Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_183 ID=scaffold_183-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9800

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
111--151
20
2.0
21
86
13
59
63
0
9
26
1.25
158--204
14
3.3
14
81
3
58
76
2
0
21
0.89
119--292
13
13.5
13
67
24
61
66
2
4
27
1.21
920--950
11
2.7
12
90
10
55
35
0
6
58
1.24
1683--2250
44
12.5
43
69
16
231
28
20
19
31
1.97
1587--2253
319
2.1
316
83
5
833
28
19
19
32
1.96
2425--2602
44
4.0
44
70
15
132
26
22
19
31
1.97
2463--2588
45
2.8
44
78
8
130
26
24
19
29
1.99
3823--3872
16
3.2
16
73
23
52
8
18
0
74
1.06
3831--3892
23
2.5
24
79
15
72
8
16
0
75
1.02
9315--9355
20
2.0
21
86
13
59
63
0
9
26
1.25
9418--9492
3
25.7
3
77
20
54
65
0
6
28
1.18
9460--9490
13
2.4
13
94
0
53
74
0
0
25
0.82
9422--9492
10
6.6
10
73
17
54
66
0
7
26
1.17

Tables:   1

The End!