Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold581
Parameters: 2 7 7 80 10 50 1000
Length:  29674

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5493--5580
4
22.0
4
76
13
56
64
0
9
26
1.23
5457--5580
8
15.4
8
69
15
60
66
0
10
23
1.23
5457--5580
12
10.2
12
68
16
60
66
0
10
23
1.23
9648--9715
10
6.4
10
74
19
50
29
0
4
66
1.11
17948--18006
16
3.5
18
73
15
54
42
0
0
57
0.98
17973--18000
6
4.7
6
100
0
56
32
0
0
67
0.91
26187--26251
21
3.1
21
71
18
64
53
0
7
38
1.30
26482--26523
21
2.0
20
86
4
57
69
4
0
26
1.08
28064--28407
174
2.0
175
86
4
489
27
24
19
27
1.99
28450--28916
50
9.4
50
71
3
348
25
24
19
30
1.98
28466--28980
100
5.2
100
92
1
793
25
23
20
30
1.98

Tables:   1

The End!