Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold551
Parameters: 2 7 7 80 10 50 1000
Length:  65386

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
870--1391
175
3.0
175
93
1
875
28
20
18
32
1.96
925--1387
44
10.5
45
69
12
239
28
19
19
31
1.97
2288--2334
21
2.2
21
88
0
67
25
38
10
25
1.88
3343--3393
16
3.2
16
78
13
61
9
1
7
80
0.98
5448--5496
19
2.5
20
80
6
57
42
12
18
26
1.85
5805--5952
73
2.0
74
97
1
280
29
15
14
40
1.87
9082--9116
12
2.9
12
86
0
52
80
2
5
11
1.00
22757--22782
7
3.7
7
100
0
52
38
0
0
61
0.96
27106--27158
25
2.1
25
85
0
70
20
32
9
37
1.85
27177--27296
25
4.8
25
69
14
70
21
23
19
35
1.96
28513--28537
8
3.1
8
100
0
50
40
0
0
60
0.97
28759--28795
18
2.0
19
89
5
58
24
0
13
62
1.31
28757--28803
18
2.6
19
75
21
55
27
0
10
61
1.29
36354--36464
43
2.6
43
81
11
129
32
28
19
18
1.96
45105--45682
113
5.1
114
73
10
493
33
16
20
30
1.94
45105--45700
227
2.6
225
88
4
851
33
16
20
29
1.94
56396--56484
35
2.5
36
71
10
83
25
23
24
25
2.00
56330--56492
71
2.3
71
81
2
193
23
22
25
27
2.00
62296--62329
17
2.1
17
88
5
52
64
0
0
35
0.94
62732--62800
29
2.4
29
80
4
77
33
2
4
59
1.32
63219--63594
183
2.0
185
98
1
729
38
8
9
43
1.68
64783--64820
19
2.1
19
85
14
53
36
18
2
42
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64814--64869
20
2.8
20
84
15
71
44
28
0
26
1.54

Tables:   1

The End!