Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Chr4
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 30015117
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.32
Warning! 1306243 characters in sequence are not A, C, G, or T
File 43 of 85
Found at i:14682141 original size:74 final size:73
Alignment explanation
Indices: 14681964--14682209 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14681954 CTGGGCATTA
** * * * *
14681964 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682029 TTTTTTTT
66 TTTTTTTT
* *
14682037 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682102 TTTTTTTTT
66 -TTTTTTTT
* * * *
14682111 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682175 -TTTTTTT
66 TTTTTTTT
* *
14682182 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14682210 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14682249 original size:186 final size:187
Alignment explanation
Indices: 14682037--14682397 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14682027 AGTTTTTTTT
*
14682037 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14682102 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14682166 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14682223 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14682288 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14682353 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14682398 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14682400 original size:74 final size:73
Alignment explanation
Indices: 14682223--14682468 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14682213 CTGGGCATTA
** * * * *
14682223 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682288 TTTTTTTT
66 TTTTTTTT
* *
14682296 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682361 TTTTTTTTT
66 -TTTTTTTT
* * * *
14682370 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682434 -TTTTTTT
66 TTTTTTTT
* *
14682441 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14682469 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14682508 original size:186 final size:187
Alignment explanation
Indices: 14682296--14682656 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14682286 AGTTTTTTTT
*
14682296 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14682361 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14682425 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14682482 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14682547 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14682612 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14682657 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14682659 original size:74 final size:73
Alignment explanation
Indices: 14682482--14682727 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14682472 CTGGGCATTA
** * * * *
14682482 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682547 TTTTTTTT
66 TTTTTTTT
* *
14682555 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682620 TTTTTTTTT
66 -TTTTTTTT
* * * *
14682629 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682693 -TTTTTTT
66 TTTTTTTT
* *
14682700 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14682728 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14682767 original size:186 final size:187
Alignment explanation
Indices: 14682555--14682915 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14682545 AGTTTTTTTT
*
14682555 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14682620 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14682684 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14682741 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14682806 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14682871 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14682916 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14682918 original size:74 final size:73
Alignment explanation
Indices: 14682741--14682986 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14682731 CTGGGCATTA
** * * * *
14682741 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682806 TTTTTTTT
66 TTTTTTTT
* *
14682814 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682879 TTTTTTTTT
66 -TTTTTTTT
* * * *
14682888 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14682952 -TTTTTTT
66 TTTTTTTT
* *
14682959 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14682987 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14683026 original size:186 final size:187
Alignment explanation
Indices: 14682814--14683174 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14682804 AGTTTTTTTT
*
14682814 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14682879 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14682943 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14683000 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14683065 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14683130 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14683175 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14683177 original size:74 final size:73
Alignment explanation
Indices: 14683000--14683245 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14682990 CTGGGCATTA
** * * * *
14683000 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683065 TTTTTTTT
66 TTTTTTTT
* *
14683073 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683138 TTTTTTTTT
66 -TTTTTTTT
* * * *
14683147 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683211 -TTTTTTT
66 TTTTTTTT
* *
14683218 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14683246 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14683285 original size:186 final size:187
Alignment explanation
Indices: 14683073--14683433 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14683063 AGTTTTTTTT
*
14683073 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14683138 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14683202 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14683259 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14683324 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14683389 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14683434 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14683436 original size:74 final size:73
Alignment explanation
Indices: 14683259--14683504 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14683249 CTGGGCATTA
** * * * *
14683259 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683324 TTTTTTTT
66 TTTTTTTT
* *
14683332 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683397 TTTTTTTTT
66 -TTTTTTTT
* * * *
14683406 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683470 -TTTTTTT
66 TTTTTTTT
* *
14683477 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14683505 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14683544 original size:186 final size:187
Alignment explanation
Indices: 14683332--14683692 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14683322 AGTTTTTTTT
*
14683332 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14683397 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14683461 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14683518 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14683583 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14683648 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14683693 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14683695 original size:74 final size:73
Alignment explanation
Indices: 14683518--14683763 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14683508 CTGGGCATTA
** * * * *
14683518 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683583 TTTTTTTT
66 TTTTTTTT
* *
14683591 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683656 TTTTTTTTT
66 -TTTTTTTT
* * * *
14683665 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683729 -TTTTTTT
66 TTTTTTTT
* *
14683736 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14683764 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14683803 original size:186 final size:187
Alignment explanation
Indices: 14683591--14683951 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14683581 AGTTTTTTTT
*
14683591 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14683656 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14683720 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14683777 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14683842 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14683907 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14683952 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14683954 original size:74 final size:73
Alignment explanation
Indices: 14683777--14684022 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14683767 CTGGGCATTA
** * * * *
14683777 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683842 TTTTTTTT
66 TTTTTTTT
* *
14683850 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683915 TTTTTTTTT
66 -TTTTTTTT
* * * *
14683924 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14683988 -TTTTTTT
66 TTTTTTTT
* *
14683995 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14684023 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14684062 original size:186 final size:187
Alignment explanation
Indices: 14683850--14684210 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14683840 AGTTTTTTTT
*
14683850 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14683915 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14683979 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14684036 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14684101 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14684166 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14684211 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14684213 original size:74 final size:73
Alignment explanation
Indices: 14684036--14684281 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14684026 CTGGGCATTA
** * * * *
14684036 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684101 TTTTTTTT
66 TTTTTTTT
* *
14684109 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684174 TTTTTTTTT
66 -TTTTTTTT
* * * *
14684183 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684247 -TTTTTTT
66 TTTTTTTT
* *
14684254 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14684282 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14684321 original size:186 final size:187
Alignment explanation
Indices: 14684109--14684469 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14684099 AGTTTTTTTT
*
14684109 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14684174 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14684238 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14684295 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14684360 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14684425 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14684470 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14684472 original size:74 final size:73
Alignment explanation
Indices: 14684295--14684540 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14684285 CTGGGCATTA
** * * * *
14684295 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684360 TTTTTTTT
66 TTTTTTTT
* *
14684368 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684433 TTTTTTTTT
66 -TTTTTTTT
* * * *
14684442 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684506 -TTTTTTT
66 TTTTTTTT
* *
14684513 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14684541 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14684580 original size:186 final size:187
Alignment explanation
Indices: 14684368--14684728 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14684358 AGTTTTTTTT
*
14684368 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14684433 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14684497 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14684554 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14684619 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14684684 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14684729 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14684731 original size:74 final size:73
Alignment explanation
Indices: 14684554--14684799 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14684544 CTGGGCATTA
** * * * *
14684554 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684619 TTTTTTTT
66 TTTTTTTT
* *
14684627 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684692 TTTTTTTTT
66 -TTTTTTTT
* * * *
14684701 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684765 -TTTTTTT
66 TTTTTTTT
* *
14684772 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14684800 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14684839 original size:186 final size:187
Alignment explanation
Indices: 14684627--14684987 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14684617 AGTTTTTTTT
*
14684627 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14684692 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14684756 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14684813 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14684878 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14684943 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14684988 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14684990 original size:74 final size:73
Alignment explanation
Indices: 14684813--14685058 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14684803 CTGGGCATTA
** * * * *
14684813 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684878 TTTTTTTT
66 TTTTTTTT
* *
14684886 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14684951 TTTTTTTTT
66 -TTTTTTTT
* * * *
14684960 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685024 -TTTTTTT
66 TTTTTTTT
* *
14685031 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14685059 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14685098 original size:186 final size:187
Alignment explanation
Indices: 14684886--14685246 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14684876 AGTTTTTTTT
*
14684886 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14684951 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14685015 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14685072 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14685137 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14685202 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14685247 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14685249 original size:74 final size:73
Alignment explanation
Indices: 14685072--14685317 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14685062 CTGGGCATTA
** * * * *
14685072 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685137 TTTTTTTT
66 TTTTTTTT
* *
14685145 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685210 TTTTTTTTT
66 -TTTTTTTT
* * * *
14685219 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685283 -TTTTTTT
66 TTTTTTTT
* *
14685290 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14685318 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14685357 original size:186 final size:187
Alignment explanation
Indices: 14685145--14685505 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14685135 AGTTTTTTTT
*
14685145 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14685210 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14685274 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14685331 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14685396 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14685461 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14685506 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14685508 original size:74 final size:73
Alignment explanation
Indices: 14685331--14685576 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14685321 CTGGGCATTA
** * * * *
14685331 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685396 TTTTTTTT
66 TTTTTTTT
* *
14685404 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685469 TTTTTTTTT
66 -TTTTTTTT
* * * *
14685478 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685542 -TTTTTTT
66 TTTTTTTT
* *
14685549 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14685577 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14685616 original size:186 final size:187
Alignment explanation
Indices: 14685404--14685764 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14685394 AGTTTTTTTT
*
14685404 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14685469 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14685533 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14685590 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14685655 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14685720 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14685765 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14685767 original size:74 final size:73
Alignment explanation
Indices: 14685590--14685835 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14685580 CTGGGCATTA
** * * * *
14685590 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685655 TTTTTTTT
66 TTTTTTTT
* *
14685663 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685728 TTTTTTTTT
66 -TTTTTTTT
* * * *
14685737 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685801 -TTTTTTT
66 TTTTTTTT
* *
14685808 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14685836 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14685875 original size:186 final size:187
Alignment explanation
Indices: 14685663--14686023 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14685653 AGTTTTTTTT
*
14685663 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14685728 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14685792 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14685849 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14685914 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14685979 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14686024 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14686026 original size:74 final size:73
Alignment explanation
Indices: 14685849--14686094 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14685839 CTGGGCATTA
** * * * *
14685849 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685914 TTTTTTTT
66 TTTTTTTT
* *
14685922 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14685987 TTTTTTTTT
66 -TTTTTTTT
* * * *
14685996 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686060 -TTTTTTT
66 TTTTTTTT
* *
14686067 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14686095 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14686134 original size:186 final size:187
Alignment explanation
Indices: 14685922--14686282 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14685912 AGTTTTTTTT
*
14685922 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14685987 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14686051 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14686108 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14686173 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14686238 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14686283 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14686285 original size:74 final size:73
Alignment explanation
Indices: 14686108--14686353 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14686098 CTGGGCATTA
** * * * *
14686108 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686173 TTTTTTTT
66 TTTTTTTT
* *
14686181 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686246 TTTTTTTTT
66 -TTTTTTTT
* * * *
14686255 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686319 -TTTTTTT
66 TTTTTTTT
* *
14686326 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14686354 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14686393 original size:186 final size:187
Alignment explanation
Indices: 14686181--14686541 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14686171 AGTTTTTTTT
*
14686181 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14686246 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14686310 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14686367 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14686432 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14686497 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14686542 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14686544 original size:74 final size:73
Alignment explanation
Indices: 14686367--14686612 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14686357 CTGGGCATTA
** * * * *
14686367 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686432 TTTTTTTT
66 TTTTTTTT
* *
14686440 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686505 TTTTTTTTT
66 -TTTTTTTT
* * * *
14686514 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686578 -TTTTTTT
66 TTTTTTTT
* *
14686585 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14686613 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14686652 original size:186 final size:187
Alignment explanation
Indices: 14686440--14686800 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14686430 AGTTTTTTTT
*
14686440 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14686505 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14686569 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14686626 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14686691 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14686756 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14686801 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14686803 original size:74 final size:73
Alignment explanation
Indices: 14686626--14686871 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14686616 CTGGGCATTA
** * * * *
14686626 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686691 TTTTTTTT
66 TTTTTTTT
* *
14686699 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686764 TTTTTTTTT
66 -TTTTTTTT
* * * *
14686773 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686837 -TTTTTTT
66 TTTTTTTT
* *
14686844 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14686872 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14686911 original size:186 final size:187
Alignment explanation
Indices: 14686699--14687059 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14686689 AGTTTTTTTT
*
14686699 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14686764 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14686828 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14686885 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14686950 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14687015 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14687060 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14687062 original size:74 final size:73
Alignment explanation
Indices: 14686885--14687130 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14686875 CTGGGCATTA
** * * * *
14686885 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14686950 TTTTTTTT
66 TTTTTTTT
* *
14686958 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687023 TTTTTTTTT
66 -TTTTTTTT
* * * *
14687032 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687096 -TTTTTTT
66 TTTTTTTT
* *
14687103 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14687131 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14687170 original size:186 final size:187
Alignment explanation
Indices: 14686958--14687318 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14686948 AGTTTTTTTT
*
14686958 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14687023 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14687087 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14687144 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14687209 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14687274 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14687319 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14687321 original size:74 final size:73
Alignment explanation
Indices: 14687144--14687389 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14687134 CTGGGCATTA
** * * * *
14687144 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687209 TTTTTTTT
66 TTTTTTTT
* *
14687217 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687282 TTTTTTTTT
66 -TTTTTTTT
* * * *
14687291 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687355 -TTTTTTT
66 TTTTTTTT
* *
14687362 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14687390 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14687429 original size:186 final size:187
Alignment explanation
Indices: 14687217--14687577 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14687207 AGTTTTTTTT
*
14687217 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14687282 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14687346 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14687403 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14687468 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14687533 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14687578 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14687580 original size:74 final size:73
Alignment explanation
Indices: 14687403--14687648 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14687393 CTGGGCATTA
** * * * *
14687403 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687468 TTTTTTTT
66 TTTTTTTT
* *
14687476 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687541 TTTTTTTTT
66 -TTTTTTTT
* * * *
14687550 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687614 -TTTTTTT
66 TTTTTTTT
* *
14687621 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14687649 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14687688 original size:186 final size:187
Alignment explanation
Indices: 14687476--14687836 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14687466 AGTTTTTTTT
*
14687476 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14687541 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14687605 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14687662 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14687727 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14687792 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14687837 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14687839 original size:74 final size:73
Alignment explanation
Indices: 14687662--14687907 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14687652 CTGGGCATTA
** * * * *
14687662 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687727 TTTTTTTT
66 TTTTTTTT
* *
14687735 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687800 TTTTTTTTT
66 -TTTTTTTT
* * * *
14687809 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687873 -TTTTTTT
66 TTTTTTTT
* *
14687880 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14687908 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14687947 original size:186 final size:187
Alignment explanation
Indices: 14687735--14688095 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14687725 AGTTTTTTTT
*
14687735 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14687800 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14687864 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14687921 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14687986 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14688051 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14688096 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14688098 original size:74 final size:73
Alignment explanation
Indices: 14687921--14688166 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14687911 CTGGGCATTA
** * * * *
14687921 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14687986 TTTTTTTT
66 TTTTTTTT
* *
14687994 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688059 TTTTTTTTT
66 -TTTTTTTT
* * * *
14688068 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688132 -TTTTTTT
66 TTTTTTTT
* *
14688139 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14688167 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14688206 original size:186 final size:187
Alignment explanation
Indices: 14687994--14688354 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14687984 AGTTTTTTTT
*
14687994 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14688059 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14688123 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14688180 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14688245 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14688310 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14688355 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14688357 original size:74 final size:73
Alignment explanation
Indices: 14688180--14688425 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14688170 CTGGGCATTA
** * * * *
14688180 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688245 TTTTTTTT
66 TTTTTTTT
* *
14688253 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688318 TTTTTTTTT
66 -TTTTTTTT
* * * *
14688327 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688391 -TTTTTTT
66 TTTTTTTT
* *
14688398 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14688426 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14688465 original size:186 final size:187
Alignment explanation
Indices: 14688253--14688613 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14688243 AGTTTTTTTT
*
14688253 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14688318 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14688382 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14688439 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14688504 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14688569 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14688614 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14688616 original size:74 final size:73
Alignment explanation
Indices: 14688439--14688684 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14688429 CTGGGCATTA
** * * * *
14688439 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688504 TTTTTTTT
66 TTTTTTTT
* *
14688512 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688577 TTTTTTTTT
66 -TTTTTTTT
* * * *
14688586 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688650 -TTTTTTT
66 TTTTTTTT
* *
14688657 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14688685 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14688724 original size:186 final size:187
Alignment explanation
Indices: 14688512--14688872 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14688502 AGTTTTTTTT
*
14688512 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14688577 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14688641 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14688698 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14688763 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14688828 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14688873 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14688875 original size:74 final size:73
Alignment explanation
Indices: 14688698--14688943 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14688688 CTGGGCATTA
** * * * *
14688698 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688763 TTTTTTTT
66 TTTTTTTT
* *
14688771 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688836 TTTTTTTTT
66 -TTTTTTTT
* * * *
14688845 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14688909 -TTTTTTT
66 TTTTTTTT
* *
14688916 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14688944 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14688983 original size:186 final size:187
Alignment explanation
Indices: 14688771--14689131 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14688761 AGTTTTTTTT
*
14688771 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14688836 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14688900 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14688957 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14689022 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14689087 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14689132 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14689134 original size:74 final size:73
Alignment explanation
Indices: 14688957--14689202 Score: 343
Period size: 73 Copynumber: 3.4 Consensus size: 73
14688947 CTGGGCATTA
** * * * *
14688957 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14689022 TTTTTTTT
66 TTTTTTTT
* *
14689030 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14689095 TTTTTTTTT
66 -TTTTTTTT
* * * *
14689104 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGTTGGGCATAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
14689168 -TTTTTTT
66 TTTTTTTT
* *
14689175 GCGGCGCTTTTCCAAAAACGCCACTAAA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAA
14689203 GCCCTGGGCA
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
71 32 0.21
73 76 0.49
74 47 0.30
ACGTcount: A:0.26, C:0.27, G:0.20, T:0.26
Consensus pattern (73 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
TTTTTTTT
Found at i:14689242 original size:186 final size:187
Alignment explanation
Indices: 14689030--14689390 Score: 537
Period size: 186 Copynumber: 1.9 Consensus size: 187
14689020 AGTTTTTTTT
*
14689030 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* * *
14689095 TTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCAG-AAACAGCGCCGT
66 -TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGT
* *
14689159 TGGGCATAG-TTTTTTTGCGGCGCTTTTCCAAAAACGCCACTAAAGCCCTGGGCATTA
130 TGGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
** * ** * *
14689216 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
* *
14689281 TTTTTTTTGCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTT
66 TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
* *
14689346 GGGCTTAGTTTTTTTTTGCGGAGCTTTCCCAAAAACGCCTCTAAA
131 GGGCATAG-TTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAA
14689391 TCCCCGAAAG
Statistics
Matches: 155, Mismatches: 17, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
185 47 0.30
186 76 0.49
188 32 0.21
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.25
Consensus pattern (187 bp):
GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTGCGGAGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACAGCGCCGTT
GGGCATAGTTTTTTTTGCGGAGCTTTCCCAAAAACGCCACTAAAGCCCTGGGCATTA
Found at i:14689335 original size:73 final size:74
Alignment explanation
Indices: 14689216--14689404 Score: 281
Period size: 73 Copynumber: 2.6 Consensus size: 74
14689206 CTGGGCATTA
** * * *
14689216 GCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGAAATCTTAGAAAACGGCACCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
14689281 -TTTTTTTT
66 TTTTTTTTT
* * *
14689289 GCGGCGCTTTCCCAAAAACACCGCTAAATCCCCAAAAGCTCAGAAAACGGCGCCGTTGGGCTTAG
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
14689354 TTTTTTTTT
66 TTTTTTTTT
* *
14689363 GCGGAGCTTTCCCAAAAACGCCTCTAAATCCCCGAAAGCTCA
1 GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCA
14689405 ATCCCTGAGC
Statistics
Matches: 103, Mismatches: 12, Indels: 1
0.89 0.10 0.01
Matches are distributed among these distances:
73 57 0.55
74 46 0.45
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.26
Consensus pattern (74 bp):
GCGGCGCTTTCCCAAAAACGCCGCTAAATCCCCGAAAGCTCAGAAAACGGCACCGTTGGGCTTAG
TTTTTTTTT
Found at i:14689473 original size:41 final size:41
Alignment explanation
Indices: 14689418--14689784 Score: 511
Period size: 41 Copynumber: 9.0 Consensus size: 41
14689408 CCTGAGCATT
* *
14689418 ATTAGCGGCGCTTTCTCAAAAACGCCGCTAAAGGCCTGGGC
1 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
** *
14689459 ATTAGCGGCGCTTTCCCAAAAACGCAACTAAAGCCATGGGC
1 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
* * * *
14689500 ATTAGCGGCGCTTTACCAAAAACGTCACTAAAGCCATGGGC
1 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
* * *
14689541 ATTAGCGACGCTTT-CCAACAAATGCCGCTAAAGCCCTGGGA
1 ATTAGCGGCGCTTTCCCAA-AAACGCCGCTAAAGCCCTGGGC
14689582 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
1 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
*
14689623 ATTAGCAGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
1 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
* *
14689664 ATTAGCGGCGCTTCCCCAAAAACGCAGCTAAAGCCCTGGGC
1 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
* * * **
14689705 ATTAGCGGCACTTCCCCAAAAATGCCGCTAAAGCCCTAAGC
1 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
** *
14689746 ATTAGCGGCGCTTTCTTAAAAACGCCGCTAAATCCCTGG
1 ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGG
14689785 AAGCTCACAA
Statistics
Matches: 290, Mismatches: 34, Indels: 4
0.88 0.10 0.01
Matches are distributed among these distances:
40 4 0.01
41 282 0.97
42 4 0.01
ACGTcount: A:0.28, C:0.31, G:0.22, T:0.19
Consensus pattern (41 bp):
ATTAGCGGCGCTTTCCCAAAAACGCCGCTAAAGCCCTGGGC
Found at i:14689935 original size:12 final size:12
Alignment explanation
Indices: 14689918--14689943 Score: 52
Period size: 12 Copynumber: 2.2 Consensus size: 12
14689908 TTTTTTATCC
14689918 AAATGCCGCTAA
1 AAATGCCGCTAA
14689930 AAATGCCGCTAA
1 AAATGCCGCTAA
14689942 AA
1 AA
14689944 GCCTGTTTTG
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 14 1.00
ACGTcount: A:0.46, C:0.23, G:0.15, T:0.15
Consensus pattern (12 bp):
AAATGCCGCTAA
Found at i:14695498 original size:27 final size:27
Alignment explanation
Indices: 14695465--14695586 Score: 174
Period size: 27 Copynumber: 4.6 Consensus size: 27
14695455 ATGAAAGAAA
14695465 AGCCTTTGTGGCGAAATATAAAAGAGT
1 AGCCTTTGTGGCGAAATATAAAAGAGT
*
14695492 AGTCTTTGTGGCGAAATATAAAAGAGT
1 AGCCTTTGTGGCGAAATATAAAAGAGT
* ** *
14695519 AGTCTTTGTGGAAAAATATGAAAGAGT
1 AGCCTTTGTGGCGAAATATAAAAGAGT
*
14695546 AGCCTTTGTGGCGAAATATGAAAGA-T
1 AGCCTTTGTGGCGAAATATAAAAGAGT
*
14695572 AGCCTTTATGGCGAA
1 AGCCTTTGTGGCGAA
14695587 CCCTACAAGG
Statistics
Matches: 87, Mismatches: 8, Indels: 1
0.91 0.08 0.01
Matches are distributed among these distances:
26 15 0.17
27 72 0.83
ACGTcount: A:0.36, C:0.10, G:0.26, T:0.28
Consensus pattern (27 bp):
AGCCTTTGTGGCGAAATATAAAAGAGT
Found at i:14708867 original size:18 final size:18
Alignment explanation
Indices: 14708844--14708879 Score: 63
Period size: 18 Copynumber: 2.0 Consensus size: 18
14708834 CTTACCGTAA
*
14708844 GAGTTAGAAATGGTTCAC
1 GAGTTAGAAAAGGTTCAC
14708862 GAGTTAGAAAAGGTTCAC
1 GAGTTAGAAAAGGTTCAC
14708880 AATGTATTCC
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.36, C:0.11, G:0.28, T:0.25
Consensus pattern (18 bp):
GAGTTAGAAAAGGTTCAC
Found at i:14710487 original size:6 final size:6
Alignment explanation
Indices: 14710476--14710501 Score: 52
Period size: 6 Copynumber: 4.3 Consensus size: 6
14710466 GCAACAATGT
14710476 AAAGGA AAAGGA AAAGGA AAAGGA AA
1 AAAGGA AAAGGA AAAGGA AAAGGA AA
14710502 GGTTATATGT
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 20 1.00
ACGTcount: A:0.69, C:0.00, G:0.31, T:0.00
Consensus pattern (6 bp):
AAAGGA
Found at i:14712538 original size:27 final size:27
Alignment explanation
Indices: 14712508--14712566 Score: 73
Period size: 27 Copynumber: 2.1 Consensus size: 27
14712498 ACACTCAAAA
* *
14712508 TTTTCAAAAGCAGTTTTCTAAAACACTT
1 TTTTCAAAA-CACTTTTCAAAAACACTT
* *
14712536 TTTTCACAACTCTTTTCAAAAACACTT
1 TTTTCAAAACACTTTTCAAAAACACTT
14712563 TTTT
1 TTTT
14712567 AACTTCAATG
Statistics
Matches: 27, Mismatches: 4, Indels: 1
0.84 0.12 0.03
Matches are distributed among these distances:
27 19 0.70
28 8 0.30
ACGTcount: A:0.32, C:0.20, G:0.03, T:0.44
Consensus pattern (27 bp):
TTTTCAAAACACTTTTCAAAAACACTT
Found at i:14725861 original size:27 final size:26
Alignment explanation
Indices: 14725823--14725877 Score: 74
Period size: 27 Copynumber: 2.1 Consensus size: 26
14725813 GTAAATTTGG
* *
14725823 AGGGTTTTAGTTTAGCCACAAAAACTA
1 AGGGTTCTAGTTAAGCCACAAAAA-TA
*
14725850 AGGGTTCTAGTTAAGCCATAAAAATA
1 AGGGTTCTAGTTAAGCCACAAAAATA
14725876 AG
1 AG
14725878 TGGGAAGGTA
Statistics
Matches: 25, Mismatches: 3, Indels: 1
0.86 0.10 0.03
Matches are distributed among these distances:
26 4 0.16
27 21 0.84
ACGTcount: A:0.40, C:0.13, G:0.20, T:0.27
Consensus pattern (26 bp):
AGGGTTCTAGTTAAGCCACAAAAATA
Found at i:14731477 original size:28 final size:27
Alignment explanation
Indices: 14731445--14731508 Score: 85
Period size: 28 Copynumber: 2.4 Consensus size: 27
14731435 AAGAACATAC
14731445 TAAAAACATGTAATAGACTAAGACAAAT
1 TAAAAACATGTAATAG-CTAAGACAAAT
* * *
14731473 TAAAAACATGTACTAGCTATGACATAT
1 TAAAAACATGTAATAGCTAAGACAAAT
14731500 T-AAAACATG
1 TAAAAACATG
14731509 CATTAAAAAT
Statistics
Matches: 33, Mismatches: 3, Indels: 2
0.87 0.08 0.05
Matches are distributed among these distances:
26 8 0.24
27 10 0.30
28 15 0.45
ACGTcount: A:0.52, C:0.12, G:0.11, T:0.25
Consensus pattern (27 bp):
TAAAAACATGTAATAGCTAAGACAAAT
Found at i:14733464 original size:18 final size:17
Alignment explanation
Indices: 14733443--14733500 Score: 66
Period size: 18 Copynumber: 3.4 Consensus size: 17
14733433 GCTCTCAATC
14733443 TCTTTTTCTTTTTTGATT
1 TCTTTTTCTTTTTT-ATT
* *
14733461 TCTTTTTCTTTCATT-TC
1 TCTTTTTCTTT-TTTATT
14733478 TCTTTTTC-TTTTTATT
1 TCTTTTTCTTTTTTATT
14733494 TCTTTTT
1 TCTTTTT
14733501 GACTCATTCT
Statistics
Matches: 34, Mismatches: 4, Indels: 6
0.77 0.09 0.14
Matches are distributed among these distances:
15 2 0.06
16 10 0.29
17 9 0.26
18 11 0.32
19 2 0.06
ACGTcount: A:0.05, C:0.16, G:0.02, T:0.78
Consensus pattern (17 bp):
TCTTTTTCTTTTTTATT
Found at i:14733508 original size:33 final size:35
Alignment explanation
Indices: 14733441--14733508 Score: 95
Period size: 33 Copynumber: 2.0 Consensus size: 35
14733431 TTGCTCTCAA
**
14733441 TCTCTTTTTCTTTTTTGATTTCTTTTTCTTTCATT
1 TCTCTTTTTCTTTTTTGATTTCTTTTTCACTCATT
*
14733476 TCTCTTTTTC-TTTTT-ATTTCTTTTTGACTCATT
1 TCTCTTTTTCTTTTTTGATTTCTTTTTCACTCATT
14733509 CTTTCATTAC
Statistics
Matches: 30, Mismatches: 3, Indels: 2
0.86 0.09 0.06
Matches are distributed among these distances:
33 15 0.50
34 5 0.17
35 10 0.33
ACGTcount: A:0.07, C:0.18, G:0.03, T:0.72
Consensus pattern (35 bp):
TCTCTTTTTCTTTTTTGATTTCTTTTTCACTCATT
Found at i:14734537 original size:24 final size:24
Alignment explanation
Indices: 14734477--14734537 Score: 70
Period size: 23 Copynumber: 2.5 Consensus size: 24
14734467 ATGTATACTT
**
14734477 TTTTTTTGTTCACGATTTTTTTAAA
1 TTTTTTTG-TCAAAATTTTTTTAAA
* *
14734502 TTTTTTT-CCAAAATTTTTTTGAA
1 TTTTTTTGTCAAAATTTTTTTAAA
14734525 TTTTTTTGTCAAA
1 TTTTTTTGTCAAA
14734538 TACTTACTCC
Statistics
Matches: 30, Mismatches: 5, Indels: 3
0.79 0.13 0.08
Matches are distributed among these distances:
23 19 0.63
24 4 0.13
25 7 0.23
ACGTcount: A:0.23, C:0.08, G:0.07, T:0.62
Consensus pattern (24 bp):
TTTTTTTGTCAAAATTTTTTTAAA
Found at i:14735886 original size:28 final size:28
Alignment explanation
Indices: 14735854--14735919 Score: 132
Period size: 28 Copynumber: 2.4 Consensus size: 28
14735844 AAGAACATAC
14735854 TAAAAACATGTAATAGACTAAGACAAAT
1 TAAAAACATGTAATAGACTAAGACAAAT
14735882 TAAAAACATGTAATAGACTAAGACAAAT
1 TAAAAACATGTAATAGACTAAGACAAAT
14735910 TAAAAACATG
1 TAAAAACATG
14735920 CATTAAAAAT
Statistics
Matches: 38, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
28 38 1.00
ACGTcount: A:0.58, C:0.11, G:0.11, T:0.21
Consensus pattern (28 bp):
TAAAAACATGTAATAGACTAAGACAAAT
Found at i:14737058 original size:137 final size:138
Alignment explanation
Indices: 14736808--14737065 Score: 333
Period size: 137 Copynumber: 1.9 Consensus size: 138
14736798 GCTATAAGAT
** *
14736808 GGTCTGCTCACACAAGCTAATTATCGGAATGTAAACTACACAATGCTGCTCGCACAAGCTGATGA
1 GGTCTGCTCACACAAGCTAACGATCGGAATGTAAACTACACAATGCTGCTCACACAAGCTGATGA
* * * * *
14736873 GTATCTGTAACTAATGTCGAATCTCAGCCATCAGTAGGACATTTAGGACCAGCACCCAAAACATG
66 GTATCCGCAACAAATGTCGAAACTCAGCCATCAGTAGGACATTCAGGACCAGCACCCAAAACATG
14736938 GCAACCTG
131 GCAACCTG
* * * * *
14736946 GGTCTGCTCACACGAGCTGACGGTCGGAATGT-AGCTACACGATG-TCGCTCACACAAGCTGATG
1 GGTCTGCTCACACAAGCTAACGATCGGAATGTAAACTACACAATGCT-GCTCACACAAGCTGATG
* * *
14737009 AGTATCCGCAACAAATG-CTGAAACTTAGCCATCTGTAGGACATTCAGGACTAGCACC
65 AGTATCCGCAACAAATGTC-GAAACTCAGCCATCAGTAGGACATTCAGGACCAGCACC
14737066 TGAAATAAGG
Statistics
Matches: 102, Mismatches: 16, Indels: 5
0.83 0.13 0.04
Matches are distributed among these distances:
136 2 0.02
137 73 0.72
138 27 0.26
ACGTcount: A:0.31, C:0.26, G:0.22, T:0.22
Consensus pattern (138 bp):
GGTCTGCTCACACAAGCTAACGATCGGAATGTAAACTACACAATGCTGCTCACACAAGCTGATGA
GTATCCGCAACAAATGTCGAAACTCAGCCATCAGTAGGACATTCAGGACCAGCACCCAAAACATG
GCAACCTG
Found at i:14739484 original size:17 final size:17
Alignment explanation
Indices: 14739454--14739498 Score: 56
Period size: 17 Copynumber: 2.6 Consensus size: 17
14739444 TACAAAGCTG
* *
14739454 AATAGTTTTGTTGTTGAA
1 AATATTTTTTTTG-TGAA
14739472 AAT-TTTTTTTTGTGAA
1 AATATTTTTTTTGTGAA
14739488 AATATTTTTTT
1 AATATTTTTTT
14739499 AAAATTTGTT
Statistics
Matches: 24, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
16 7 0.29
17 14 0.58
18 3 0.12
ACGTcount: A:0.27, C:0.00, G:0.13, T:0.60
Consensus pattern (17 bp):
AATATTTTTTTTGTGAA
Found at i:14742194 original size:27 final size:27
Alignment explanation
Indices: 14742164--14742365 Score: 230
Period size: 27 Copynumber: 7.5 Consensus size: 27
14742154 TATACCCTAA
*
14742164 TAGGGTAAAATGACCGTAATATCCCTG
1 TAGGGTAAAATGACCGTAATACCCCTG
* *
14742191 TAGGGTTAAATGACCGTAATACCCCTA
1 TAGGGTAAAATGACCGTAATACCCCTG
14742218 TAGGGTAAAAT-AGCCGTAATACCCCTG
1 TAGGGTAAAATGA-CCGTAATACCCCTG
* *
14742245 TAGGGTGAAATGACCGTAATAACCCTG
1 TAGGGTAAAATGACCGTAATACCCCTG
* * *
14742272 TAAGGTAAAATGACTGTAATGCCCCTG
1 TAGGGTAAAATGACCGTAATACCCCTG
* * *
14742299 TAGGGTAAAATGCCCATAATA-CCCTCA
1 TAGGGTAAAATGACCGTAATACCCCT-G
* * *
14742326 TAGGGTTAAATGACCGTAATGCCCTTG
1 TAGGGTAAAATGACCGTAATACCCCTG
*
14742353 GAGGGT-AAATGAC
1 TAGGGTAAAATGAC
14742366 TATTTTGCCC
Statistics
Matches: 146, Mismatches: 25, Indels: 9
0.81 0.14 0.05
Matches are distributed among these distances:
26 12 0.08
27 130 0.89
28 4 0.03
ACGTcount: A:0.33, C:0.20, G:0.23, T:0.24
Consensus pattern (27 bp):
TAGGGTAAAATGACCGTAATACCCCTG
Found at i:14742545 original size:27 final size:27
Alignment explanation
Indices: 14742489--14742547 Score: 75
Period size: 27 Copynumber: 2.2 Consensus size: 27
14742479 GGAAGTATTG
* *
14742489 TACTGGTGGCTTTGCCACAATCACTGT
1 TACTGGTGGCTTGGCCACAATCACTAT
*
14742516 TACTGGTGGCTTGGCCACGTAT-ACTAT
1 TACTGGTGGCTTGGCCAC-AATCACTAT
14742543 TACTG
1 TACTG
14742548 CCAGCTTTGT
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
27 26 0.93
28 2 0.07
ACGTcount: A:0.19, C:0.24, G:0.24, T:0.34
Consensus pattern (27 bp):
TACTGGTGGCTTGGCCACAATCACTAT
Found at i:14742607 original size:32 final size:31
Alignment explanation
Indices: 14742564--14742753 Score: 218
Period size: 32 Copynumber: 6.0 Consensus size: 31
14742554 TTGTTGCGAT
14742564 GTTACTGATGGCTTTGTGCCGATCATATTATC
1 GTTACTGATGGCTTTGTGCCGATCATATTA-C
* *
14742596 GTTACTCATGGCTTTGTACCGATCATATTACC
1 GTTACTGATGGCTTTGTGCCGATCATATTA-C
*
14742628 GTTACTGATGGCTTTGTGTCGATCATATTAAC
1 GTTACTGATGGCTTTGTGCCGATCATATT-AC
* * **
14742660 ATTATTGATGATTTTGTGCCGATCATATTAC
1 GTTACTGATGGCTTTGTGCCGATCATATTAC
* * *
14742691 TGCTACTGATGGCTATGTGCCGATCATATCAC
1 -GTTACTGATGGCTTTGTGCCGATCATATTAC
* * *
14742723 TGTTACTGATGGGTTTGTTCCAATCATATTA
1 -GTTACTGATGGCTTTGTGCCGATCATATTA
14742754 TTGTACTTAT
Statistics
Matches: 132, Mismatches: 24, Indels: 4
0.82 0.15 0.03
Matches are distributed among these distances:
31 2 0.02
32 129 0.98
33 1 0.01
ACGTcount: A:0.22, C:0.18, G:0.19, T:0.40
Consensus pattern (31 bp):
GTTACTGATGGCTTTGTGCCGATCATATTAC
Found at i:14742733 original size:96 final size:96
Alignment explanation
Indices: 14742576--14742753 Score: 252
Period size: 96 Copynumber: 1.9 Consensus size: 96
14742566 TACTGATGGC
* * *
14742576 TTTGTGCCGATCATATTATCGTTACTCATGGCTTTGTACCGATCATATTACCGTTACTGATGGCT
1 TTTGTGCCGATCATATTATCGCTACTCATGGCTATGTACCGATCATATCACCGTTACTGATGGCT
*
14742641 TTGTGT-CGATCATATTAACATTATTGATGAT
66 TTGT-TCCAATCATATTAACATTATTGATGAT
* * * *
14742672 TTTGTGCCGATCATATTA-CTGCTACTGATGGCTATGTGCCGATCATATCACTGTTACTGATGGG
1 TTTGTGCCGATCATATTATC-GCTACTCATGGCTATGTACCGATCATATCACCGTTACTGATGGC
14742736 TTTGTTCCAATCATATTA
65 TTTGTTCCAATCATATTA
14742754 TTGTACTTAT
Statistics
Matches: 72, Mismatches: 8, Indels: 4
0.86 0.10 0.05
Matches are distributed among these distances:
95 2 0.03
96 70 0.97
ACGTcount: A:0.22, C:0.19, G:0.19, T:0.40
Consensus pattern (96 bp):
TTTGTGCCGATCATATTATCGCTACTCATGGCTATGTACCGATCATATCACCGTTACTGATGGCT
TTGTTCCAATCATATTAACATTATTGATGAT
Found at i:14742863 original size:26 final size:26
Alignment explanation
Indices: 14742827--14742877 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
14742817 CCATTCTGGC
* *
14742827 TACTGGCAGCTCTATTGTATTATTAA
1 TACTAGCAGCTCTACTGTATTATTAA
*
14742853 TACTAGCAGCTCTGCTGTATTATTA
1 TACTAGCAGCTCTACTGTATTATTA
14742878 CTGCTGGTAG
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.25, C:0.18, G:0.16, T:0.41
Consensus pattern (26 bp):
TACTAGCAGCTCTACTGTATTATTAA
Found at i:14742889 original size:26 final size:26
Alignment explanation
Indices: 14742842--14742895 Score: 63
Period size: 26 Copynumber: 2.1 Consensus size: 26
14742832 GCAGCTCTAT
*
14742842 TGTATTATTAATACTAGCAGCTCTGC
1 TGTATTATTAATACTAGCAGCTATGC
* * * *
14742868 TGTATTATTACTGCTGGTAGCTATGC
1 TGTATTATTAATACTAGCAGCTATGC
14742894 TG
1 TG
14742896 CGATATTGGT
Statistics
Matches: 23, Mismatches: 5, Indels: 0
0.82 0.18 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.22, C:0.17, G:0.20, T:0.41
Consensus pattern (26 bp):
TGTATTATTAATACTAGCAGCTATGC
Found at i:14745268 original size:55 final size:56
Alignment explanation
Indices: 14745183--14745298 Score: 207
Period size: 55 Copynumber: 2.1 Consensus size: 56
14745173 ACTCTTGTAA
* *
14745183 GAGTTAGTAGATTTTTTTTGGGGATTCAAATCAAGTTCTATAGGACTGCCAAGAAT
1 GAGTTAGTAGATTTTTTTTGGGGAATCAAATCAAGTTCTATAGGACCGCCAAGAAT
14745239 GAGTTAGTAGA-TTTTTTTGGGGAATCAAATCAAGTTCTATAGGACCGCCAAGAAT
1 GAGTTAGTAGATTTTTTTTGGGGAATCAAATCAAGTTCTATAGGACCGCCAAGAAT
14745294 GAGTT
1 GAGTT
14745299 CGTGTGCTAC
Statistics
Matches: 58, Mismatches: 2, Indels: 1
0.95 0.03 0.02
Matches are distributed among these distances:
55 47 0.81
56 11 0.19
ACGTcount: A:0.31, C:0.11, G:0.24, T:0.34
Consensus pattern (56 bp):
GAGTTAGTAGATTTTTTTTGGGGAATCAAATCAAGTTCTATAGGACCGCCAAGAAT
Found at i:14751138 original size:18 final size:19
Alignment explanation
Indices: 14751115--14751151 Score: 58
Period size: 18 Copynumber: 2.0 Consensus size: 19
14751105 GTAAAGATTA
14751115 AAAAATACTT-GAAATTTT
1 AAAAATACTTGGAAATTTT
*
14751133 AAAAATTCTTGGAAATTTT
1 AAAAATACTTGGAAATTTT
14751152 GCTTTACCCC
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
18 9 0.53
19 8 0.47
ACGTcount: A:0.46, C:0.05, G:0.08, T:0.41
Consensus pattern (19 bp):
AAAAATACTTGGAAATTTT
Found at i:14755973 original size:14 final size:14
Alignment explanation
Indices: 14755954--14755993 Score: 53
Period size: 14 Copynumber: 2.9 Consensus size: 14
14755944 TTGATTGGCA
14755954 GTAAAATGTTTTCC
1 GTAAAATGTTTTCC
* *
14755968 GTAAAATGATTTCT
1 GTAAAATGTTTTCC
*
14755982 GGAAAATGTTTT
1 GTAAAATGTTTT
14755994 ACTTTTCTGT
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
14 22 1.00
ACGTcount: A:0.33, C:0.07, G:0.17, T:0.42
Consensus pattern (14 bp):
GTAAAATGTTTTCC
Found at i:14756002 original size:20 final size:20
Alignment explanation
Indices: 14755977--14756016 Score: 62
Period size: 20 Copynumber: 2.0 Consensus size: 20
14755967 CGTAAAATGA
*
14755977 TTTCTGGAAAATGTTTTACT
1 TTTCTGGAAAATGATTTACT
*
14755997 TTTCTGTAAAATGATTTACT
1 TTTCTGGAAAATGATTTACT
14756017 GGAAAATATT
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
20 18 1.00
ACGTcount: A:0.28, C:0.10, G:0.12, T:0.50
Consensus pattern (20 bp):
TTTCTGGAAAATGATTTACT
Found at i:14756006 original size:34 final size:35
Alignment explanation
Indices: 14755962--14756028 Score: 109
Period size: 34 Copynumber: 1.9 Consensus size: 35
14755952 CAGTAAAATG
*
14755962 TTTTCCGTAAAATGATTT-CTGGAAAATGTTTTAC
1 TTTTCCGTAAAATGATTTACTGGAAAATATTTTAC
*
14755996 TTTTCTGTAAAATGATTTACTGGAAAATATTTT
1 TTTTCCGTAAAATGATTTACTGGAAAATATTTT
14756029 CTGGTGTTTG
Statistics
Matches: 30, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
34 17 0.57
35 13 0.43
ACGTcount: A:0.31, C:0.09, G:0.13, T:0.46
Consensus pattern (35 bp):
TTTTCCGTAAAATGATTTACTGGAAAATATTTTAC
Found at i:14756032 original size:14 final size:15
Alignment explanation
Indices: 14755956--14756032 Score: 52
Period size: 14 Copynumber: 5.0 Consensus size: 15
14755946 GATTGGCAGT
* *
14755956 AAAATG-TTTTCCGT
1 AAAATGATTTTCTGG
14755970 AAAATGA-TTTCTGG
1 AAAATGATTTTCTGG
*
14755984 AAAATGTTTTACTTTTCTGT
1 AAAATG----A-TTTTCTGG
*
14756004 AAAATGATTTACTGG
1 AAAATGATTTTCTGG
14756019 AAAAT-ATTTTCTGG
1 AAAATGATTTTCTGG
14756033 TGTTTGATTG
Statistics
Matches: 50, Mismatches: 6, Indels: 14
0.71 0.09 0.20
Matches are distributed among these distances:
14 25 0.50
15 11 0.22
16 1 0.02
18 1 0.02
20 12 0.24
ACGTcount: A:0.32, C:0.09, G:0.16, T:0.43
Consensus pattern (15 bp):
AAAATGATTTTCTGG
Found at i:14758963 original size:37 final size:37
Alignment explanation
Indices: 14758913--14758984 Score: 144
Period size: 37 Copynumber: 1.9 Consensus size: 37
14758903 CTTATTTTTT
14758913 CCATTAGATTAGAATTCACTAACTATTTAATTAATCA
1 CCATTAGATTAGAATTCACTAACTATTTAATTAATCA
14758950 CCATTAGATTAGAATTCACTAACTATTTAATTAAT
1 CCATTAGATTAGAATTCACTAACTATTTAATTAAT
14758985 TATGACCAGC
Statistics
Matches: 35, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
37 35 1.00
ACGTcount: A:0.40, C:0.15, G:0.06, T:0.39
Consensus pattern (37 bp):
CCATTAGATTAGAATTCACTAACTATTTAATTAATCA
Found at i:14760591 original size:44 final size:44
Alignment explanation
Indices: 14760528--14760633 Score: 167
Period size: 44 Copynumber: 2.4 Consensus size: 44
14760518 TGTAGGCTTT
* * *
14760528 CAAAAAATGCTCAAATCACCTAAACTCAAAATACTAAGTCATCC
1 CAAAACATGCTCATATCACCTAAACTCAAAATACCAAGTCATCC
*
14760572 CAAAACATGCTCATATCACCTAAACTCAAAATACCGAGTCATCC
1 CAAAACATGCTCATATCACCTAAACTCAAAATACCAAGTCATCC
14760616 CAAAACATGCTCAATATC
1 CAAAACATGCTC-ATATC
14760634 TCTACTTGTT
Statistics
Matches: 57, Mismatches: 4, Indels: 1
0.92 0.06 0.02
Matches are distributed among these distances:
44 52 0.91
45 5 0.09
ACGTcount: A:0.44, C:0.29, G:0.06, T:0.21
Consensus pattern (44 bp):
CAAAACATGCTCATATCACCTAAACTCAAAATACCAAGTCATCC
Found at i:14761972 original size:21 final size:22
Alignment explanation
Indices: 14761948--14761988 Score: 57
Period size: 21 Copynumber: 1.9 Consensus size: 22
14761938 AACTCCTGAA
*
14761948 AATAAATAACAAA-AATTAAAG
1 AATAAAAAACAAAGAATTAAAG
*
14761969 AATAAAAAATAAAGAATTAA
1 AATAAAAAACAAAGAATTAA
14761989 TTAGTAATGT
Statistics
Matches: 17, Mismatches: 2, Indels: 1
0.85 0.10 0.05
Matches are distributed among these distances:
21 11 0.65
22 6 0.35
ACGTcount: A:0.73, C:0.02, G:0.05, T:0.20
Consensus pattern (22 bp):
AATAAAAAACAAAGAATTAAAG
Found at i:14761985 original size:14 final size:14
Alignment explanation
Indices: 14761946--14761985 Score: 53
Period size: 14 Copynumber: 2.9 Consensus size: 14
14761936 TAAACTCCTG
* *
14761946 AAAATAAATAACAA
1 AAAATAAAGAATAA
*
14761960 AAATTAAAGAATAA
1 AAAATAAAGAATAA
14761974 AAAATAAAGAAT
1 AAAATAAAGAAT
14761986 TAATTAGTAA
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
14 22 1.00
ACGTcount: A:0.75, C:0.03, G:0.05, T:0.17
Consensus pattern (14 bp):
AAAATAAAGAATAA
Found at i:14762639 original size:21 final size:21
Alignment explanation
Indices: 14762613--14762653 Score: 82
Period size: 21 Copynumber: 2.0 Consensus size: 21
14762603 ATAATAGAGC
14762613 TCGTTAAAGTTATTATGAACT
1 TCGTTAAAGTTATTATGAACT
14762634 TCGTTAAAGTTATTATGAAC
1 TCGTTAAAGTTATTATGAAC
14762654 CTTTAATTTA
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.34, C:0.10, G:0.15, T:0.41
Consensus pattern (21 bp):
TCGTTAAAGTTATTATGAACT
Found at i:14765726 original size:50 final size:50
Alignment explanation
Indices: 14765592--14765830 Score: 194
Period size: 50 Copynumber: 4.7 Consensus size: 50
14765582 CATGCCAAAA
* ** * **
14765592 CCATGTCTCAGACATGGTCTTACATGGGATGTTTC-T-TGTACTGCCAATG
1 CCATGTCCCAGACATGGTCTTACATGGGACCTCTCATAT-TGGTGCCAATG
* * * ** *
14765641 CCATATCCCAGATATGATCTTACATGGGAGTTCTCATATTGGTGCCCATG
1 CCATGTCCCAGACATGGTCTTACATGGGACCTCTCATATTGGTGCCAATG
** * * **
14765691 CCATGTCCCAGACATGGTCTTACGGGGGACCTCTCATCTCGGTGCCAACA
1 CCATGTCCCAGACATGGTCTTACATGGGACCTCTCATATTGGTGCCAATG
* * **
14765741 CCATGTCCTAGACATGGTCTTACATGAGACCTCTCATAATCTCAATAATGCCAATG
1 CCATGTCCCAGACATGGTCTTACATGGGACCTCTCAT-A--T---TGGTGCCAATG
*
14765797 CCATGTCCCAGACATGGTCTTACATGGGATCTCT
1 CCATGTCCCAGACATGGTCTTACATGGGACCTCT
14765831 TTACCCAATT
Statistics
Matches: 147, Mismatches: 35, Indels: 9
0.77 0.18 0.05
Matches are distributed among these distances:
49 28 0.19
50 80 0.54
51 1 0.01
53 1 0.01
56 37 0.25
ACGTcount: A:0.23, C:0.27, G:0.20, T:0.29
Consensus pattern (50 bp):
CCATGTCCCAGACATGGTCTTACATGGGACCTCTCATATTGGTGCCAATG
Found at i:14773217 original size:50 final size:50
Alignment explanation
Indices: 14773157--14773347 Score: 184
Period size: 50 Copynumber: 3.7 Consensus size: 50
14773147 CTCATNNNNN
* * ** * *
14773157 GCCATATCCCAGATATGGTCTTACATGGGAGTTCTCATATCGGTGCCCAT
1 GCCATGTCCCAGACATGGTCTTACATGGGACCTCTCATATCGGTGCCAAC
** *
14773207 GCCATGTCCCAGACATGGTCTTACGGGGGACCTCTCATCTCGGTGCCAAC
1 GCCATGTCCCAGACATGGTCTTACATGGGACCTCTCATATCGGTGCCAAC
* * ** *
14773257 GCCATGTCCCAAACATGGTCTTACATGGAACCTCTCATAATCTCAATAATGCCAAT
1 GCCATGTCCCAGACATGGTCTTACATGGGACCTCTCAT-A--TC---GGTGCCAAC
* *
14773313 GCCATGTCCTAGACATGGTCTTACATGGGATCTCT
1 GCCATGTCCCAGACATGGTCTTACATGGGACCTCT
14773348 TTACCCAAAT
Statistics
Matches: 114, Mismatches: 21, Indels: 6
0.81 0.15 0.04
Matches are distributed among these distances:
50 75 0.66
53 2 0.02
56 37 0.32
ACGTcount: A:0.24, C:0.29, G:0.20, T:0.27
Consensus pattern (50 bp):
GCCATGTCCCAGACATGGTCTTACATGGGACCTCTCATATCGGTGCCAAC
Found at i:14795410 original size:21 final size:20
Alignment explanation
Indices: 14795370--14795410 Score: 55
Period size: 20 Copynumber: 2.0 Consensus size: 20
14795360 ATTATTTGAT
*
14795370 CCTTTAAATTGAATTTTTAA
1 CCTTTAAATCGAATTTTTAA
*
14795390 CCTTTAAATCGCATATTTTAA
1 CCTTTAAATCGAAT-TTTTAA
14795411 ATAAAAGTAA
Statistics
Matches: 18, Mismatches: 2, Indels: 1
0.86 0.10 0.05
Matches are distributed among these distances:
20 12 0.67
21 6 0.33
ACGTcount: A:0.34, C:0.15, G:0.05, T:0.46
Consensus pattern (20 bp):
CCTTTAAATCGAATTTTTAA
Found at i:14798365 original size:51 final size:50
Alignment explanation
Indices: 14798237--14798419 Score: 145
Period size: 51 Copynumber: 3.6 Consensus size: 50
14798227 AGTTGCTAGG
* * * *
14798237 TCACGTGTGTAGTACTATTTTCAGGCTACTACGTGTACCGGAATGATAGG
1 TCACGTGTGTAGTACTATATGCAGGCTACTACGCGTACCGGAATGATAGA
* * * * * *
14798287 TCACATGTGTAGTACTACATGTAGGCTACTATGCGTACC-GAATAGCTTCGA
1 TCACGTGTGTAGTACTATATGCAGGCTACTACGCGTACCGGAAT-G-ATAGA
* * * ** * *
14798338 TCACGTGTGTAGTATTATGTGCAGGCTACTACGTGTATTGG-ATGAAAATGG
1 TCACGTGTGTAGTACTATATGCAGGCTACTACGCGTACCGGAATG-ATA-GA
* *
14798389 TCACATGTGTAGTACTATGTGCAGGCTACTA
1 TCACGTGTGTAGTACTATATGCAGGCTACTA
14798420 TGTGAACCAT
Statistics
Matches: 103, Mismatches: 26, Indels: 7
0.76 0.19 0.05
Matches are distributed among these distances:
49 4 0.04
50 34 0.33
51 64 0.62
52 1 0.01
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (50 bp):
TCACGTGTGTAGTACTATATGCAGGCTACTACGCGTACCGGAATGATAGA
Found at i:14798421 original size:102 final size:101
Alignment explanation
Indices: 14798237--14798421 Score: 264
Period size: 101 Copynumber: 1.8 Consensus size: 101
14798227 AGTTGCTAGG
* * *
14798237 TCACGTGTGTAGTACTATTTTCAGGCTACTACGTGTACCGGAATGATAGGTCACATGTGTAGTAC
1 TCACGTGTGTAGTACTATGTGCAGGCTACTACGTGTACCGGAATGAAAGGTCACATGTGTAGTAC
*
14798302 TACATGTAGGCTACTATGCGTACCGAATAGCTTCGA
66 TACATGCAGGCTACTATGCGTACCGAATAGCTTCGA
* **
14798338 TCACGTGTGTAGTATTATGTGCAGGCTACTACGTGTATTGG-ATGAAAATGGTCACATGTGTAGT
1 TCACGTGTGTAGTACTATGTGCAGGCTACTACGTGTACCGGAATG-AAA-GGTCACATGTGTAGT
**
14798402 ACTATGTGCAGGCTACTATG
64 ACTACATGCAGGCTACTATG
14798422 TGAACCATGT
Statistics
Matches: 73, Mismatches: 9, Indels: 3
0.86 0.11 0.04
Matches are distributed among these distances:
100 3 0.04
101 38 0.52
102 32 0.44
ACGTcount: A:0.25, C:0.17, G:0.25, T:0.32
Consensus pattern (101 bp):
TCACGTGTGTAGTACTATGTGCAGGCTACTACGTGTACCGGAATGAAAGGTCACATGTGTAGTAC
TACATGCAGGCTACTATGCGTACCGAATAGCTTCGA
Found at i:14799159 original size:25 final size:25
Alignment explanation
Indices: 14799104--14799161 Score: 71
Period size: 25 Copynumber: 2.3 Consensus size: 25
14799094 ATTCAACTCA
* **
14799104 TCTTAGTTTAATTAATAAGTGTTTT
1 TCTTAATTTAATTAATAAGTGTTGC
* *
14799129 TTTTAATTTATTTAATAAGTGTTGC
1 TCTTAATTTAATTAATAAGTGTTGC
14799154 TCTTAATT
1 TCTTAATT
14799162 AATCTAGTTA
Statistics
Matches: 27, Mismatches: 6, Indels: 0
0.82 0.18 0.00
Matches are distributed among these distances:
25 27 1.00
ACGTcount: A:0.28, C:0.05, G:0.10, T:0.57
Consensus pattern (25 bp):
TCTTAATTTAATTAATAAGTGTTGC
Found at i:14805379 original size:24 final size:23
Alignment explanation
Indices: 14805307--14805380 Score: 60
Period size: 24 Copynumber: 3.0 Consensus size: 23
14805297 GTGAAGTTGC
14805307 TAGGTCACATGTGTAGTACTATG
1 TAGGTCACATGTGTAGTACTATG
****
14805330 TGCAGG-CTACTATGTGTACCGGTATG
1 T--AGGTC-AC-ATGTGTAGTACTATG
14805356 ATAGGTCACATGTGTAGTACTATG
1 -TAGGTCACATGTGTAGTACTATG
14805380 T
1 T
14805381 GCAGGCTACT
Statistics
Matches: 37, Mismatches: 8, Indels: 12
0.65 0.14 0.21
Matches are distributed among these distances:
23 2 0.05
24 12 0.32
25 10 0.27
26 12 0.32
27 1 0.03
ACGTcount: A:0.24, C:0.15, G:0.27, T:0.34
Consensus pattern (23 bp):
TAGGTCACATGTGTAGTACTATG
Found at i:14805382 original size:50 final size:50
Alignment explanation
Indices: 14805307--14805497 Score: 249
Period size: 51 Copynumber: 3.8 Consensus size: 50
14805297 GTGAAGTTGC
14805307 TAGGTCACATGTGTAGTACTATGTGCAGGCTACTATGTGTACCGGTATG-A
1 TAGGTCACATGTGTAGTACTATGTGCAGGCTACTATGTGTACCGG-ATGAA
* * **
14805357 TAGGTCACATGTGTAGTACTATGTGCAGGCTACTATGCGTACCGAATAGCT
1 TAGGTCACATGTGTAGTACTATGTGCAGGCTACTATGTGTACCGGAT-GAA
* * * * *
14805408 TCGATCACGTGTGTAGTACTATGTGCAGGCTACTACGTGTATCGGATGAA
1 TAGGTCACATGTGTAGTACTATGTGCAGGCTACTATGTGTACCGGATGAA
* *
14805458 AATGGTCACATGTGTAGTACTATGTGCAGGCTACTTTGTG
1 TA-GGTCACATGTGTAGTACTATGTGCAGGCTACTATGTG
14805498 AGCCGGGTAT
Statistics
Matches: 120, Mismatches: 18, Indels: 5
0.84 0.13 0.03
Matches are distributed among these distances:
49 2 0.02
50 45 0.38
51 73 0.61
ACGTcount: A:0.24, C:0.17, G:0.27, T:0.31
Consensus pattern (50 bp):
TAGGTCACATGTGTAGTACTATGTGCAGGCTACTATGTGTACCGGATGAA
Found at i:14813859 original size:17 final size:16
Alignment explanation
Indices: 14813794--14813896 Score: 77
Period size: 16 Copynumber: 6.3 Consensus size: 16
14813784 AGTACTTATC
*
14813794 GTTTTCACTA-TCTAGA
1 GTTTTCAC-AGTCTATA
14813810 GTTTTCACAGTCTATA
1 GTTTTCACAGTCTATA
*
14813826 ATTGTCTCA-AG-CTATA
1 GTT-T-TCACAGTCTATA
14813842 GCTTTTCACAGTCTATA
1 G-TTTTCACAGTCTATA
* * *
14813859 GTTGTCTCAATCTATA
1 GTTTTCACAGTCTATA
* *
14813875 GTTTTTGACATTCTATA
1 G-TTTTCACAGTCTATA
14813892 GTTTT
1 GTTTT
14813897 AAATCTAACG
Statistics
Matches: 70, Mismatches: 10, Indels: 14
0.74 0.11 0.15
Matches are distributed among these distances:
15 4 0.06
16 40 0.57
17 23 0.33
18 3 0.04
ACGTcount: A:0.24, C:0.17, G:0.13, T:0.46
Consensus pattern (16 bp):
GTTTTCACAGTCTATA
Found at i:14813892 original size:33 final size:32
Alignment explanation
Indices: 14813803--14813894 Score: 121
Period size: 33 Copynumber: 2.8 Consensus size: 32
14813793 CGTTTTCACT
* *
14813803 ATCTAGAGTTTTCACAGTCTATAATTGTCTCA
1 ATCTATAGTTTTCACAGTCTATAGTTGTCTCA
*
14813835 AGCTATAGCTTTTCACAGTCTATAGTTGTCTCA
1 ATCTATAG-TTTTCACAGTCTATAGTTGTCTCA
* *
14813868 ATCTATAGTTTTTGACATTCTATAGTT
1 ATCTATAG-TTTTCACAGTCTATAGTT
14813895 TTAAATCTAA
Statistics
Matches: 52, Mismatches: 7, Indels: 1
0.87 0.12 0.02
Matches are distributed among these distances:
32 6 0.12
33 46 0.88
ACGTcount: A:0.26, C:0.17, G:0.13, T:0.43
Consensus pattern (32 bp):
ATCTATAGTTTTCACAGTCTATAGTTGTCTCA
Found at i:14815045 original size:17 final size:19
Alignment explanation
Indices: 14815023--14815058 Score: 58
Period size: 17 Copynumber: 2.0 Consensus size: 19
14815013 ATGAACATGT
14815023 CGATGCATA-TTT-TAAAA
1 CGATGCATACTTTATAAAA
14815040 CGATGCATACTTTATAAAA
1 CGATGCATACTTTATAAAA
14815059 TTTCCTACCT
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
17 9 0.53
18 3 0.18
19 5 0.29
ACGTcount: A:0.42, C:0.14, G:0.11, T:0.33
Consensus pattern (19 bp):
CGATGCATACTTTATAAAA
Found at i:14815198 original size:48 final size:47
Alignment explanation
Indices: 14815128--14815218 Score: 128
Period size: 48 Copynumber: 1.9 Consensus size: 47
14815118 AACACACCAT
** * *
14815128 TTGTGGACAAGCCACCTTATAATTGCCGATAAACGACCAGATAACACA
1 TTGTGGACAAGCCACCACATAATTGCCAAT-AACGACCACATAACACA
*
14815176 TTGTGGACAAGCCACCACATAATTGCTAATAACGACCACATAA
1 TTGTGGACAAGCCACCACATAATTGCCAATAACGACCACATAA
14815219 TCGCAGATAA
Statistics
Matches: 38, Mismatches: 5, Indels: 1
0.86 0.11 0.02
Matches are distributed among these distances:
47 12 0.32
48 26 0.68
ACGTcount: A:0.38, C:0.25, G:0.15, T:0.21
Consensus pattern (47 bp):
TTGTGGACAAGCCACCACATAATTGCCAATAACGACCACATAACACA
Found at i:14815228 original size:21 final size:22
Alignment explanation
Indices: 14815189--14815240 Score: 63
Period size: 21 Copynumber: 2.4 Consensus size: 22
14815179 TGGACAAGCC
*
14815189 ACCACATAATTGCTAAT-AACG
1 ACCACATAATCGCTAATAAACG
*
14815210 ACCACATAATCGC-AGATAAACT
1 ACCACATAATCGCTA-ATAAACG
14815232 ACCACATAA
1 ACCACATAA
14815241 CTTCCACCTT
Statistics
Matches: 27, Mismatches: 2, Indels: 3
0.84 0.06 0.09
Matches are distributed among these distances:
20 1 0.04
21 14 0.52
22 12 0.44
ACGTcount: A:0.46, C:0.27, G:0.08, T:0.19
Consensus pattern (22 bp):
ACCACATAATCGCTAATAAACG
Found at i:14825249 original size:43 final size:43
Alignment explanation
Indices: 14825198--14825421 Score: 378
Period size: 43 Copynumber: 5.2 Consensus size: 43
14825188 GTGAAAAAAT
* *
14825198 GCCGCTAAAGAACATGACCTTTAGCGGCGTTTTACCCACAAAG
1 GCCGCTAAAGAACATGACCTTTAGCGGCGCTTTACCCACAAAC
14825241 GCCGCTAAAGAACATGACCTTTAGCGGCGCTTTACCCACAAAC
1 GCCGCTAAAGAACATGACCTTTAGCGGCGCTTTACCCACAAAC
14825284 GCCGCTAAAGAACATGACCTTTAGCGGCGCTTTACCCACAAAC
1 GCCGCTAAAGAACATGACCTTTAGCGGCGCTTTACCCACAAAC
*
14825327 GCCGCTAAAGAACATGACCTTTAGCGGCGCTTTACCCACAAAT
1 GCCGCTAAAGAACATGACCTTTAGCGGCGCTTTACCCACAAAC
* * *
14825370 GCCGCTAAAGAACATGATCTTTAGTGGCGCTTTTA-TCACAAAC
1 GCCGCTAAAGAACATGACCTTTAGCGGCGC-TTTACCCACAAAC
14825413 GCCGCTAAA
1 GCCGCTAAA
14825422 AGTACGGTTC
Statistics
Matches: 173, Mismatches: 7, Indels: 2
0.95 0.04 0.01
Matches are distributed among these distances:
43 169 0.98
44 4 0.02
ACGTcount: A:0.30, C:0.29, G:0.19, T:0.21
Consensus pattern (43 bp):
GCCGCTAAAGAACATGACCTTTAGCGGCGCTTTACCCACAAAC
Found at i:14835774 original size:86 final size:86
Alignment explanation
Indices: 14827180--14835772 Score: 16836
Period size: 86 Copynumber: 99.9 Consensus size: 86
14827170 TGCAAAATTC
14827180 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827245 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827266 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827331 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827352 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827417 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827438 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827503 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827524 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827589 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827610 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827675 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827696 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827761 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827782 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827847 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827868 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14827933 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14827954 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828019 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828040 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828105 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828126 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828191 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828212 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828277 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828298 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828363 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828384 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828449 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828470 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828535 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828556 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828621 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828642 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828707 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828728 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828793 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828814 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828879 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828900 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14828965 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14828986 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829051 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829072 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829137 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829158 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829223 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829244 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829309 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829330 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829395 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829416 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829481 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829502 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829567 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829588 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829653 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829674 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829739 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829760 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829825 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829846 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829911 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14829932 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14829997 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830018 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830083 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830104 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830169 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830190 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830255 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830276 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830341 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830362 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830427 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830448 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830513 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830534 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830599 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830620 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830685 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830706 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830771 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830792 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830857 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830878 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14830943 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14830964 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831029 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831050 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831115 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831136 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831201 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831222 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831287 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831308 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831373 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831394 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831459 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831480 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831545 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831566 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831631 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831652 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831717 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831738 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831803 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831824 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831889 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831910 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14831975 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14831996 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832061 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832082 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832147 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832168 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832233 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832254 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832319 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832340 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832405 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832426 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832491 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832512 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832577 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832598 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832663 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832684 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832749 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832770 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832835 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832856 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14832921 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14832942 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833007 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833028 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833093 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833114 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833179 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833200 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833265 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833286 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833351 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833372 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833437 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833458 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833523 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833544 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833609 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833630 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833695 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833716 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833781 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833802 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833867 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833888 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14833953 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14833974 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834039 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834060 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834125 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834146 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834211 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834232 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834297 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834318 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834383 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834404 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834469 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834490 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834555 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834576 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834641 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834662 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834727 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834748 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834813 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834834 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834899 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14834920 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14834985 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14835006 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14835071 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14835092 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14835157 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14835178 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14835243 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14835264 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14835329 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14835350 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14835415 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
14835436 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
14835501 CACAAACGCTGCTATAGACCA
66 CACAAACGCTGCTATAGACCA
* * * * * *
14835522 TGACCTTTCGTGGCGCTTTTACAACAAACGCCGCTATAGACCATGACCTTT-AGCGGCGCTTTTA
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCA-CGGCGCTTTTT
* *
14835586 CCACAAACGCCGCTGA-AGAACA
65 CCACAAACGCTGCT-ATAGACCA
* * * * * * * **
14835608 TGACCTTTAGCTGCACTTTACCCACAAACTCCGCTAAAGAACATGACCTTT-AGCGGCGCTTTAC
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCA-CGGCGCTTTTT
* * *
14835672 CCACAAACGCCGCTAAAGAACA
65 CCACAAACGCTGCTATAGACCA
* * * * * * * * *
14835694 TGACCTTTAGCGGCGCTTTACCCACAAATGCCGCTAAAGAACATGATCTTT-AGTGGCGCTTTTA
1 TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCA-CGGCGCTTTT-
*
14835758 T-CACAAACGCCGCTA
64 TCCACAAACGCTGCTA
14835773 AAAGTACGGT
Statistics
Matches: 8475, Mismatches: 28, Indels: 8
1.00 0.00 0.00
Matches are distributed among these distances:
85 2 0.00
86 8472 1.00
87 1 0.00
ACGTcount: A:0.25, C:0.35, G:0.15, T:0.26
Consensus pattern (86 bp):
TGACCTTTCGCGGCACTTTTCCCACAAACGCCACTATAGACCATGACCTTTCACGGCGCTTTTTC
CACAAACGCTGCTATAGACCA
Found at i:14837788 original size:12 final size:12
Alignment explanation
Indices: 14837767--14837795 Score: 51
Period size: 12 Copynumber: 2.5 Consensus size: 12
14837757 GAAAGTTATG
14837767 TAAG-TTATATA
1 TAAGTTTATATA
14837778 TAAGTTTATATA
1 TAAGTTTATATA
14837790 TAAGTT
1 TAAGTT
14837796 ATGTAAGTTA
Statistics
Matches: 17, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
11 4 0.24
12 13 0.76
ACGTcount: A:0.41, C:0.00, G:0.10, T:0.48
Consensus pattern (12 bp):
TAAGTTTATATA
Found at i:14842312 original size:19 final size:17
Alignment explanation
Indices: 14842276--14842325 Score: 75
Period size: 17 Copynumber: 3.0 Consensus size: 17
14842266 TAAATCCCAG
14842276 ATTT-TGATACCCATAT
1 ATTTCTGATACCCATAT
* *
14842292 TTTTCTGATACTCATAT
1 ATTTCTGATACCCATAT
14842309 ATTTCTGATACCCATAT
1 ATTTCTGATACCCATAT
14842326 CTTTGACTTT
Statistics
Matches: 29, Mismatches: 4, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
16 3 0.10
17 26 0.90
ACGTcount: A:0.28, C:0.20, G:0.06, T:0.46
Consensus pattern (17 bp):
ATTTCTGATACCCATAT
Found at i:14848152 original size:7 final size:7
Alignment explanation
Indices: 14848142--14848200 Score: 66
Period size: 7 Copynumber: 8.4 Consensus size: 7
14848132 CACTAACTCT
*
14848142 TAACCTC
1 TAACCCC
14848149 TAACCCC
1 TAACCCC
*
14848156 AAACCCC
1 TAACCCC
14848163 TAACCCC
1 TAACCCC
*
14848170 TAA-CCT
1 TAACCCC
14848176 TCAACCCC
1 T-AACCCC
*
14848184 TAACCAC
1 TAACCCC
14848191 TAACCCC
1 TAACCCC
14848198 TAA
1 TAA
14848201 ACATTATTTA
Statistics
Matches: 43, Mismatches: 7, Indels: 4
0.80 0.13 0.07
Matches are distributed among these distances:
6 3 0.07
7 37 0.86
8 3 0.07
ACGTcount: A:0.34, C:0.49, G:0.00, T:0.17
Consensus pattern (7 bp):
TAACCCC
Found at i:14848195 original size:28 final size:28
Alignment explanation
Indices: 14848132--14848200 Score: 86
Period size: 28 Copynumber: 2.5 Consensus size: 28
14848122 AACCTTAAAT
* *
14848132 CACTAACTCTTAACCTCTAACCCCAAAC
1 CACTAACCCCTAACCTCTAACCCCAAAC
* *
14848160 CCCTAACCCCTAACCT-TCAACCCCTAAC
1 CACTAACCCCTAACCTCT-AACCCCAAAC
14848188 CACTAACCCCTAA
1 CACTAACCCCTAA
14848201 ACATTATTTA
Statistics
Matches: 35, Mismatches: 5, Indels: 2
0.83 0.12 0.05
Matches are distributed among these distances:
27 1 0.03
28 34 0.97
ACGTcount: A:0.33, C:0.48, G:0.00, T:0.19
Consensus pattern (28 bp):
CACTAACCCCTAACCTCTAACCCCAAAC
Found at i:14848310 original size:21 final size:21
Alignment explanation
Indices: 14848286--14848339 Score: 67
Period size: 21 Copynumber: 2.6 Consensus size: 21
14848276 ATTCCTAACT
14848286 CTTAA-CCCTTAACCCCTAAAC
1 CTTAATCCC-TAACCCCTAAAC
*
14848307 CTTAAATCCC-AACCCTTAAAC
1 CTT-AATCCCTAACCCCTAAAC
14848328 CTTAATCCCTAA
1 CTTAATCCCTAA
14848340 ATCCATACTC
Statistics
Matches: 29, Mismatches: 1, Indels: 6
0.81 0.03 0.17
Matches are distributed among these distances:
20 6 0.21
21 18 0.62
22 2 0.07
23 3 0.10
ACGTcount: A:0.35, C:0.39, G:0.00, T:0.26
Consensus pattern (21 bp):
CTTAATCCCTAACCCCTAAAC
Found at i:14848320 original size:28 final size:28
Alignment explanation
Indices: 14848289--14848343 Score: 74
Period size: 28 Copynumber: 2.0 Consensus size: 28
14848279 CCTAACTCTT
* *
14848289 AACCCTTAACCCCTAAACCTTAAATCCC
1 AACCCTTAAACCCTAAACCCTAAATCCC
* *
14848317 AACCCTTAAACCTTAATCCCTAAATCC
1 AACCCTTAAACCCTAAACCCTAAATCC
14848344 ATACTCCCTA
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
28 23 1.00
ACGTcount: A:0.36, C:0.40, G:0.00, T:0.24
Consensus pattern (28 bp):
AACCCTTAAACCCTAAACCCTAAATCCC
Found at i:14848818 original size:41 final size:41
Alignment explanation
Indices: 14848704--14848941 Score: 262
Period size: 41 Copynumber: 5.8 Consensus size: 41
14848694 GAAAATGTTT
* * * * **
14848704 TTAGTGGCGCTTTTTCAAAAATGCCGCTAAAGCCCCCAGCA
1 TTAGCGGCGCTTTTTAAAAAACGCCGCTAAAACCCAGAGCA
* * * *
14848745 TTAGCGGCACGTTTTAAAAAAATGCCACTAAAACCCAGAGCA
1 TTAGCGGCGC-TTTTTAAAAAACGCCGCTAAAACCCAGAGCA
* * *
14848787 TTAGCGGCGTTTTTTAAAAAACACCGCTAAAACACAGAGCA
1 TTAGCGGCGCTTTTTAAAAAACGCCGCTAAAACCCAGAGCA
* * *
14848828 TTAGCGGCGCCTTTTCAAAAACGCCGCTAAAGCCCCA-AGCA
1 TTAGCGGCGCTTTTTAAAAAACGCCGCTAAA-ACCCAGAGCA
* *
14848869 TTAGCGGCACTATTTAAAAAACGCCGCTAAAACCCAGAGCA
1 TTAGCGGCGCTTTTTAAAAAACGCCGCTAAAACCCAGAGCA
* * *
14848910 CTAGCGGCACTTTTTAAAAAACGCTGCTAAAA
1 TTAGCGGCGCTTTTTAAAAAACGCCGCTAAAA
14848942 TATGGCTGCT
Statistics
Matches: 165, Mismatches: 29, Indels: 6
0.82 0.14 0.03
Matches are distributed among these distances:
40 4 0.02
41 125 0.76
42 36 0.22
ACGTcount: A:0.35, C:0.26, G:0.18, T:0.21
Consensus pattern (41 bp):
TTAGCGGCGCTTTTTAAAAAACGCCGCTAAAACCCAGAGCA
Found at i:14848930 original size:124 final size:124
Alignment explanation
Indices: 14848704--14848930 Score: 341
Period size: 124 Copynumber: 1.8 Consensus size: 124
14848694 GAAAATGTTT
* * * * *
14848704 TTAGTGGCGCTTTTTCAAAAATGCCGCTAAAGCCCCCAGCATTAGCGGCACGTTTTAAAAAAATG
1 TTAGCGGCGCCTTTTCAAAAACGCCGCTAAAGCCCCAAGCATTAGCGGCACGTTTTAAAAAAACG
* * *
14848769 CCACTAAAACCCAGAGCATTAGCGGCGTTTTTTAAAAAACACCGCTAAAACACAGAGCA
66 CCACTAAAACCCAGAGCACTAGCGGCCTTTTTAAAAAAACACCGCTAAAACACAGAGCA
14848828 TTAGCGGCGCCTTTTCAAAAACGCCGCTAAAGCCCCAAGCATTAGCGGCAC-TATTT-AAAAAAC
1 TTAGCGGCGCCTTTTCAAAAACGCCGCTAAAGCCCCAAGCATTAGCGGCACGT-TTTAAAAAAAC
*
14848891 GCCGCTAAAACCCAGAGCACTAGCGGCACTTTTTAAAAAA
65 GCCACTAAAACCCAGAGCACTAGCGGC-CTTTTTAAAAAA
14848931 CGCTGCTAAA
Statistics
Matches: 92, Mismatches: 9, Indels: 4
0.88 0.09 0.04
Matches are distributed among these distances:
123 32 0.35
124 60 0.65
ACGTcount: A:0.35, C:0.26, G:0.18, T:0.21
Consensus pattern (124 bp):
TTAGCGGCGCCTTTTCAAAAACGCCGCTAAAGCCCCAAGCATTAGCGGCACGTTTTAAAAAAACG
CCACTAAAACCCAGAGCACTAGCGGCCTTTTTAAAAAAACACCGCTAAAACACAGAGCA
Found at i:14849063 original size:41 final size:41
Alignment explanation
Indices: 14848960--14849074 Score: 128
Period size: 41 Copynumber: 2.9 Consensus size: 41
14848950 CTAAATTCCC
** ** *
14848960 AGCATTAGCGGCGCTTTTTCAAAAATACCGCT--A-CCCCG
1 AGCATTAGCAACGCTTTTTCAAAAACGCCGCTAAAGCCCCA
* *
14848998 AGCATTAGCAACGCTTCTTAAAAAACGCCGCTAAAGCCCCA
1 AGCATTAGCAACGCTTTTTCAAAAACGCCGCTAAAGCCCCA
* *
14849039 AGCATTAGCTACGGTTTTTCAAAAACGCCGCTAAAG
1 AGCATTAGCAACGCTTTTTCAAAAACGCCGCTAAAG
14849075 GCCCGATAAG
Statistics
Matches: 63, Mismatches: 11, Indels: 3
0.82 0.14 0.04
Matches are distributed among these distances:
38 26 0.41
40 1 0.02
41 36 0.57
ACGTcount: A:0.32, C:0.29, G:0.17, T:0.22
Consensus pattern (41 bp):
AGCATTAGCAACGCTTTTTCAAAAACGCCGCTAAAGCCCCA
Found at i:14849063 original size:133 final size:135
Alignment explanation
Indices: 14848824--14849073 Score: 310
Period size: 133 Copynumber: 1.9 Consensus size: 135
14848814 TAAAACACAG
* **
14848824 AGCATTAGCGGCGCCTTTTCAAAAACGCCGCTAAAGCCCCAAGCATTAGCGGCACTATTTAAAAA
1 AGCATTAGCGGCGCCTTTTCAAAAACACCGCT-AAGCCCCAAGCATTAGCAACACTATTTAAAAA
* *
14848889 ACGCCGCTAAAACCCAGAGCACTAGCGGCACTTTTTAAAAAACGCTGCTAAAATATGGCTGCTAA
65 ACGCCGCTAAAACCCAGAGCACTAGCGACACTTTTTAAAAAACGCCGCTAAAATATGGCTGCTAA
14848954 ATTCCC
130 ATTCCC
* * * *
14848960 AGCATTAGCGGCGCTTTTTCAAAAATACCGCT-A-CCCCGAGCATTAGCAACGCT-TCTTAAAAA
1 AGCATTAGCGGCGCCTTTTCAAAAACACCGCTAAGCCCCAAGCATTAGCAACACTAT-TTAAAAA
* * * ** *
14849022 ACGCCGCTAAAGCCCCA-AGCATTAGCTACGGTTTTTCAAAAACGCCGCTAAA
65 ACGCCGCTAAA-ACCCAGAGCACTAGCGACACTTTTTAAAAAACGCCGCTAAA
14849074 GGCCCGATAA
Statistics
Matches: 97, Mismatches: 15, Indels: 7
0.82 0.13 0.06
Matches are distributed among these distances:
132 1 0.01
133 62 0.64
134 5 0.05
136 29 0.30
ACGTcount: A:0.33, C:0.28, G:0.17, T:0.21
Consensus pattern (135 bp):
AGCATTAGCGGCGCCTTTTCAAAAACACCGCTAAGCCCCAAGCATTAGCAACACTATTTAAAAAA
CGCCGCTAAAACCCAGAGCACTAGCGACACTTTTTAAAAAACGCCGCTAAAATATGGCTGCTAAA
TTCCC
Found at i:14851715 original size:163 final size:162
Alignment explanation
Indices: 14851432--14851724 Score: 390
Period size: 163 Copynumber: 1.8 Consensus size: 162
14851422 TCATGTACAG
* * * *
14851432 TTTGCTTGATTAGTTGAAAGTGTAACAGTCTTATCTAAGATCGATTTGAGATCGAGGTATTATCA
1 TTTGCTTGATCAGTTGAAAGTGCAACAGTCTTATCTAAGATCAATTTGAGATCGAGGTATTACCA
* * *
14851497 ACTGAAGGTGAAAGACAATAACATGCCAAAAACAACATTCTGTACACAGTTTGGTCATTGATGAA
66 ACTGAAGGTGAAAGACAATAACATCCCAAAAACAACAATCTGTACACAGTTTGGTCACT-ATGAA
14851562 TGCACCTGTAACATTCATGGATCTCATGAACCA
130 TGCACCTGTAACATTCATGGATCTCATGAACCA
* * * *
14851595 TTTGTTTGATCAGTTGAAAGTGCATCAGTCTTATCTAAGATCAATTTGAGATGGAGGTGTTACCA
1 TTTGCTTGATCAGTTGAAAGTGCAACAGTCTTATCTAAGATCAATTTGAGATCGAGGTATTACCA
* * * ** * **
14851660 ACTGAAGGTGAAAGATAGTGAGGTCCCAAAAATAACAATCTGTAC-GTGATTTGGTCACTATGAA
66 ACTGAAGGTGAAAGACAATAACATCCCAAAAACAACAATCTGTACACAG-TTTGGTCACTATGAA
14851724 T
130 T
14851725 TTCTAATGAT
Statistics
Matches: 110, Mismatches: 19, Indels: 3
0.83 0.14 0.02
Matches are distributed among these distances:
162 7 0.06
163 103 0.94
ACGTcount: A:0.33, C:0.15, G:0.21, T:0.31
Consensus pattern (162 bp):
TTTGCTTGATCAGTTGAAAGTGCAACAGTCTTATCTAAGATCAATTTGAGATCGAGGTATTACCA
ACTGAAGGTGAAAGACAATAACATCCCAAAAACAACAATCTGTACACAGTTTGGTCACTATGAAT
GCACCTGTAACATTCATGGATCTCATGAACCA
Found at i:14857718 original size:45 final size:45
Alignment explanation
Indices: 14857667--14857752 Score: 154
Period size: 45 Copynumber: 1.9 Consensus size: 45
14857657 CTCGGTCGAT
*
14857667 TCAGCACATAGCAACCACTTTATTAATCAATGATGTCCGGTGGAA
1 TCAGCACATAGCAACCACTTTACTAATCAATGATGTCCGGTGGAA
*
14857712 TCAGCACATAGCAACCACTTTACTAATCAATGATGTTCGGT
1 TCAGCACATAGCAACCACTTTACTAATCAATGATGTCCGGT
14857753 TCACATAGTA
Statistics
Matches: 39, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
45 39 1.00
ACGTcount: A:0.33, C:0.23, G:0.16, T:0.28
Consensus pattern (45 bp):
TCAGCACATAGCAACCACTTTACTAATCAATGATGTCCGGTGGAA
Found at i:14857820 original size:38 final size:38
Alignment explanation
Indices: 14857770--14857850 Score: 128
Period size: 38 Copynumber: 2.2 Consensus size: 38
14857760 GTAGCCTGCA
14857770 CATAG-TACTACACACGTAATTGAAACTATCCGGTACG
1 CATAGTTACTACACACGTAATTGAAACTATCCGGTACG
* * *
14857807 CATAGTTACTACACACGTGATTGAAACTATCTGGTATG
1 CATAGTTACTACACACGTAATTGAAACTATCCGGTACG
14857845 CATAGT
1 CATAGT
14857851 AGCCTGCACA
Statistics
Matches: 40, Mismatches: 3, Indels: 1
0.91 0.07 0.02
Matches are distributed among these distances:
37 5 0.12
38 35 0.88
ACGTcount: A:0.33, C:0.21, G:0.17, T:0.28
Consensus pattern (38 bp):
CATAGTTACTACACACGTAATTGAAACTATCCGGTACG
Found at i:14857884 original size:51 final size:51
Alignment explanation
Indices: 14857807--14858021 Score: 249
Period size: 51 Copynumber: 4.5 Consensus size: 51
14857797 ATCCGGTACG
* *
14857807 CATAGTTACTACACACGTGATTGAAACTATCTGGTATGCATAGTAGCCTGCA
1 CATAG-TACTACACACGTGATTGAAACTATCCGGTACGCATAGTAGCCTGCA
* * *
14857859 CATAGTACTACACATGTGATCGAAACTATCCAGTACGCATAGTAGCCTGCA
1 CATAGTACTACACACGTGATTGAAACTATCCGGTACGCATAGTAGCCTGCA
*
14857910 CATAGTACTACACACGTAATTGAAACTATCCGGTACGCATAGT----T--A
1 CATAGTACTACACACGTGATTGAAACTATCCGGTACGCATAGTAGCCTGCA
* *
14857955 C----TAC-ACAC--GTGATTGAAACTATCTGGTATGCATAGTAGCCTGCA
1 CATAGTACTACACACGTGATTGAAACTATCCGGTACGCATAGTAGCCTGCA
*
14857999 CATAGTACTACACACGTAATTGA
1 CATAGTACTACACACGTGATTGA
14858022 CATGTGATCA
Statistics
Matches: 137, Mismatches: 13, Indels: 27
0.77 0.07 0.15
Matches are distributed among these distances:
38 25 0.18
40 4 0.03
41 3 0.02
42 1 0.01
44 2 0.01
45 2 0.01
47 1 0.01
48 3 0.02
49 4 0.03
51 87 0.64
52 5 0.04
ACGTcount: A:0.33, C:0.23, G:0.18, T:0.27
Consensus pattern (51 bp):
CATAGTACTACACACGTGATTGAAACTATCCGGTACGCATAGTAGCCTGCA
Found at i:14857957 original size:89 final size:88
Alignment explanation
Indices: 14857859--14858021 Score: 272
Period size: 89 Copynumber: 1.8 Consensus size: 88
14857849 GTAGCCTGCA
*
14857859 CATAGTACTACACATGTGATCGAAACTATCCAGTACGCATAGTAGCCTGCACATAGTACTACACA
1 CATAGTACTACACACGTGATCGAAACTATCCAGTACGCATAGTAGCCTGCACATAGTACTACACA
14857924 CGTAATTGAAACTATCCGGTACG
66 CGTAATTGAAACTATCCGGTACG
* ** *
14857947 CATAGTTACTACACACGTGATTGAAACTATCTGGTATGCATAGTAGCCTGCACATAGTACTACAC
1 CATAG-TACTACACACGTGATCGAAACTATCCAGTACGCATAGTAGCCTGCACATAGTACTACAC
14858012 ACGTAATTGA
65 ACGTAATTGA
14858022 CATGTGATCA
Statistics
Matches: 69, Mismatches: 5, Indels: 1
0.92 0.07 0.01
Matches are distributed among these distances:
88 5 0.07
89 64 0.93
ACGTcount: A:0.34, C:0.23, G:0.17, T:0.26
Consensus pattern (88 bp):
CATAGTACTACACACGTGATCGAAACTATCCAGTACGCATAGTAGCCTGCACATAGTACTACACA
CGTAATTGAAACTATCCGGTACG
Found at i:14857960 original size:38 final size:38
Alignment explanation
Indices: 14857910--14857990 Score: 128
Period size: 38 Copynumber: 2.2 Consensus size: 38
14857900 GTAGCCTGCA
14857910 CATAG-TACTACACACGTAATTGAAACTATCCGGTACG
1 CATAGTTACTACACACGTAATTGAAACTATCCGGTACG
* * *
14857947 CATAGTTACTACACACGTGATTGAAACTATCTGGTATG
1 CATAGTTACTACACACGTAATTGAAACTATCCGGTACG
14857985 CATAGT
1 CATAGT
14857991 AGCCTGCACA
Statistics
Matches: 40, Mismatches: 3, Indels: 1
0.91 0.07 0.02
Matches are distributed among these distances:
37 5 0.12
38 35 0.88
ACGTcount: A:0.33, C:0.21, G:0.17, T:0.28
Consensus pattern (38 bp):
CATAGTTACTACACACGTAATTGAAACTATCCGGTACG
Found at i:14858008 original size:140 final size:140
Alignment explanation
Indices: 14857756--14858012 Score: 514
Period size: 140 Copynumber: 1.8 Consensus size: 140
14857746 GTTCGGTTCA
14857756 CATAGTAGCCTGCACATAGTACTACACACGTAATTGAAACTATCCGGTACGCATAGTTACTACAC
1 CATAGTAGCCTGCACATAGTACTACACACGTAATTGAAACTATCCGGTACGCATAGTTACTACAC
14857821 ACGTGATTGAAACTATCTGGTATGCATAGTAGCCTGCACATAGTACTACACATGTGATCGAAACT
66 ACGTGATTGAAACTATCTGGTATGCATAGTAGCCTGCACATAGTACTACACATGTGATCGAAACT
14857886 ATCCAGTACG
131 ATCCAGTACG
14857896 CATAGTAGCCTGCACATAGTACTACACACGTAATTGAAACTATCCGGTACGCATAGTTACTACAC
1 CATAGTAGCCTGCACATAGTACTACACACGTAATTGAAACTATCCGGTACGCATAGTTACTACAC
14857961 ACGTGATTGAAACTATCTGGTATGCATAGTAGCCTGCACATAGTACTACACA
66 ACGTGATTGAAACTATCTGGTATGCATAGTAGCCTGCACATAGTACTACACA
14858013 CGTAATTGAC
Statistics
Matches: 117, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
140 117 1.00
ACGTcount: A:0.33, C:0.24, G:0.18, T:0.26
Consensus pattern (140 bp):
CATAGTAGCCTGCACATAGTACTACACACGTAATTGAAACTATCCGGTACGCATAGTTACTACAC
ACGTGATTGAAACTATCTGGTATGCATAGTAGCCTGCACATAGTACTACACATGTGATCGAAACT
ATCCAGTACG
Done.