Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold645
Parameters: 2 7 7 80 10 50 1000
Length:  13947

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32--76
20
2.3
20
84
3
65
64
0
2
33
1.06
106--161
28
2.0
28
83
10
71
64
3
3
28
1.27
283--456
92
1.9
92
92
2
298
29
11
22
36
1.89
793--864
27
2.4
30
76
13
78
34
0
4
61
1.16
1245--1270
2
13.0
2
100
0
52
50
0
0
50
1.00
2535--2680
78
1.9
78
88
1
222
28
9
17
43
1.81
2623--2814
89
2.1
89
82
2
231
31
7
24
36
1.83
4038--4109
33
2.2
33
85
9
94
83
1
12
2
0.82
4042--4112
21
3.1
23
82
11
83
83
1
11
4
0.86
4038--4109
11
6.5
11
76
12
76
83
1
12
2
0.82
9930--9984
22
2.5
22
100
0
110
47
20
7
25
1.75

Tables:   1

The End!