Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_182 ID=scaffold_182-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  10371

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1242--1280
10
3.9
10
89
0
60
71
2
0
25
0.98
1240--1292
22
2.4
21
74
17
54
75
1
0
22
0.90
2095--2475
44
8.8
44
69
7
172
26
22
21
29
1.99
2088--2478
217
1.8
217
90
1
631
26
22
21
29
1.99
2225--2391
88
1.9
88
82
2
210
25
24
19
30
1.98
2317--2495
44
4.1
44
68
12
118
25
24
22
27
2.00
2515--2697
51
3.7
49
74
3
150
25
21
21
31
1.98
2488--2969
100
4.8
99
80
4
450
26
21
21
30
1.98
2487--2957
50
9.4
50
70
7
240
26
21
21
31
1.98
2487--2969
201
2.4
200
76
5
488
26
21
21
31
1.98
4540--4569
12
2.4
13
94
5
53
0
13
0
86
0.57
7390--7441
19
2.7
20
82
5
63
46
11
17
25
1.81

Tables:   1

The End!