Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold734
Parameters: 2 7 7 80 10 50 1000
Length:  8088

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1106--1230
62
2.0
62
92
0
205
38
23
8
29
1.85
3001--3043
22
2.0
22
86
9
61
81
2
13
2
0.89
3875--3915
16
2.7
15
85
7
64
43
21
2
31
1.66
4082--4404
44
7.5
45
74
8
285
25
16
26
31
1.96
4113--4352
125
1.9
125
93
0
408
27
17
26
29
1.97
4113--4404
125
2.3
125
87
4
404
26
16
26
30
1.97
4411--4989
50
11.6
50
67
4
283
31
21
20
26
1.98
4404--4989
100
5.9
99
81
5
635
31
21
21
26
1.98
4410--4992
199
2.9
199
88
1
837
30
21
20
26
1.98
4993--5288
40
7.2
41
82
8
343
34
25
19
20
1.96
4993--5286
82
3.6
82
88
4
391
34
24
19
21
1.96
5010--5288
125
2.3
122
88
3
407
33
25
19
22
1.97
7410--7436
2
13.5
2
100
0
54
48
0
0
51
1.00
7530--7604
31
2.5
29
77
12
80
26
5
2
65
1.27

Tables:   1

The End!