CGATGCTTCTCGATGGTCCCG
* * *
33157165 CACCATCATTGGCCTAAGTTACCGATGGTGT-TCGATGCTCCCGTACATCCAA-GCA-CAAAGGT
1 CACCACCATCGGCCTAAGTTACCGATGGTGTCT-GATGCTCCCGCACATCCAAGGCACCAAA-GT
* * * *
33157227 GCTGATACTGCCCGATGGTCCCG
64 GCCGATGCTTCTCGATGGTCCCG
* * * * * * * * *
33157250 CACCACCATTGACTTAAGTTATCGATGATGTCTGATTCTCTCGCACATCTAAGGCA-CAAAGGTA
1 CACCACCATCGGCCTAAGTTACCGATGGTGTCTGATGCTCCCGCACATCCAAGGCACCAAA-GTG
*
33157314 CCGATGGC-TCTCGATGGTCCCA
65 CCGAT-GCTTCTCGATGGTCCCG
* * * * * *
33157336 CACCACCATCAGCCTAAGTTACGGATGGTGTCCGATGCTCACGCACATCCAAGGCACCAAGGTGT
1 CACCACCATCGGCCTAAGTTACCGATGGTGTCTGATGCTCCCGCACATCCAAGGCACCAAAGTGC
* * *
33157401 AGATGCTTCCCGATGGTCCCA
66 CGATGCTTCTCGATGGTCCCG
* ** * * * *
33157422 CACCACCATCGGCCTAAGTTACCGATGGTGTCT-AGTGGTCTTGGAAATCCAAGGCACTAAGGTG
1 CACCACCATCGGCCTAAGTTACCGATGGTGTCTGA-TGCTCCCGCACATCCAAGGCACCAAAGTG
* * * *
33157486 CTGATGCTTCCCGATGATCTCG
65 CCGATGCTTCTCGATGGTCCCG
* * * * *** * *
33157508 TATCATCATCGGCTTAAGTTGTTGATGGTGTCTGATGCTTCCACACAT
1 CACCACCATCGGCCTAAGTTACCGATGGTGTCTGATGCTCCCGCACAT
33157556 GTCTGAAATA
Statistics
Matches: 429, Mismatches: 104, Indels: 40
0.75 0.18 0.07
Matches are distributed among these distances:
76 57 0.13
77 2 0.00
79 1 0.00
80 2 0.00
81 1 0.00
82 2 0.00
84 3 0.01
85 68 0.16
86 287 0.67
87 6 0.01
ACGTcount: A:0.23, C:0.29, G:0.23, T:0.25
Consensus pattern (86 bp):
CACCACCATCGGCCTAAGTTACCGATGGTGTCTGATGCTCCCGCACATCCAAGGCACCAAAGTGC
CGATGCTTCTCGATGGTCCCG
Found at i:33157294 original size:171 final size:172
Alignment explanation
Indices: 33157067--33157454 Score: 501
Period size: 171 Copynumber: 2.3 Consensus size: 172
33157057 CACCAAGGTG
* * *
33157067 CCGATGGTCCCGCACCAACATCGACCTAAGTTACCGATGGTGTCCGATGCTCTCGCACATCTGAG
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCTGATGCTCTCGCACATCTAAG
* * * * ** * * ** *
33157132 GCACCAAGGTGCTAATGGTTCTCGATGGTTTCGCACCATCATTGGCCTAAGTTACCGATGGTGTT
66 GCACAAAGGTACCAATGGCTCTCGATGGTCCCACACCACCATCAGCCTAAGTTACCGATGGTGTC
* *
33157197 CGATGCTCCCGTACATCCAA-GCACAAAGGTGCT-GATACTGC
131 CGATGCTCACGCACATCCAAGGCACAAAGGTG-TAGATACTGC
* * * * *
33157238 CCGATGGTCCCGCACCACCATTGACTTAAGTTATCGATGATGTCTGATTCTCTCGCACATCTAAG
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCTGATGCTCTCGCACATCTAAG
* *
33157303 GCACAAAGGTACCGATGGCTCTCGATGGTCCCACACCACCATCAGCCTAAGTTACGGATGGTGTC
66 GCACAAAGGTACCAATGGCTCTCGATGGTCCCACACCACCATCAGCCTAAGTTACCGATGGTGTC
* * *
33157368 CGATGCTCACGCACATCCAAGGCACCAAGGTGTAGATGCTTC
131 CGATGCTCACGCACATCCAAGGCACAAAGGTGTAGATACTGC
* *
33157410 CCGATGGTCCCACACCACCATCGGCCTAAGTTACCGATGGTGTCT
1 CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCT
33157455 AGTGGTCTTG
Statistics
Matches: 183, Mismatches: 32, Indels: 3
0.84 0.15 0.01
Matches are distributed among these distances:
171 128 0.70
172 55 0.30
ACGTcount: A:0.23, C:0.30, G:0.23, T:0.24
Consensus pattern (172 bp):
CCGATGGTCCCGCACCACCATCGACCTAAGTTACCGATGGTGTCTGATGCTCTCGCACATCTAAG
GCACAAAGGTACCAATGGCTCTCGATGGTCCCACACCACCATCAGCCTAAGTTACCGATGGTGTC
CGATGCTCACGCACATCCAAGGCACAAAGGTGTAGATACTGC
Found at i:33157958 original size:14 final size:14
Alignment explanation
Indices: 33157939--33157966 Score: 56
Period size: 14 Copynumber: 2.0 Consensus size: 14
33157929 ATCTAATAAA
33157939 TACATCCCTTCTAG
1 TACATCCCTTCTAG
33157953 TACATCCCTTCTAG
1 TACATCCCTTCTAG
33157967 AAGTTAGGGT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 14 1.00
ACGTcount: A:0.21, C:0.36, G:0.07, T:0.36
Consensus pattern (14 bp):
TACATCCCTTCTAG
Found at i:33163096 original size:86 final size:85
Alignment explanation
Indices: 33162951--33163681 Score: 737
Period size: 86 Copynumber: 8.7 Consensus size: 85
33162941 TTTTTTTAGG
** * * * * *
33162951 CCGATGGTGTCCCATGCTCCCACACATGCAAGGCATCAAGGTGTTGATGCTTCTCGATGGTCCCG
1 CCGATGGTGTCTGATGCTCTCGCACATCCAAGGCACCAAGGTG-CGATGCTTCTCGATGGTCCCG
* *
33163016 AACCACCATCAGCCTAAGTTA
65 CACCACCATCGGCCTAAGTTA
* * *
33163037 CCGATGGTGTCTGATGCTCTCGCACATCCAAAGCACCAAGGTGTCGATGGTTTTCGATGGTCCCG
1 CCGATGGTGTCTGATGCTCTCGCACATCCAAGGCACCAAGGTG-CGATGCTTCTCGATGGTCCCG
* *
33163102 TACCACCATTGGCCTAAGTTA
65 CACCACCATCGGCCTAAGTTA
* * *
33163123 CCGATGGTGTCTGATGCTCCCGCACATCCAAGGCACC--GAT---AT-TTTCT-GATGGTCCCGC
1 CCGATGGTGTCTGATGCTCTCGCACATCCAAGGCACCAAGGTGCGATGCTTCTCGATGGTCCCGC
** *
33163181 ACCACCATCGTTCTATGTTA
66 ACCACCATCGGCCTAAGTTA
* * * *
33163201 CCGATGGTGT-TCGATTCTCTCGAACATCCAAGGCA-CAA----AGATG---CT-GATGGTCCCA
1 CCGATGGTGTCT-GATGCTCTCGCACATCCAAGGCACCAAGGTGCGATGCTTCTCGATGGTCCCG
*
33163256 CATCACCATCGGCCTAAGTTA
65 CACCACCATCGGCCTAAGTTA
* * * * * *
33163277 CCGATCGTGT-TCGATGCTCCCGTACATCCAAGGCACCAAGGTGCTGAGGCTTCCCGATTGTCCC
1 CCGATGGTGTCT-GATGCTCTCGCACATCCAAGGCACCAAGGTGC-GATGCTTCTCGATGGTCCC
* *
33163341 GCACGACCATTGGCCTAAGTTA
64 GCACCACCATCGGCCTAAGTTA
* * * *
33163363 CCGATGGTGTCTGATGCTTTTGCACATCCAAGGCACCAAGGTACCGATGCTTCTCGATGGTCCTG
1 CCGATGGTGTCTGATGCTCTCGCACATCCAAGGCACCAAGGT-GCGATGCTTCTCGATGGTCCCG
* *
33163428 CACCACCACCGACCTAAGTTA
65 CACCACCATCGGCCTAAGTTA
** * * * * * *
33163449 CCGATGGTGTCCAATACTCTCAG-ACATCTAAAGCACCAAGGTGCCGATGGTTCCCGATGGTCCT
1 CCGATGGTGTCTGATGCTCTC-GCACATCCAAGGCACCAAGGTG-CGATGCTTCTCGATGGTCCC
*
33163513 GCACCACCAACGGCCTAAGTTA
64 GCACCACCATCGGCCTAAGTTA
* *
33163535 CCGATGGTGTCTAATGCTCTCGCACATCCAAGGCACCAAGGTATCGATGCTTCTCGATGGTCCCG
1 CCGATGGTGTCTGATGCTCTCGCACATCCAAGGCACCAAGGT-GCGATGCTTCTCGATGGTCCCG
* *
33163600 CACCACCACCAGCCTAAGTTA
65 CACCACCATCGGCCTAAGTTA
* *
33163621 CCGATAGTGTCTGATGCTC-CTGCACATCCAAGGCATCAAGGTGCCGATGCTTCTCGATGGT
1 CCGATGGTGTCTGATGCTCTC-GCACATCCAAGGCACCAAGGTG-CGATGCTTCTCGATGGT
33163682 GTTTGATTAT
Statistics
Matches: 538, Mismatches: 83, Indels: 48
0.80 0.12 0.07
Matches are distributed among these distances:
76 59 0.11
77 5 0.01
78 58 0.11
79 3 0.01
80 2 0.00
82 3 0.01
84 2 0.00
85 3 0.01
86 400 0.74
87 3 0.01
ACGTcount: A:0.22, C:0.31, G:0.23, T:0.24
Consensus pattern (85 bp):
CCGATGGTGTCTGATGCTCTCGCACATCCAAGGCACCAAGGTGCGATGCTTCTCGATGGTCCCGC
ACCACCATCGGCCTAAGTTA
Found at i:33163144 original size:43 final size:43
Alignment explanation
Indices: 33163006--33163144 Score: 113
Period size: 43 Copynumber: 3.2 Consensus size: 43
33162996 GATGCTTCTC
* *
33163006 GATGGTCCCGAACCACCATCAGCCTAAGTTACCGATGGTGTCT
1 GATGCTCCCGAACCACCATAAGCCTAAGTTACCGATGGTGTCT
* * * * ** *
33163049 GATGCTCTCGCA-CATCCA-AAGCACCAAGGTGTCGATGGT-TTT
1 GATGCTCCCGAACCA-CCATAAGC-CTAAGTTACCGATGGTGTCT
* * **
33163091 CGATGGTCCCGTACCACCATTGGCCTAAGTTACCGATGGTGTCT
1 -GATGCTCCCGAACCACCATAAGCCTAAGTTACCGATGGTGTCT
33163135 GATGCTCCCG
1 GATGCTCCCG
33163145 CACATCCAAG
Statistics
Matches: 70, Mismatches: 20, Indels: 12
0.69 0.20 0.12
Matches are distributed among these distances:
42 7 0.10
43 57 0.81
44 6 0.09
ACGTcount: A:0.21, C:0.29, G:0.24, T:0.25
Consensus pattern (43 bp):
GATGCTCCCGAACCACCATAAGCCTAAGTTACCGATGGTGTCT
Found at i:33163280 original size:76 final size:76
Alignment explanation
Indices: 33163092--33163323 Score: 259
Period size: 76 Copynumber: 3.0 Consensus size: 76
33163082 GATGGTTTTC
** * *
33163092 GATGGTCCCGTACCACCATTGGCCTAAGTTACCGATGGTG-TCTGATGCTCCCGCACATCCAAGG
1 GATGGTCCCACACCACCATCGGCCTAAGTTACCGATGGTGTTC-GATGCTCCCGAACATCCAAGG
* ** *
33163156 CACCGATATTTTCT
65 CA-C-AAAGATGCT
* ** * * *
33163170 GATGGTCCCGCACCACCATCGTTCTATGTTACCGATGGTGTTCGATTCTCTCGAACATCCAAGGC
1 GATGGTCCCACACCACCATCGGCCTAAGTTACCGATGGTGTTCGATGCTCCCGAACATCCAAGGC
33163235 ACAAAGATGCT
66 ACAAAGATGCT
* * *
33163246 GATGGTCCCACATCACCATCGGCCTAAGTTACCGATCGTGTTCGATGCTCCCGTACATCCAAGGC
1 GATGGTCCCACACCACCATCGGCCTAAGTTACCGATGGTGTTCGATGCTCCCGAACATCCAAGGC
* *
33163311 ACCAAGGTGCT
66 ACAAAGATGCT
33163322 GA
1 GA
33163324 GGCTTCCCGA
Statistics
Matches: 130, Mismatches: 23, Indels: 4
0.83 0.15 0.03
Matches are distributed among these distances:
76 72 0.55
77 1 0.01
78 55 0.42
79 2 0.02
ACGTcount: A:0.22, C:0.31, G:0.22, T:0.25
Consensus pattern (76 bp):
GATGGTCCCACACCACCATCGGCCTAAGTTACCGATGGTGTTCGATGCTCCCGAACATCCAAGGC
ACAAAGATGCT
Found at i:33163430 original size:43 final size:43
Alignment explanation
Indices: 33163300--33163681 Score: 166
Period size: 43 Copynumber: 8.9 Consensus size: 43
33163290 ATGCTCCCGT
* * * * * *
33163300 ACATCCAAGGCACCAAGGTGCTGAGGCTTCCCGATTGTCCCGC
1 ACATCCAAGGCACCAAGGTACCGATGCTTCTCGATGGTCCTGC
* * * * * **
33163343 ACGA-CCATTGGC-CTAAGTTACCGATGGTGTCT-GATGCTTTTGC
1 AC-ATCCA-AGGCACCAAGGTACCGATGCT-TCTCGATGGTCCTGC
33163386 ACATCCAAGGCACCAAGGTACCGATGCTTCTCGATGGTCCTGC
1 ACATCCAAGGCACCAAGGTACCGATGCTTCTCGATGGTCCTGC
** * * * ** *
33163429 ACCA-CCACCG-ACCTAAGTTACCGATGGTGTC-CAATACTCTCAG-
1 A-CATCCAAGGCACC-AAGGTACCGATGCT-TCTCGATGGTC-CTGC
* * * * *
33163472 ACATCTAAAGCACCAAGGTGCCGATGGTTCCCGATGGTCCTGC
1 ACATCCAAGGCACCAAGGTACCGATGCTTCTCGATGGTCCTGC
* * * * *
33163515 ACCA-CCAACGGC-CTAAGTTACCGATGGTGTCT-AATGCT-CTCGC
1 A-CATCCAA-GGCACCAAGGTACCGATGCT-TCTCGATGGTCCT-GC
* *
33163558 ACATCCAAGGCACCAAGGTATCGATGCTTCTCGATGGTCCCGC
1 ACATCCAAGGCACCAAGGTACCGATGCTTCTCGATGGTCCTGC
* * *
33163601 ACCA-CCACCA-GC-CTAAGTTACCGATAG-TGTCT-GATGCTCCTGC
1 A-CATCCA--AGGCACCAAGGTACCGAT-GCT-TCTCGATGGTCCTGC
* *
33163644 ACATCCAAGGCATCAAGGTGCCGATGCTTCTCGATGGT
1 ACATCCAAGGCACCAAGGTACCGATGCTTCTCGATGGT
33163682 GTTTGATTAT
Statistics
Matches: 245, Mismatches: 62, Indels: 64
0.66 0.17 0.17
Matches are distributed among these distances:
41 1 0.00
42 34 0.14
43 179 0.73
44 30 0.12
45 1 0.00
ACGTcount: A:0.23, C:0.31, G:0.23, T:0.23
Consensus pattern (43 bp):
ACATCCAAGGCACCAAGGTACCGATGCTTCTCGATGGTCCTGC
Found at i:33165638 original size:11 final size:11
Alignment explanation
Indices: 33165622--33165648 Score: 54
Period size: 11 Copynumber: 2.5 Consensus size: 11
33165612 GGATGAAATT
33165622 GATATGCAAGG
1 GATATGCAAGG
33165633 GATATGCAAGG
1 GATATGCAAGG
33165644 GATAT
1 GATAT
33165649 AGTTGGATAG
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 16 1.00
ACGTcount: A:0.37, C:0.07, G:0.33, T:0.22
Consensus pattern (11 bp):
GATATGCAAGG
Found at i:33168849 original size:216 final size:214
Alignment explanation
Indices: 33168505--33169123 Score: 846
Period size: 216 Copynumber: 2.9 Consensus size: 214
33168495 AGAGGAATCG
* * *
33168505 AAGTTATAAAAGAACTCGTAAATGTTTGACAAGTTCGGAAGTTCATCCAAGGACAAAGAGAGATA
1 AAGTTATAAAAGAACTCGTAAATGTTTGACAAGTTC-GAAGTTCGTCCAAGAACAAAGAGAGAAA
* * *
33168570 CAATTCCCACATATAAAAT-TTTTTAATTAAAAGACCAAAAGATT-TTTATAAAATGACAAACTA
65 CAATTCTCACATA-AATATGTTTTTAATTAAAAGACCAAAAG-TTGTTTACAAAATGACAAACTA
* *
33168633 TTTAGACCAAATGATGTGATTTCCCGAGCATGGAAAGTTCAGAAAATTGGTCGAAGGAATGGATC
128 TTTTGACCAAATGATGTGATTTCCCGAGCAT-GAAAGTTCAAAAAATTGGTCGAAGGAATGGATC
*
33168698 ATCTTGAATATTCTCAAGAACCA
192 ATCTTGAATACTCTCAAGAACCA
* * *
33168721 AAGTTATATAAGAACTTGTAAATGTCTGACAAGTTCGAATGTTCGTCCAAGAACAAAGAGAGAAA
1 AAGTTATAAAAGAACTCGTAAATGTTTGACAAGTTCGAA-GTTCGTCCAAGAACAAAGAGAGAAA
* * * * *
33168786 TAATTCTCACATAAGTATGTTTTTAATTCAAAGACCAAAAGTTGTTAACAAAATGAAAAACTATT
65 CAATTCTCACATAAATATGTTTTTAATTAAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* ** * * * *
33168851 TTGACCAAATGATATGATTTTTCGAGAATGAAAGGTTCAAAAAATTGGTTGAAGAAATGGATCGT
130 TTGACCAAATGATGTGATTTCCCGAGCATGAAA-GTTCAAAAAATTGGTCGAAGGAATGGATCAT
* *
33168916 CTTGAATACTCTCAAGAATCG
194 CTTGAATACTCTCAAGAACCA
* * *
33168937 AAGTTATAAAAGAACTCGTAAATATTTGACAAGTTCGAAAGTTCGTTCAAGAACCAAGAGAGAAA
1 AAGTTATAAAAGAACTCGTAAATGTTTGACAAGTTCG-AAGTTCGTCCAAGAACAAAGAGAGAAA
* * *
33169002 CAATTCTCTCGTAAATAAGTTTTTAATTAAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
65 CAATTCTCACATAAATATGTTTTTAATTAAAAGACCAAAAGTTGTTTACAAAATGACAAACTATT
* *
33169067 TTCACCAAATGATGTGATTTCCTGAGCATAGAAAGTTCAAAAAATTGGTCGAAGGAA
130 TTGACCAAATGATGTGATTTCCCGAGCAT-GAAAGTTCAAAAAATTGGTCGAAGGAA
33169124 CGTGATAAGA
Statistics
Matches: 349, Mismatches: 48, Indels: 12
0.85 0.12 0.03
Matches are distributed among these distances:
215 12 0.03
216 331 0.95
217 6 0.02
ACGTcount: A:0.42, C:0.13, G:0.17, T:0.28
Consensus pattern (214 bp):
AAGTTATAAAAGAACTCGTAAATGTTTGACAAGTTCGAAGTTCGTCCAAGAACAAAGAGAGAAAC
AATTCTCACATAAATATGTTTTTAATTAAAAGACCAAAAGTTGTTTACAAAATGACAAACTATTT
TGACCAAATGATGTGATTTCCCGAGCATGAAAGTTCAAAAAATTGGTCGAAGGAATGGATCATCT
TGAATACTCTCAAGAACCA
Found at i:33177065 original size:43 final size:43
Alignment explanation
Indices: 33177012--33177737 Score: 515
Period size: 43 Copynumber: 16.9 Consensus size: 43
33177002 TATTTTTAGC
*
33177012 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATAGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * * * *
33177055 TCGAGGCTCCCGCACATCCAAGGAACCAAGGTGCTGTTGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * *
33177098 CCGAGGCTCCCACACATCCAAGGCACCAAGGTGACGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * *
33177141 CCGATGCTGCCGCACATCCAAGGCACCAAGGAGCCGGTGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * * * *
33177184 CCAATGCTCCCGCACATCCAAGGAACCAAGGAGTCGGTGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * *
33177227 CCGATGCTCCCACACATCCATGGCACCAAGGTGCTAGA-GGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGC-CGATGGTGT
* * * *
33177270 CCGATGCTCCCGTAGATCCAAGGTACCAAGGTGCCGATGATGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* ** * *
33177313 CCGATACTCCTACATATCCAAGGCACCAAGGTACCGATGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * * * * *
33177356 TCAATGCTGCTGCCGTAGATCCAAGGCACCAAGGTG-CTATTGGTGA
1 CCGATGCT-C--CCGCACATCCAAGGCACCAAGGTGCCGA-TGGTGT
* * * * *
33177402 CCGATGCTCTCGTACATCCAGGGTACCAAGGTGCCGGTGGTGT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * * * **
33177445 CCAATGCT---GCA-ACCCAAGGCACCAAGTTACCGATGGTAA
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * * * *
33177484 CCGATGCTCCTGCACATCCAAGGTACAAAGGTGCTGATGGTTT
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * * * * ** *
33177527 CCGATGGTCCCGTACCA-CCATCGGC-CTAAGTTATCGATGATGT
1 CCGATGCTCCCGCA-CATCCA-AGGCACCAAGGTGCCGATGGTGT
* * ***
33177570 CTGATGC-CTCCACACATCCAAGGCACCAAGGTATTGATGGT-T
1 CCGATGCTC-CCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * * ** * * * **
33177612 CTCAATGGTGCCATACCA-CCATCGGC-CTAAGTTATCGATGGTGT
1 C-CGATGCTCCCGCA-CATCCA-AGGCACCAAGGTGCCGATGGTGT
* * * * *
33177656 CTGATGC-CCCTGCACAACCAAGGCACTAAGGTACCGATGTTGT
1 CCGATGCTCCC-GCACATCCAAGGCACCAAGGTGCCGATGGTGT
* * *
33177699 CCGATGCTCCCCCACATCCAAGGCACCATGGAGCCGATG
1 CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATG
33177738 CTTCTCGATG
Statistics
Matches: 528, Mismatches: 130, Indels: 50
0.75 0.18 0.07
Matches are distributed among these distances:
39 27 0.05
40 2 0.00
42 20 0.04
43 429 0.81
44 17 0.03
45 3 0.01
46 30 0.06
ACGTcount: A:0.24, C:0.30, G:0.26, T:0.20
Consensus pattern (43 bp):
CCGATGCTCCCGCACATCCAAGGCACCAAGGTGCCGATGGTGT
Done.