Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold669
Parameters: 2 7 7 80 10 50 1000
Length:  11378

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--37
4
6.5
4
100
0
52
76
0
0
23
0.78
560--671
29
3.8
29
94
2
197
52
0
9
36
1.41
560--671
59
1.9
58
94
1
197
52
0
9
36
1.41
784--1418
66
9.6
65
97
1
1096
38
12
14
33
1.85
2028--2449
211
2.0
211
100
0
844
25
8
12
53
1.67
4294--5089
392
2.0
398
96
3
1462
39
17
20
22
1.92
7323--7391
28
2.5
28
86
9
79
72
5
10
11
1.27
9009--9469
88
5.3
88
89
0
692
28
21
23
26
1.99
9009--9469
175
2.6
175
90
2
701
28
21
23
26
1.99
9598--9782
44
4.2
44
71
4
140
30
23
23
22
1.99
9727--9841
44
2.6
44
81
2
133
26
18
25
29
1.98
11216--11264
25
2.0
25
83
0
62
32
6
6
55
1.49
11312--11377
26
2.5
27
72
18
75
36
3
4
56
1.35

Tables:   1

The End!