Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold552
Parameters: 2 7 7 80 10 50 1000
Length:  80969

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16691--16802
23
4.9
23
78
0
125
30
6
26
36
1.81
16691--16802
46
2.4
46
89
0
179
30
6
26
36
1.81
28289--28344
30
1.9
30
86
13
82
16
14
8
60
1.57
29193--29267
14
5.5
13
71
16
53
72
1
21
5
1.13
29201--29253
27
1.9
28
85
11
74
71
0
20
7
1.10
29211--29254
21
2.2
20
84
15
56
75
0
15
9
1.05
33291--33328
19
2.0
20
94
5
69
36
10
34
18
1.85
35553--35577
13
1.9
13
100
0
50
44
16
8
32
1.76
38526--38558
17
1.9
18
88
11
52
42
24
15
18
1.88
47725--47773
10
4.8
10
84
2
62
30
14
26
28
1.95
51567--51899
170
2.0
170
95
0
594
29
21
15
33
1.95
51915--52027
19
6.1
19
75
10
108
30
10
13
45
1.77
60782--60819
20
1.9
19
94
5
67
31
15
28
23
1.96
66477--66521
20
2.2
20
85
14
58
53
13
4
28
1.59
72672--72742
10
7.2
10
70
24
53
29
15
28
26
1.96
72672--72742
20
3.6
20
88
5
101
29
15
28
26
1.96

Tables:   1

The End!