Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold572
Parameters: 2 7 7 80 10 50 1000
Length:  37503

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
963--1037
32
2.3
33
79
9
82
38
2
8
50
1.46
1903--1932
3
10.0
3
92
0
51
36
0
0
63
0.95
7257--7304
4
11.8
4
82
4
60
70
0
4
25
1.04
8019--8056
2
19.0
2
100
0
76
50
0
0
50
1.00
10210--10238
13
2.2
13
100
0
58
48
6
20
24
1.74
12012--12067
25
2.2
25
84
6
69
42
12
8
35
1.74
12021--12074
25
2.2
24
93
3
90
38
11
12
37
1.79
23942--23966
9
2.8
9
100
0
50
40
0
0
60
0.97
24435--24464
11
2.6
11
94
5
51
36
0
0
63
0.95
27339--27378
14
2.5
17
84
15
59
60
5
0
35
1.19
33866--36246
213
11.3
213
82
3
2706
27
16
19
31
1.93

Tables:   1

The End!