Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_273 ID=scaffold_273-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9773

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5444--5548
42
2.5
42
80
9
115
72
4
12
10
1.26
7188--8071
86
10.2
86
92
1
1149
28
21
24
25
1.99
7188--8433
172
7.3
172
85
7
1200
28
21
24
25
1.99
7801--8027
44
5.2
44
68
16
191
24
22
26
27
2.00
7755--8071
44
7.2
44
67
13
177
26
23
24
25
2.00
8002--8143
70
2.0
70
94
0
248
31
23
21
23
1.98
7753--8392
334
1.9
334
91
1
1050
27
22
24
25
2.00
8135--8361
44
5.2
44
68
16
137
25
23
25
26
2.00
7913--8392
158
2.9
162
86
5
644
27
22
24
24
2.00
8072--8425
88
4.0
88
90
1
543
26
22
25
25
2.00
7826--8318
246
2.0
246
93
0
833
27
22
24
24
2.00
8439--8551
44
2.6
44
76
5
104
30
18
21
30
1.97

Tables:   1

The End!