Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_233 ID=scaffold_233-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9234

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1044--1086
23
2.0
22
90
9
70
30
6
4
58
1.45
1600--1641
19
2.2
20
82
4
50
30
7
11
50
1.66
6652--7204
88
6.3
88
88
0
777
28
28
23
19
1.98
7218--7593
44
8.7
44
82
7
439
27
18
26
28
1.98
7345--7423
38
2.1
38
83
4
97
34
16
24
25
1.95
7218--7593
126
2.9
129
83
7
465
27
18
26
28
1.98
7218--7547
170
1.9
170
87
3
477
27
17
25
28
1.98

Tables:   1

The End!