Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_186 ID=scaffold_186-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9743

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420--526
19
5.8
19
89
4
159
37
15
8
38
1.78
435--526
38
2.4
38
98
0
175
38
15
8
38
1.78
1375--1661
128
2.2
128
86
1
405
28
19
20
31
1.97
1158--2570
44
32.8
43
68
11
448
27
21
20
30
1.98
1162--2568
345
4.1
345
94
0
2420
27
21
20
30
1.98
1720--2006
128
2.2
128
90
1
468
27
20
21
29
1.98
2065--2351
128
2.2
128
87
0
403
27
20
20
30
1.98
2529--2640
50
2.2
50
82
0
125
27
23
18
30
1.98
2722--2843
44
2.8
44
85
9
169
27
26
18
27
1.98
2843--3331
88
5.6
88
93
0
800
20
24
28
26
1.99

Tables:   1

The End!