Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_130 ID=scaffold_130-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  11826

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67--100
5
6.6
5
86
6
50
14
2
0
82
0.79
66--100
11
3.3
11
88
8
54
14
2
0
82
0.77
66--107
21
2.0
21
85
0
57
14
4
2
78
1.01
936--978
13
3.5
12
87
12
61
34
0
2
62
1.08
4746--4785
20
2.0
20
90
0
62
32
22
12
32
1.91
6824--6860
9
4.1
9
92
0
65
29
10
13
45
1.77
6913--6943
9
3.4
9
90
0
53
38
22
12
25
1.90
7928--7968
19
2.2
19
91
8
66
12
9
7
70
1.33
8901--8942
7
6.0
7
80
8
50
69
2
14
14
1.30
8901--8942
13
3.0
14
82
10
50
69
2
14
14
1.30
8887--8942
20
2.7
20
80
8
58
66
3
16
14
1.39
9025--9125
42
2.4
42
91
0
157
34
12
24
27
1.92
10348--10813
45
10.4
45
73
6
351
31
18
23
27
1.97
10348--10832
89
5.5
89
90
2
692
31
17
23
27
1.97
11753--11786
5
6.6
5
86
6
50
14
2
0
82
0.79
11752--11786
11
3.3
11
88
8
54
14
2
0
82
0.77
11752--11793
21
2.0
21
85
0
57
14
4
2
78
1.01

Tables:   1

The End!