Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_209 ID=scaffold_209-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9303

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
896--1008
44
2.6
44
77
2
120
19
28
19
32
1.96
1185--1320
43
3.2
43
64
15
118
22
22
26
29
1.99
1113--1934
86
9.5
86
93
0
1338
23
23
23
29
1.99
1228--1363
43
3.2
43
63
15
100
25
25
23
26
2.00
1357--1492
43
3.2
42
66
15
107
22
22
26
29
1.99
4091--4153
32
2.0
32
84
6
83
7
11
12
68
1.40
8957--8983
2
13.5
2
100
0
54
51
0
0
48
1.00
9012--9061
24
2.2
23
85
7
66
54
8
4
34
1.49

Tables:   1

The End!