Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold568
Parameters: 2 7 7 80 10 50 1000
Length:  40621

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1933--2021
18
4.8
18
81
14
110
44
11
0
43
1.39
1933--2028
39
2.5
38
90
9
144
44
10
0
44
1.38
2276--2305
12
2.5
12
94
0
51
43
10
6
40
1.64
2300--2379
25
3.2
23
75
15
70
42
18
5
33
1.72
9866--9895
3
10.0
3
100
0
60
66
0
33
0
0.92
11028--11061
3
11.7
3
87
6
52
35
0
0
64
0.94
11028--11061
15
2.4
14
95
5
59
35
0
0
64
0.94
12541--12627
44
2.0
44
90
0
138
52
18
14
13
1.74
18029--18084
22
2.5
23
79
2
69
53
1
1
42
1.21
18167--18225
23
2.6
22
91
5
91
47
0
1
50
1.11
18202--18257
16
3.5
16
92
0
94
50
1
5
42
1.35
19015--19092
22
3.2
23
80
12
86
51
2
2
43
1.29
20742--20795
19
2.8
19
88
0
72
37
9
20
33
1.84
23141--23170
15
2.0
15
100
0
60
33
20
0
46
1.51
24737--24861
60
2.1
60
98
1
243
26
16
15
41
1.88
32223--32634
46
9.0
46
88
1
583
30
27
15
26
1.96
35609--36247
46
13.9
46
98
0
1206
28
28
17
26
1.97
37297--37343
21
2.2
21
88
0
67
25
38
10
25
1.88
37902--37972
6
11.7
6
76
8
72
74
1
4
19
1.06

Tables:   1

The End!