Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold606
Parameters: 2 7 7 80 10 50 1000
Length:  20949

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1061--1162
47
2.1
47
90
1
159
44
0
7
47
1.39
1157--1195
19
2.1
19
85
9
53
17
5
0
76
0.96
1658--1695
14
2.7
15
88
12
62
42
31
0
26
1.56
1976--2019
17
2.7
17
89
6
65
43
27
0
29
1.55
2379--2795
114
3.7
114
92
2
680
26
24
20
27
1.99
3094--3152
29
2.0
29
96
0
109
54
0
8
37
1.31
3590--3633
13
3.1
14
83
9
54
54
9
2
34
1.44
3598--3653
22
2.6
22
80
8
53
57
7
5
30
1.48
5161--5193
11
3.0
11
95
0
57
48
0
6
45
1.27
7734--7763
15
2.0
15
93
0
51
46
16
6
30
1.73
10255--10301
18
2.6
18
86
0
58
42
42
2
12
1.55
10329--10371
19
2.3
19
88
8
61
62
11
4
20
1.46
10329--10379
25
2.0
27
84
7
70
60
11
5
21
1.52
10329--10371
13
3.4
13
80
6
52
62
11
4
20
1.46
10403--10478
9
8.4
9
83
0
98
25
11
26
36
1.90
10403--10478
18
4.2
18
94
0
134
25
11
26
36
1.90
13223--13267
23
2.0
22
82
4
54
62
0
2
35
1.08
14598--14685
36
2.5
34
75
12
88
44
5
7
42
1.57
16316--16368
23
2.3
23
87
9
74
47
5
5
41
1.51

Tables:   1

The End!