Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold623
Parameters: 2 7 7 80 10 50 1000
Length:  47185

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1937--1990
27
2.0
28
81
3
65
50
12
7
29
1.68
5225--5330
45
2.4
45
90
0
167
25
20
14
39
1.90
13508--13564
30
1.9
29
82
10
71
56
0
26
17
1.41
13524--13647
54
2.3
54
83
2
142
55
3
25
15
1.55
32701--32729
14
2.0
15
93
6
51
34
20
6
37
1.80
34501--34538
20
1.9
20
88
0
58
23
18
31
26
1.97
39607--39665
21
2.9
22
78
16
74
5
22
3
69
1.23
39607--39665
20
2.9
20
75
25
61
5
22
3
69
1.23
39609--39667
18
3.1
19
75
20
52
5
23
3
67
1.26
41708--41745
20
1.9
19
94
5
67
23
28
15
31
1.96
43512--43550
11
3.5
11
83
10
53
76
5
2
15
1.06
43512--43555
23
2.0
22
90
4
70
68
4
6
20
1.31
44278--44360
41
2.0
41
100
0
166
24
21
19
34
1.96
44475--44521
21
2.2
21
88
7
69
68
0
23
8
1.17
44491--44536
21
2.2
21
84
7
58
73
0
17
8
1.07

Tables:   1

The End!