Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_113 ID=scaffold_113-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  13884

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--220
61
3.0
61
87
5
239
49
22
0
27
1.54
120--197
38
2.1
37
82
2
93
50
23
0
26
1.50
52--321
107
2.5
110
83
8
329
50
22
0
27
1.52
162--313
45
3.3
45
79
11
184
48
25
0
26
1.51
34--322
23
13.0
22
74
15
177
49
22
0
27
1.52
157--311
68
2.2
68
84
8
199
49
24
0
26
1.51
4381--4413
13
2.5
13
100
0
66
15
27
27
30
1.96
5172--5225
26
2.2
24
83
6
63
27
3
1
66
1.19
7189--7215
14
1.9
14
100
0
54
29
14
22
33
1.94
8702--8801
48
2.1
48
92
5
168
31
16
8
45
1.76
13798--13884
23
3.8
23
72
14
90
48
22
1
27
1.58

Tables:   1

The End!