Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_227 ID=scaffold_227-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9754

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1642--1676
18
1.9
18
88
0
52
37
14
2
45
1.59
3762--3806
19
2.3
20
75
20
51
26
22
8
42
1.83
6551--6683
46
2.9
46
83
2
171
40
18
27
14
1.89
8000--8321
50
6.4
50
68
4
202
31
20
22
24
1.98
8000--8397
100
4.0
100
90
0
600
30
21
23
24
1.99
8000--8396
200
2.0
200
92
1
661
30
21
23
24
1.99
8550--8723
89
2.0
89
80
2
197
29
16
24
29
1.97
8573--8781
44
4.7
44
70
10
131
30
16
22
30
1.96

Tables:   1

The End!