Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold387
Parameters: 2 7 7 80 10 50 1000
Length:  361964

Tables:   1   2   

This is table  2  of  2  ( 141 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
266825--266876
26
1.9
27
88
7
79
40
0
9
50
1.35
267549--267584
19
1.9
19
88
5
56
50
0
8
41
1.33
271333--271404
35
2.1
35
86
0
99
30
22
23
23
1.99
273003--273050
25
1.9
25
100
0
96
29
22
25
22
1.99
273005--273096
25
3.7
25
80
8
91
29
25
22
22
1.99
279212--279262
7
7.4
7
82
4
68
41
37
0
21
1.54
285131--285210
42
2.0
40
82
7
99
45
2
3
48
1.33
287810--287872
26
2.4
26
89
0
99
23
11
23
41
1.87
289171--289218
21
2.2
22
88
3
71
22
25
37
14
1.92
289742--289766
13
1.9
13
100
0
50
16
0
20
64
1.30
297771--297813
18
2.4
17
81
11
59
39
16
4
39
1.69
300968--301046
39
2.0
39
92
0
131
27
16
11
44
1.82
305201--305276
37
2.0
38
94
2
136
31
19
6
42
1.77
312915--313024
23
5.0
23
75
6
104
33
21
23
20
1.97
314011--314040
13
2.3
13
94
0
51
0
16
0
83
0.65
323152--323266
25
4.6
26
69
15
73
32
13
20
33
1.92
341702--341764
29
2.1
31
82
5
76
34
6
14
44
1.70
342669--342741
27
2.7
27
87
4
103
19
32
24
23
1.97
344692--344852
62
2.6
62
80
3
198
29
27
19
22
1.98
344788--344889
50
2.1
50
81
1
116
25
26
21
26
2.00
349850--349908
23
2.6
21
80
15
64
16
3
3
76
1.06

Tables:   1   2

The End!