Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold583
Parameters: 2 7 7 80 10 50 1000
Length:  68966

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8764--8810
20
2.3
21
79
17
55
27
17
27
27
1.97
10639--10665
14
1.9
14
100
0
54
33
22
14
29
1.94
51825--51859
11
2.8
13
87
12
56
40
8
17
34
1.80
55740--55772
17
2.0
17
88
5
50
33
6
6
54
1.50
56970--57020
17
3.0
17
78
18
61
62
1
15
19
1.41
58019--58072
20
2.7
20
82
0
63
24
20
18
37
1.94
58019--58092
30
2.5
30
86
8
98
21
20
18
39
1.93
58019--58083
20
3.2
20
71
16
53
23
21
16
38
1.93
60203--60240
15
2.4
16
95
4
69
10
10
2
76
1.12
60220--60264
23
2.0
23
90
0
72
11
6
4
77
1.09
60201--60276
15
5.6
14
75
20
56
15
9
2
72
1.21
60200--60241
14
2.9
14
86
10
57
14
11
2
71
1.24
60204--60276
13
5.5
13
79
14
62
13
9
2
73
1.18
60574--60617
22
2.0
22
90
0
70
36
4
34
25
1.76

Tables:   1

The End!