Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_189 ID=scaffold_189-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  41125

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
595--623
2
14.5
2
100
0
58
51
0
0
48
1.00
890--928
19
2.1
19
85
9
53
66
7
7
17
1.40
2142--2800
98
6.7
98
92
0
1084
21
22
25
30
1.98
37186--37222
11
3.4
11
96
0
65
54
5
2
37
1.38
37307--37347
13
2.8
15
82
14
50
34
2
19
43
1.64
37321--37384
16
3.9
16
80
8
65
32
1
15
50
1.54
38810--38846
11
3.4
11
88
0
56
51
5
2
40
1.39
40309--40360
27
1.9
27
88
0
77
50
9
0
40
1.35
40428--40468
12
3.6
11
87
12
57
43
9
0
46
1.36
40430--40468
10
3.7
10
83
12
51
43
10
0
46
1.37

Tables:   1

The End!