Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold601
Parameters: 2 7 7 80 10 50 1000
Length:  46391

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2047--2084
20
1.9
19
89
5
58
31
13
28
26
1.93
4089--4149
30
2.0
30
87
0
86
18
22
1
57
1.49
5201--5241
11
3.7
11
86
0
64
24
7
2
65
1.30
31039--31194
33
4.6
34
68
25
105
34
25
19
20
1.96
30932--31301
104
3.6
104
92
2
577
31
28
20
20
1.97
37741--38252
258
2.0
249
90
9
877
26
22
22
27
1.98
43100--43247
72
2.0
73
83
6
185
26
15
28
29
1.96
43100--43270
72
2.4
73
77
8
172
28
15
28
28
1.96
45427--45486
18
3.2
18
78
7
66
71
3
18
6
1.22

Tables:   1

The End!