Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold593
Parameters: 2 7 7 80 10 50 1000
Length:  24706

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1071--1256
9
20.6
9
66
19
68
60
4
2
32
1.30
1079--1150
26
2.7
27
79
16
80
59
4
0
36
1.17
1241--1268
7
4.0
7
100
0
56
85
0
0
14
0.59
4839--5035
9
20.8
9
70
19
84
30
1
5
62
1.27
4839--4969
20
6.7
19
69
20
74
29
0
6
62
1.26
4838--4901
30
2.1
30
91
0
101
25
0
9
65
1.22
4837--5034
20
10.4
19
64
22
58
30
1
5
62
1.27
12315--12362
22
2.2
22
100
0
96
54
8
4
33
1.50
18742--18808
22
3.0
23
71
18
61
35
4
2
56
1.35
22421--22471
21
2.4
21
83
6
68
33
5
43
17
1.73

Tables:   1

The End!