Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold578
Parameters: 2 7 7 80 10 50 1000
Length:  32314

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1058--1223
9
19.3
9
69
13
100
32
1
19
46
1.60
1053--1155
25
4.2
23
79
10
91
33
0
21
43
1.59
1165--1231
18
3.7
18
85
0
98
31
1
13
53
1.49
5085--5483
188
2.1
188
89
0
602
28
23
17
31
1.97
5298--5760
114
4.1
114
79
3
502
26
23
18
32
1.97
10981--11011
14
2.1
15
94
5
55
35
45
0
19
1.51
13672--13704
9
3.9
9
88
11
52
57
0
0
42
0.98
15690--15732
21
2.0
21
95
0
77
41
11
0
46
1.40
26787--26898
59
1.9
59
88
3
172
38
5
3
52
1.42
28922--29130
22
9.1
23
72
8
158
18
3
35
42
1.69

Tables:   1

The End!