Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_272 ID=scaffold_272-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9590

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4682--4725
10
4.5
10
80
2
54
81
0
11
6
0.86
4682--4731
19
2.6
19
83
3
64
82
0
12
6
0.85
5066--5360
103
2.8
108
81
6
386
27
15
8
48
1.74
6254--6809
46
12.1
46
94
0
941
28
16
26
28
1.97
7631--7925
46
6.4
46
88
1
421
26
15
26
31
1.95
7890--7980
44
2.1
41
76
18
96
28
18
27
25
1.98
7906--8020
44
2.6
44
82
5
117
30
18
24
26
1.98

Tables:   1

The End!