Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold712
Parameters: 2 7 7 80 10 50 1000
Length:  9023

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1042--1068
4
6.8
4
100
0
54
77
0
0
22
0.76
1693--1918
44
5.2
44
71
13
180
27
26
17
28
1.98
1921--2103
95
1.9
95
92
4
307
30
20
18
31
1.96
2212--2439
44
5.2
44
68
12
171
25
25
24
25
2.00
2180--2407
44
5.2
45
67
10
155
22
23
25
28
1.99
2118--3082
87
11.1
87
94
0
1359
23
25
24
26
2.00
4059--4103
15
3.0
15
87
9
65
13
13
0
73
1.10
4068--4115
9
5.6
9
87
12
66
10
12
0
77
1.00
4059--4113
24
2.3
24
90
6
85
12
14
0
72
1.12
4961--5039
9
8.6
9
83
10
90
12
0
10
77
1.00
4967--5037
8
8.9
8
81
9
65
11
0
8
80
0.91
5798--6506
352
2.0
353
99
0
1402
33
19
15
30
1.93

Tables:   1

The End!