Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold624
Parameters: 2 7 7 80 10 50 1000
Length:  16271

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1911--1949
20
1.9
19
85
10
51
64
17
0
17
1.30
2462--2512
22
2.5
20
84
9
66
31
23
3
41
1.73
2464--2506
22
2.0
21
90
4
68
25
25
4
44
1.73
2683--2803
37
3.1
40
75
17
128
36
21
16
25
1.94
3661--3747
4
21.2
4
73
13
70
1
26
2
70
1.07
3653--3695
21
2.1
21
86
4
61
0
25
0
74
0.82
3661--3747
25
3.5
24
76
7
86
1
26
2
70
1.07
3663--3714
21
2.5
21
87
0
68
0
25
3
71
1.03
3685--3716
17
1.9
16
93
6
55
0
25
6
68
1.12
3753--3838
38
2.3
38
84
6
104
44
1
2
52
1.21
5776--5861
25
3.4
25
80
6
75
33
23
24
18
1.97
5810--5857
25
1.9
25
91
0
78
33
18
27
20
1.96
6062--6128
25
2.7
25
79
6
66
35
20
23
19
1.95
9153--9984
125
6.7
125
99
0
1612
30
20
22
26
1.98
15892--16013
9
14.4
9
71
13
80
29
4
19
46
1.68
15888--16002
25
5.0
23
72
21
107
29
4
19
46
1.69
15901--15998
41
2.4
41
85
0
142
28
5
19
46
1.71
16013--16062
21
2.4
21
100
0
100
44
4
6
46
1.47
16108--16196
25
2.9
32
68
25
84
31
1
19
48
1.56
16091--16247
9
18.3
9
67
17
84
31
2
19
45
1.64
16108--16221
59
1.9
59
89
3
176
30
1
19
48
1.59
16158--16228
25
2.9
25
85
2
81
29
2
18
49
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16139--16214
34
2.3
34
84
4
102
31
1
19
47
1.58
16142--16240
20
5.1
19
69
27
73
30
2
18
49
1.59

Tables:   1

The End!