Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: scaffold517 Parameters: 2 7 7 80 10 50 1000 Length: 102071

Tables:   1   

This is table  1  of  1  ( 44 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6974--7036
30
2.1
30
85
5
83
42
0
3
53
1.16
6974--7042
29
2.3
30
85
7
88
42
0
2
55
1.15
16906--17016
21
5.3
21
79
8
127
18
24
15
42
1.88
16895--17046
42
3.6
42
90
0
196
17
21
16
45
1.85
19535--19581
24
1.9
25
82
4
60
29
2
19
48
1.60
21322--21436
29
3.9
29
78
10
117
23
30
25
20
1.99
23227--23268
3
14.0
3
89
0
66
30
0
4
64
1.14
31458--31501
21
2.2
20
83
4
52
50
22
9
18
1.75
33372--33398
7
3.9
7
100
0
54
25
0
0
74
0.83
35614--35645
13
2.5
13
94
0
55
46
12
0
40
1.42
44842--44888
21
2.2
20
78
10
58
76
0
8
14
1.01
44855--44897
22
2.0
21
90
4
68
72
0
11
16
1.13
46228--46571
43
8.0
43
67
15
190
29
20
23
25
1.99
46086--46626
130
4.2
130
87
2
775
29
20
22
26
1.98
46086--46765
130
5.2
131
84
6
741
30
20
22
26
1.98
46422--46805
132
2.9
131
78
7
302
30
20
23
25
1.99
46793--47352
44
12.8
44
71
11
260
29
19
25
25
1.98
46794--47352
88
6.4
88
69
12
342
29
19
25
25
1.98
46885--47008
45
2.7
47
75
10
116
31
20
24
23
1.98
49581--49610
14
2.1
14
93
0
51
36
3
10
50
1.53
57651--57691
13
3.1
14
75
10
50
17
14
17
51
1.77
58655--58737
22
3.8
20
70
14
58
32
18
21
27
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58953--59025
18
4.1
18
76
13
78
30
17
21
30
1.97
77107--77263
82
2.0
79
79
12
169
53
8
17
20
1.70
81486--81543
2
30.0
2
82
6
75
53
1
0
44
1.10
82319--82376
22
2.6
22
81
7
64
41
17
5
36
1.72
82900--83278
45
8.6
45
73
10
275
26
22
21
30
1.99
82946--83316
89
4.3
88
73
14
306
27
22
21
29
1.99
83076--83357
84
3.3
84
73
12
284
28
21
19
29
1.98
83036--83409
173
2.2
172
89
1
552
28
21
19
30
1.97
83078--83450
173
2.2
173
88
1
534
28
21
19
30
1.98
83491--84244
88
8.6
88
90
0
1148
19
25
27
27
1.99
83876--84195
44
7.3
44
62
8
139
20
26
28
24
1.99
85465--85491
2
13.5
2
100
0
54
0
48
0
51
1.00
85591--85623
14
2.3
15
89
5
50
27
33
12
27
1.92
90989--91042
19
2.8
19
91
0
90
35
16
9
38
1.81
91738--91775
16
2.4
16
90
0
58
31
0
34
34
1.58
91754--91863
45
2.6
43
80
9
129
33
5
29
31
1.80
91989--92030
15
2.7
16
82
14
52
52
2
0
45
1.13
91998--92039
15
2.9
15
82
10
52
52
0
0
47
1.00
98688--98784
41
2.3
42
87
3
133
58
8
27
5
1.48
100265--100326
11
5.6
11
71
7
54
37
1
1
59
1.17
100187--100465
139
2.0
140
99
0
551
40
1
6
51
1.36
100404--100466
11
5.7
11
72
7
56
38
1
1
58
1.17

Tables:   1   

The End!