Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_106 ID=scaffold_106-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  14323

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1337--1382
23
2.0
23
100
0
92
13
8
43
34
1.74
3335--3374
20
2.0
20
100
0
80
30
25
15
30
1.95
11501--11661
44
3.6
45
77
4
137
31
18
25
24
1.98
11517--11688
88
2.0
88
88
0
254
29
18
26
25
1.98
11542--11688
44
3.3
44
77
3
170
32
15
27
24
1.95
11528--11731
88
2.3
88
82
2
221
29
17
27
25
1.97
13991--14021
12
2.6
12
94
0
53
48
9
0
41
1.36
13991--14021
14
2.2
14
94
0
53
48
9
0
41
1.36

Tables:   1

The End!