Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_190 ID=scaffold_190-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9650

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1234--1345
40
2.8
40
82
4
138
33
25
22
17
1.96
1407--1518
41
2.7
41
92
1
188
25
22
23
28
1.99
1923--1956
14
2.3
15
90
5
52
35
0
29
35
1.58
2044--2217
88
2.0
89
89
3
271
25
0
29
43
1.59
2193--2226
7
4.9
7
85
0
50
11
0
52
35
1.38
3071--3360
146
2.0
143
88
6
424
40
15
13
30
1.86
3369--3434
22
3.0
22
82
2
80
25
46
1
25
1.61
6992--7295
43
7.1
43
89
0
448
22
19
35
23
1.96
7392--7434
22
2.0
22
90
0
68
41
25
20
11
1.86

Tables:   1

The End!