Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold528
Parameters: 2 7 7 80 10 50 1000
Length:  91176

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1304--1347
5
9.2
5
81
18
58
40
0
0
59
0.98
1305--1347
19
2.3
19
92
8
70
41
0
0
58
0.98
1357--1398
15
2.7
15
88
3
57
73
2
19
4
1.12
1448--1475
4
7.0
4
100
0
56
75
0
25
0
0.81
8304--8355
24
2.2
24
89
0
77
55
9
1
32
1.43
13534--13591
30
1.9
30
89
0
89
41
3
24
31
1.71
13803--13834
13
2.5
13
94
0
55
31
0
12
56
1.37
16287--16333
7
7.1
7
83
9
55
10
51
0
38
1.37
17138--17194
28
2.0
29
82
3
71
50
3
17
28
1.62
17460--17484
8
3.1
8
100
0
50
28
12
36
24
1.91
19521--19650
24
5.5
23
70
5
98
26
20
14
38
1.91
19504--19663
23
6.8
24
70
10
114
29
18
14
38
1.90
19504--19650
47
3.1
47
90
2
222
27
19
14
38
1.90
25306--25364
3
20.0
3
72
10
50
66
1
3
28
1.18
26583--26630
19
2.3
21
75
17
55
56
2
0
41
1.11
26579--26622
19
2.3
19
84
0
61
59
2
0
38
1.10
27318--27461
73
2.0
73
86
2
200
32
15
13
38
1.87
28164--28240
31
2.5
31
91
4
120
20
16
9
53
1.70
47216--47262
23
2.0
23
100
0
94
42
8
10
38
1.70
58258--58301
3
14.7
3
100
0
88
68
0
0
31
0.90
71930--71975
20
2.3
20
85
3
58
56
6
4
32
1.45
75308--75366
29
2.0
30
83
9
77
47
15
8
28
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77154--77197
23
1.9
23
90
0
70
31
2
4
61
1.28
79696--79744
16
3.0
16
77
14
55
22
0
4
73
1.00
80385--80441
29
2.0
29
82
0
69
61
0
0
38
0.96

Tables:   1

The End!