Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_166 ID=scaffold_166-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  10246

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4479--4519
20
2.0
20
100
0
82
43
14
14
26
1.84
7726--7797
13
5.7
13
72
27
66
25
2
0
72
0.98
7716--7798
21
3.8
22
77
13
75
22
2
1
73
1.02
7736--7798
4
15.5
4
74
23
53
23
3
0
73
0.98
7961--8003
22
2.0
22
85
0
59
23
46
9
20
1.79
8942--9135
101
1.9
101
86
6
273
30
16
24
28
1.96

Tables:   1

The End!