Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_229 ID=scaffold_229-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9169

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5927--6530
50
12.2
50
73
4
434
30
21
21
25
1.98
5905--6504
100
6.1
100
85
1
742
29
22
21
26
1.99
5916--6447
195
2.7
197
87
1
744
30
21
21
25
1.98
5927--6530
150
4.1
150
74
5
544
30
21
21
25
1.98
6522--6876
44
7.9
45
70
9
197
29
17
23
29
1.97
6617--6926
96
3.3
95
71
14
297
30
16
21
32
1.95
6586--7013
181
2.4
181
89
1
644
29
17
21
31
1.96
7152--7285
44
3.0
44
80
1
133
38
22
14
24
1.92
7322--7406
44
1.9
44
85
4
118
32
18
21
27
1.97
7451--7608
44
3.6
43
83
6
167
28
18
24
29
1.98

Tables:   1

The End!