Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold782
Parameters: 2 7 7 80 10 50 1000
Length:  6641

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
774--1001
47
4.9
47
99
0
447
50
0
6
42
1.27
1821--2476
115
5.8
114
93
1
1023
28
26
19
25
1.98
3948--4041
30
3.2
29
86
10
95
34
22
3
40
1.70
3963--4047
30
2.9
31
91
6
133
34
24
3
37
1.73
4681--4747
11
6.1
11
77
16
59
73
1
25
0
0.92
4849--4873
13
1.9
13
100
0
50
80
12
8
0
0.92
4829--4870
16
2.6
16
81
11
50
78
16
4
0
0.91
5671--5726
26
2.2
25
83
3
67
21
10
12
55
1.67
5559--6150
17
31.7
18
70
16
309
29
10
11
47
1.74
5619--5859
79
3.1
79
86
6
287
29
11
11
48
1.73
5790--5841
16
3.0
17
88
8
70
40
7
9
42
1.66
5727--5851
64
2.0
64
85
3
171
34
10
9
45
1.71
5649--5927
79
3.4
83
81
10
238
30
10
11
47
1.73
5929--5984
19
2.8
19
89
5
85
41
7
10
41
1.67
5728--6130
152
2.7
152
93
2
674
31
10
11
46
1.74
6051--6107
27
2.2
25
84
6
69
19
14
14
52
1.74

Tables:   1

The End!