Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: scaffold2827

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 504

Length: 841
ACGTcount: A:0.28, C:0.18, G:0.21, T:0.33


Found at i:432 original size:1 final size:1

Alignment explanation


    Indices: 426--461  Score: 72
    Period size: 1  Copynumber: 36.0  Consensus size: 1

        416 GCTAATGCTC

                                                
        426 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
          1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

        462 AAGTATCAAA


Statistics
Matches: 35,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   1   35  1.00

ACGTcount: A:0.00, C:0.00, G:0.00, T:1.00


Consensus pattern (1 bp):   
T

Done.