Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_164 ID=scaffold_164-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  10427

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1828--2084
139
1.8
139
90
1
417
35
7
16
40
1.78
2214--2290
6
10.4
8
80
18
55
83
2
6
7
0.90
2205--2290
9
10.1
9
77
11
67
81
2
8
8
0.96
2231--2285
1
55.0
1
83
0
56
89
1
3
5
0.66
2213--2281
31
2.2
31
97
0
129
84
2
5
7
0.87
3987--4862
372
2.4
370
82
6
916
29
13
23
33
1.93
3987--4772
186
4.2
186
86
4
955
29
12
23
33
1.92
4997--5482
185
2.6
183
80
5
514
35
15
16
33
1.89
9215--9316
52
2.0
52
90
0
159
17
26
25
30
1.97
9447--10417
122
7.9
122
92
1
1495
32
17
15
33
1.92

Tables:   1

The End!