Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold1142
Parameters: 2 7 7 80 10 50 1000
Length:  2595

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--570
76
7.5
76
88
5
760
29
17
18
34
1.94
1--653
76
8.5
76
88
5
759
30
17
18
33
1.94
852--964
29
3.9
29
82
4
156
35
20
4
39
1.73
851--973
58
2.1
59
89
4
187
36
20
4
39
1.72
851--995
58
2.5
57
80
7
148
33
21
5
39
1.76
1321--1401
3
27.3
3
76
14
55
70
0
29
0
0.88
1321--1401
13
6.8
13
72
14
59
70
0
29
0
0.88
1378--1405
13
2.2
13
100
0
56
85
0
14
0
0.59
1517--1571
26
2.1
26
83
6
67
74
10
14
0
1.07
1682--1764
12
7.2
12
75
19
70
84
0
15
0
0.63
1682--1788
31
3.5
31
82
12
116
83
0
16
0
0.65
1694--1781
42
2.1
42
87
12
128
86
0
13
0
0.57
1692--1788
23
4.3
22
82
13
110
84
0
15
0
0.62
1694--1781
1
88.0
1
72
0
68
86
0
13
0
0.57
2275--2595
17
17.6
17
67
19
118
35
14
9
41
1.78
2280--2322
21
2.0
22
91
8
72
44
9
9
37
1.69
2464--2505
21
2.0
21
90
4
66
40
16
7
35
1.76

Tables:   1

The End!