Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold533
Parameters: 2 7 7 80 10 50 1000
Length:  86003

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--87
21
4.0
21
73
7
57
36
38
0
25
1.56
262--566
41
7.4
42
91
4
498
30
29
22
17
1.97
7032--7185
56
2.7
55
86
5
202
45
16
7
29
1.76
13142--13183
15
2.8
15
85
7
59
26
4
2
66
1.23
14495--14550
27
2.1
27
82
0
67
50
12
3
33
1.58
15026--15092
18
3.6
18
77
13
73
62
0
2
34
1.10
17864--17935
27
2.5
29
86
8
103
45
5
2
45
1.41
17864--17951
30
3.0
30
85
6
119
44
7
2
45
1.45
18228--18255
13
2.2
13
100
0
56
35
0
7
57
1.26
23252--23301
19
2.6
20
90
6
77
52
8
0
40
1.31
26255--26337
41
2.0
41
95
0
148
43
25
8
22
1.81
29109--29162
25
2.2
25
90
3
83
22
29
16
31
1.96
45989--46021
5
6.6
5
100
0
66
21
0
0
78
0.75
68246--68315
21
3.5
20
75
16
65
14
10
1
74
1.14
68270--68309
17
2.4
17
91
0
62
12
5
2
80
0.98
68232--68322
38
2.5
36
78
16
98
14
7
1
76
1.05
68227--68346
8
14.9
8
68
14
68
15
5
1
76
1.05
68232--68319
17
4.9
17
74
16
54
14
7
1
76
1.07
71427--71559
30
4.4
30
88
0
176
28
25
18
27
1.98
74921--74982
21
2.8
22
85
9
81
56
0
1
41
1.09
75012--75081
24
2.9
24
81
8
63
55
4
2
37
1.34
75027--75107
24
3.4
23
79
17
78
58
6
2
33
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74952--75683
140
5.2
140
99
0
1419
55
5
3
35
1.40
75152--75221
24
2.9
24
81
8
63
55
4
2
37
1.34
75167--75247
24
3.4
23
79
17
78
58
6
2
33
1.36
75292--75361
24
2.9
24
81
8
63
55
4
2
37
1.34
75307--75387
24
3.4
23
79
17
78
58
6
2
33
1.36
75432--75501
24
2.9
24
81
8
63
55
4
2
37
1.34
75447--75527
24
3.4
23
79
17
78
58
6
2
33
1.36
75572--75641
24
2.9
24
81
8
63
55
4
2
37
1.34
75587--75667
24
3.4
23
79
17
78
58
6
2
33
1.36
76054--76126
36
2.1
36
84
5
96
28
10
8
52
1.65
78786--78818
17
1.9
17
88
11
50
39
0
3
57
1.14
78808--78840
10
3.0
11
86
13
50
27
0
0
72
0.85
79293--79379
22
3.7
22
89
10
129
32
0
13
54
1.40
79298--79426
47
2.7
48
83
10
165
31
0
13
53
1.46
79475--79512
19
2.0
19
89
0
58
36
5
7
50
1.54
79732--79808
27
2.9
28
90
3
115
19
38
24
16
1.92

Tables:   1

The End!