Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_119 ID=scaffold_119-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  12265

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
998--1168
87
2.0
87
83
6
222
40
21
14
24
1.90
6831--6885
20
2.7
20
89
10
85
34
12
12
40
1.82
6850--6930
38
2.1
38
84
4
101
40
9
7
41
1.66
6934--7008
36
2.1
37
87
7
109
48
13
13
25
1.79
6942--7015
19
3.9
21
70
24
65
41
12
12
33
1.79
7143--7170
5
5.6
5
100
0
56
64
0
0
35
0.94
7344--7388
18
2.6
18
82
3
65
0
17
0
82
0.68
7701--7752
3
15.7
3
84
15
59
0
36
0
63
0.95
7701--7752
10
5.5
10
74
21
58
0
36
0
63
0.95
7709--7752
16
2.6
17
89
7
63
0
36
0
63
0.95
8097--8201
29
3.6
29
84
8
122
40
4
18
36
1.71
8107--8222
29
3.9
29
82
8
108
38
4
20
36
1.73
8240--8279
20
2.0
20
95
0
71
42
0
0
57
0.98
8427--8859
82
5.6
79
90
6
583
37
18
15
27
1.92

Tables:   1

The End!