Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold597
Parameters: 2 7 7 80 10 50 1000
Length:  59232

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
346--395
27
1.9
26
84
15
68
34
6
0
60
1.21
13175--13466
44
6.6
45
72
10
201
29
20
22
27
1.99
13307--13604
87
3.4
87
69
14
243
28
20
22
28
1.99
13171--13645
175
2.7
175
92
0
765
29
20
22
27
1.99
13268--13516
44
5.7
43
67
13
125
30
19
22
28
1.98
15810--16216
108
3.7
108
88
4
595
28
17
19
33
1.95
15810--16216
219
1.9
218
90
3
658
28
17
19
33
1.95
17620--17658
19
2.1
19
85
4
53
43
10
20
25
1.83
35907--36085
50
3.6
50
87
3
261
25
23
30
20
1.98
46238--47266
207
5.0
205
88
3
1452
37
15
16
31
1.89
51433--51473
18
2.3
18
95
0
73
24
26
24
24
2.00
51842--51912
28
2.6
27
76
12
74
53
1
0
45
1.09
52119--52157
14
2.7
14
88
4
51
33
20
10
35
1.86
53508--53570
28
2.2
29
82
2
74
26
1
4
66
1.20
55153--55182
14
2.2
14
94
5
53
20
13
36
30
1.90
55208--55276
32
2.2
32
94
0
120
47
11
14
26
1.78
58233--58364
58
2.2
59
86
4
176
46
6
19
26
1.75

Tables:   1

The End!