Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: scaffold1324

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2026
ACGTcount: A:0.31, C:0.12, G:0.19, T:0.38


Found at i:10 original size:5 final size:5

Alignment explanation


    Indices: 1--41  Score: 82
    Period size: 5  Copynumber: 8.2  Consensus size: 5

                                                             
          1 TGATA TGATA TGATA TGATA TGATA TGATA TGATA TGATA T
          1 TGATA TGATA TGATA TGATA TGATA TGATA TGATA TGATA T

         42 TTGGTGATGA


Statistics
Matches: 36,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   36  1.00

ACGTcount: A:0.39, C:0.00, G:0.20, T:0.41


Consensus pattern (5 bp):   
TGATA

Done.